| Clone Name | FLbaf29i03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001066537.1| Oryza sativa (japonica cultivar-group) Os07g0564200 (Os07g0564200) mRNA, complete cds Length = 597 Score = 305 bits (154), Expect = 1e-79 Identities = 205/222 (92%) Strand = Plus / Plus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 |||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| Sbjct: 78 atggtgttcttctgcttcttggtggaccagaggaggaaggtccggagcagcaagccggcg 137 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatggagacggccacc 259 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 138 gcggggatctgctcgcggtgcggcgggtgcgcgagcgtggcggacatggagacggcgacg 197 Query: 260 cggctctgctacctcctcaccgtgcaccgcgtcacctggcgcgccatcatctgcaccttc 319 || |||||||||| |||||||||||| | | ||| |||||||||||||||||||||||| Sbjct: 198 cgcttctgctacctgctcaccgtgcacagggccacgtggcgcgccatcatctgcaccttc 257 Query: 320 tgcggcgccatgctcaagtcctaccgccactaccggctctac 361 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 258 tgcggcgccatgctcaagtcctaccgccactacaggctctac 299
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 305 bits (154), Expect = 1e-79 Identities = 205/222 (92%) Strand = Plus / Minus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 |||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| Sbjct: 22548716 atggtgttcttctgcttcttggtggaccagaggaggaaggtccggagcagcaagccggcg 22548657 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatggagacggccacc 259 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 22548656 gcggggatctgctcgcggtgcggcgggtgcgcgagcgtggcggacatggagacggcgacg 22548597 Query: 260 cggctctgctacctcctcaccgtgcaccgcgtcacctggcgcgccatcatctgcaccttc 319 || |||||||||| |||||||||||| | | ||| |||||||||||||||||||||||| Sbjct: 22548596 cgcttctgctacctgctcaccgtgcacagggccacgtggcgcgccatcatctgcaccttc 22548537 Query: 320 tgcggcgccatgctcaagtcctaccgccactaccggctctac 361 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 22548536 tgcggcgccatgctcaagtcctaccgccactacaggctctac 22548495
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 305 bits (154), Expect = 1e-79 Identities = 205/222 (92%) Strand = Plus / Minus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 |||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| Sbjct: 92204 atggtgttcttctgcttcttggtggaccagaggaggaaggtccggagcagcaagccggcg 92145 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatggagacggccacc 259 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 92144 gcggggatctgctcgcggtgcggcgggtgcgcgagcgtggcggacatggagacggcgacg 92085 Query: 260 cggctctgctacctcctcaccgtgcaccgcgtcacctggcgcgccatcatctgcaccttc 319 || |||||||||| |||||||||||| | | ||| |||||||||||||||||||||||| Sbjct: 92084 cgcttctgctacctgctcaccgtgcacagggccacgtggcgcgccatcatctgcaccttc 92025 Query: 320 tgcggcgccatgctcaagtcctaccgccactaccggctctac 361 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 92024 tgcggcgccatgctcaagtcctaccgccactacaggctctac 91983
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_E08 Length = 119926 Score = 305 bits (154), Expect = 1e-79 Identities = 205/222 (92%) Strand = Plus / Minus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 |||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| Sbjct: 29098 atggtgttcttctgcttcttggtggaccagaggaggaaggtccggagcagcaagccggcg 29039 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatggagacggccacc 259 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 29038 gcggggatctgctcgcggtgcggcgggtgcgcgagcgtggcggacatggagacggcgacg 28979 Query: 260 cggctctgctacctcctcaccgtgcaccgcgtcacctggcgcgccatcatctgcaccttc 319 || |||||||||| |||||||||||| | | ||| |||||||||||||||||||||||| Sbjct: 28978 cgcttctgctacctgctcaccgtgcacagggccacgtggcgcgccatcatctgcaccttc 28919 Query: 320 tgcggcgccatgctcaagtcctaccgccactaccggctctac 361 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 28918 tgcggcgccatgctcaagtcctaccgccactacaggctctac 28877
>dbj|AK072771.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K04, full insert sequence Length = 602 Score = 305 bits (154), Expect = 1e-79 Identities = 205/222 (92%) Strand = Plus / Plus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 |||||||||||||||||| ||||||||||| || ||||||| |||||||||||||||||| Sbjct: 79 atggtgttcttctgcttcttggtggaccagaggaggaaggtccggagcagcaagccggcg 138 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatggagacggccacc 259 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 139 gcggggatctgctcgcggtgcggcgggtgcgcgagcgtggcggacatggagacggcgacg 198 Query: 260 cggctctgctacctcctcaccgtgcaccgcgtcacctggcgcgccatcatctgcaccttc 319 || |||||||||| |||||||||||| | | ||| |||||||||||||||||||||||| Sbjct: 199 cgcttctgctacctgctcaccgtgcacagggccacgtggcgcgccatcatctgcaccttc 258 Query: 320 tgcggcgccatgctcaagtcctaccgccactaccggctctac 361 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 259 tgcggcgccatgctcaagtcctaccgccactacaggctctac 300
>emb|CT985772.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 610 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 ||||||||||||||||| || ||||| ||| | |||||||| |||||||||||| ||| Sbjct: 69 atggtgttcttctgctttcttgtggatcagaagaggaaggtgaagagcagcaagccagcg 128 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatg 247 || || ||||||||| |||||||||| |||||||||| || |||||| Sbjct: 129 gccgggatctgctcgaggtgcggcgggggcgccagcgttgctgacatg 176 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccatcatctgcaccttctgcggcgcca 329 ||||| ||||||||||||||||| |||| Sbjct: 228 gccataatctgcaccttctgcggagcca 255
>emb|CT983629.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 579 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 ||||||||||||||||| || ||||| ||| | |||||||| |||||||||||| ||| Sbjct: 69 atggtgttcttctgctttcttgtggatcagaagaggaaggtgaagagcagcaagccagcg 128 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatg 247 || || ||||||||| |||||||||| |||||||||| || |||||| Sbjct: 129 gccgggatctgctcgaggtgcggcgggggcgccagcgttgctgacatg 176 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccatcatctgcaccttctgcggcgcca 329 ||||| ||||||||||||||||| |||| Sbjct: 228 gccataatctgcaccttctgcggagcca 255
>emb|CT981870.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 579 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 140 atggtgttcttctgcttcctggtggaccagcggcggaaggtgcggagcagcaagccggcg 199 ||||||||||||||||| || ||||| ||| | |||||||| |||||||||||| ||| Sbjct: 69 atggtgttcttctgctttcttgtggatcagaagaggaaggtgaagagcagcaagccagcg 128 Query: 200 gcgggcatctgctcgcggtgcggcggctgcgccagcgtggcggacatg 247 || || ||||||||| |||||||||| |||||||||| || |||||| Sbjct: 129 gccgggatctgctcgaggtgcggcgggggcgccagcgttgctgacatg 176 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 gccatcatctgcaccttctgcggcgcca 329 ||||| ||||||||||||||||| |||| Sbjct: 228 gccataatctgcaccttctgcggagcca 255
>gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, complete sequence Length = 180682 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 262 gctctgctacctcctcaccgtgca 285 |||||||||||||||||||||||| Sbjct: 37403 gctctgctacctcctcaccgtgca 37380
>gb|AC018714.4| Homo sapiens BAC clone RP11-382A18 from 8, complete sequence Length = 176760 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 262 gctctgctacctcctcaccgtgca 285 |||||||||||||||||||||||| Sbjct: 120518 gctctgctacctcctcaccgtgca 120495
>dbj|AP005662.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1205G3, complete sequence Length = 108147 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 262 gctctgctacctcctcaccgtgca 285 |||||||||||||||||||||||| Sbjct: 35742 gctctgctacctcctcaccgtgca 35719
>gb|DQ008769.1| Hedycarya arborea large subunit ribosomal RNA gene, partial sequence; mitochondrial Length = 3451 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 gaaggtgcggagcagcaagccggcgg 200 ||||| |||||||||||||||||||| Sbjct: 751 gaaggagcggagcagcaagccggcgg 776
>ref|NM_001061360.1| Oryza sativa (japonica cultivar-group) Os05g0183300 (Os05g0183300) mRNA, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 gagcagcaagccggcggcggg 204 ||||||||||||||||||||| Sbjct: 1024 gagcagcaagccggcggcggg 1044
>gb|AC186044.2| Pan troglodytes BAC clone CH251-4C19 from chromosome 7, complete sequence Length = 175876 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 gcttattaatttgtgttttta 504 ||||||||||||||||||||| Sbjct: 145140 gcttattaatttgtgttttta 145120
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 ggcatctgctcgcggtgcggc 223 ||||||||||||||||||||| Sbjct: 3173793 ggcatctgctcgcggtgcggc 3173813
>ref|XM_632242.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0219207) mRNA, complete cds Length = 2265 Score = 42.1 bits (21), Expect = 2.3 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 50 ccaccaccaccaggcaccatcatcaaatacctc 82 |||||||||||| ||||||||||||||||||| Sbjct: 1738 ccaccaccaccac-caccatcatcaaatacctc 1769
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 gagcagcaagccggcggcggg 204 ||||||||||||||||||||| Sbjct: 62035 gagcagcaagccggcggcggg 62015
>gb|AC006610.1| Caenorhabditis elegans cosmid C30F12, complete sequence Length = 45867 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 ttggcgcggaaggaggagcggcggc 139 |||||||||||| |||||||||||| Sbjct: 1956 ttggcgcggaagcaggagcggcggc 1980
>gb|AC162871.2| Mus musculus chromosome 1, clone RP24-330F8, complete sequence Length = 126140 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ttgtggtcttatgtacatata 573 ||||||||||||||||||||| Sbjct: 23202 ttgtggtcttatgtacatata 23222
>gb|AC160460.5| Mus musculus chromosome 8, clone RP23-15B11, complete sequence Length = 213301 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcttctgcttcctggtggacc 167 ||||||||||||||||||||| Sbjct: 47180 tcttctgcttcctggtggacc 47160
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gccatgctcaagtcctaccgccact 350 |||||||||||| |||||||||||| Sbjct: 4005549 gccatgctcaaggcctaccgccact 4005573
>dbj|AK090295.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630039L02 product:neuro-oncological ventral antigen 1, full insert sequence Length = 1672 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gcggaaggaggagcggcggca 140 ||||||||||||||||||||| Sbjct: 280 gcggaaggaggagcggcggca 300
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 gagcagcaagccggcggcggg 204 ||||||||||||||||||||| Sbjct: 4967450 gagcagcaagccggcggcggg 4967430
>gb|AC023122.9| Homo sapiens BAC clone RP11-297L21 from 3, complete sequence Length = 178642 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 gcttattaatttgtgttttta 504 ||||||||||||||||||||| Sbjct: 104681 gcttattaatttgtgttttta 104701
>gb|AC124526.6| Mus musculus BAC clone RP23-406P13 from chromosome 18, complete sequence Length = 203854 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 537 ttgttgcactggattcttgtg 557 ||||||||||||||||||||| Sbjct: 157653 ttgttgcactggattcttgtg 157673
>emb|AL645606.22| Mouse DNA sequence from clone RP23-374K2 on chromosome 1, complete sequence Length = 193458 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 474 tgctccatctgcttattaatttgtgtttt 502 ||||||||||| |||||| |||||||||| Sbjct: 163978 tgctccatctgtttattagtttgtgtttt 164006
>gb|AF148629.1|AF148629 Oryza schlechteri alcohol dehydrogenase II (Adh2) gene, exons 3 through 7, partial cds Length = 1683 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 540 ttgcactggattcttgtggtc 560 ||||||||||||||||||||| Sbjct: 1586 ttgcactggattcttgtggtc 1566
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 tcttctgcttcctggtggacc 167 ||||||||||||||||||||| Sbjct: 132552 tcttctgcttcctggtggacc 132532
>emb|AL808119.6| Mouse DNA sequence from clone RP23-70J9 on chromosome 2, complete sequence Length = 228870 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ttttgtttgctccatctgctt 487 ||||||||||||||||||||| Sbjct: 85374 ttttgtttgctccatctgctt 85354
>emb|AL592303.15| Mouse DNA sequence from clone RP23-238L2 on chromosome 1, complete sequence Length = 146855 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 553 ttgtggtcttatgtacatata 573 ||||||||||||||||||||| Sbjct: 19883 ttgtggtcttatgtacatata 19903
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 cggtgcggcggctgcgccagcgtg 238 |||||||||||||||||| ||||| Sbjct: 238073 cggtgcggcggctgcgccggcgtg 238050
>emb|CR855081.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0113C11, complete sequence Length = 80243 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgcggaaggaggagcggcg 137 |||||||||||||||||||| Sbjct: 74508 gcgcggaaggaggagcggcg 74489
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gagcagcaagccggcggcgg 203 |||||||||||||||||||| Sbjct: 2156994 gagcagcaagccggcggcgg 2156975
>ref|NM_076430.3| Caenorhabditis elegans T07F12.2 (T07F12.2) mRNA, complete cds Length = 1172 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 agttttgtttgctccatctg 484 |||||||||||||||||||| Sbjct: 456 agttttgtttgctccatctg 437
>ref|NM_001074750.1| Oryza sativa (japonica cultivar-group) Os11g0598900 (Os11g0598900) mRNA, complete cds Length = 2937 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gagcttggcgcggaaggagg 130 |||||||||||||||||||| Sbjct: 846 gagcttggcgcggaaggagg 827
>ref|NM_001052498.1| Oryza sativa (japonica cultivar-group) Os02g0159800 (Os02g0159800) mRNA, complete cds Length = 1544 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtggcggacatggagacgg 254 |||||||||||||||||||| Sbjct: 460 cgtggcggacatggagacgg 441
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 agcggcggaaggtgcggagc 187 |||||||||||||||||||| Sbjct: 4489897 agcggcggaaggtgcggagc 4489878
>gb|DQ144205.1| Falco biarmicus biarmicus isolate F.b.bia18 pseudo-control region genomic sequence; mitochondrial Length = 172 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ttgtggtcttatgtacatat 572 |||||||||||||||||||| Sbjct: 109 ttgtggtcttatgtacatat 90
>gb|U29154.1| Caenorhabditis elegans cosmid T07F12, complete sequence Length = 26663 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 agttttgtttgctccatctg 484 |||||||||||||||||||| Sbjct: 15902 agttttgtttgctccatctg 15883
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 gccggcggcgggcatctgctcgcg 216 ||||||||||| |||||||||||| Sbjct: 2490099 gccggcggcggccatctgctcgcg 2490076
>gb|AC011809.2| Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete sequence Length = 108767 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tgcttattaatttgtgtttt 502 |||||||||||||||||||| Sbjct: 34529 tgcttattaatttgtgtttt 34510
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gagcttggcgcggaaggagg 130 |||||||||||||||||||| Sbjct: 72208 gagcttggcgcggaaggagg 72189
>gb|AC093813.3| Homo sapiens BAC clone RP11-362B23 from 7, complete sequence Length = 120466 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gcttattaatttgtgttttt 503 |||||||||||||||||||| Sbjct: 32370 gcttattaatttgtgttttt 32389
>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence Length = 209459 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 atctgcttattaatttgtgt 499 |||||||||||||||||||| Sbjct: 106699 atctgcttattaatttgtgt 106718
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cggcggcgggcatctgctcg 214 |||||||||||||||||||| Sbjct: 4911825 cggcggcgggcatctgctcg 4911844
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttctgcggcgccatgctca 335 |||||||||||||||||||| Sbjct: 821013 cttctgcggcgccatgctca 821032
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 tgctcgcggtgcggcggctgcgcc 232 |||||||||||| ||||||||||| Sbjct: 1814931 tgctcgcggtgccgcggctgcgcc 1814908
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 aagccggcggcgggcatctgctcg 214 |||||| ||||||||||||||||| Sbjct: 3181764 aagccgccggcgggcatctgctcg 3181741
>gb|AC158757.6| Mus musculus chromosome 5, clone RP23-64D3, complete sequence Length = 247058 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gttcttctgcttcctggtgg 164 |||||||||||||||||||| Sbjct: 117310 gttcttctgcttcctggtgg 117329
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tcgcggtgcggcggctgcgc 231 |||||||||||||||||||| Sbjct: 1840760 tcgcggtgcggcggctgcgc 1840779
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ggcagatcgcacaggcggcg 21 |||||||||||||||||||| Sbjct: 9967380 ggcagatcgcacaggcggcg 9967399
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 gagcttggcgcggaaggagg 130 |||||||||||||||||||| Sbjct: 22034212 gagcttggcgcggaaggagg 22034193
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgcggaaggaggagcggcg 137 |||||||||||||||||||| Sbjct: 11929875 gcgcggaaggaggagcggcg 11929856
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtggcggacatggagacgg 254 |||||||||||||||||||| Sbjct: 3228138 cgtggcggacatggagacgg 3228119
>emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chromosome 6, complete sequence Length = 120745 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cttattaatttgtgttttta 504 |||||||||||||||||||| Sbjct: 89549 cttattaatttgtgttttta 89568
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gttttgtttgctccatctgc 485 |||||||||||||||||||| Sbjct: 66286 gttttgtttgctccatctgc 66305
>ref|NM_009109.1| Mus musculus ryanodine receptor 1, skeletal muscle (Ryr1), mRNA gb|AY268935.1| Mus musculus ryanodine receptor (Ryr1) mRNA, complete cds Length = 15358 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 4862 gcggcatgatgttcttctgcttcc 4839
>gb|U72693.1|RCU72693 Ricinus communis phospholipase D gene, complete cds Length = 5676 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attgcactgtccaccaccac 59 |||||||||||||||||||| Sbjct: 3189 attgcactgtccaccaccac 3170
>ref|NM_001001534.1| Sus scrofa ryanodine receptor 1 (RYR1), mRNA gb|M91452.1|PIGRYRN Sus scrofa Yorkshire ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 4852 gcggcatgatgttcttctgcttcc 4829
>gb|M91451.1|PIGRYRMH Sus scrofa Belgisch Landras/Pietrain ryanodine receptor (RYR1) mRNA, complete cds Length = 15378 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 4852 gcggcatgatgttcttctgcttcc 4829
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tcgcggtgcggcggctgcgc 231 |||||||||||||||||||| Sbjct: 1194723 tcgcggtgcggcggctgcgc 1194704 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 213 cgcggtgcggcggctgcgccagcg 236 ||||||||||| |||||||||||| Sbjct: 3569764 cgcggtgcggcagctgcgccagcg 3569741
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 gcgcggaaggaggagcggcg 137 |||||||||||||||||||| Sbjct: 98470 gcgcggaaggaggagcggcg 98451
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtggcggacatggagacgg 254 |||||||||||||||||||| Sbjct: 100325 cgtggcggacatggagacgg 100306
>gb|AC012353.6| Homo sapiens BAC clone RP11-82P18 from 2, complete sequence Length = 203755 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctctgctacctcctcaccgt 282 |||||||||||||||||||| Sbjct: 83581 ctctgctacctcctcaccgt 83562
>dbj|AK119764.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H06, full insert sequence Length = 1544 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cgtggcggacatggagacgg 254 |||||||||||||||||||| Sbjct: 460 cgtggcggacatggagacgg 441
>dbj|AK105848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G06, full insert sequence Length = 1722 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cgtggcggacatggagacgg 254 |||||||||||||||||||| Sbjct: 1152 cgtggcggacatggagacgg 1171
>gb|AC112933.16| Mus musculus chromosome 5, clone RP24-418J2, complete sequence Length = 172244 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gttcttctgcttcctggtgg 164 |||||||||||||||||||| Sbjct: 148395 gttcttctgcttcctggtgg 148414
>emb|AL805978.10| Mouse DNA sequence from clone RP23-344I3 on chromosome X, complete sequence Length = 190744 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 cactgtccaccaccaccaggcaccatca 71 |||||||||||||||||| |||||||| Sbjct: 51663 cactgtccaccaccaccatccaccatca 51636
>gb|AC101945.33| Mus musculus chromosome 15, clone RP24-123O20, complete sequence Length = 184305 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tctgcttcctggtggaccag 169 |||||||||||||||||||| Sbjct: 89708 tctgcttcctggtggaccag 89689
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ggcagatcgcacaggcggcg 21 |||||||||||||||||||| Sbjct: 90694 ggcagatcgcacaggcggcg 90675
>emb|X62880.1|SSCRCRNA S.scrofa mRNA for calcium release channel (CRC) Length = 15253 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 4720 gcggcatgatgttcttctgcttcc 4697
>gb|L33686.1|RCCPLD Ricinus communis phospholipase D mRNA, complete cds Length = 2808 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attgcactgtccaccaccac 59 |||||||||||||||||||| Sbjct: 1185 attgcactgtccaccaccac 1166
>emb|AL845173.4| Mouse DNA sequence from clone RP23-322G1 on chromosome 2, complete sequence Length = 194770 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 gttttgtttgctccatctgc 485 |||||||||||||||||||| Sbjct: 72590 gttttgtttgctccatctgc 72609
>emb|X15209.1|OCRYAN O.cuniculus mRNA for skeletal muscle ryanodine receptor Length = 15823 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 5316 gcggcatgatgttcttctgcttcc 5293
>emb|X15750.1|OCRRR Rabbit skeletal muscle mRNA for ryanodine receptor Length = 15361 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gcggcatggtgttcttctgcttcc 158 |||||||| ||||||||||||||| Sbjct: 4854 gcggcatgatgttcttctgcttcc 4831 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 98,792,580 Number of extensions: 5935678 Number of successful extensions: 126739 Number of sequences better than 10.0: 75 Number of HSP's gapped: 126739 Number of HSP's successfully gapped: 79 Length of query: 623 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 601 Effective length of database: 18,508,616,841 Effective search space: 11123678721441 Effective search space used: 11123678721441 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)