ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001058668.1| Oryza sativa (japonica cultivar-group) Os04g... 149 1e-32
2dbj|AK105123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
3emb|CT831697.1| Oryza sativa (indica cultivar-group) cDNA clone:... 141 3e-30
4emb|CT831696.1| Oryza sativa (indica cultivar-group) cDNA clone:... 141 3e-30
5gb|AY106261.1| Zea mays PCO135195 mRNA sequence 141 3e-30
6emb|CT833325.1| Oryza sativa (indica cultivar-group) cDNA clone:... 133 7e-28
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
8emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 78 4e-11
9emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 74 6e-10
10gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome ... 46 0.13
11gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosom... 46 0.13
12gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome... 46 0.13
13gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.51
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
15ref|XR_023151.1| PREDICTED: Pan troglodytes similar to CDC10 pro... 42 2.0
16gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, co... 42 2.0
17gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome... 42 2.0
18gb|AC107701.8| Mus musculus chromosome 3, clone RP23-49O22, comp... 42 2.0
19gb|AC158151.4| Mus musculus chromosome 1, clone RP24-315B17, com... 42 2.0
20gb|AC115903.12| Mus musculus chromosome 1, clone RP24-472L18, co... 42 2.0
21gb|AC108935.5| Homo sapiens BAC clone RP11-503L19 from 4, comple... 42 2.0
22emb|CR392006.7| Zebrafish DNA sequence from clone DKEYP-57F11 in... 42 2.0
23gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosom... 42 2.0
24emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on ch... 42 2.0
25emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 ... 42 2.0
26emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, c... 42 2.0
27emb|BX936386.9| Zebrafish DNA sequence from clone CH211-232P21 i... 42 2.0
28emb|AL929300.6| Mouse DNA sequence from clone RP23-319O18 on chr... 42 2.0
29emb|AL355005.3| Mouse DNA sequence from clone RP21-429M4 on chro... 42 2.0
30gb|AC187010.10| Canis Familiaris chromosome 11, clone XX-159O9, ... 40 7.9
31emb|AM167904.1| Bordetella avium 197N complete genome 40 7.9
32gb|DQ908120.1| Gossypium hirsutum clone LIB5327-042-A1-N1-G3_PS_... 40 7.9
33ref|XM_001167533.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
34ref|XM_001167712.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
35ref|XM_001167566.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
36ref|XM_001167621.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
37ref|XM_001167692.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
38ref|XM_001167740.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
39ref|XM_001167592.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
40ref|XM_001167667.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
41ref|XM_001167645.1| PREDICTED: Pan troglodytes protein tyrosine ... 40 7.9
42gb|AC186998.6| Canis Familiaris chromosome 11, clone XX-402C16, ... 40 7.9
43gb|AC187591.2| Gallus gallus BAC clone CH261-119N12 from chromos... 40 7.9
44gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.9
45gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, co... 40 7.9
46gb|AC161439.3| Mus musculus chromosome 7, clone RP24-297G19, com... 40 7.9
47gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
48gb|AC101686.8| Mus musculus chromosome 7, clone RP23-200O8, comp... 40 7.9
49gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosom... 40 7.9
50gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete seq... 40 7.9
51ref|NM_002844.2| Homo sapiens protein tyrosine phosphatase, rece... 40 7.9
52emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in ... 40 7.9
53gb|AC078786.22| Homo sapiens 3 BAC RP11-474F17 (Roswell Park Can... 40 7.9
54dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
55gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Can... 40 7.9
56emb|AL591622.6| Human DNA sequence from clone RP11-141L16 on chr... 40 7.9
57emb|AL139275.30| Human DNA sequence from clone RP11-552E20 on ch... 40 7.9
58emb|AL035470.10|HS480J14 Human DNA sequence from clone RP3-480J1... 40 7.9
59emb|CR858007.1| Pongo pygmaeus mRNA; cDNA DKFZp469K035 (from clo... 40 7.9
60gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, com... 40 7.9
61emb|CR749277.1| Homo sapiens mRNA; cDNA DKFZp686C2268 (from clon... 40 7.9
62dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.9
63gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete se... 40 7.9
64emb|BX647498.1|HSM807644 Homo sapiens mRNA; cDNA DKFZp779N1045 (... 40 7.9
65gb|L77886.1|HUMPTPC Human protein tyrosine phosphatase mRNA, com... 40 7.9
66emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, ... 40 7.9
67gb|AC109994.2| Homo sapiens chromosome X clone CTD-2537J14 map q... 40 7.9 
>ref|NM_001058668.1| Oryza sativa (japonica cultivar-group) Os04g0165500 (Os04g0165500)
           mRNA, complete cds
          Length = 572
 Score =  149 bits (75), Expect = 1e-32
 Identities = 192/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 49  gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
           |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 133 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 192

                                                                       
Query: 109 tctttgctggttctggcctagcatttcccttctactttgtgaaatcaaagaacaggccta 168
            |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||  || |
Sbjct: 193 cctttgctggtgctggcttagcatttccattctattttgtgaaatcaaagaacaaaccca 252

                                                                       
Query: 169 ttatcgattcgacgaagcctctgccaccgcaggctactttccgaggaccgtatgtgaaca 228
           | || |||||  | |||||||| || || |||||||| || |||||||| |||||||| |
Sbjct: 253 tcattgattcatcaaagcctctacctccacaggctacatttcgaggaccatatgtgaata 312

                                                              
Query: 229 ccggatcgcgtgacatagggcctgatccaaccgagtaccccaagaagtgat 279
           | |||||||| ||||| || ||||||   ||||| ||||||||||||||||
Sbjct: 313 ctggatcgcgggacattggacctgattataccgactaccccaagaagtgat 363
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>dbj|AK105123.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-C10, full
           insert sequence
          Length = 572

 Score =  149 bits (75), Expect = 1e-32
 Identities = 192/231 (83%)
 Strand = Plus / Plus

                                                                       
Query: 49  gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
           |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 133 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 192

                                                                       
Query: 109 tctttgctggttctggcctagcatttcccttctactttgtgaaatcaaagaacaggccta 168
            |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||  || |
Sbjct: 193 cctttgctggtgctggcttagcatttccattctattttgtgaaatcaaagaacaaaccca 252

                                                                       
Query: 169 ttatcgattcgacgaagcctctgccaccgcaggctactttccgaggaccgtatgtgaaca 228
           | || |||||  | |||||||| || || |||||||| || |||||||| |||||||| |
Sbjct: 253 tcattgattcatcaaagcctctacctccacaggctacatttcgaggaccatatgtgaata 312

                                                              
Query: 229 ccggatcgcgtgacatagggcctgatccaaccgagtaccccaagaagtgat 279
           | |||||||| ||||| || ||||||   ||||| ||||||||||||||||
Sbjct: 313 ctggatcgcgggacattggacctgattataccgactaccccaagaagtgat 363
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>emb|CT831697.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI010M02, full
           insert sequence
          Length = 712

 Score =  141 bits (71), Expect = 3e-30
 Identities = 191/231 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
           |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 133 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 192

                                                                       
Query: 109 tctttgctggttctggcctagcatttcccttctactttgtgaaatcaaagaacaggccta 168
            |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||  || |
Sbjct: 193 cctttgctggtgctggcttagcatttccattctattttgtgaaatcaaagaacaaaccca 252

                                                                       
Query: 169 ttatcgattcgacgaagcctctgccaccgcaggctactttccgaggaccgtatgtgaaca 228
           | || |||||  | || ||||| || || |||||||| || |||||||| |||||||| |
Sbjct: 253 tcattgattcatcaaaacctctacctccacaggctacatttcgaggaccatatgtgaata 312

                                                              
Query: 229 ccggatcgcgtgacatagggcctgatccaaccgagtaccccaagaagtgat 279
           | |||||||| ||||| || ||||||   ||||| ||||||||||||||||
Sbjct: 313 ctggatcgcgggacattggacctgattataccgactaccccaagaagtgat 363
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>emb|CT831696.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA010N23, full
           insert sequence
          Length = 518

 Score =  141 bits (71), Expect = 3e-30
 Identities = 191/231 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
           |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 79  gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 138

                                                                       
Query: 109 tctttgctggttctggcctagcatttcccttctactttgtgaaatcaaagaacaggccta 168
            |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||  || |
Sbjct: 139 cctttgctggtgctggcttagcatttccattctattttgtgaaatcaaagaacaaaccca 198

                                                                       
Query: 169 ttatcgattcgacgaagcctctgccaccgcaggctactttccgaggaccgtatgtgaaca 228
           | || |||||  | || ||||| || || |||||||| || |||||||| |||||||| |
Sbjct: 199 tcattgattcatcaaaacctctacctccacaggctacatttcgaggaccatatgtgaata 258

                                                              
Query: 229 ccggatcgcgtgacatagggcctgatccaaccgagtaccccaagaagtgat 279
           | |||||||| ||||| || ||||||   ||||| ||||||||||||||||
Sbjct: 259 ctggatcgcgggacattggacctgattataccgactaccccaagaagtgat 309
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>gb|AY106261.1| Zea mays PCO135195 mRNA sequence
          Length = 596

 Score =  141 bits (71), Expect = 3e-30
 Identities = 179/215 (83%)
 Strand = Plus / Plus

                                                                       
Query: 65  catgtccaaggcacgcaacgccgtagttgtcactggcttggtgatctttgctggttctgg 124
           |||||| |||||||| || || ||||||| |||||| ||| || |||| |||||| ||||
Sbjct: 313 catgtcaaaggcacgtaatgctgtagttgccactggattgctgctcttcgctggtgctgg 372

                                                                       
Query: 125 cctagcatttcccttctactttgtgaaatcaaagaacaggcctattatcgattcgacgaa 184
           | || ||||||| |||   || |||||||||||||||| ||||||||| |||||||| ||
Sbjct: 373 cttatcatttccgttccttttcgtgaaatcaaagaacaagcctattattgattcgacaaa 432

                                                                       
Query: 185 gcctctgccaccgcaggctactttccgaggaccgtatgtgaacaccggatcgcgtgacat 244
            ||||||||||| ||||||||||| |||||||| || ||||| || || || ||||| ||
Sbjct: 433 acctctgccaccacaggctacttttcgaggaccatacgtgaatacgggttcacgtgatat 492

                                              
Query: 245 agggcctgatccaaccgagtaccccaagaagtgat 279
            || |||||||| ||| | || |||||||||||||
Sbjct: 493 cggacctgatcctaccaactatcccaagaagtgat 527
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>emb|CT833325.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA010A19, full
           insert sequence
          Length = 588

 Score =  133 bits (67), Expect = 7e-28
 Identities = 187/227 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
           |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 160 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 219

                                                                       
Query: 109 tctttgctggttctggcctagcatttcccttctactttgtgaaatcaaagaacaggccta 168
            |||||||||| ||||| |||||||||| ||||| |||||||||||||||||||  || |
Sbjct: 220 cctttgctggtgctggcttagcatttccattctattttgtgaaatcaaagaacaaaccca 279

                                                                       
Query: 169 ttatcgattcgacgaagcctctgccaccgcaggctactttccgaggaccgtatgtgaaca 228
           | || |||||  | || ||||| || || |||||||| || |||||||| |||||||| |
Sbjct: 280 tcattgattcatcaaaacctctacctccacaggctacatttcgaggaccatatgtgaata 339

                                                          
Query: 229 ccggatcgcgtgacatagggcctgatccaaccgagtaccccaagaag 275
           | |||||||| ||||| || ||||||   ||||| ||||||||||||
Sbjct: 340 ctggatcgcgggacattggacctgattataccgactaccccaagaag 386
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                           
Query: 149     gaaatcaaagaacaggcctattatcgattcgacgaagcctctgccaccgcaggctacttt 208
               ||||||||||||||  || || || |||||  | |||||||| || || |||||||| ||
Sbjct: 4418863 gaaatcaaagaacaaacccatcattgattcatcaaagcctctacctccacaggctacatt 4418804

                                                                           
Query: 209     ccgaggaccgtatgtgaacaccggatcgcgtgacatagggcctgatccaaccgagtaccc 268
                |||||||| |||||||| || |||||||| ||||| || ||||||   ||||| |||||
Sbjct: 4418803 tcgaggaccatatgtgaatactggatcgcgggacattggacctgattataccgactaccc 4418744

                          
Query: 269     caagaagtgat 279
               |||||||||||
Sbjct: 4418743 caagaagtgat 4418733



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                           
Query: 49      gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
               |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 4419062 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 4419003

                                                        
Query: 109     tctttgctggttctggcctagcatttcccttctactttgtg 149
                |||||||||| ||||| |||||||||| ||||| ||||||
Sbjct: 4419002 cctttgctggtgctggcttagcatttccattctattttgtg 4418962
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
             complete sequence
          Length = 150305

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                         
Query: 149   gaaatcaaagaacaggcctattatcgattcgacgaagcctctgccaccgcaggctacttt 208
             ||||||||||||||  || || || |||||  | |||||||| || || |||||||| ||
Sbjct: 46595 gaaatcaaagaacaaacccatcattgattcatcaaagcctctacctccacaggctacatt 46536

                                                                         
Query: 209   ccgaggaccgtatgtgaacaccggatcgcgtgacatagggcctgatccaaccgagtaccc 268
              |||||||| |||||||| || |||||||| ||||| || ||||||   ||||| |||||
Sbjct: 46535 tcgaggaccatatgtgaatactggatcgcgggacattggacctgattataccgactaccc 46476

                        
Query: 269   caagaagtgat 279
             |||||||||||
Sbjct: 46475 caagaagtgat 46465



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 49    gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
             |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 46794 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 46735

                                                      
Query: 109   tctttgctggttctggcctagcatttcccttctactttgtg 149
              |||||||||| ||||| |||||||||| ||||| ||||||
Sbjct: 46734 cctttgctggtgctggcttagcatttccattctattttgtg 46694
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>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete
             sequence
          Length = 102515

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 49    gtttttaactcaaccacatgtccaaggcacgcaacgccgtagttgtcactggcttggtga 108
             |||||| | |||| ||||||||||||||||| ||||   |||||| |||||| ||| || 
Sbjct: 83310 gtttttgagtcaagcacatgtccaaggcacggaacgttttagttgccactggtttgttgg 83251

                                                      
Query: 109   tctttgctggttctggcctagcatttcccttctactttgtg 149
              |||||||||| ||||| |||||||||| ||||| ||||||
Sbjct: 83250 cctttgctggtgctggcttagcatttccattctattttgtg 83210



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 107/131 (81%)
 Strand = Plus / Minus

                                                                         
Query: 149   gaaatcaaagaacaggcctattatcgattcgacgaagcctctgccaccgcaggctacttt 208
             ||||||||||||||  || || || |||||  | || ||||| || || |||||||| ||
Sbjct: 83111 gaaatcaaagaacaaacccatcattgattcatcaaaacctctacctccacaggctacatt 83052

                                                                         
Query: 209   ccgaggaccgtatgtgaacaccggatcgcgtgacatagggcctgatccaaccgagtaccc 268
              |||||||| |||||||| || |||||||| ||||| || ||||||   ||||| |||||
Sbjct: 83051 tcgaggaccatatgtgaatactggatcgcgggacattggacctgattataccgactaccc 82992

                        
Query: 269   caagaagtgat 279
             |||||||||||
Sbjct: 82991 caagaagtgat 82981
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>gb|AC135114.4| Mus musculus BAC clone RP24-69H7 from chromosome 14, complete sequence
          Length = 181062

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 285   ttttgccatcttgttttctcttt 307
             |||||||||||||||||||||||
Sbjct: 48348 ttttgccatcttgttttctcttt 48326
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>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete sequence
          Length = 195224

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 291    catcttgttttctctttgttttcaatg 317
              |||||||||||||||||||||| ||||
Sbjct: 182246 catcttgttttctctttgttttaaatg 182220
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>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence
          Length = 172103

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 291   catcttgttttctctttgttttcaatg 317
             |||||||||||||||||||||| ||||
Sbjct: 56957 catcttgttttctctttgttttaaatg 56931
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12,
              complete sequence
          Length = 156263

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 331    ccagtgaggcagtgagtggaac 352
              ||||||||||||||||||||||
Sbjct: 129752 ccagtgaggcagtgagtggaac 129731
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 331     ccagtgaggcagtgagtggaac 352
               ||||||||||||||||||||||
Sbjct: 3564121 ccagtgaggcagtgagtggaac 3564100
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>ref|XR_023151.1| PREDICTED: Pan troglodytes similar to CDC10 protein (LOC472620), mRNA
          Length = 2805

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 280  atatattttgccatcttgttttctctttgtttt 312
            ||||| |||||||||||||||| | ||||||||
Sbjct: 2458 atataatttgccatcttgttttttttttgtttt 2426
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>gb|AC124103.5| Mus musculus chromosome 15, clone RP24-271M13, complete sequence
          Length = 177753

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 285    ttttgccatcttgttttctct 305
              |||||||||||||||||||||
Sbjct: 153146 ttttgccatcttgttttctct 153126
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>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 293   tcttgttttctctttgttttc 313
             |||||||||||||||||||||
Sbjct: 96861 tcttgttttctctttgttttc 96841
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>gb|AC107701.8| Mus musculus chromosome 3, clone RP23-49O22, complete sequence
          Length = 241986

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 282    atattttgccatcttgttttctctt 306
              |||||||| ||||||||||||||||
Sbjct: 139998 atattttggcatcttgttttctctt 140022
to top
>gb|AC158151.4| Mus musculus chromosome 1, clone RP24-315B17, complete sequence
          Length = 184935

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   ttttgccatcttgttttctct 305
             |||||||||||||||||||||
Sbjct: 36357 ttttgccatcttgttttctct 36377
to top
>gb|AC115903.12| Mus musculus chromosome 1, clone RP24-472L18, complete sequence
          Length = 125123

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   ttttgccatcttgttttctct 305
             |||||||||||||||||||||
Sbjct: 21045 ttttgccatcttgttttctct 21065
to top
>gb|AC108935.5| Homo sapiens BAC clone RP11-503L19 from 4, complete sequence
          Length = 133531

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    ccatcttgttttctctttgtt 310
              |||||||||||||||||||||
Sbjct: 113071 ccatcttgttttctctttgtt 113091
to top
>emb|CR392006.7| Zebrafish DNA sequence from clone DKEYP-57F11 in linkage group 3,
             complete sequence
          Length = 99278

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   atcttgttttctctttgtttt 312
             |||||||||||||||||||||
Sbjct: 97411 atcttgttttctctttgtttt 97391
to top
>gb|AC154729.2| Mus musculus BAC clone RP24-377H17 from chromosome 14, complete
             sequence
          Length = 150383

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   ttttgccatcttgttttctct 305
             |||||||||||||||||||||
Sbjct: 27364 ttttgccatcttgttttctct 27384
to top
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a
             protease pseuodogene, complete sequence
          Length = 189417

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 285   ttttgccatcttgttttctct 305
             |||||||||||||||||||||
Sbjct: 38657 ttttgccatcttgttttctct 38637
to top
>emb|BX511115.14| Zebrafish DNA sequence from clone CH211-101B18 in linkage group 19,
              complete sequence
          Length = 169614

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 293    tcttgttttctctttgttttc 313
              |||||||||||||||||||||
Sbjct: 161699 tcttgttttctctttgttttc 161679
to top
>emb|AL929072.8| Zebrafish DNA sequence from clone CH211-140B8, complete sequence
          Length = 160432

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 293    tcttgttttctctttgttttc 313
              |||||||||||||||||||||
Sbjct: 150769 tcttgttttctctttgttttc 150749
to top
>emb|BX936386.9| Zebrafish DNA sequence from clone CH211-232P21 in linkage group 3,
              complete sequence
          Length = 158520

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 292    atcttgttttctctttgtttt 312
              |||||||||||||||||||||
Sbjct: 158388 atcttgttttctctttgtttt 158408
to top
>emb|AL929300.6| Mouse DNA sequence from clone RP23-319O18 on chromosome X, complete
             sequence
          Length = 81871

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 269   caagaagtgatatatattttg 289
             |||||||||||||||||||||
Sbjct: 34478 caagaagtgatatatattttg 34498
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>emb|AL355005.3| Mouse DNA sequence from clone RP21-429M4 on chromosome X, complete
             sequence
          Length = 140069

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 269   caagaagtgatatatattttg 289
             |||||||||||||||||||||
Sbjct: 39225 caagaagtgatatatattttg 39205
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>gb|AC187010.10| Canis Familiaris chromosome 11, clone XX-159O9, complete sequence
          Length = 220429

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ccttccctcaaccaagtttt 53
              ||||||||||||||||||||
Sbjct: 216897 ccttccctcaaccaagtttt 216916
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>emb|AM167904.1| Bordetella avium 197N complete genome
          Length = 3732255

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 308     gttttcaatgggcatgcagaaaac 331
               ||||| ||||||||||||||||||
Sbjct: 2564426 gtttttaatgggcatgcagaaaac 2564449
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>gb|DQ908120.1| Gossypium hirsutum clone LIB5327-042-A1-N1-G3_PS_Gh178
           microsatellite sequence
          Length = 403

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  cctccaccttccctcaacca 47
           ||||||||||||||||||||
Sbjct: 382 cctccaccttccctcaacca 401
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>ref|XM_001167533.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 1 (PTPRK), mRNA
          Length = 5794

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5451 atatatgttgccatcttgttttct 5428
to top
>ref|XM_001167712.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 8 (PTPRK), mRNA
          Length = 6162

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5819 atatatgttgccatcttgttttct 5796
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>ref|XM_001167566.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 2 (PTPRK), mRNA
          Length = 6117

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5774 atatatgttgccatcttgttttct 5751
to top
>ref|XM_001167621.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 4 (PTPRK), mRNA
          Length = 6141

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5798 atatatgttgccatcttgttttct 5775
to top
>ref|XM_001167692.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 7 (PTPRK), mRNA
          Length = 6102

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5759 atatatgttgccatcttgttttct 5736
to top
>ref|XM_001167740.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 9 (PTPRK), mRNA
          Length = 6087

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5744 atatatgttgccatcttgttttct 5721
to top
>ref|XM_001167592.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 3 (PTPRK), mRNA
          Length = 6096

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5753 atatatgttgccatcttgttttct 5730
to top
>ref|XM_001167667.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 6 (PTPRK), mRNA
          Length = 6114

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5771 atatatgttgccatcttgttttct 5748
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>ref|XM_001167645.1| PREDICTED: Pan troglodytes protein tyrosine phosphatase, receptor
            type, K, transcript variant 5 (PTPRK), mRNA
          Length = 6141

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5798 atatatgttgccatcttgttttct 5775
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>gb|AC186998.6| Canis Familiaris chromosome 11, clone XX-402C16, complete sequence
          Length = 199747

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     ccttccctcaaccaagtttt 53
              ||||||||||||||||||||
Sbjct: 176438 ccttccctcaaccaagtttt 176419
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>gb|AC187591.2| Gallus gallus BAC clone CH261-119N12 from chromosome z, complete
             sequence
          Length = 191249

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   catcttgttttctctttgttttca 314
             ||||||||||||| ||||||||||
Sbjct: 89823 catcttgttttctttttgttttca 89846
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     tattttgccatcttgttttc 302
               ||||||||||||||||||||
Sbjct: 2950387 tattttgccatcttgttttc 2950406
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>gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, complete sequence
          Length = 208396

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tctactttgtgaaatcaaag 158
              ||||||||||||||||||||
Sbjct: 174366 tctactttgtgaaatcaaag 174385
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>gb|AC161439.3| Mus musculus chromosome 7, clone RP24-297G19, complete sequence
          Length = 192731

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   catcttgttttctctttgtt 310
             ||||||||||||||||||||
Sbjct: 12642 catcttgttttctctttgtt 12661
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>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone
             OSJNBa0058E19, complete sequence
          Length = 147706

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cctccaccttccctcaacca 47
             ||||||||||||||||||||
Sbjct: 22777 cctccaccttccctcaacca 22796
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>gb|AC101686.8| Mus musculus chromosome 7, clone RP23-200O8, complete sequence
          Length = 164332

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  catcttgttttctctttgtt 310
            ||||||||||||||||||||
Sbjct: 6261 catcttgttttctctttgtt 6242
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>gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosome 14, complete
             sequence
          Length = 192163

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tctactttgtgaaatcaaag 158
             ||||||||||||||||||||
Sbjct: 22721 tctactttgtgaaatcaaag 22740
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>gb|AC092530.35| Rattus norvegicus clone rp32-28p17, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    ttttctctttgttttcaatg 317
              ||||||||||||||||||||
Sbjct: 134397 ttttctctttgttttcaatg 134416
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>ref|NM_002844.2| Homo sapiens protein tyrosine phosphatase, receptor type, K (PTPRK),
            mRNA
          Length = 5982

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5647 atatatgttgccatcttgttttct 5624
to top
>emb|BX927392.9| Zebrafish DNA sequence from clone DKEY-17E11 in linkage group 11,
             complete sequence
          Length = 158543

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   atatatattttgccatcttgtttt 301
             |||||||||||||||| |||||||
Sbjct: 95851 atatatattttgccattttgtttt 95828
to top
>gb|AC078786.22| Homo sapiens 3 BAC RP11-474F17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87072

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 296   tgttttctctttgttttcaatgggcatg 323
             |||||||||||||| ||||| |||||||
Sbjct: 29400 tgttttctctttgtgttcaaagggcatg 29427
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 28       cctccaccttccctcaacca 47
                ||||||||||||||||||||
Sbjct: 10658074 cctccaccttccctcaacca 10658055
to top
>gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197893

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 296   tgttttctctttgttttcaatgggcatg 323
             |||||||||||||| ||||| |||||||
Sbjct: 70877 tgttttctctttgtgttcaaagggcatg 70850
to top
>emb|AL591622.6| Human DNA sequence from clone RP11-141L16 on chromosome 9, complete
             sequence
          Length = 89944

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   atatatattttgccatcttgtttt 301
             |||||||||||| |||||||||||
Sbjct: 35092 atatatattttgacatcttgtttt 35115
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>emb|AL139275.30| Human DNA sequence from clone RP11-552E20 on chromosome 6p12.3-21.2
              Contains the 3' part of a novel gene, the 5' part of a
              novel gene, the 3' part of a novel gene and part of a novel
              gene, complete sequence
          Length = 193126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    accagtgggatgatgataat 388
              ||||||||||||||||||||
Sbjct: 164756 accagtgggatgatgataat 164775
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>emb|AL035470.10|HS480J14 Human DNA sequence from clone RP3-480J14 on chromosome 6q22.2-23.1
             Contains the 3' end of the PTPRK gene for protein tyrosine
             phosphatase receptor type K (R-PTP-KAPPA) and the 5' end
             of the C6orf190 gene, complete sequence
          Length = 105468

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   atatattttgccatcttgttttct 303
             |||||| |||||||||||||||||
Sbjct: 25601 atatatgttgccatcttgttttct 25578
to top
>emb|CR858007.1| Pongo pygmaeus mRNA; cDNA DKFZp469K035 (from clone DKFZp469K035)
          Length = 5999

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5646 atatatgttgccatcttgttttct 5623
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>gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, complete sequence
          Length = 198417

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    cttctactttgtgaaatcaaagaa 160
              ||||||||||||||||| ||||||
Sbjct: 168142 cttctactttgtgaaattaaagaa 168165
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>emb|CR749277.1| Homo sapiens mRNA; cDNA DKFZp686C2268 (from clone DKFZp686C2268)
          Length = 6038

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5685 atatatgttgccatcttgttttct 5662
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>dbj|AB012245.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRA19
          Length = 86722

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tcttgttttctctttgtttt 312
             ||||||||||||||||||||
Sbjct: 78687 tcttgttttctctttgtttt 78668
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>gb|AC092531.16| Rattus norvegicus clone rp32-475b19, complete sequence
          Length = 160215

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    ttttctctttgttttcaatg 317
              ||||||||||||||||||||
Sbjct: 138707 ttttctctttgttttcaatg 138688
to top
>emb|BX647498.1|HSM807644 Homo sapiens mRNA; cDNA DKFZp779N1045 (from clone DKFZp779N1045)
          Length = 2343

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 1990 atatatgttgccatcttgttttct 1967
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>gb|L77886.1|HUMPTPC Human protein tyrosine phosphatase mRNA, complete cds
          Length = 5775

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 280  atatattttgccatcttgttttct 303
            |||||| |||||||||||||||||
Sbjct: 5440 atatatgttgccatcttgttttct 5417
to top
>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096,
              A12197, 12G8, A09100; complete sequence bases 1..217657
          Length = 217657

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    atcttgttttctctttgttt 311
              ||||||||||||||||||||
Sbjct: 161901 atcttgttttctctttgttt 161920
to top
>gb|AC109994.2| Homo sapiens chromosome X clone CTD-2537J14 map q28, complete
            sequence
          Length = 198434

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  atcttgttttctctttgttt 311
            ||||||||||||||||||||
Sbjct: 3281 atcttgttttctctttgttt 3300


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 98,754,853
Number of extensions: 5146543
Number of successful extensions: 104899
Number of sequences better than 10.0: 67
Number of HSP's gapped: 104891
Number of HSP's successfully gapped: 70
Length of query: 540
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 518
Effective length of database: 18,508,616,841
Effective search space: 9587463523638
Effective search space used: 9587463523638
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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