ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf26k21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P10541:E1A_ADE40 Early E1A 27 kDa protein - Human adenovirus 40 ... 32 2.3
2Q1RMR2:RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa - Bo... 31 6.8
3Q8TAX7:MUC7_HUMAN Mucin-7 precursor - Homo sapiens (Human) 30 8.8
4Q8R4K8:PAPP1_MOUSE Pappalysin-1 precursor - Mus musculus (Mouse) 30 8.8

>P10541:E1A_ADE40 Early E1A 27 kDa protein - Human adenovirus 40 (HAdV-40)|
          Length = 249
 Score = 32.3 bits (72), Expect = 2.3
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 8/86 (9%)
 Frame = +1

Query: 19  QATKKQLLH*LLPSRRSQDEERKGRE*YFQRFPRRVKRERSRTEDVHGPITGAGQE---- 186
           +A+++  LH L        EE   +E     FP R+  E     +     +G G+E    
Sbjct: 33  EASEEMSLHDLFDVEVDGFEEDANQEAVDGMFPERLLSEAESAAESGSGDSGVGEELLPV 92

Query: 187 --DLACHR--LPPRPPANSWAEEAEE 252
             DL C+   LPP  P    A EAEE
Sbjct: 93  DLDLKCYEDGLPPSDPETDEATEAEE 118



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>Q1RMR2:RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa - Bos taurus (Bovine)|
          Length = 439

 Score = 30.8 bits (68), Expect = 6.8
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
 Frame = +1

Query: 1   ERRLRRQATKKQLLH*LLPSRRSQDEERKGRE*YFQRFPRRVKRERSRTEDVHGPITGAG 180
           +RR R ++  K+         + +D +RK R     R   R +RER R E++ G   G G
Sbjct: 261 DRRRRSRSRDKEERRRSRERSKDKDRDRKRRS---SRSRERARRERERKEELRGGGGGGG 317

Query: 181 Q--EDLACHRLPP--RPPAN---SWAEEAEEGGEDVRVPRRAHHVGDAE 306
              E       PP   PP        +  EE G D    RR  H  + E
Sbjct: 318 DMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRDRRRSHRSERE 366



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>Q8TAX7:MUC7_HUMAN Mucin-7 precursor - Homo sapiens (Human)|
          Length = 377

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
 Frame = -3

Query: 719 SACVSFSEGSSSD-----RRHHHNS 660
           SAC SFSEG   D     RRHHH S
Sbjct: 14  SACFSFSEGRERDHELRHRRHHHQS 38



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>Q8R4K8:PAPP1_MOUSE Pappalysin-1 precursor - Mus musculus (Mouse)|
          Length = 1624

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +1

Query: 115 PRRVKRERSRTEDVH---GPITGAGQEDLACHRLPPRPPANSWAEEAEEGGEDVRVPRR 282
           PRRV+R+           GP T A +        PP PP  +W        E VRVPRR
Sbjct: 25  PRRVRRDPRAVRPPRPAAGPATCATRAARGRRASPPPPPGGAW--------EAVRVPRR 75


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 137,553,149
Number of extensions: 3120005
Number of successful extensions: 8965
Number of sequences better than 10.0: 4
Number of HSP's gapped: 8957
Number of HSP's successfully gapped: 4
Length of query: 275
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 163
Effective length of database: 69,965,399
Effective search space: 11404360037
Effective search space used: 11404360037
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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