| Clone Name | FLbaf26k08 |
|---|---|
| Clone Library Name | barley_pub |
>Q10307:YD52_SCHPO Uncharacterized protein C6C3.02c - Schizosaccharomyces pombe| (Fission yeast) Length = 172 Score = 36.6 bits (83), Expect = 0.21 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 23/99 (23%) Frame = +2 Query: 734 GTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-------MD 844 G GSA+ H + G P++ +V A S P + Sbjct: 69 GIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPSTFASSAIS 128 Query: 845 NAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 961 A + C +K F DCIN + + S+C +YL+ L C+ Sbjct: 129 EEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165
>Q5BAD4:EFR3_EMENI Protein efr3 - Emericella nidulans (Aspergillus nidulans)| Length = 1156 Score = 33.9 bits (76), Expect = 1.4 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Frame = -3 Query: 805 SLMLNGTGTHHSVNSPVR-HSTASTESHALSNSGPNSAHDTATAALGSSRRRSLTGWSWW 629 +L LNG+ T PVR H+ A+ ++S + P++AH ATA L +SRR S+ + Sbjct: 848 ALSLNGSRTG---TLPVRGHAHANGTGSSISTNSPSTAH-VATAGLQTSRRMSMPDKTVT 903 Query: 628 VSHRSS 611 +H SS Sbjct: 904 PNHNSS 909
>P23253:TCNA_TRYCR Sialidase - Trypanosoma cruzi| Length = 1162 Score = 33.5 bits (75), Expect = 1.8 Identities = 34/93 (36%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Frame = -3 Query: 286 PCTP-Q*EPRGNP*RP*RS*KDGPPLSP--SRRGSTR*FPSRGTAQRSPELEP*GSRHR- 119 P TP G P P S G P +P S ST P+ +A +P S H Sbjct: 696 PSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHST 755 Query: 118 PSSRTSASCHGTSMRRPSCSALHST-STPR*SS 23 PS+ +S HGT P+ S+ HST STP SS Sbjct: 756 PSTPVDSSAHGTP-STPADSSAHSTPSTPADSS 787 Score = 31.2 bits (69), Expect = 8.9 Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = -3 Query: 286 PCTP-Q*EPRGNP*RP*RS*KDGPPLSP--SRRGSTR*FPSRGTAQRSPELEP*GSRHR- 119 P TP G P P S G P +P S ST P+ +A +P S H Sbjct: 912 PSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPADSSAHSTPSTPADSSAHST 971 Query: 118 PSSRTSASCHGTSMRRPSCSALHST-STPR*SS 23 PS+ +S H T P+ S+ HST STP SS Sbjct: 972 PSTPVDSSAHSTP-STPADSSAHSTPSTPADSS 1003
>O60610:DIAP1_HUMAN Protein diaphanous homolog 1 - Homo sapiens (Human)| Length = 1248 Score = 33.5 bits (75), Expect = 1.8 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = +1 Query: 70 DDAWRFHDTMQKFLKKADDEILRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 249 D+ +F + M F+K A ++ +++ S +L KE+ EYF D K F FM + Sbjct: 1057 DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGEYFLFDPKKLSVEEF--FMDL 1114 Query: 250 RDFLSVLTEVCRE 288 +F ++ + +E Sbjct: 1115 HNFRNMFLQAVKE 1127
>P38824:COX23_YEAST Cytochrome c oxidase-assembly factor COX23, mitochondrial precursor| - Saccharomyces cerevisiae (Baker's yeast) Length = 151 Score = 32.7 bits (73), Expect = 3.0 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = +2 Query: 842 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 964 D+ D C SK C+ D SKCQ Y D EC++ Sbjct: 97 DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137
>Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri| Length = 255 Score = 32.7 bits (73), Expect = 3.1 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -1 Query: 291 DLPAHLSENREEIPDDHEDPERMGLLFRRVAVEVLGDFLH 172 +L LSE R EI EDPE+ FRR A EV+ + LH Sbjct: 213 ELGRKLSELRREIVSSVEDPEKAVREFRRRAEEVIRECLH 252
>O08808:DIAP1_MOUSE Protein diaphanous homolog 1 - Mus musculus (Mouse)| Length = 1255 Score = 32.3 bits (72), Expect = 4.0 Identities = 19/73 (26%), Positives = 37/73 (50%) Frame = +1 Query: 70 DDAWRFHDTMQKFLKKADDEILRVQAQESVALSLVKEITEYFHGDSAKEEAHPFRIFMVV 249 D+ +F + M F+K A ++ +++ S +L KE+ +YF D K F FM + Sbjct: 1064 DEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEF--FMDL 1121 Query: 250 RDFLSVLTEVCRE 288 +F ++ + +E Sbjct: 1122 HNFRNMFLQAVKE 1134
>Q8NEE0:CB019_HUMAN Putative uncharacterized protein C2orf19 - Homo sapiens (Human)| Length = 82 Score = 32.0 bits (71), Expect = 5.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 572 GEPWRVVRAGDGNPRLEAAPEWMSNGSEW 486 G+ W R G+PR+E EW NG W Sbjct: 41 GQKWGWHRGEPGHPRMEELNEWPQNGDHW 69
>Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 - Mus musculus (Mouse)| Length = 946 Score = 31.2 bits (69), Expect = 8.9 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 220 PPLSPSRRGSTR*FPSRGTAQRSPELEP*GSRHRPSS 110 PP P +R S+ P R T + SP P RHRPSS Sbjct: 368 PPKKPPKRTSS---PPRKTRRLSPSASPPRRRHRPSS 401 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 171,742,039 Number of extensions: 3624754 Number of successful extensions: 12406 Number of sequences better than 10.0: 9 Number of HSP's gapped: 12370 Number of HSP's successfully gapped: 10 Length of query: 398 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 283 Effective length of database: 69,142,514 Effective search space: 19567331462 Effective search space used: 19567331462 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)