ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf32h01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102803:Os07g0584200 | 31 | 0.57 | 2 | Os04g0601500:Os04g0601500 | 30 | 1.7 | 3 | AK099637:Os08g0507400 | 29 | 2.8 | 4 | AK067905:Os08g0507400 | 29 | 2.8 | 5 | AK072994:Os02g0581700 | 28 | 3.7 | 6 | Os02g0176000:Os02g0176000 | 28 | 4.8 | 7 | AK110368: | 28 | 4.8 | 8 | AK066091:Os03g0200200 | 28 | 4.8 | 9 | AK107533:Os08g0381000 | 28 | 6.3 | 10 | Os04g0688400:Os04g0688400 | 27 | 8.2 | 11 | Os01g0702300:Os01g0702300 | 27 | 8.2 | 12 | AK108657:Os01g0821600 | 27 | 8.2 | 13 | AK102724:Os06g0715600 | 27 | 8.2 | 14 | AK100533:Os04g0443000 | 27 | 8.2 | 15 | AK059304:Os06g0715600 | 27 | 8.2 |
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>AK102803:Os07g0584200 | Length = 555 Score = 31.2 bits (69), Expect = 0.57 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -2 Query: 496 QRRGAKAISRIWC*YCXXXXXXXXRNPQRQA-MNGTIPGKDRKA 368 QRRGA+A++ +W Y P R A + G +P DRK+ Sbjct: 396 QRRGAEAVAELWDRYIAQIVGDPKLRPDRLAELIGVVPAGDRKS 439
>Os04g0601500:Os04g0601500 | Length = 435 Score = 29.6 bits (65), Expect = 1.7 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = -2 Query: 397 GTIPGKDRKATPTGNNPSIFMAKKNIHPSRAAYQYCPR*TLTATHGPEDAPSAKFLDGRR 218 G P DR+ GN+ ++ K AA +YCP + A P A DGRR Sbjct: 48 GGEPAADRRPCDGGNDDTLSPIAKRHRLRPAAAEYCPLASAAAVDIP-----ACVGDGRR 102 Query: 217 HQW 209 +W Sbjct: 103 RRW 105
>AK099637:Os08g0507400 | Length = 463 Score = 28.9 bits (63), Expect = 2.8 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%) Frame = -1 Query: 551 RERFGQHNTRRKRREDNLTTTRR*GYLSHLVLILPTRDCRPATESSASSHERYNPRQGSE 372 RE F +H+ R R TT R G+ S ++ LP+ D R T ++ ++PR + Sbjct: 87 REAFTKHDRRLAARAVPDTTRAR-GFASRSMIWLPSSDPRWKTLRGVAATHVFSPRSLAA 145 Query: 371 SNSDRQQPL-----HLHGK-----EEHSSLQGGVSILSKVNSDG-NPWPRRR 249 + R++ + HL G + + GGV L +++ G W +R Sbjct: 146 ARGVRERKVRDIVGHLAGHAGEVVDVGKVVYGGVLNLRRLDLQGWRRWAEKR 197
>AK067905:Os08g0507400 | Length = 463 Score = 28.9 bits (63), Expect = 2.8 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%) Frame = -1 Query: 551 RERFGQHNTRRKRREDNLTTTRR*GYLSHLVLILPTRDCRPATESSASSHERYNPRQGSE 372 RE F +H+ R R TT R G+ S ++ LP+ D R T ++ ++PR + Sbjct: 87 REAFTKHDRRLAARAVPDTTRAR-GFASRSMIWLPSSDPRWKTLRGVAATHVFSPRSLAA 145 Query: 371 SNSDRQQPL-----HLHGK-----EEHSSLQGGVSILSKVNSDG-NPWPRRR 249 + R++ + HL G + + GGV L +++ G W +R Sbjct: 146 ARGVRERKVRDIVGHLAGHAGEVVDVGKVVYGGVLNLRRLDLQGWRRWAEKR 197
>AK072994:Os02g0581700 | Length = 82 Score = 28.5 bits (62), Expect = 3.7 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -3 Query: 249 PPRPSSSMDGDTSGCILRPGCSKRGGLPPNTHRWQQTTVGARH 121 PP DGD + + GG+PP T RW + T A H Sbjct: 35 PPVKDEDADGDGNP----EASGEGGGVPPVTIRWARITCAASH 73
>Os02g0176000:Os02g0176000 | Length = 222 Score = 28.1 bits (61), Expect = 4.8 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -3 Query: 543 FWPTQHKKKATGRQ--PNNDEALRLSLASGVNTADA*LSSGDGILSVKP*TVQSPARIGK 370 F ++H+++ G + D+A + +S V+TAD+ S+ +V+ V+ R G+ Sbjct: 46 FLASRHRRRRLGVEVVDEEDDARSTASSSCVSTADSASSTAAAAAAVESEDVRRRGRRGR 105 Query: 369 QLRQATTPPSSWQRRTFIPPG 307 + +A W +R + G Sbjct: 106 RAPRAEAVLEGWAKRMGLSSG 126
>AK110368: | Length = 739 Score = 28.1 bits (61), Expect = 4.8 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 6/63 (9%) Frame = -3 Query: 381 RIGKQLRQAT--TP----PSSWQRRTFIPPGRRINTVQGKL*RQPMAQKTPPRPSSSMDG 220 RIG LR+AT TP PSS + F+ P R+++T + QP + PPR SSS+ G Sbjct: 197 RIGG-LREATPITPSAPAPSS---QLFLSPQRQMST-DSQPRSQPRSNLLPPRSSSSLHG 251 Query: 219 DTS 211 S Sbjct: 252 QRS 254
>AK066091:Os03g0200200 | Length = 215 Score = 28.1 bits (61), Expect = 4.8 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -3 Query: 270 QPMAQKTP---PRPSSSMDGDTSGCILRPGCSKRGGLPPN 160 +P+A+ +P P+P S +D G P C LPP+ Sbjct: 154 EPVARASPSAAPKPESDIDDHADGEAAEPDCDLEALLPPH 193
>AK107533:Os08g0381000 | Length = 454 Score = 27.7 bits (60), Expect = 6.3 Identities = 17/45 (37%), Positives = 21/45 (46%) Frame = +1 Query: 142 LLPPMCVRRQAAALGAAWPKDAATGVAVHRGTWPRGRLLGHGLPS 276 L PP+ + L WP+ H + PR RLL HGLPS Sbjct: 37 LQPPL-----SPCLCVGWPR--------HHLSRPRSRLLSHGLPS 68
>Os04g0688400:Os04g0688400 | Length = 318 Score = 27.3 bits (59), Expect = 8.2 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -3 Query: 390 SPARIGKQLRQATTPPSSWQRRTFIPPGRRINTVQGKL*RQPMAQKTPPRPSSS 229 +P ++ R A PPS + F+PP RR + A +PP PS S Sbjct: 231 APPLSHRRHRAAAPPPSCCRAAAFVPPCRRPSVPH-------RAPSSPPPPSPS 277
>Os01g0702300:Os01g0702300 | Length = 735 Score = 27.3 bits (59), Expect = 8.2 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Frame = +1 Query: 160 VRRQAAALGAAWPKDAATGVA-----VHRGTWPRGRLLGHGLPSEFTLDSIDTPPWRDEC 324 + R AA GA W A GV V G WP ++ ++D+ Sbjct: 69 LERNGAATGA-WKDAAKYGVDAIIGNVDTGVWP------------------ESASFKDDG 109 Query: 325 SSLP*RWRGCCLS 363 S+P RWRG C++ Sbjct: 110 YSVPSRWRGKCIT 122
>AK108657:Os01g0821600 | Length = 280 Score = 27.3 bits (59), Expect = 8.2 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +1 Query: 124 SCTDRCLLPPMCVRRQAAALGAAW---PKDAATGVAVHR 231 +C D L+PP + A++ AAW ++ A+ +AV R Sbjct: 183 ACRDGELMPPAVINSGASSFAAAWNMASREPASSLAVER 221
>AK102724:Os06g0715600 | Length = 388 Score = 27.3 bits (59), Expect = 8.2 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +1 Query: 268 LPSEFTLDSIDTPPWRDECSSLP*RWRGCCLSELLSDPCRGLYRSWLDAEDSVAGRQ 438 L S F++D + PPW D G C++E L + L ++A S+ R+ Sbjct: 229 LKSFFSVDDVKLPPWLD----------GMCMAEYLPNLEENLKIQVVEASASIGSRR 275
>AK100533:Os04g0443000 | Length = 691 Score = 27.3 bits (59), Expect = 8.2 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 398 VHGLTLRIPSPDDSHASAVLTPDARDXXXXXXXXGCLPVAFFL 526 + +TL+ +P + HA+AVLTP A C +F L Sbjct: 506 LQSITLKTATPMERHAAAVLTPYAFSKLQDELVVACQYASFHL 548
>AK059304:Os06g0715600 | Length = 388 Score = 27.3 bits (59), Expect = 8.2 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +1 Query: 268 LPSEFTLDSIDTPPWRDECSSLP*RWRGCCLSELLSDPCRGLYRSWLDAEDSVAGRQ 438 L S F++D + PPW D G C++E L + L ++A S+ R+ Sbjct: 229 LKSFFSVDDVKLPPWLD----------GMCMAEYLPNLEENLKIQVVEASASIGSRR 275 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,962,685 Number of extensions: 501184 Number of successful extensions: 1848 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1844 Number of HSP's successfully gapped: 15 Length of query: 204 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 108 Effective length of database: 11,555,919 Effective search space: 1248039252 Effective search space used: 1248039252 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
