ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|CT829922.1| Oryza sativa (indica cultivar-group) cDNA clone:... 220 4e-54
2ref|NM_001073535.1| Oryza sativa (japonica cultivar-group) Os12g... 220 4e-54
3dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
4dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
5ref|NM_001067960.1| Oryza sativa (japonica cultivar-group) Os08g... 198 2e-47
6dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 2e-47
7gb|AY111250.1| Zea mays CL14815_1 mRNA sequence 141 3e-30
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
9emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
11dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
12dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
13emb|CT987417.1| partial cDNA sequence from a Lambda ZAP II norma... 74 6e-10
14emb|CT983352.1| partial cDNA sequence from a Lambda ZAP II norma... 74 6e-10
15emb|CT986659.1| partial cDNA sequence from a Lambda ZAP II norma... 68 4e-08
16emb|CT985849.1| partial cDNA sequence from a Lambda ZAP II norma... 68 4e-08
17emb|CT984428.1| partial cDNA sequence from a Lambda ZAP II norma... 68 4e-08
18gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, compl... 42 2.2
19dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.2
20gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966,... 40 8.8
21gb|DQ922860.1| Argynnis aglaja voucher NW76-15 cytochrome oxidas... 40 8.8
22emb|CR925711.7| Zebrafish DNA sequence from clone CH211-215G15, ... 40 8.8
23dbj|AB231866.1| Branchiostoma floridae gene for zinc finger prot... 40 8.8
24gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence 40 8.8
25gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, co... 40 8.8
26gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
27gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 8.8
28gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
29gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, comp... 40 8.8
30ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predi... 40 8.8
31gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence 40 8.8
32gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 8.8
33ref|NM_001077051.1| Bos taurus hypothetical protein MGC133945 (M... 40 8.8
34gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosom... 40 8.8
35gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 8.8
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
37emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chr... 40 8.8
38emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chr... 40 8.8
39gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence 40 8.8
40gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I... 40 8.8
41dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.8
42gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I... 40 8.8
43gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 8.8
44emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 8.8

>emb|CT829922.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI026G07, full
           insert sequence
          Length = 597
 Score =  220 bits (111), Expect = 4e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 150 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 209

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 210 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 269

                                                              
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 319
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 270 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 320



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>ref|NM_001073535.1| Oryza sativa (japonica cultivar-group) Os12g0556400 (Os12g0556400)
           mRNA, partial cds
          Length = 1299

 Score =  220 bits (111), Expect = 4e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 211 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 270

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 271 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 330

                                                              
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 319
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 331 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 381



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>dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D03, full
           insert sequence
          Length = 1299

 Score =  220 bits (111), Expect = 4e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 211 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 270

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 271 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 330

                                                              
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 319
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 331 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 381



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>dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F07, full
           insert sequence
          Length = 640

 Score =  220 bits (111), Expect = 4e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 176 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 235

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 236 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 295

                                                              
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 319
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 296 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 346



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>ref|NM_001067960.1| Oryza sativa (japonica cultivar-group) Os08g0272000 (Os08g0272000)
           mRNA, partial cds
          Length = 521

 Score =  198 bits (100), Expect = 2e-47
 Identities = 154/172 (89%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 57  cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 116

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| |||||||||||| |||||| ||||||| |||||||| | ||||| ||||||||  |
Sbjct: 117 cggcgttccctggtacttcatgagccgagggacaaagcatcaatctcaccaagattacat 176

                                                               
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatca 320
           |||   ||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct: 177 ggaaaaagctaacaaggcgaggtcggagagactttcttctggacagtcatca 228



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>dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G12, full
           insert sequence
          Length = 521

 Score =  198 bits (100), Expect = 2e-47
 Identities = 154/172 (89%)
 Strand = Plus / Plus

                                                                       
Query: 149 cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 57  cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 116

                                                                       
Query: 209 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 268
           ||| |||||||||||| |||||| ||||||| |||||||| | ||||| ||||||||  |
Sbjct: 117 cggcgttccctggtacttcatgagccgagggacaaagcatcaatctcaccaagattacat 176

                                                               
Query: 269 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatca 320
           |||   ||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct: 177 ggaaaaagctaacaaggcgaggtcggagagactttcttctggacagtcatca 228



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>gb|AY111250.1| Zea mays CL14815_1 mRNA sequence
          Length = 431

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                       
Query: 153 tacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccattttcggg 212
           ||||| || |||||||||||||||||||| ||||||||||||||||| ||| | ||||| 
Sbjct: 325 tacagtggcgagaagaagcacgtcgtcgccggcatcgccatcttcgctgccgtcttcggc 266

                                                                       
Query: 213 gttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgtggag 272
           || || |||||| ||||||| ||||||||||||||| | ||||| ||||||||  |||| 
Sbjct: 265 gtcccatggtacttcatgacgcgaggggcaaagcatcaatctcaccaagattacatggaa 206

                                                          
Query: 273 cgagctaacaaggcgaggtcggataggctttcttctggacagccatc 319
              |||||||||||||| || || |||||||||||||||||| ||||
Sbjct: 205 aaggctaacaaggcgagatcagagaggctttcttctggacagtcatc 159



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                            
Query: 149      cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
                |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 22675207 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 22675266

                                              
Query: 209      cggggttccctggtacctcatgacccgagg 238
                ||| || |||||||||||||||||||||||
Sbjct: 22675267 cggcgtcccctggtacctcatgacccgagg 22675296



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 236      aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 295
                ||||||||||||| | || || ||||||||  ||||  ||||||||||||||||||||||
Sbjct: 22676348 aggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcgga 22676407

                                        
Query: 296      taggctttcttctggacagccatc 319
                 |||||||||||||||||| ||||
Sbjct: 22676408 gaggctttcttctggacaggcatc 22676431



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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138368

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                          
Query: 149    cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
              |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 120327 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 120386

                                            
Query: 209    cggggttccctggtacctcatgacccgagg 238
              ||| || |||||||||||||||||||||||
Sbjct: 120387 cggcgtcccctggtacctcatgacccgagg 120416



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                          
Query: 236    aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 295
              ||||||||||||| | || || ||||||||  ||||  ||||||||||||||||||||||
Sbjct: 121468 aggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcgga 121527

                                      
Query: 296    taggctttcttctggacagccatc 319
               |||||||||||||||||| ||||
Sbjct: 121528 gaggctttcttctggacaggcatc 121551



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                            
Query: 149      cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
                |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 10440417 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 10440358

                                              
Query: 209      cggggttccctggtacctcatgacccgagg 238
                ||| |||||||||||| |||||| ||||||
Sbjct: 10440357 cggcgttccctggtacttcatgagccgagg 10440328



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                            
Query: 236      aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 295
                |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 10438383 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 10438324

                                         
Query: 296      taggctttcttctggacagccatca 320
                 || ||||||||||||||| |||||
Sbjct: 10438323 gagactttcttctggacagtcatca 10438299



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>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091D16
          Length = 174222

 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                          
Query: 149    cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
              |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 141375 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 141316

                                            
Query: 209    cggggttccctggtacctcatgacccgagg 238
              ||| |||||||||||| |||||| ||||||
Sbjct: 141315 cggcgttccctggtacttcatgagccgagg 141286



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                          
Query: 236    aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 295
              |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 139341 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 139282

                                       
Query: 296    taggctttcttctggacagccatca 320
               || ||||||||||||||| |||||
Sbjct: 139281 gagactttcttctggacagtcatca 139257



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>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0053M06
          Length = 175416

 Score =  131 bits (66), Expect = 3e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                         
Query: 149   cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 208
             |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 63008 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 62949

                                           
Query: 209   cggggttccctggtacctcatgacccgagg 238
             ||| |||||||||||| |||||| ||||||
Sbjct: 62948 cggcgttccctggtacttcatgagccgagg 62919



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                         
Query: 236   aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 295
             |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 60974 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 60915

                                      
Query: 296   taggctttcttctggacagccatca 320
              || ||||||||||||||| |||||
Sbjct: 60914 gagactttcttctggacagtcatca 60890



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>emb|CT987417.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 543

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 gatcacgtcctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgcc 200
           ||||||| |||||||||||| || |||||||||||| | || ||||||||| || || ||
Sbjct: 86  gatcacgccctgtacagcggcgacaagaagcacgtcctggccggcatcgccgtcatctcc 145

                                                                       
Query: 201 gccattttcggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaa 260
             | | ||||| |||||||||| ||||||||  |||||| |||||||  | || ||||||
Sbjct: 146 ctcgtcttcggtgttccctggttcctcatgaatcgagggtcaaagcaccagtcccatcaa 205

                
Query: 261 gatta 265
           |||||
Sbjct: 206 gatta 210



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>emb|CT983352.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 522

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 gatcacgtcctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgcc 200
           ||||||| |||||||||||| || |||||||||||| | || ||||||||| || || ||
Sbjct: 86  gatcacgccctgtacagcggcgacaagaagcacgtcctggccggcatcgccgtcatctcc 145

                                                                       
Query: 201 gccattttcggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaa 260
             | | ||||| |||||||||| ||||||||  |||||| |||||||  | || ||||||
Sbjct: 146 ctcgtcttcggtgttccctggttcctcatgaatcgagggtcaaagcaccagtcccatcaa 205

                
Query: 261 gatta 265
           |||||
Sbjct: 206 gatta 210



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>emb|CT986659.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 479

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                       
Query: 148 tcctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccattt 207
           ||||||||||||| || |||||||||||| | || ||||||||| || || ||  | | |
Sbjct: 110 tcctgtacagcggcgacaagaagcacgtcctggccggcatcgccgtcatctccctcgtct 169

                                                                     
Query: 208 tcggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagatta 265
           |||| |||||||||| ||||||||  |||||| |||||||  | || |||||||||||
Sbjct: 170 tcggtgttccctggttcctcatgaatcgagggtcaaagcaccagtcccatcaagatta 227



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>emb|CT985849.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 479

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                       
Query: 148 tcctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccattt 207
           ||||||||||||| || |||||||||||| | || ||||||||| || || ||  | | |
Sbjct: 110 tcctgtacagcggcgacaagaagcacgtcctggccggcatcgccgtcatctccctcgtct 169

                                                                     
Query: 208 tcggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagatta 265
           |||| |||||||||| ||||||||  |||||| |||||||  | || |||||||||||
Sbjct: 170 tcggtgttccctggttcctcatgaatcgagggtcaaagcaccagtcccatcaagatta 227



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>emb|CT984428.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 479

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                       
Query: 148 tcctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccattt 207
           ||||||||||||| || |||||||||||| | || ||||||||| || || ||  | | |
Sbjct: 110 tcctgtacagcggcgacaagaagcacgtcctggccggcatcgccgtcatctccctcgtct 169

                                                                     
Query: 208 tcggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagatta 265
           |||| |||||||||| ||||||||  |||||| |||||||  | || |||||||||||
Sbjct: 170 tcggtgttccctggttcctcatgaatcgagggtcaaagcaccagtcccatcaagatta 227



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>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence
          Length = 216172

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    aggctttcttctggacagcca 317
              |||||||||||||||||||||
Sbjct: 155930 aggctttcttctggacagcca 155910



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>dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675M1, complete
              sequence
          Length = 177882

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    gaatctgaaggcttaatcttg 411
              |||||||||||||||||||||
Sbjct: 139046 gaatctgaaggcttaatcttg 139066



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>gb|CP000462.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome
          Length = 4744448

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    gcgccagttcaagcggcggg 122
              ||||||||||||||||||||
Sbjct: 119978 gcgccagttcaagcggcggg 119959



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>gb|DQ922860.1| Argynnis aglaja voucher NW76-15 cytochrome oxidase subunit I (COI)
            gene, partial cds; mitochondrial
          Length = 1450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 526  tttttgctattctaggagga 545
            ||||||||||||||||||||
Sbjct: 1085 tttttgctattctaggagga 1104



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>emb|CR925711.7| Zebrafish DNA sequence from clone CH211-215G15, complete sequence
          Length = 200688

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 316    catcactgaaagaatgaaggagct 339
              |||||||| |||||||||||||||
Sbjct: 111011 catcactgcaagaatgaaggagct 110988



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>dbj|AB231866.1| Branchiostoma floridae gene for zinc finger protein AmphiZic, complete
             cds
          Length = 155361

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 558   caaatcatgatatttttgtt 577
             ||||||||||||||||||||
Sbjct: 15617 caaatcatgatatttttgtt 15636



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>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence
          Length = 191756

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    ccaggatagatcacgtcctg 152
              ||||||||||||||||||||
Sbjct: 179476 ccaggatagatcacgtcctg 179457



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>gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, complete sequence
          Length = 164158

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 471   ttattgtaatacagtaacagtaga 494
             ||||||||||||| ||||||||||
Sbjct: 92804 ttattgtaatacactaacagtaga 92781



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>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01,
             complete sequence
          Length = 119525

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   gacaacaaatcatgatattt 572
             ||||||||||||||||||||
Sbjct: 19796 gacaacaaatcatgatattt 19777



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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 475   tgtaatacagtaacagtaga 494
             ||||||||||||||||||||
Sbjct: 32068 tgtaatacagtaacagtaga 32087



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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   gacaacaaatcatgatattt 572
             ||||||||||||||||||||
Sbjct: 90524 gacaacaaatcatgatattt 90505



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>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 485   taacagtagaaattttgttc 504
             ||||||||||||||||||||
Sbjct: 44574 taacagtagaaattttgttc 44555



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>ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predicted mRNA
          Length = 4068

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 174 gtcgtcgcaggcatcgccatcttc 197
           ||||||||||||||| ||||||||
Sbjct: 736 gtcgtcgcaggcatcaccatcttc 759



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>gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence
          Length = 165590

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ccaggatagatcacgtcctg 152
             ||||||||||||||||||||
Sbjct: 22583 ccaggatagatcacgtcctg 22564



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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    agcacgtcgtcgcaggcatc 188
              ||||||||||||||||||||
Sbjct: 160285 agcacgtcgtcgcaggcatc 160304



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>ref|NM_001077051.1| Bos taurus hypothetical protein MGC133945 (MGC133945), mRNA
 gb|BC109580.1| Bos taurus hypothetical protein MGC133945, mRNA (cDNA clone
           MGC:133945 IMAGE:8056717), complete cds
          Length = 1777

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 ctgaaagaatgaaggagctg 340
           ||||||||||||||||||||
Sbjct: 594 ctgaaagaatgaaggagctg 613



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>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence
          Length = 206310

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    taacagtagaaattttgttc 504
              ||||||||||||||||||||
Sbjct: 174215 taacagtagaaattttgttc 174196



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>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   tcactgaaagaatgaaggag 337
             ||||||||||||||||||||
Sbjct: 29113 tcactgaaagaatgaaggag 29094



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 553      gacaacaaatcatgatattt 572
                ||||||||||||||||||||
Sbjct: 21971310 gacaacaaatcatgatattt 21971291



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>emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chromosome 1 Contains a CpG
             island, complete sequence
          Length = 111901

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 538   taggaggagacgatggacaa 557
             ||||||||||||||||||||
Sbjct: 29628 taggaggagacgatggacaa 29609



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>emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chromosome 10 Contains
            part of the TCF7L2 gene for transcription factor 7-like 2
            (T-cell specific, HMG-box) and a ribosomal protein S15
            (RPS15) pseudogene, complete sequence
          Length = 101839

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 512  tctcatagtagtcttttttg 531
            ||||||||||||||||||||
Sbjct: 4999 tctcatagtagtcttttttg 5018



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>gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence
          Length = 164404

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 474   ttgtaatacagtaacagtag 493
             ||||||||||||||||||||
Sbjct: 50228 ttgtaatacagtaacagtag 50247



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>gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I (COI) gene, partial
            cds; mitochondrial
          Length = 1450

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 526  tttttgctattctaggagga 545
            ||||||||||||||||||||
Sbjct: 1085 tttttgctattctaggagga 1104



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>dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G11, full
           insert sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 188 cgccatcttcgccgccattttcgg 211
           ||||||||||||||||||| ||||
Sbjct: 100 cgccatcttcgccgccattatcgg 123



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>gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 526 tttttgctattctaggagga 545
           ||||||||||||||||||||
Sbjct: 768 tttttgctattctaggagga 787



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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tcatagtagtcttttttgct 533
             ||||||||||||||||||||
Sbjct: 44360 tcatagtagtcttttttgct 44379



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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 174     gtcgtcgcaggcatcgccatcttc 197
               ||||||||||||||| ||||||||
Sbjct: 3019964 gtcgtcgcaggcatcaccatcttc 3019941


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 95,867,636
Number of extensions: 4917874
Number of successful extensions: 87781
Number of sequences better than 10.0: 44
Number of HSP's gapped: 87775
Number of HSP's successfully gapped: 49
Length of query: 601
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 579
Effective length of database: 18,508,616,841
Effective search space: 10716489150939
Effective search space used: 10716489150939
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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