| Clone Name | FLbaf29i03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072771:Os07g0564200 | 156 | 9e-39 | 2 | AK111110:Os06g0660400 | 33 | 0.20 | 3 | AK111371:Os08g0230600 | 31 | 0.76 | 4 | AK069032:Os03g0853700 | 30 | 0.99 | 5 | AK109595:Os05g0435400 | 29 | 2.2 | 6 | AK066921:Os04g0606200 | 29 | 2.9 | 7 | AK066753:Os04g0606200 | 29 | 2.9 |
|---|
>AK072771:Os07g0564200 | Length = 76 Score = 156 bits (395), Expect = 9e-39 Identities = 72/74 (97%), Positives = 72/74 (97%) Frame = +2 Query: 140 MVFFCFLVDQRRKVRSSKPAAGICSRCGGCASVADMETATRLCYLLTVHRVTWRAIICTF 319 MVFFCFLVDQRRKVRSSKPAAGICSRCGGCASVADMETATR CYLLTVHR TWRAIICTF Sbjct: 1 MVFFCFLVDQRRKVRSSKPAAGICSRCGGCASVADMETATRFCYLLTVHRATWRAIICTF 60 Query: 320 CGAMLKSYRHYRLY 361 CGAMLKSYRHYRLY Sbjct: 61 CGAMLKSYRHYRLY 74
>AK111110:Os06g0660400 | Length = 68 Score = 32.7 bits (73), Expect = 0.20 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +2 Query: 167 QRRKVRSSKPAAGICSRCGGCASVADMETATRLCYL-LTVHRVTWRAIICTFCGAMLKSY 343 + K+ + A G C CGG + D+E LC+L L ++ R CT C L SY Sbjct: 5 KEEKLLGVQKAPGSCPYCGGGVAATDVEAKWVLCFLPLCLNNK--RRFSCTACNRRLVSY 62
>AK111371:Os08g0230600 | Length = 81 Score = 30.8 bits (68), Expect = 0.76 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = +2 Query: 167 QRRKVRSSKPAAGICSRCGGCASVADMETATRLCYL 274 + + +S+ A G C RCGG D+E++ R+ L Sbjct: 17 EEERETASRKAPGACPRCGGAVVATDVESSRRILCL 52
>AK069032:Os03g0853700 | Length = 955 Score = 30.4 bits (67), Expect = 0.99 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Frame = -2 Query: 484 QMEQTKLAGTYMHAPPPSANGT------RVETAVARADQSASTTAGLVEPVV 347 Q L G+ M APPP T R+ A A + +TTA VEPVV Sbjct: 135 QKNARPLPGSLMRAPPPPPPPTAEAPRQRLPGAAASPAPATNTTAAAVEPVV 186
>AK109595:Os05g0435400 | Length = 112 Score = 29.3 bits (64), Expect = 2.2 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 182 RSSKPAAGICSRCGGCASVADMETATRLCYLLTVHRVTWR--AIICTFCGAM 331 R K AA C RCGG A + + E +L + + V R + A +C CG + Sbjct: 15 RVLKEAARRCLRCGGAADLVETEKVLKL-FFVPVKRWPGKDPAYLCRECGLL 65
>AK066921:Os04g0606200 | Length = 71 Score = 28.9 bits (63), Expect = 2.9 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +2 Query: 176 KVRSSKPAAGICSRCGGCASVADMETATR-LCYLLTVHRVTWRAIICTFC 322 +V + A G C RCGG D+E+ R LC L V + R C+ C Sbjct: 15 RVVGTHKAPGACPRCGGAVVATDVESERRILCLPLCVK--SKRKYSCSRC 62
>AK066753:Os04g0606200 | Length = 71 Score = 28.9 bits (63), Expect = 2.9 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +2 Query: 176 KVRSSKPAAGICSRCGGCASVADMETATR-LCYLLTVHRVTWRAIICTFC 322 +V + A G C RCGG D+E+ R LC L V + R C+ C Sbjct: 15 RVVGTHKAPGACPRCGGAVVATDVESERRILCLPLCVK--SKRKYSCSRC 62 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,592,720 Number of extensions: 340075 Number of successful extensions: 1138 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1136 Number of HSP's successfully gapped: 7 Length of query: 207 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 111 Effective length of database: 11,555,919 Effective search space: 1282707009 Effective search space used: 1282707009 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)