ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf26k08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q10307:YD52_SCHPO Uncharacterized protein C6C3.02c - Schizosacch... 37 0.21
2Q5BAD4:EFR3_EMENI Protein efr3 - Emericella nidulans (Aspergillu... 34 1.4
3P23253:TCNA_TRYCR Sialidase - Trypanosoma cruzi 33 1.8
4O60610:DIAP1_HUMAN Protein diaphanous homolog 1 - Homo sapiens (... 33 1.8
5P38824:COX23_YEAST Cytochrome c oxidase-assembly factor COX23, m... 33 3.0
6Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri 33 3.1
7O08808:DIAP1_MOUSE Protein diaphanous homolog 1 - Mus musculus (... 32 4.0
8Q8NEE0:CB019_HUMAN Putative uncharacterized protein C2orf19 - Ho... 32 5.2
9Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 -... 31 8.9

>Q10307:YD52_SCHPO Uncharacterized protein C6C3.02c - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 172
 Score = 36.6 bits (83), Expect = 0.21
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 23/99 (23%)
 Frame = +2

Query: 734 GTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-------MD 844
           G GSA+ H     + G                P++    +V   A  S  P       + 
Sbjct: 69  GIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPSTFASSAIS 128

Query: 845 NAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 961
             A + C   +K F DCIN +  + S+C +YL+ L  C+
Sbjct: 129 EEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165



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>Q5BAD4:EFR3_EMENI Protein efr3 - Emericella nidulans (Aspergillus nidulans)|
          Length = 1156

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -3

Query: 805  SLMLNGTGTHHSVNSPVR-HSTASTESHALSNSGPNSAHDTATAALGSSRRRSLTGWSWW 629
            +L LNG+ T      PVR H+ A+    ++S + P++AH  ATA L +SRR S+   +  
Sbjct: 848  ALSLNGSRTG---TLPVRGHAHANGTGSSISTNSPSTAH-VATAGLQTSRRMSMPDKTVT 903

Query: 628  VSHRSS 611
             +H SS
Sbjct: 904  PNHNSS 909



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>P23253:TCNA_TRYCR Sialidase - Trypanosoma cruzi|
          Length = 1162

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
 Frame = -3

Query: 286 PCTP-Q*EPRGNP*RP*RS*KDGPPLSP--SRRGSTR*FPSRGTAQRSPELEP*GSRHR- 119
           P TP      G P  P  S   G P +P  S   ST   P+  +A  +P      S H  
Sbjct: 696 PSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHST 755

Query: 118 PSSRTSASCHGTSMRRPSCSALHST-STPR*SS 23
           PS+   +S HGT    P+ S+ HST STP  SS
Sbjct: 756 PSTPVDSSAHGTP-STPADSSAHSTPSTPADSS 787



 Score = 31.2 bits (69), Expect = 8.9
 Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
 Frame = -3

Query: 286  PCTP-Q*EPRGNP*RP*RS*KDGPPLSP--SRRGSTR*FPSRGTAQRSPELEP*GSRHR- 119
            P TP      G P  P  S   G P +P  S   ST   P+  +A  +P      S H  
Sbjct: 912  PSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHST 971

Query: 118  PSSRTSASCHGTSMRRPSCSALHST-STPR*SS 23
            PS+   +S H T    P+ S+ HST STP  SS
Sbjct: 972  PSTPVDSSAHSTP-STPADSSAHSTPSTPADSS 1003



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>O60610:DIAP1_HUMAN Protein diaphanous homolog 1 - Homo sapiens (Human)|
          Length = 1248

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 20/73 (27%), Positives = 37/73 (50%)
 Frame = +1

Query: 70   DDAWRFHDTMQKFLKKADDEILRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 249
            D+  +F + M  F+K A ++  +++   S   +L KE+ EYF  D  K     F  FM +
Sbjct: 1057 DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGEYFLFDPKKLSVEEF--FMDL 1114

Query: 250  RDFLSVLTEVCRE 288
             +F ++  +  +E
Sbjct: 1115 HNFRNMFLQAVKE 1127



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>P38824:COX23_YEAST Cytochrome c oxidase-assembly factor COX23, mitochondrial precursor|
           - Saccharomyces cerevisiae (Baker's yeast)
          Length = 151

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 842 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 964
           D+   D C   SK    C+     D SKCQ Y D   EC++
Sbjct: 97  DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137



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>Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri|
          Length = 255

 Score = 32.7 bits (73), Expect = 3.1
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -1

Query: 291 DLPAHLSENREEIPDDHEDPERMGLLFRRVAVEVLGDFLH 172
           +L   LSE R EI    EDPE+    FRR A EV+ + LH
Sbjct: 213 ELGRKLSELRREIVSSVEDPEKAVREFRRRAEEVIRECLH 252



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>O08808:DIAP1_MOUSE Protein diaphanous homolog 1 - Mus musculus (Mouse)|
          Length = 1255

 Score = 32.3 bits (72), Expect = 4.0
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +1

Query: 70   DDAWRFHDTMQKFLKKADDEILRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 249
            D+  +F + M  F+K A ++  +++   S   +L KE+ +YF  D  K     F  FM +
Sbjct: 1064 DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEF--FMDL 1121

Query: 250  RDFLSVLTEVCRE 288
             +F ++  +  +E
Sbjct: 1122 HNFRNMFLQAVKE 1134



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>Q8NEE0:CB019_HUMAN Putative uncharacterized protein C2orf19 - Homo sapiens (Human)|
          Length = 82

 Score = 32.0 bits (71), Expect = 5.2
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 572 GEPWRVVRAGDGNPRLEAAPEWMSNGSEW 486
           G+ W   R   G+PR+E   EW  NG  W
Sbjct: 41  GQKWGWHRGEPGHPRMEELNEWPQNGDHW 69



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>Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 - Mus musculus (Mouse)|
          Length = 946

 Score = 31.2 bits (69), Expect = 8.9
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 220 PPLSPSRRGSTR*FPSRGTAQRSPELEP*GSRHRPSS 110
           PP  P +R S+   P R T + SP   P   RHRPSS
Sbjct: 368 PPKKPPKRTSS---PPRKTRRLSPSASPPRRRHRPSS 401


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 171,742,039
Number of extensions: 3624754
Number of successful extensions: 12406
Number of sequences better than 10.0: 9
Number of HSP's gapped: 12370
Number of HSP's successfully gapped: 10
Length of query: 398
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 283
Effective length of database: 69,142,514
Effective search space: 19567331462
Effective search space used: 19567331462
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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