ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q4FZU8:FA65A_RAT Protein FAM65A - Rattus norvegicus (Rat) 29 9.0

>Q4FZU8:FA65A_RAT Protein FAM65A - Rattus norvegicus (Rat)|
          Length = 1217
 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 153 SKNRPIIDSTKPLPPQATFRGP-YVNTGSRDIGPDPT 260
           S  +P++   +PLP Q TFR P  +++GS D  P  T
Sbjct: 398 STPKPLVQQPEPLPVQVTFRRPESLSSGSMDEEPPLT 434


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 105,934,955
Number of extensions: 2473147
Number of successful extensions: 5129
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5129
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 74
Effective length of database: 71,611,169
Effective search space: 5299226506
Effective search space used: 5299226506
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top