ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os04g08330:12004.t00703:unspliced-genomic expressed protein 106 4e-36
2LOC_Os01g52630:12001.t04689:unspliced-genomic BNR repeat dom... 35 0.41
3LOC_Os08g07330:12008.t00622:unspliced-genomic RGH1A, putativ... 34 0.77
4LOC_Os05g18680:12005.t01635:unspliced-genomic transposon pro... 33 2.0
5LOC_Os01g33960:12001.t02961:unspliced-genomic conserved hypo... 32 2.8
6LOC_Os10g05580:12010.t00435:unspliced-genomic hypothetical p... 32 3.8
7LOC_Os01g62370:12001.t05612:unspliced-genomic expressed protein 32 3.8
8LOC_Os01g42140:12001.t03734:unspliced-genomic expressed protein 32 3.8
9LOC_Os04g26870:12004.t02393:unspliced-genomic auxin-induced ... 26 4.7
10LOC_Os10g38720:12010.t03112:unspliced-genomic glutathione S-... 31 5.2
11LOC_Os09g25460:12009.t02225:unspliced-genomic anthranilate N... 31 5.2
12LOC_Os08g35730:12008.t03313:unspliced-genomic hypothetical p... 31 5.2
13LOC_Os01g47670:12001.t04213:unspliced-genomic expressed protein 31 5.2
14LOC_Os12g05200:12012.t00409:unspliced-genomic DNA-binding pr... 31 5.3
15LOC_Os03g52150:12003.t04541:unspliced-genomic metalloendopep... 31 5.3
16LOC_Os02g50570:12002.t04641:unspliced-genomic actin binding ... 29 5.5
17LOC_Os03g44540:12003.t03841:unspliced-genomic nuclear transc... 25 6.3
18LOC_Os12g08800:12012.t00761:unspliced-genomic las1-like fami... 31 7.2
19LOC_Os03g63970:12003.t05613:unspliced-genomic gibberellin 20... 29 8.0
20LOC_Os02g45380:12002.t04125:unspliced-genomic antiporter/ dr... 25 9.2
21LOC_Os06g14080:12006.t01283:unspliced-genomic ATMAP70-4, put... 30 9.8
22LOC_Os05g34880:12005.t03081:unspliced-genomic zinc finger, C... 30 9.8
23LOC_Os11g15320:12011.t01361:unspliced-genomic hypothetical p... 30 9.9
24LOC_Os08g33650:12008.t03106:unspliced-genomic expressed protein 30 9.9

>LOC_Os04g08330:12004.t00703:unspliced-genomic expressed protein|
          Length = 3601
 Score =  106 bits (227), Expect(2) = 4e-36
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = +3 / +1

                                                                  
Query: 126  LAFPFYFVKSKNRPIIDSTKPLPPQATFRGPYVNTGSRDIGPDPTEYPKK*YIF 287
            L+   YF KSKN+PIIDS+KPLPPQATFRGPYVNTGSRDIGPD T+YPKK* I+
Sbjct: 3094 LSSVIYFRKSKNKPIIDSSKPLPPQATFRGPYVNTGSRDIGPDYTDYPKK*SIY 3255



 Score = 64.3 bits (134), Expect(2) = 4e-36
 Identities = 22/34 (64%), Positives = 26/34 (76%)
 Frame = +2 / +3

                                              
Query: 47   KFLTQPHVQGTQRRSCHWLGDLCWFWPSISLLLC 148
            +FL+Q HVQGT+R SCHW   LCW W SIS+L C
Sbjct: 2916 RFLSQAHVQGTERFSCHWFVGLCWCWLSISILFC 3017



 Score = 95.5 bits (202), Expect(2) = 1e-29
 Identities = 40/48 (83%), Positives = 42/48 (87%)
 Frame = -3 / -3

                                                            
Query: 283  IYHFLGYSVGSGPMSRDPVFTYGPRKVACGGRGFVESIIGLFFDFTK* 140
            I HFLG SV SGPMSRDPVFTYGPR VACGGRGF ES++GLFFDF K*
Sbjct: 3251 IDHFLG*SV*SGPMSRDPVFTYGPRNVACGGRGFDESMMGLFFDFLK* 3108



 Score = 53.8 bits (111), Expect(2) = 1e-29
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = -2 / -2

                                                  
Query: 149  HKVEGKC*ARTSKDHQASDNYGVACLGHVVELKTWLRE 36
            HK+E KC*A TSK  Q S N  V CLGHV++ KT+ R+
Sbjct: 3018 HKIEWKC*ASTSKGQQTSGN*NVPCLGHVLDSKTYKRK 2905



 Score = 63.4 bits (132), Expect(2) = 4e-22
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +3 / +1

                                             
Query: 51   F*LNHMSKARNAVVVTGLVIFAGSGLAFPFYFV 149
            F*+ HMSKARN +V TGL+ FAG+GLAFPFYFV
Sbjct: 2920 F*VKHMSKARNVLVATGLLAFAGAGLAFPFYFV 3018



 Score = 60.6 bits (126), Expect(2) = 4e-22
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = +2 / +3

                                                             
Query: 140  LLCEIKEQAYYRFDEASATAGYFPRTVCEHRIA*HRA*SNRVPQEVIYI 286
            LL EIKEQ ++ F +AS + GY  RT+CE+ IA H  *  R+PQEVIY+
Sbjct: 3108 LLQEIKEQTHH*FIKASTSTGYISRTICEYWIAGHWT*LYRLPQEVIYL 3254



 Score = 55.1 bits (114), Expect(2) = 3e-16
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = -1 / -1

                                                               
Query: 279  ITSWGTRLDQALCHAIRCSHTVLGK*PAVAEASSNR**ACSLISQSRREML 127
            ITSWG+R +Q  C AI+ SH VL  *P   EA  N+*  CSLIS S+ + +
Sbjct: 3247 ITSWGSRYNQVQCPAIQYSHMVLEM*PVEVEALMNQ*WVCSLIS*SKSQKI 3095



 Score = 49.2 bits (101), Expect(2) = 3e-16
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -3 / -3

                                              
Query: 151  FTK*KGNARPEPAKITKPVTTTALRALDMWLS*K 50
            +TK* GNA+P PAK  KPV T   RALDM L+ K
Sbjct: 3020 YTK*NGNAKPAPAKANKPVATKTFRALDMCLTQK 2919



 Score = 40.0 bits (81), Expect(2) = 5e-07
 Identities = 25/46 (54%), Positives = 31/46 (67%)
 Frame = -2 / -2

                                                          
Query: 278  SLLGVLGWIRPYVTRSGVHIRSSESSLRWQRLRRIDNRPVL*FHKV 141
            SLLGV+G IR  V RS +HI SS+ SL   RL  I++  VL*F +V
Sbjct: 3246 SLLGVVGIIRSNVPRSSIHIWSSKCSLWR*RL**INDGFVL*FPEV 3109



 Score = 32.7 bits (65), Expect(2) = 5e-07
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1 / -1

                                                
Query: 153  ISQSRREMLGXXXXXXXXXXXXXRCVPWTCG*VKNL 46
            ++Q+R EML              R VPWTC *+KNL
Sbjct: 3022 LTQNRMEMLSQHQQRPTNQWQLKRSVPWTCA*LKNL 2915



 Score = 43.7 bits (89), Expect(2) = 2e-05
 Identities = 24/44 (54%), Positives = 27/44 (61%)
 Frame = +1 / +2

                                                        
Query: 151  NQRTGLLSIRRSLCHRRLLSEDRM*TPDRVT*GLIQPSTPRSDI 282
            NQRT    I +SL   RL  ED M*  DR T  LI P+TPRSD+
Sbjct: 3119 NQRTNPSLIHQSLYLHRLHFEDHM*ILDRGTLDLIIPTTPRSDL 3250



 Score = 27.6 bits (54), Expect(2) = 2e-05
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1 / +2

                        
Query: 49   VFNSTTCPRHAT 84
            VF S+TCPRH T
Sbjct: 2918 VFESSTCPRHGT 2953



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>LOC_Os01g52630:12001.t04689:unspliced-genomic BNR repeat domain protein, putative, expressed|
          Length = 3487

 Score = 35.0 bits (70), Expect = 0.41
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3 / -1

                                              
Query: 310  NKEKTRWQNIYHFLGYSVGSGPMSRDPVFTYGPR 209
            NKE T WQ I      + GSGPM++ P+ T   R
Sbjct: 2545 NKEGTSWQAINRLRRANGGSGPMAKLPIITKAKR 2444



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>LOC_Os08g07330:12008.t00622:unspliced-genomic RGH1A, putative, expressed|
          Length = 4566

 Score = 34.1 bits (68), Expect = 0.77
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2 / +1

                                     
Query: 47  KFLTQPHVQGTQRRSCHWLGDLCWFW 124
           KFL +  V+  ++RSC W   +C+FW
Sbjct: 472 KFLEEKRVKSKKKRSCPWNLIMCFFW 549



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>LOC_Os05g18680:12005.t01635:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 2454

 Score = 32.7 bits (65), Expect = 2.0
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1 / +2

                                        
Query: 4    TRRRRGLHPPPSLNQVFNSTTCPRHATP 87
            TRRRR   PP +     ++TT PR ATP
Sbjct: 2045 TRRRRATPPPRNAATGRSATTAPRRATP 2128



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>LOC_Os01g33960:12001.t02961:unspliced-genomic conserved hypothetical protein|
          Length = 9574

 Score = 32.2 bits (64), Expect = 2.8
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2 / -3

                                               
Query: 44   TKFLTQPHVQGTQRRSCHWLGDLCWFWPSISLLLC 148
            T+   + HV+GT+R  C WL     ++P +  +LC
Sbjct: 8462 TRARRENHVEGTRRALCKWLHVGMGYYPILLKILC 8358



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>LOC_Os10g05580:12010.t00435:unspliced-genomic hypothetical protein|
          Length = 1508

 Score = 31.8 bits (63), Expect = 3.8
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +2 / -1

                                 
Query: 62   PHVQGTQRRSCHWLGDLCWFW 124
            PH QG  RRS  WLG L   W
Sbjct: 1019 PHAQGPCRRSGSWLGSLALGW 957



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>LOC_Os01g62370:12001.t05612:unspliced-genomic expressed protein|
          Length = 1966

 Score = 31.8 bits (63), Expect = 3.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3 / -3

                                                 
Query: 180 TKPLPPQATFRGPYVNTGSRDIGPDPTEYPKK*YIFCH 293
           T+P PP+   R P++   + DI   P   P + Y   H
Sbjct: 320 TRPWPPRTARRIPHIRQEATDIASAPASSPARSYCHAH 207



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>LOC_Os01g42140:12001.t03734:unspliced-genomic expressed protein|
          Length = 1343

 Score = 31.8 bits (63), Expect = 3.8
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +1 / -2

                                      
Query: 7   RRRRGLHPPPSLNQVFNSTTCPRHATP 87
           RRRR   P PS  ++ +STT PR ATP
Sbjct: 925 RRRRRRSPQPSPLRLPSSTTPPRSATP 845



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>LOC_Os04g26870:12004.t02393:unspliced-genomic auxin-induced protein PCNT115, putative, expressed|
          Length = 5099

 Score = 25.8 bits (50), Expect(2) = 4.7
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3 / -1

                               
Query: 81   NAVVVTGLVIFAGSGLAFP 137
            +A V   LVI AGSG++FP
Sbjct: 1325 HAAVPLRLVIVAGSGVSFP 1269



 Score = 22.6 bits (43), Expect(2) = 4.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1 / -1

                                    
Query: 7    RRRRGLHPPPSLNQVFNSTTCPRH 78
            RR  GL PPP+     ++++ P H
Sbjct: 1493 RRCVGLPPPPAAPNQHHASSYPYH 1422



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>LOC_Os10g38720:12010.t03112:unspliced-genomic glutathione S-transferase GSTU6, putative, expressed|
          Length = 909

 Score = 31.3 bits (62), Expect = 5.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2 / +1

                                           
Query: 326 LHAH*KQRENKMAKYISLLGVLGWIRPYVTRS 231
           +H   K+ E  MA+ + LLG L  + PYV R+
Sbjct: 13  IHRSEKRDERSMAEELKLLGSLSGVSPYVIRA 108



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>LOC_Os09g25460:12009.t02225:unspliced-genomic anthranilate N-benzoyltransferase protein 1, putative, expressed|
          Length = 4440

 Score = 31.3 bits (62), Expect = 5.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2 / +1

                               
Query: 68   VQGTQRRSCHWLGDLCWFW 124
            ++   RR  +W+GD  WFW
Sbjct: 1504 IEYLDRRRVYWIGDATWFW 1560



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>LOC_Os08g35730:12008.t03313:unspliced-genomic hypothetical protein|
          Length = 831

 Score = 31.3 bits (62), Expect = 5.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2 / -2

                                      
Query: 260 GWIRPYVTRSGVHIRSSESSLRWQRLR 180
           GW+     R G+H R    + RW RLR
Sbjct: 815 GWVVSRKKRVGIHARRRHRAYRWNRLR 735



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>LOC_Os01g47670:12001.t04213:unspliced-genomic expressed protein|
          Length = 1209

 Score = 31.3 bits (62), Expect = 5.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2 / -2

                                               
Query: 122 WPSISLLLCEIKEQAYYRFDEASATAGYFPRTVCEH 229
           WPS SL++ E   +   R  E +A+ G+ P + C+H
Sbjct: 518 WPSSSLVMKEKLCRCPRRRPEEAASTGFAPASECQH 411



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>LOC_Os12g05200:12012.t00409:unspliced-genomic DNA-binding protein, putative, expressed|
          Length = 4180

 Score = 31.3 bits (62), Expect = 5.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1 / +1

                                       
Query: 7    RRRRGLHPPPSLNQVFNSTTCPRHATP 87
            +RR GLHP PS    F +   P H  P
Sbjct: 3733 QRRMGLHPQPSAAPAFPAPMAPLHPPP 3813



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>LOC_Os03g52150:12003.t04541:unspliced-genomic metalloendopeptidase, putative, expressed|
          Length = 9590

 Score = 31.3 bits (62), Expect = 5.3
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1 / -3

                                      
Query: 7   RRRRGLHPPPSLNQVFNSTTCPRHATP 87
           RR R  HPPP  +  + STT P  A P
Sbjct: 357 RRPRRTHPPPPHHPPYESTTPPPSAAP 277



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>LOC_Os02g50570:12002.t04641:unspliced-genomic actin binding protein, putative, expressed|
          Length = 4722

 Score = 29.5 bits (58), Expect(2) = 5.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3 / -2

                                          
Query: 175 SIIGLFFDFTK*KGNARPEPAKITKPVTTTA 83
           S+  LFF   + +  ARP+ AK+   V TTA
Sbjct: 680 SVSSLFFPCRRNRKKARPDTAKLLSAVLTTA 588



 Score = 23.1 bits (44), Expect(2) = 5.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1 / -1

                            
Query: 351  FHSLPHWFSACPLKTK 304
            FH +P   S CP K K
Sbjct: 2295 FHEIPCTHSPCPCKPK 2248



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>LOC_Os03g44540:12003.t03841:unspliced-genomic nuclear transcription factor Y subunit A-10, putative, expressed|
          Length = 5637

 Score = 25.4 bits (49), Expect(2) = 6.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3 / -2

                                        
Query: 21   PASSTFPQPSF*LNHMSKARNAVVVTGL 104
            PA++T+P PS+    +S A   VVV  L
Sbjct: 1082 PAAATWPNPSWLCLKLSIAAATVVVVSL 999



 Score = 22.6 bits (43), Expect(2) = 6.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1 / -3

                         
Query: 1    GTRRRRGLHPPPS 39
            GT RRR   PPP+
Sbjct: 1186 GTGRRRAAPPPPA 1148



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>LOC_Os12g08800:12012.t00761:unspliced-genomic las1-like family protein, expressed|
          Length = 5513

 Score = 30.9 bits (61), Expect = 7.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1 / -3

                                       
Query: 1   GTRRRRGLHPPPSLNQVFNSTTCPRHAT 84
           G  RRR  HP  S+ QV ++T+ PR A+
Sbjct: 504 GAPRRRASHPSKSVRQVPSTTSYPRAAS 421



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>LOC_Os03g63970:12003.t05613:unspliced-genomic gibberellin 20 oxidase 1, putative, expressed|
          Length = 1851

 Score = 29.0 bits (57), Expect(2) = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2 / -1

                                   
Query: 227  VHIRSSESSLRWQRLRRIDNRPV 159
            VH+R+ E   R  R R +D+RPV
Sbjct: 1197 VHLRAEEEGQRAARRRAVDDRPV 1129



 Score = 21.7 bits (41), Expect(2) = 8.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1 / -3

                        
Query: 42   EGRWRMQAAPPS 7
            EG WR  A PP+
Sbjct: 1054 EGGWRATAPPPT 1019



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>LOC_Os02g45380:12002.t04125:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed|
          Length = 1846

 Score = 25.4 bits (49), Expect(2) = 9.2
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3 / +2

                                                   
Query: 159  NRPIIDSTKPLPPQATFRGPYVNTGSRDIGPDPTEYPKK 275
            +RP   ST  LP  A+   P   T S   GP     P++
Sbjct: 1049 SRPRRSSTSSLPRSASASPPASATSSARTGPSAPAEPRR 1165



 Score = 22.1 bits (42), Expect(2) = 9.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2 / +1

                      
Query: 116 WFWPSISLLLC 148
           W+W  I +LLC
Sbjct: 967 WWWYEIMILLC 999



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>LOC_Os06g14080:12006.t01283:unspliced-genomic ATMAP70-4, putative, expressed|
          Length = 5684

 Score = 30.4 bits (60), Expect = 9.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2 / -1

                                    
Query: 308  VFNGHAENQ*GSEWNPMMLVYQWD 379
            V    ++NQ*GSEWN   + ++W+
Sbjct: 5075 VLGSWSQNQ*GSEWNKYRVKWKWN 5004



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>LOC_Os05g34880:12005.t03081:unspliced-genomic zinc finger, C3HC4 type family protein, expressed|
          Length = 4546

 Score = 30.4 bits (60), Expect = 9.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3 / +1

                                       
Query: 153 SKNRPIIDSTKPLPPQATFRGPYVNTGS 236
           S   P+  ST+PLPP+A+  GP + T +
Sbjct: 550 SSRSPLRRSTRPLPPRASPSGPSLPTSA 633



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>LOC_Os11g15320:12011.t01361:unspliced-genomic hypothetical protein|
          Length = 3017

 Score = 30.4 bits (60), Expect = 9.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1 / -1

                                     
Query: 4   TRRRRGLHPPPSLNQVFNSTTCPRHA 81
           TRRRR    PPS ++   +T  PRHA
Sbjct: 101 TRRRRRAAAPPSSSRCATATKPPRHA 24



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>LOC_Os08g33650:12008.t03106:unspliced-genomic expressed protein|
          Length = 4275

 Score = 30.4 bits (60), Expect = 9.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +1 / +3

                                        
Query: 1   GTRRRRGLHPPPSLNQVFNSTTCPRHATP 87
           G RRRRG  PPP   +V      PR   P
Sbjct: 105 GCRRRRGSWPPPPRRRVPRGEARPRRLAP 191


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 252,628,758
Number of extensions: 4311937
Number of successful extensions: 16550
Number of sequences better than 10.0: 24
Length of query: 180
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 132
Effective length of database: 52,912,542
Effective search space: 6984455544
Effective search space used: 6984455544
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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