ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108690:Os12g0556400 94 9e-20
2AK062903:Os12g0556400 94 9e-20
3AK111355:Os08g0272000 83 1e-16
4Os07g0244600:Os07g0244600 30 0.93
5AK107384:Os08g0458600 30 1.2
6AK066276:Os12g0597300 29 2.1
7Os09g0540900:Os09g0540900 27 7.9

>AK108690:Os12g0556400 |
          Length = 111
 Score = 93.6 bits (231), Expect = 9e-20
 Identities = 44/65 (67%), Positives = 48/65 (73%)
 Frame = +3

Query: 126 FRARIDHVLYSGEKKHXXXXXXXXXXXXXXPWYLMTRGAKHDSHQDYVERANKARSDRLS 305
           FRAR++H LYSGEKKH              PWYLMTRGAKH SHQDY+ERANKARS+RLS
Sbjct: 43  FRARVEHYLYSGEKKHVVAGIAIFAAIFGVPWYLMTRGAKHQSHQDYMERANKARSERLS 102

Query: 306 SGQPS 320
           SGQ S
Sbjct: 103 SGQAS 107



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>AK062903:Os12g0556400 |
          Length = 111

 Score = 93.6 bits (231), Expect = 9e-20
 Identities = 44/65 (67%), Positives = 48/65 (73%)
 Frame = +3

Query: 126 FRARIDHVLYSGEKKHXXXXXXXXXXXXXXPWYLMTRGAKHDSHQDYVERANKARSDRLS 305
           FRAR++H LYSGEKKH              PWYLMTRGAKH SHQDY+ERANKARS+RLS
Sbjct: 43  FRARVEHYLYSGEKKHVVAGIAIFAAIFGVPWYLMTRGAKHQSHQDYMERANKARSERLS 102

Query: 306 SGQPS 320
           SGQ S
Sbjct: 103 SGQAS 107



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>AK111355:Os08g0272000 |
          Length = 80

 Score = 83.2 bits (204), Expect = 1e-16
 Identities = 38/65 (58%), Positives = 45/65 (69%)
 Frame = +3

Query: 126 FRARIDHVLYSGEKKHXXXXXXXXXXXXXXPWYLMTRGAKHDSHQDYVERANKARSDRLS 305
           FR R+++ LYSGEKKH              PWY M+RG KH SHQDY+E+ANKARS+RLS
Sbjct: 12  FRRRLEYYLYSGEKKHVVAGIAIFAAIFGVPWYFMSRGTKHQSHQDYMEKANKARSERLS 71

Query: 306 SGQPS 320
           SGQ S
Sbjct: 72  SGQSS 76



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>Os07g0244600:Os07g0244600 |
          Length = 320

 Score = 30.4 bits (67), Expect = 0.93
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 235 EGQSMTLIKIMWSELTRRGRIGFLLDSHH 321
           +GQ  T+I  MWSEL R GRI   L  +H
Sbjct: 39  DGQVSTMIVRMWSELARTGRISDGLPINH 67



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>AK107384:Os08g0458600 |
          Length = 614

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -3

Query: 305 RKPIRPRLVSSLHIILMRVMLCPSGH---EVPGNPENGGEDGDACDDVLLLSAVQ 150
           RKP+ P +++ L  ++   M C        V  N   GGED D  DDV+++   Q
Sbjct: 123 RKPLNPTVMARLWRVVAWRMYCLEERIQANVAANAGAGGEDDDDDDDVVIVEEPQ 177



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>AK066276:Os12g0597300 |
          Length = 749

 Score = 29.3 bits (64), Expect = 2.1
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 11/41 (26%)
 Frame = -1

Query: 400 LQIHNANCICRGWAIWG-----------RLRQLLHSFSDGC 311
           + I N  C+CRGW ++G             RQ +H +++ C
Sbjct: 620 VDIRNRCCLCRGWQLYGVPCAHGVAALLSCRQNVHRYTESC 660



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>Os09g0540900:Os09g0540900 |
          Length = 574

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 580 CNKNIMICCPSSPPRIAKKTTMRFPRT 500
           C   + + CP+SP ++ K  + R PRT
Sbjct: 544 CGCGLFVMCPTSPTQLNKAPSPRRPRT 570


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 15,073,777
Number of extensions: 306151
Number of successful extensions: 615
Number of sequences better than 10.0: 7
Number of HSP's gapped: 615
Number of HSP's successfully gapped: 7
Length of query: 200
Length of database: 15,399,855
Length adjustment: 96
Effective length of query: 104
Effective length of database: 11,555,919
Effective search space: 1201815576
Effective search space used: 1201815576
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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