| Clone Name | FLbaf35i16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105123:Os04g0165500 | 130 | 7e-31 | 2 | Os10g0141800:Os10g0141800 | 29 | 1.7 | 3 | Os12g0147000:Os12g0147000 | 28 | 2.9 | 4 | AY332472:Os01g0206800 | 28 | 5.0 | 5 | AK109583:Os04g0534200 | 28 | 5.0 | 6 | AK100525:Os01g0206800 | 28 | 5.0 | 7 | Os09g0555800:Os09g0555800 | 27 | 6.6 | 8 | AK107178:Os05g0518200 | 27 | 8.5 |
|---|
>AK105123:Os04g0165500 | Length = 70 Score = 130 bits (326), Expect = 7e-31 Identities = 60/70 (85%), Positives = 66/70 (94%) Frame = +3 Query: 66 MSKARNAVVVTGLVIFAGSGLAFPFYFVKSKNRPIIDSTKPLPPQATFRGPYVNTGSRDI 245 MSKARN +V TGL+ FAG+GLAFPFYFVKSKN+PIIDS+KPLPPQATFRGPYVNTGSRDI Sbjct: 1 MSKARNVLVATGLLAFAGAGLAFPFYFVKSKNKPIIDSSKPLPPQATFRGPYVNTGSRDI 60 Query: 246 GPDPTEYPKK 275 GPD T+YPKK Sbjct: 61 GPDYTDYPKK 70
>Os10g0141800:Os10g0141800 | Length = 388 Score = 29.3 bits (64), Expect = 1.7 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Frame = +2 Query: 5 LEGGAACILHLPSTKFLTQPHVQGTQRRSCHWLG-----DLCWFWPSISLLLCEIKEQAY 169 +E GA L +PS LT H+ +R LG DL + W ++ + ++K + Sbjct: 288 IELGAVLPLEVPSVP-LTDSHL--VRRPPVRILGLVEEDDLFFIWTAVGVFAVQLKSLQF 344 Query: 170 YRFDEASATAGYFPRT 217 + EA +A ++P T Sbjct: 345 KKVFEADVSATFYPYT 360
>Os12g0147000:Os12g0147000 | Length = 387 Score = 28.5 bits (62), Expect = 2.9 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +1 Query: 7 RRRRGLHPPPSLNQVFNSTTCPRHATP 87 +RR GLHP PS F + P H P Sbjct: 271 QRRMGLHPQPSAAPAFPAPMAPLHPPP 297
>AY332472:Os01g0206800 | Length = 677 Score = 27.7 bits (60), Expect = 5.0 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -3 Query: 349 PLTASLVFCMPIENKEKTRWQNIYHFLGYSVGSGPMSRDPVFTYGP 212 P ++ F I+ + +N + LGY + + P R VF Y P Sbjct: 423 PKSSETCFRKQIDTLSRVNHKNFINLLGYCLENQPFMRMMVFEYAP 468
>AK109583:Os04g0534200 | Length = 183 Score = 27.7 bits (60), Expect = 5.0 Identities = 17/59 (28%), Positives = 24/59 (40%) Frame = -3 Query: 388 IIIIPLVNQHHRVPLTASLVFCMPIENKEKTRWQNIYHFLGYSVGSGPMSRDPVFTYGP 212 I ++ L H L F + + +N+ +GYS S P SR VF Y P Sbjct: 51 IAVVSLSASVHYWTSYVELYFQKEVVEMARLSHENVAKMVGYSKESDPFSRMLVFQYPP 109
>AK100525:Os01g0206800 | Length = 683 Score = 27.7 bits (60), Expect = 5.0 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = -3 Query: 349 PLTASLVFCMPIENKEKTRWQNIYHFLGYSVGSGPMSRDPVFTYGP 212 P ++ F I+ + +N + LGY + + P R VF Y P Sbjct: 429 PKSSETCFRKQIDTLSRVNHKNFINLLGYCLENQPFMRMMVFEYAP 474
>Os09g0555800:Os09g0555800 | Length = 577 Score = 27.3 bits (59), Expect = 6.6 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 292 ILFSLCFQWACRKPVRQ*VEPYDAGLP 372 +LF++ ACR+P+R+ VE G P Sbjct: 287 VLFNILLDGACREPLRRPVEVLTGGAP 313
>AK107178:Os05g0518200 | Length = 1055 Score = 26.9 bits (58), Expect = 8.5 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Frame = +3 Query: 3 NSKEARPASSTF---PQPSF*LNHMSKARNAVVVTGLVIFAGSGLAFPFYFVKSKNRPII 173 N E RPA S F P+ N + + ++G + + GL P F Sbjct: 798 NLVEIRPARSQFAYFPRQ----NVTQRTPISSFLSGYAVQSSPGLTTPTKFT-------- 845 Query: 174 DSTKPLPPQATFRGPYVNTGSRDIGPDPTEYP 269 S +PLPP T Y + ++ G P YP Sbjct: 846 -SLRPLPPSVTSSHVYSSEDAQPHGSVPPFYP 876 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,626,329 Number of extensions: 430523 Number of successful extensions: 1014 Number of sequences better than 10.0: 8 Number of HSP's gapped: 1014 Number of HSP's successfully gapped: 8 Length of query: 180 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 86 Effective length of database: 11,636,001 Effective search space: 1000696086 Effective search space used: 1000696086 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)