ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P43400:MT1_WHEAT Metallothionein-like protein 1 - Triticum aesti... 88 2e-17
2O24528:MT1_FESRU Metallothionein-like protein 1 - Festuca rubra ... 56 1e-07
3Q40633:MT1A_ORYSA Metallothionein-like protein 1A - Oryza sativa... 48 2e-05
4Q2QNE8:MT4B_ORYSJ Metallothionein-like protein 4B - Oryza sativa... 38 0.023
5P30571:MT1_MAIZE Metallothionein-like protein 1 - Zea mays (Maize) 38 0.030
6P26571:MT1_HORVU Metallothionein-like protein 1 - Hordeum vulgar... 38 0.030
7Q10N03:MT1B_ORYSJ Metallothionein-like protein 1B - Oryza sativa... 37 0.040
8Q2QNC3:MT4C_ORYSJ Metallothionein-like protein 4C - Oryza sativa... 35 0.15
9Q0IMG5:MT4A_ORYSJ Metallothionein-like protein 4A - Oryza sativa... 33 0.98

>P43400:MT1_WHEAT Metallothionein-like protein 1 - Triticum aestivum (Wheat)|
          Length = 75
 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCS 279
           KMYPDLTEQGSA AQVAAVVVLG+APENKAGQFEVAAGQSGEGCS
Sbjct: 19  KMYPDLTEQGSAAAQVAAVVVLGVAPENKAGQFEVAAGQSGEGCS 63



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>O24528:MT1_FESRU Metallothionein-like protein 1 - Festuca rubra (Red fescue)|
          Length = 70

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGC 276
           KMYPDL EQ S T Q  AVVV+G+A ENKAGQFE+A   SGEGC
Sbjct: 19  KMYPDLDEQASTTTQ--AVVVVGVAHENKAGQFEMA---SGEGC 57



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>Q40633:MT1A_ORYSA Metallothionein-like protein 1A - Oryza sativa (Rice)|
          Length = 74

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 279
           K YPDL E+ S+T    A VVLG+APE KA QFE AA  G++  GCS
Sbjct: 19  KKYPDLEEKSSSTK---ATVVLGVAPEKKAQQFEAAAESGETAHGCS 62



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>Q2QNE8:MT4B_ORYSJ Metallothionein-like protein 4B - Oryza sativa subsp. japonica|
           (Rice)
          Length = 79

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGE------GCS 279
           KMYPDL E+   T    A  VLG+APE   G FEV  G++ E      GCS
Sbjct: 20  KMYPDLAEK-ITTTTTTATTVLGVAPEK--GHFEVMVGKAAESGEAAHGCS 67



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>P30571:MT1_MAIZE Metallothionein-like protein 1 - Zea mays (Maize)|
          Length = 76

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAG-QFEVAAGQSGE---GCS 279
           K YPDL E  +A       VVLG+APE KA  +F  AA +SGE   GCS
Sbjct: 19  KKYPDLEETSTAAQPT---VVLGVAPEKKAAPEFVEAAAESGEAAHGCS 64



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>P26571:MT1_HORVU Metallothionein-like protein 1 - Hordeum vulgare (Barley)|
          Length = 74

 Score = 37.7 bits (86), Expect = 0.030
 Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 279
           KMYPDL E+  AT QV  V+VLG+   +   QFE AA  G++  GCS
Sbjct: 19  KMYPDLEEKSGATMQV-TVIVLGVG--SAKVQFEEAAEFGEAAHGCS 62



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>Q10N03:MT1B_ORYSJ Metallothionein-like protein 1B - Oryza sativa subsp. japonica|
           (Rice)
          Length = 72

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGC 276
           KMYPDL E+ S+     A VVLG+APE    +    +G++  GC
Sbjct: 19  KMYPDLEEKSSSAQ---ATVVLGVAPEKAHFEAAAESGETAHGC 59



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>Q2QNC3:MT4C_ORYSJ Metallothionein-like protein 4C - Oryza sativa subsp. japonica|
           (Rice)
          Length = 78

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +1

Query: 145 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGE---GCS 279
           KMYPDL E+   T    A  VLG+APE    +    A +SGE   GCS
Sbjct: 20  KMYPDLAEK-ITTTTTTATTVLGVAPEKGHSEGVGKAAESGEAAHGCS 66



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>Q0IMG5:MT4A_ORYSJ Metallothionein-like protein 4A - Oryza sativa subsp. japonica|
           (Rice)
          Length = 78

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 148 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFE-----VAAGQSGEGCS 279
           MYPDL E+   T   +A +VLG+AP  +  QFE       +G++  GCS
Sbjct: 23  MYPDLAEK---TTNTSATMVLGVAPAKE--QFEGVGKAAESGEAAHGCS 66


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 68,123,127
Number of extensions: 1071150
Number of successful extensions: 2581
Number of sequences better than 10.0: 9
Number of HSP's gapped: 2571
Number of HSP's successfully gapped: 9
Length of query: 195
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 88
Effective length of database: 71,336,874
Effective search space: 6277644912
Effective search space used: 6277644912
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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