>LOC_Os04g08330:12004.t00703:unspliced-genomic expressed protein|
Length = 3601
Score = 106 bits (227), Expect(2) = 4e-36
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +3 / +1
Query: 126 LAFPFYFVKSKNRPIIDSTKPLPPQATFRGPYVNTGSRDIGPDPTEYPKK*YIF 287
L+ YF KSKN+PIIDS+KPLPPQATFRGPYVNTGSRDIGPD T+YPKK* I+
Sbjct: 3094 LSSVIYFRKSKNKPIIDSSKPLPPQATFRGPYVNTGSRDIGPDYTDYPKK*SIY 3255
Score = 64.3 bits (134), Expect(2) = 4e-36
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 47 KFLTQPHVQGTQRRSCHWLGDLCWFWPSISLLLC 148
+FL+Q HVQGT+R SCHW LCW W SIS+L C
Sbjct: 2916 RFLSQAHVQGTERFSCHWFVGLCWCWLSISILFC 3017
Score = 95.5 bits (202), Expect(2) = 1e-29
Identities = 40/48 (83%), Positives = 42/48 (87%)
Frame = -3 / -3
Query: 283 IYHFLGYSVGSGPMSRDPVFTYGPRKVACGGRGFVESIIGLFFDFTK* 140
I HFLG SV SGPMSRDPVFTYGPR VACGGRGF ES++GLFFDF K*
Sbjct: 3251 IDHFLG*SV*SGPMSRDPVFTYGPRNVACGGRGFDESMMGLFFDFLK* 3108
Score = 53.8 bits (111), Expect(2) = 1e-29
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 149 HKVEGKC*ARTSKDHQASDNYGVACLGHVVELKTWLRE 36
HK+E KC*A TSK Q S N V CLGHV++ KT+ R+
Sbjct: 3018 HKIEWKC*ASTSKGQQTSGN*NVPCLGHVLDSKTYKRK 2905
Score = 63.4 bits (132), Expect(2) = 4e-22
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3 / +1
Query: 51 F*LNHMSKARNAVVVTGLVIFAGSGLAFPFYFV 149
F*+ HMSKARN +V TGL+ FAG+GLAFPFYFV
Sbjct: 2920 F*VKHMSKARNVLVATGLLAFAGAGLAFPFYFV 3018
Score = 60.6 bits (126), Expect(2) = 4e-22
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = +2 / +3
Query: 140 LLCEIKEQAYYRFDEASATAGYFPRTVCEHRIA*HRA*SNRVPQEVIYI 286
LL EIKEQ ++ F +AS + GY RT+CE+ IA H * R+PQEVIY+
Sbjct: 3108 LLQEIKEQTHH*FIKASTSTGYISRTICEYWIAGHWT*LYRLPQEVIYL 3254
Score = 55.1 bits (114), Expect(2) = 3e-16
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = -1 / -1
Query: 279 ITSWGTRLDQALCHAIRCSHTVLGK*PAVAEASSNR**ACSLISQSRREML 127
ITSWG+R +Q C AI+ SH VL *P EA N+* CSLIS S+ + +
Sbjct: 3247 ITSWGSRYNQVQCPAIQYSHMVLEM*PVEVEALMNQ*WVCSLIS*SKSQKI 3095
Score = 49.2 bits (101), Expect(2) = 3e-16
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 151 FTK*KGNARPEPAKITKPVTTTALRALDMWLS*K 50
+TK* GNA+P PAK KPV T RALDM L+ K
Sbjct: 3020 YTK*NGNAKPAPAKANKPVATKTFRALDMCLTQK 2919
Score = 40.0 bits (81), Expect(2) = 5e-07
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -2 / -2
Query: 278 SLLGVLGWIRPYVTRSGVHIRSSESSLRWQRLRRIDNRPVL*FHKV 141
SLLGV+G IR V RS +HI SS+ SL RL I++ VL*F +V
Sbjct: 3246 SLLGVVGIIRSNVPRSSIHIWSSKCSLWR*RL**INDGFVL*FPEV 3109
Score = 32.7 bits (65), Expect(2) = 5e-07
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1 / -1
Query: 153 ISQSRREMLGXXXXXXXXXXXXXRCVPWTCG*VKNL 46
++Q+R EML R VPWTC *+KNL
Sbjct: 3022 LTQNRMEMLSQHQQRPTNQWQLKRSVPWTCA*LKNL 2915
Score = 43.7 bits (89), Expect(2) = 2e-05
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +1 / +2
Query: 151 NQRTGLLSIRRSLCHRRLLSEDRM*TPDRVT*GLIQPSTPRSDI 282
NQRT I +SL RL ED M* DR T LI P+TPRSD+
Sbjct: 3119 NQRTNPSLIHQSLYLHRLHFEDHM*ILDRGTLDLIIPTTPRSDL 3250
Score = 27.6 bits (54), Expect(2) = 2e-05
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 49 VFNSTTCPRHAT 84
VF S+TCPRH T
Sbjct: 2918 VFESSTCPRHGT 2953
>LOC_Os04g26870:12004.t02393:unspliced-genomic auxin-induced protein PCNT115, putative, expressed|
Length = 5099
Score = 25.8 bits (50), Expect(2) = 4.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 81 NAVVVTGLVIFAGSGLAFP 137
+A V LVI AGSG++FP
Sbjct: 1325 HAAVPLRLVIVAGSGVSFP 1269
Score = 22.6 bits (43), Expect(2) = 4.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1 / -1
Query: 7 RRRRGLHPPPSLNQVFNSTTCPRH 78
RR GL PPP+ ++++ P H
Sbjct: 1493 RRCVGLPPPPAAPNQHHASSYPYH 1422
>LOC_Os02g50570:12002.t04641:unspliced-genomic actin binding protein, putative, expressed|
Length = 4722
Score = 29.5 bits (58), Expect(2) = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 175 SIIGLFFDFTK*KGNARPEPAKITKPVTTTA 83
S+ LFF + + ARP+ AK+ V TTA
Sbjct: 680 SVSSLFFPCRRNRKKARPDTAKLLSAVLTTA 588
Score = 23.1 bits (44), Expect(2) = 5.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1 / -1
Query: 351 FHSLPHWFSACPLKTK 304
FH +P S CP K K
Sbjct: 2295 FHEIPCTHSPCPCKPK 2248
>LOC_Os03g44540:12003.t03841:unspliced-genomic nuclear transcription factor Y subunit A-10, putative, expressed|
Length = 5637
Score = 25.4 bits (49), Expect(2) = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3 / -2
Query: 21 PASSTFPQPSF*LNHMSKARNAVVVTGL 104
PA++T+P PS+ +S A VVV L
Sbjct: 1082 PAAATWPNPSWLCLKLSIAAATVVVVSL 999
Score = 22.6 bits (43), Expect(2) = 6.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / -3
Query: 1 GTRRRRGLHPPPS 39
GT RRR PPP+
Sbjct: 1186 GTGRRRAAPPPPA 1148
>LOC_Os03g63970:12003.t05613:unspliced-genomic gibberellin 20 oxidase 1, putative, expressed|
Length = 1851
Score = 29.0 bits (57), Expect(2) = 8.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 227 VHIRSSESSLRWQRLRRIDNRPV 159
VH+R+ E R R R +D+RPV
Sbjct: 1197 VHLRAEEEGQRAARRRAVDDRPV 1129
Score = 21.7 bits (41), Expect(2) = 8.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1 / -3
Query: 42 EGRWRMQAAPPS 7
EG WR A PP+
Sbjct: 1054 EGGWRATAPPPT 1019
>LOC_Os02g45380:12002.t04125:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed|
Length = 1846
Score = 25.4 bits (49), Expect(2) = 9.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3 / +2
Query: 159 NRPIIDSTKPLPPQATFRGPYVNTGSRDIGPDPTEYPKK 275
+RP ST LP A+ P T S GP P++
Sbjct: 1049 SRPRRSSTSSLPRSASASPPASATSSARTGPSAPAEPRR 1165
Score = 22.1 bits (42), Expect(2) = 9.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 116 WFWPSISLLLC 148
W+W I +LLC
Sbjct: 967 WWWYEIMILLC 999
>LOC_Os08g33650:12008.t03106:unspliced-genomic expressed protein|
Length = 4275
Score = 30.4 bits (60), Expect = 9.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1 / +3
Query: 1 GTRRRRGLHPPPSLNQVFNSTTCPRHATP 87
G RRRRG PPP +V PR P
Sbjct: 105 GCRRRRGSWPPPPRRRVPRGEARPRRLAP 191
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 252,628,758
Number of extensions: 4311937
Number of successful extensions: 16550
Number of sequences better than 10.0: 24
Length of query: 180
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 132
Effective length of database: 52,912,542
Effective search space: 6984455544
Effective search space used: 6984455544
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)