>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 2281
 Score =  280 bits (605), Expect(3) = 3e-96
 Identities = 106/125 (84%), Positives = 118/125 (94%)
 Frame = +2 / +3

                                                                       
Query: 185 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 364
           QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 632

                                                                       
Query: 365 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 544
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 633 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 812

                
Query: 545 CEESG 559
           CEESG
Sbjct: 813 CEESG 827



 Score = 70.3 bits (147), Expect(3) = 3e-96
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = +2 / +2

                                             
Query: 44  MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145
           MAP+VMASSAT+VAPFQGLKSTAGLPV+RRSS+S
Sbjct: 206 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSS 307



 Score = 42.3 bits (86), Expect(3) = 3e-96
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +2 / +2

                                
Query: 128 RRSSASLGRVSNGGRIRCMQV 190
           R SS+S G VSNGGRIRCMQV
Sbjct: 293 RSSSSSFGNVSNGGRIRCMQV 355



 Score =  198 bits (427), Expect(3) = 4e-65
 Identities = 87/124 (70%), Positives = 97/124 (78%)
 Frame = -1 / -1

                                                                       
Query: 558 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 379
           PDSSQPGGL AMKL +CTC  LSKPM+RT ASGY          T VASVHPN+GSFH+V
Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647

                                                                       
Query: 378 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLIPS 199
           QY PS*YPG+L  SR T PTLLNS+QGTHL+R R S CF+R+S V GGK DRVSNFL+PS
Sbjct: 646 QYLPS*YPGDL*FSR*TNPTLLNSKQGTHLDRSRYSICFKRSSTVNGGKYDRVSNFLMPS 467

               
Query: 198 IGHT 187
           IGHT
Sbjct: 466 IGHT 455



 Score = 59.3 bits (123), Expect(3) = 4e-65
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -1 / -2

                                      
Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43
           TGRPAVDLSPWKGAT VADEAIT GA+
Sbjct: 285 TGRPAVDLSPWKGATEVADEAITEGAI 205



 Score = 30.4 bits (60), Expect(3) = 4e-65
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2 / -3

                        
Query: 188 PACT*SFRHC*PC 150
           PAC *SFRHC* C
Sbjct: 353 PACI*SFRHC*RC 315



 Score = 90.9 bits (192), Expect(3) = 2e-28
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = +1 / +2

                                                                       
Query: 178 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 357
           + +GVAD*G+ EVRD V+LA    GGP EA  +P P+ VGAL  VQQG +RLP*  Q+ R
Sbjct: 446 IQSGVAD*GH*EVRDSVVLAAIDSGGPFEADRVPAPI*VGALLGVQQGRIRLP*ESQITR 625

                             
Query: 358 VLRRPILDNVEAAYVRMH 411
           +L R +LD+VE A+V MH
Sbjct: 626 IL*R*VLDHVETAHVWMH 679



 Score = 45.1 bits (92), Expect(3) = 2e-28
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +1 / +2

                                             
Query: 469 LRPYHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 570
           LR +H L Q  AGAV QLHR+ ATGLRGVR+ ++
Sbjct: 737 LRSHHWL*QR*AGAVNQLHRV*ATGLRGVRRQLS 838



 Score = 35.4 bits (71), Expect(3) = 2e-28
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1 / +1

                                 
Query: 43  HGPRRDGFVGYHRRTLPGAQVH 108
           +G   DGFVG+ R +LPGAQVH
Sbjct: 205 NGSLGDGFVGHLRGSLPGAQVH 270



 Score = 72.5 bits (152), Expect(4) = 3e-22
 Identities = 32/52 (61%), Positives = 42/52 (80%)
 Frame = -3 / -3

                                                               
Query: 340 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHL 185
           LT DE++LAEL+A HPL ++QV++LLQ+ L  +  QVRQ LELL+ LNRPHL
Sbjct: 608 LTVDESDLAELQARHPLRSEQVLDLLQKVLHCQWRQVRQSLELLNALNRPHL 453



 Score = 42.3 bits (86), Expect(4) = 3e-22
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = -2 / -2

                                           
Query: 554 TPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 459
           TPRNPVA  R*S* TAPA  C+S+*  R+ QG
Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727



 Score = 29.5 bits (58), Expect(4) = 3e-22
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = -2 / -3

                               
Query: 104 T*APGRVRRW*PTKPSRRGP 45
           T*APGR  R  PTKPS R P
Sbjct: 266 T*APGREPRRWPTKPSPREP 207



 Score = 25.8 bits (50), Expect(4) = 3e-22
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3 / -3

                       
Query: 418 GVGASEHRQLPH 383
           G+GAS+H Q PH
Sbjct: 686 GIGASKHGQFPH 651



 Score = 58.8 bits (122), Expect(3) = 6e-18
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = -2 / -2

                                                      
Query: 419 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPT 291
           W RCI+T A ST SS  R S R  C +HGRR +PC*T  +APT
Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRRIRPC*TPSKAPT 559



 Score = 39.6 bits (80), Expect(3) = 6e-18
 Identities = 19/28 (67%), Positives = 20/28 (71%)
 Frame = -3 / -3

                                       
Query: 568 LCLAGLLATRWPEGDEADALHLPQVVEA 485
           L  A LLATRW   DEAD LHLP VV+A
Sbjct: 836 LVAA*LLATRWLIRDEAD*LHLPNVVKA 753



 Score = 29.9 bits (59), Expect(3) = 6e-18
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = -2 / -2

                            
Query: 236 ASKTGSRTS*YPQSATP 186
           AS T SRTS* PQSATP
Sbjct: 504 ASTTESRTS*CPQSATP 454



 Score = 34.1 bits (68), Expect(3) = 5e-06
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = +3 / +1

                            
Query: 186 RCGRLRVSRSSRPCLTC 236
           RCGRLR  RSSR C TC
Sbjct: 454 RCGRLRALRSSRLCRTC 504



 Score = 33.6 bits (67), Expect(3) = 5e-06
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = +3 / +1

                                  
Query: 501 GRCSASASSPSGHRVARSPARHK 569
           GRCS SASS   HRVARS A  K
Sbjct: 769 GRCS*SASSRISHRVARSQAATK 837



 Score = 26.7 bits (52), Expect(3) = 5e-06
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3 / +1

                       
Query: 384 CGSCLCSDAPTP 419
           CG+C C DAP P
Sbjct: 652 CGNCPCLDAPMP 687

>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1193

 Score =  280 bits (606), Expect(3) = 2e-95
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = +2 / +2

                                                                       
Query: 182 MQVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGY 361
           +QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGY
Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGY 523

                                                                       
Query: 362 YDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPP 541
           YDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PP
Sbjct: 524 YDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPP 703

                 
Query: 542 GCEESG 559
           GCEESG
Sbjct: 704 GCEESG 721



 Score = 70.7 bits (148), Expect(3) = 2e-95
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +2 / +2

                                                
Query: 35  YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145
           Y  MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+ S
Sbjct: 83  YVAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS 193



 Score = 38.2 bits (77), Expect(3) = 2e-95
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = +2 / +2

                                   
Query: 128 RRSSASLGRVSNGGRIRCMQVWPI 199
           R +++  G VSNGGRI+CMQV+ I
Sbjct: 179 RSTNSGFGNVSNGGRIKCMQVYMI 250



 Score =  138 bits (295), Expect(4) = 1e-59
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -1 / -3

                                                                       
Query: 420 VASVHPNIGSFHIVQYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVR 241
           VASV PN+GSFH+VQY PS*YPG+L  SR T PTLLNSRQGTHL+R R S CF+R+S V 
Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVS 403

                             
Query: 240 GGK*DRVSNFLIPSIGHT 187
           GG+ DRVSNFL+PSIGHT
Sbjct: 402 GGRYDRVSNFLMPSIGHT 349



 Score = 63.4 bits (132), Expect(4) = 1e-59
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = -1 / -3

                                            
Query: 558 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASG 460
           PDSSQPGGL AMKL +CTC  LSKPMIRT ASG
Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622



 Score = 52.8 bits (109), Expect(4) = 1e-59
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = -1 / -3

                                      
Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43
           TG PAVDLSPW GAT VA+EAIT GA+
Sbjct: 171 TGSPAVDLSPWNGATEVAEEAITVGAI 91



 Score = 33.6 bits (67), Expect(4) = 1e-59
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = -2 / -1

                           
Query: 197 SATPACT*SFRHC*PC 150
           S  PACT*SFRHC* C
Sbjct: 248 SYIPACT*SFRHC*RC 201



 Score =  117 bits (251), Expect(4) = 4e-43
 Identities = 49/78 (62%), Positives = 64/78 (82%)
 Frame = +1 / +1

                                                                       
Query: 178 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 357
           +++GVA+*G+QEVRDP++ AT H GG  EA  +P  +QVGALPRVQQGW+RLP*  Q+ R
Sbjct: 340 IYSGVAN*GHQEVRDPIVPATTHRGGSFEADRVPASIQVGALPRVQQGWIRLP*EPQVSR 519

                             
Query: 358 VLRRPILDNVEAAYVRMH 411
           VLR  +LD+VEAA+VR+H
Sbjct: 520 VLRWQVLDHVEAAHVRLH 573



 Score = 47.3 bits (97), Expect(4) = 4e-43
 Identities = 22/29 (75%), Positives = 22/29 (75%)
 Frame = +1 / +1

                                        
Query: 469 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 555
           L PYHRLRQ  AGAV  LHRLQA  LRGV
Sbjct: 631 LCPYHRLRQRQAGAVD*LHRLQAPRLRGV 717



 Score = 35.4 bits (71), Expect(4) = 4e-43
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1 / +1

                                           
Query: 13  ASSSLQLIQYHGPRRDGFVGYHRRTLPGAQVH 108
           AS     ++ +GP RDG +G+ R ++P AQVH
Sbjct: 61  ASKLAN*LRGYGPHRDGLLGHLRGSIPRAQVH 156



 Score = 30.9 bits (61), Expect(4) = 4e-43
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +1 / +1

                       
Query: 163 WRKDQVHAGVAD 198
           WRKDQVHAG+ D
Sbjct: 214 WRKDQVHAGIYD 249



 Score = 87.7 bits (185), Expect(3) = 1e-27
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -3 / -2

                                                                
Query: 340 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHLH 182
           LT DE+NLAELEA HPLG+ QV++LLQ+ L GE WQVR GLELLD LN PHL+
Sbjct: 502 LTVDESNLAELEARHPLGSKQVLDLLQKILHGEWWQVR*GLELLDALNWPHLN 344



 Score = 46.0 bits (94), Expect(3) = 1e-27
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = -2 / -1

                                            
Query: 557 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 459
           +TPRN  A RR*S* TAPA  CRSR*YG++ +G
Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621



 Score = 28.1 bits (55), Expect(3) = 1e-27
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3 / -2

                       
Query: 418 GVGASEHRQLPH 383
           G+GA+EH QLPH
Sbjct: 580 GIGAAEHGQLPH 545



 Score = 75.8 bits (159), Expect(3) = 1e-20
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = -2 / -1

                                                       
Query: 419 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 288
           W RC RT AAST S+   RSTR +C +HGRR QPC*TRG+APTW
Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRRIQPC*TRGKAPTW 450



 Score = 34.1 bits (68), Expect(3) = 1e-20
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = -3 / -2

                                  
Query: 553 LLATRWPEGDEADALHLPQVVEA 485
           LLAT    GDEA+ LHLP VVEA
Sbjct: 715 LLATWGLVGDEANQLHLPDVVEA 647



 Score = 28.1 bits (55), Expect(3) = 1e-20
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = -2 / -1

                             
Query: 239 VASKTGSRTS*YPQSATP 186
           VA   GSRTS* PQ ATP
Sbjct: 401 VAGTIGSRTS*CPQLATP 348



 Score = 38.2 bits (77), Expect(3) = 3e-07
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +3 / +3

                             
Query: 186 RCGRLRVSRSSRPCLTCH 239
           RCG+LR SRSSRP  TCH
Sbjct: 348 RCGQLRASRSSRPYRTCH 401



 Score = 31.3 bits (62), Expect(3) = 3e-07
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3 / +3

                                    
Query: 501 GRCSASASSPSGHRVARSPARHKLR 575
           GRCS  ASSP+  +VARS    KLR
Sbjct: 663 GRCS*LASSPTSPQVARSLVATKLR 737



 Score = 27.2 bits (53), Expect(3) = 3e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3 / +3

                       
Query: 384 CGSCLCSDAPTP 419
           CGSC CS AP P
Sbjct: 546 CGSCPCSAAPMP 581

>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1344

 Score =  280 bits (605), Expect(3) = 8e-95
 Identities = 106/125 (84%), Positives = 118/125 (94%)
 Frame = +2 / +3

                                                                       
Query: 185 QVWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYY 364
           QVWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYY
Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYY 647

                                                                       
Query: 365 DGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPG 544
           DGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPG
Sbjct: 648 DGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 827

                
Query: 545 CEESG 559
           CEESG
Sbjct: 828 CEESG 842



 Score = 68.4 bits (143), Expect(3) = 8e-95
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +2 / +3

                                             
Query: 44  MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145
           MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+++
Sbjct: 207 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSA 308



 Score = 39.1 bits (79), Expect(3) = 8e-95
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +2 / +3

                                
Query: 128 RRSSASLGRVSNGGRIRCMQV 190
           R +SA LG VSNGGRI CMQV
Sbjct: 294 RSNSAGLGSVSNGGRISCMQV 356



 Score =  203 bits (438), Expect(2) = 2e-61
 Identities = 89/125 (71%), Positives = 98/125 (78%)
 Frame = -1 / -3

                                                                       
Query: 558 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 379
           PDSSQPGGL AMKL +CTC  LSKPM+RT ASGY          T VASVHPNIGSFH+V
Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662

                                                                       
Query: 378 QYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLIPS 199
           QY PS*YPG+L  SR T PTLLNSRQGTHL+R R S CF+R+S V GG+ DRVSNFL+PS
Sbjct: 661 QYLPS*YPGDLWFSR*TNPTLLNSRQGTHLDRSRYSICFKRSSTVSGGRYDRVSNFLMPS 482

                
Query: 198 IGHTC 184
           IGHTC
Sbjct: 481 IGHTC 467



 Score = 57.0 bits (118), Expect(2) = 2e-61
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -1 / -3

                                      
Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43
           TG PAVDLSPWKGAT VADEAIT GA+
Sbjct: 286 TGSPAVDLSPWKGATEVADEAITVGAI 206



 Score = 94.1 bits (199), Expect(3) = 8e-31
 Identities = 47/76 (61%), Positives = 56/76 (73%)
 Frame = +1 / +2

                                                                       
Query: 184 AGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPRVL 363
           AGVAD* +QEV DPV+ AT H  GP EA  +P P+Q+GALPRV  G +RLP*  Q+  VL
Sbjct: 467 AGVAD*RHQEV*DPVVPATAHGRGPLEADRVPAPVQMGALPRV**GRVRLP*EPQVSWVL 646

                           
Query: 364 RRPILDNVEAAYVRMH 411
              +LD+VEAAYVRMH
Sbjct: 647 *WQVLDHVEAAYVRMH 694



 Score = 48.3 bits (99), Expect(3) = 8e-31
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +1 / +2

                                          
Query: 478 YHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 570
           +HRLRQ  AGAV  LHRLQA GLRGVR+ ++
Sbjct: 761 HHRLRQRQAGAVD*LHRLQAPGLRGVRRKLS 853



 Score = 35.9 bits (72), Expect(3) = 8e-31
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1 / +2

                                 
Query: 43  HGPRRDGFVGYHRRTLPGAQVH 108
           +G  RDG VG+ R +LPGAQ+H
Sbjct: 206 NGAHRDGLVGHLRCSLPGAQIH 271



 Score = 80.8 bits (170), Expect(4) = 4e-26
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = -3 / -2

                                                               
Query: 340 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHL 185
           LT DE +L +LEA HP G +QV++LLQE L  E WQVRQGL+LLD  NRPHL
Sbjct: 623 LTVDEPDLTKLEARHPFGPEQVLDLLQEVLDRERWQVRQGLKLLDAFNRPHL 468



 Score = 42.8 bits (87), Expect(4) = 4e-26
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = -3 / -2

                                       
Query: 568 LCLAGLLATRWPEGDEADALHLPQVVEA 485
           L  AGLLATR   GDEA+ LHLP VVEA
Sbjct: 851 LVSAGLLATRGLVGDEANQLHLPDVVEA 768



 Score = 29.9 bits (59), Expect(4) = 4e-26
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -3 / -2

                       
Query: 418 GVGASEHRQLPH 383
           G+ ASEHRQLPH
Sbjct: 701 GISASEHRQLPH 666



 Score = 27.6 bits (54), Expect(4) = 4e-26
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2 / -1

                              
Query: 101 *APGRVRRW*PTKPSRRGP 45
           *APGR +R  PT+PSR  P
Sbjct: 264 *APGREQRRWPTRPSRWAP 208



 Score = 68.0 bits (142), Expect(3) = 5e-21
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -2 / -1

                                                       
Query: 419 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 288
           W +CIRT*AAST SS    ST+ +C +HGRR++P *TRG+AP W
Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRRTRPY*TRGKAPIW 571



 Score = 41.8 bits (85), Expect(3) = 5e-21
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -2 / -1

                                     
Query: 557 RTPRNPVA*RR*S*RTAPAAGCRSR* 480
           RTPRNP A RR*S* TAPA  CRSR*
Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR* 763



 Score = 29.0 bits (57), Expect(3) = 5e-21
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -2 / -1

                              
Query: 239 VASKTGSRTS*YPQSATPA 183
           VA  TGS+TS*  QSATPA
Sbjct: 522 VAGTTGSQTS*CLQSATPA 466



 Score = 40.9 bits (83), Expect(3) = 2e-10
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = +3 / +1

                             
Query: 186 RCGRLRVSRSSRPCLTCH 239
           RCGRL+ SRS RPC TCH
Sbjct: 469 RCGRLKASRSLRPCRTCH 522



 Score = 37.7 bits (76), Expect(3) = 2e-10
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +3 / +1

                                   
Query: 501 GRCSASASSPSGHRVARSPARHKL 572
           GRCS  ASSP+  RVARSPA  KL
Sbjct: 784 GRCS*LASSPTSPRVARSPAETKL 855



 Score = 29.5 bits (58), Expect(3) = 2e-10
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +3 / +1

                       
Query: 384 CGSCLCSDAPTP 419
           CGSCLCSDA  P
Sbjct: 667 CGSCLCSDALMP 702

>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast|
           precursor, putative, expressed
          Length = 1248

 Score =  277 bits (600), Expect(3) = 6e-94
 Identities = 105/124 (84%), Positives = 117/124 (94%)
 Frame = +2 / +2

                                                                       
Query: 188 VWPIEGIKKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYD 367
           VWPIEGIKKFETLSYLPPLT E LLKQ++YL+RSKWVPCLEFSKVGFV+RE++ SPGYYD
Sbjct: 515 VWPIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHRSPGYYD 694

                                                                       
Query: 368 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQVQCVSFIAFRPPGC 547
           GRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQVQ +SFIA++PPGC
Sbjct: 695 GRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPGC 874

               
Query: 548 EESG 559
           EESG
Sbjct: 875 EESG 886



 Score = 68.0 bits (142), Expect(3) = 6e-94
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +2 / +1

                                             
Query: 44  MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145
           MAP+VMASSATTVAPFQGLKSTAG+PV+RRS  S
Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNS 366



 Score = 39.1 bits (79), Expect(3) = 6e-94
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +2 / +1

                                
Query: 128 RRSSASLGRVSNGGRIRCMQV 190
           R  ++S G VSNGGRIRCMQV
Sbjct: 352 RSGNSSFGNVSNGGRIRCMQV 414



 Score =  203 bits (438), Expect(3) = 6e-66
 Identities = 91/134 (67%), Positives = 102/134 (76%)
 Frame = -1 / -1

                                                                       
Query: 588 LFLSLVVYALPDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASV 409
           L++++     PDSSQPGGL AMKL  CTC  LSKPMIRT ASGY          T VASV
Sbjct: 915 LYMTMTA*LPPDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASV 736

                                                                       
Query: 408 HPNIGSFHIVQYRPS*YPGELLCSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRGGK* 229
           HPN+GSFH+VQY PS*YPG+L  SR T PTLLNSRQGTHLER R S CFRR+S V GG+*
Sbjct: 735 HPNMGSFHMVQYLPS*YPGDLWFSR*TNPTLLNSRQGTHLERSRYSICFRRSSTVSGGR* 556

                         
Query: 228 DRVSNFLIPSIGHT 187
           +RVSNFL+PSIGHT
Sbjct: 555 ERVSNFLMPSIGHT 514



 Score = 57.9 bits (120), Expect(3) = 6e-66
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -1 / -2

                                      
Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43
           TG PAVDLSPWKGATVVAD+AIT GA+
Sbjct: 344 TGMPAVDLSPWKGATVVADDAITEGAI 264



 Score = 29.5 bits (58), Expect(3) = 6e-66
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = -2 / -3

                        
Query: 188 PACT*SFRHC*PC 150
           PACT*S RHC* C
Sbjct: 412 PACT*SCRHC*RC 374



 Score =  128 bits (274), Expect(4) = 7e-51
 Identities = 54/78 (69%), Positives = 65/78 (83%)
 Frame = +1 / +1

                                                                       
Query: 178 VHAGVAD*GYQEVRDPVLLATPHHGGPPEAG*LPDPLQVGALPRVQQGWLRLP*AQQLPR 357
           V+ GVAD*G+QEVRDP+L AT H GGPPEA  +P P QVGALPRVQQG +RLP*  Q+PR
Sbjct: 505 VYLGVAD*GHQEVRDPLLPATAHRGGPPEADRVPAPFQVGALPRVQQGRIRLP*EPQIPR 684

                             
Query: 358 VLRRPILDNVEAAYVRMH 411
           +LR  +LD+VEAA+VR+H
Sbjct: 685 ILRWQVLDHVEAAHVRVH 738



 Score = 57.0 bits (118), Expect(4) = 7e-51
 Identities = 23/29 (79%), Positives = 24/29 (82%)
 Frame = +1 / +1

                                        
Query: 469 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 555
           +RPYHRLRQ  AGA  QLHRLQA GLRGV
Sbjct: 796 IRPYHRLRQRQAGAAHQLHRLQAPGLRGV 882



 Score = 46.9 bits (96), Expect(4) = 7e-51
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +1 / +3

                                
Query: 46  GPRRDGFVGYHRRTLPGAQVH 108
           GP RDG VG+HRR+LPGAQVH
Sbjct: 267 GPLRDGVVGHHRRSLPGAQVH 329



 Score = 25.8 bits (50), Expect(4) = 7e-51
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1 / +3

                    
Query: 163 WRKDQVHAG 189
           WR+DQVHAG
Sbjct: 387 WRQDQVHAG 413



 Score = 95.5 bits (202), Expect(3) = 1e-33
 Identities = 39/53 (73%), Positives = 46/53 (86%)
 Frame = -3 / -3

                                                                
Query: 340 LTEDEANLAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGLELLDTLNRPHLH 182
           LT DE++LAELEAGHPLG +QV++LLQE L GE WQV +GLELLD LNRPHL+
Sbjct: 667 LTVDESDLAELEAGHPLGTEQVLDLLQEVLHGERWQVGEGLELLDALNRPHLN 509



 Score = 49.2 bits (101), Expect(3) = 1e-33
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = -2 / -2

                                             
Query: 557 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQGT 456
           +TPR+P A RR*S*  APA  CRSR*YGR  QGT
Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783



 Score = 43.2 bits (88), Expect(3) = 1e-33
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = -2 / -3

                               
Query: 104 T*APGRVRRW*PTKPSRRGP 45
           T*APGR RRW PT PSRRGP
Sbjct: 325 T*APGRERRWWPTTPSRRGP 266



 Score = 77.1 bits (162), Expect(3) = 2e-23
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = -2 / -2

                                                       
Query: 419 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 288
           WR+C RT AAST SS   RS RG C +HGRR +PC*TRGRAPTW
Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRRIRPC*TRGRAPTW 615



 Score = 37.7 bits (76), Expect(3) = 2e-23
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = -3 / -3

                                  
Query: 553 LLATRWPEGDEADALHLPQVVEA 485
           LLA R   GDEAD LHLP VVEA
Sbjct: 880 LLAARGLVGDEADELHLPDVVEA 812



 Score = 32.2 bits (64), Expect(3) = 2e-23
 Identities = 14/18 (77%), Positives = 15/18 (83%)
 Frame = -2 / -2

                             
Query: 239 VASKTGSRTS*YPQSATP 186
           VA + GSRTS* PQSATP
Sbjct: 566 VAGRRGSRTS*CPQSATP 513



 Score = 40.0 bits (81), Expect(3) = 1e-07
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +3 / +3

                             
Query: 186 RCGRLRVSRSSRPCLTCH 239
           RCGRLR SRSSRP  TCH
Sbjct: 513 RCGRLRASRSSRPSPTCH 566



 Score = 32.7 bits (65), Expect(3) = 1e-07
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3 / +3

                             
Query: 501 GRCSASASSPSGHRVARS 554
           GRCS+SASSP+  R ARS
Sbjct: 828 GRCSSSASSPTSPRAARS 881



 Score = 25.8 bits (50), Expect(3) = 1e-07
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3 / +3

                       
Query: 384 CGSCLCSDAPTP 419
           CGSC CS A TP
Sbjct: 711 CGSCPCSGALTP 746

>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast|
           precursor, putative, expressed
          Length = 1519

 Score =  132 bits (283), Expect(3) = 4e-41
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = +2 / +3

                                                                       
Query: 323 GFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLR 502
           G + R ++  PGYYDGRYWT+WKLPMFGC+DA  VL EVEE ++EYPDA++R+I FD+ R
Sbjct: 750 GEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSR 929

                             
Query: 503 QVQCVSFIAFRPPGCEES 556
           Q QC+SF+  +PP    S
Sbjct: 930 QCQCMSFVVHKPPSAAAS 983



 Score = 57.9 bits (120), Expect(3) = 4e-41
 Identities = 17/38 (44%), Positives = 31/38 (81%)
 Frame = +2 / +2

                                                 
Query: 209 KKFETLSYLPPLTTEALLKQVDYLIRSKWVPCLEFSKV 322
           +++E +SYLPPL+ +++ K++++++   WVPCLEF KV
Sbjct: 491 RRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKV 604



 Score = 23.1 bits (44), Expect(3) = 4e-41
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2 / +1

                            
Query: 140 ASLGRVSNGGRIRCMQV 190
           A  G  SNG R  CMQV
Sbjct: 262 ARRGAASNGFRTYCMQV 312



 Score = 70.3 bits (147), Expect(2) = 4e-14
 Identities = 38/79 (48%), Positives = 42/79 (53%)
 Frame = -1 / -1

                                                                       
Query: 555 DSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 376
           +++  GGL   K  H   R LSK M R  ASGY          T  AS HPNIGSFH VQ
Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803

                              
Query: 375 YRPS*YPGELLCSRKTKPT 319
           Y PS*YPG  L  R   P+
Sbjct: 802 YLPS*YPGIRLLLRWISPS 746



 Score = 31.8 bits (63), Expect(2) = 4e-14
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1 / -2

                                                  
Query: 321 TLLNSRQGTHLERIR*STCFRRASVVRGGK*DRVSNFLI 205
           TL NSRQGTH   +  S        +RGG+*D  S  L+
Sbjct: 603 TLSNSRQGTHPLDMMNSISLEMDFALRGGR*DIASYLLL 487



 Score = 35.9 bits (72), Expect(2) = 0.001
 Identities = 18/33 (54%), Positives = 19/33 (57%)
 Frame = -2 / -2

                                            
Query: 416 RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQP 318
           R+ IRT AAST SS  RRST  S C  G    P
Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSGGSPPP 745



 Score = 30.4 bits (60), Expect(2) = 0.001
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -3 / -1

                                             
Query: 319 LAELEAGHPLGADQVVNLLQEGLRGEGWQVRQGL 218
           L +LEA  P      ++LL +GLR +G QVR  L
Sbjct: 601 LVKLEARDPSFGHDELDLLGDGLRAQGRQVRHRL 500

>LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 8938

 Score = 29.9 bits (59), Expect(3) = 0.97
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3 / +2

                              
Query: 498  CGRCSASASSPSGHRVAR 551
            C RC AS SSP+G  V+R
Sbjct: 1934 CHRCGASTSSPTGRLVSR 1987



 Score = 24.9 bits (48), Expect(3) = 0.97
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3 / +1

                      
Query: 183  CRCGRLRVSR 212
            CRCGRLR+ R
Sbjct: 1582 CRCGRLRLHR 1611



 Score = 24.0 bits (46), Expect(3) = 0.97
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1 / +2

                                          
Query: 838  FNFYPRKNPPMVEFMIYDVSRCMTLQDFCN 927
            F+  P  +PP   F++ D   C  +  FC+
Sbjct: 5966 FHRRPPSSPPTGVFIVIDGRLCSHIGHFCH 6055

>LOC_Os12g36040:12012.t03291:unspliced-genomic alpha-expansin 9 precursor, putative, expressed|
          Length = 2433

 Score = 34.5 bits (69), Expect = 1.2
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +3 / +3

                                           
Query: 528  PSGHRVARSPARHKLREIEKGKDEEVLERFF 620
            P GH +AR P R  LR+   G++E + +RFF
Sbjct: 2070 PQGHLLARRPPRLDLRQHLPGQEELLADRFF 2162

>LOC_Os02g07720:12002.t00668:unspliced-genomic choline-phosphate cytidylyltransferase B, putative, expressed|
          Length = 4004

 Score = 34.5 bits (69), Expect = 1.2
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3 / -2

                                              
Query: 498 CGRCSASASSPSGHRVARSPARHKLREIEKGKDEE 602
           CG  SA+A S    R  R   R + RE EKG+ EE
Sbjct: 151 CGAASAAAWSAMARRFGREREREREREREKGEGEE 47

>LOC_Os06g23390:12006.t02151:unspliced-genomic SF16-like protein, putative|
          Length = 2320

 Score = 34.5 bits (69), Expect = 1.2
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +1 / +1

                                            
Query: 277  PDPLQVGALPRVQQGWLRLP*AQQLPRVLRRP 372
            P+P+Q+G   R   G LRL   QQL R  RRP
Sbjct: 922  PEPVQLGGARRCLDGHLRLEHEQQLQRRSRRP 1017

>LOC_Os01g10490:12001.t00923:unspliced-genomic meiosis 5, putative, expressed|
          Length = 1374

 Score = 33.6 bits (67), Expect(2) = 1.2
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +1 / +2

                                  
Query: 238 TPHHGGPPEAG*LPDPLQVGALP 306
           TP HGG P  G LP P   GA P
Sbjct: 350 TPSHGGGPSGGALPSPSHGGAAP 418



 Score = 21.7 bits (41), Expect(2) = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1 / +1

                               
Query: 475 PYHRLRQPAAGAVRQLHRLQ 534
           P+ RLR+   GAV +  RL+
Sbjct: 463 PWRRLRRRLPGAVPRWRRLR 522

>LOC_Os03g62860:12003.t05513:unspliced-genomic glucan endo-1,3-beta-glucosidase A6 precursor, putative, expressed|
          Length = 2477

 Score = 29.9 bits (59), Expect(2) = 1.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2 / +3

                                                    
Query: 122  VSRRSSASLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 241
            V RR +A+ G    G R+R +Q  P +G +    L  +PP
Sbjct: 915  VRRRHAAAAGDAHAGVRVRAVQRGPQDGARHGAALGPVPP 1034



 Score = 25.8 bits (50), Expect(2) = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2 / +2

                                              
Query: 5   CSRHPPLYS*YSTMAPAVMASSATTVAPFQGLKST 109
           CSR PP  S  ++  P+ + SS ++ AP     ST
Sbjct: 506 CSRRPPGCSAPTSPTPSCVRSSPSSSAPTPTSSST 610

>LOC_Os07g11500:12007.t01023:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2526

 Score = 34.1 bits (68), Expect = 1.6
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3 / +3

                              
Query: 498  CGRCSASASSPSGHRVAR 551
            C RC AS SSP+GHR+ R
Sbjct: 2244 CRRCWASTSSPTGHRIRR 2297

>LOC_Os06g07110:12006.t00595:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4674

 Score = 34.1 bits (68), Expect = 1.6
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3 / +2

                              
Query: 498  CGRCSASASSPSGHRVAR 551
            C RC AS SSP+GHR+ R
Sbjct: 4583 CRRCWASTSSPTGHRIRR 4636

>LOC_Os05g26550:12005.t02309:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1215

 Score = 34.1 bits (68), Expect = 1.6
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3 / +3

                             
Query: 498 CGRCSASASSPSGHRVAR 551
           C RC AS SSP+GHR+ R
Sbjct: 180 CRRCWASTSSPTGHRIRR 233

>LOC_Os08g14280:12008.t01303:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1488

 Score = 33.6 bits (67), Expect = 2.2
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3 / +3

                              
Query: 498  CGRCSASASSPSGHRVAR 551
            C RC AS SSP+GHR+ R
Sbjct: 1080 CCRCWASTSSPTGHRIRR 1133

>LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like protein pDIR7, putative, expressed|
          Length = 727

 Score = 27.2 bits (53), Expect(2) = 2.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3 / -2

                              
Query: 507 CSASASSPSGHRVARSPAR 563
           C +   SPSG R   SPAR
Sbjct: 372 CPSGGRSPSGRRTCTSPAR 316



 Score = 26.3 bits (51), Expect(2) = 2.2
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3 / -2

                         
Query: 183 CRCGRLRVSRSSRP 224
           CRCGR R +RSS P
Sbjct: 408 CRCGRRR*TRSSCP 367

>LOC_Os09g28340:12009.t02512:unspliced-genomic expressed protein|
          Length = 1606

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2 / +1

                                    
Query: 389  STLSSIGRRSTRGSCCAHGRRSQP 318
            S L+S+G RS+RG  C + RRS P
Sbjct: 1204 SGLTSVGERSSRGQPCRYRRRSPP 1275

>LOC_Os08g17540:12008.t01624:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 643

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +3 / -2

                                     
Query: 498 CGRCSASASSPSGHRVARSPARHKLR 575
           C RC AS SSP+GH  A +   H L+
Sbjct: 123 CRRCWASTSSPTGHVAATANRHHHLQ 46

>LOC_Os05g19030:12005.t01670:unspliced-genomic expressed protein|
          Length = 3058

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -2 / +2

                                                
Query: 401 T*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPT 291
           T A +TLS   RR++R S C   RRS    T  R PT
Sbjct: 518 TSAPATLSRARRRTSRTSTCTRRRRSSTWATGARCPT 628

>LOC_Os02g07690:12002.t00666:unspliced-genomic VQ motif family protein, expressed|
          Length = 1146

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -2 / +2

                                    
Query: 368 RRSTRGSCCAHGRRSQPC*TRGRAP 294
           RR  RG CC   RR + C  RGR P
Sbjct: 596 RRRRRGCCCRASRRRRCCRRRGRRP 670

>LOC_Os04g36910:12004.t03311:unspliced-genomic expressed protein|
          Length = 5251

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1 / +1

                                                          
Query: 604  FLRGSSSRNPKEDEKNHPKYVVPRVTEVRACEWPSDEFLRAVGLHE 741
            +LR S S +  E+  N+P Y+ P +TE+    + ++ F  +  L +
Sbjct: 1501 YLRFSMSTHGNENCSNNPAYICPEITELHLPSYKNNPFCTSTKLQD 1638

>LOC_Os09g36840:12009.t03160:unspliced-genomic hypothetical protein|
          Length = 600

 Score = 29.0 bits (57), Expect(2) = 3.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +3 / -2

                                                 
Query: 501 GRCSASASSPSGHRVARSPARHKLREIEKGKDEEVLER 614
           GR  +      G R    PARH L E+E+G +  +  R
Sbjct: 122 GRKGSGGGGG*GGRGRGEPARHPLSEVEEGSNRGIFVR 9



 Score = 23.5 bits (45), Expect(2) = 3.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1 / -1

                            
Query: 241 PHHGGPPEAG*LPDPLQ 291
           P HG PP A   P P Q
Sbjct: 480 PSHGSPPRAPSHPPPSQ 430

>LOC_Os05g37700:12005.t03312:unspliced-genomic periplasmic beta-glucosidase precursor, putative, expressed|
          Length = 4490

 Score = 24.9 bits (48), Expect(2) = 3.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2 / -1

                          
Query: 371 GRRSTRGSCCAHGRR 327
           GRR  R  CC  GRR
Sbjct: 470 GRRWRRRRCCGRGRR 426



 Score = 24.9 bits (48), Expect(2) = 3.9
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = -1 / -1

                                              
Query: 342 CSRKTKPTLLNSRQGTHLERIR*STCFRRASVVRG 238
           C R   P+    R G    R R*  C RRA   RG
Sbjct: 371 CRRPCGPSRRRRRGGAGRSRRR*GRCRRRARRWRG 267

>LOC_Os07g42490:12007.t03900:unspliced-genomic sucrose synthase 3, putative, expressed|
          Length = 5539

 Score = 32.7 bits (65), Expect = 4.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3 / +2

                                     
Query: 961  FFYPQHKVICIHCKNLVVSCTGKHR 887
            FFY +H +  IHC  LV SC   +R
Sbjct: 3620 FFYDKHSISIIHCSILVPSCAVYNR 3694

>LOC_Os01g07720:12001.t00652:unspliced-genomic dolichyl-P-Man Man-PP-dolichyl mannosyltransferase, putative,|
           expressed
          Length = 3703

 Score = 32.7 bits (65), Expect = 4.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2 / +3

                                             
Query: 419 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQP 318
           WR    T +     ++GR ++R SCC+  RRS P
Sbjct: 66  WRGWASTASRRRRPTVGRSTSRRSCCSPTRRSSP 167

>LOC_Os07g32880:12007.t02969:unspliced-genomic ATP synthase gamma chain, chloroplast precursor, putative,|
           expressed
          Length = 1613

 Score = 31.8 bits (63), Expect(2) = 4.6
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -2 / +3

                              
Query: 92  GRVRRW*PTKPSRRGPWYC 36
           GR RRW P  PSRR  W C
Sbjct: 396 GRRRRWCPPAPSRRRWWRC 452



 Score = 21.7 bits (41), Expect(2) = 4.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2 / +3

                               
Query: 413 RCIRT*AASTLSSIGRRSTR 354
           RC+   AAST  +  RRS R
Sbjct: 303 RCVSCGAASTRCATRRRSRR 362

>LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3502

 Score = 30.4 bits (60), Expect(2) = 5.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +3 / -2

                             
Query: 498 CGRCSASASSPSGHRVAR 551
           C RC ASASSP+G  V+R
Sbjct: 375 CRRCWASASSPTGRLVSR 322



 Score = 24.0 bits (46), Expect(2) = 5.0
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1 / -1

                                             
Query: 223  PVLLATPHHGGPPEAG*LPDPLQVGALPRVQQG 321
            P+ L+TP       A   P P   GA P   QG
Sbjct: 2854 PLTLSTPSTSSRSAASTPPSPSTTGAWPGYVQG 2756

>LOC_Os01g08460:12001.t00724:unspliced-genomic TMS membrane protein/tumour differentially expressed protein|
            containing protein, expressed
          Length = 6203

 Score = 25.8 bits (50), Expect(2) = 5.1
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -1 / +3

                                                             
Query: 861  ILPRIKVEALNENIGEEEVL*APIFNECSKTCILHQVIKVFMKPNGAQK 715
            I PR+ +    +N     V+    F+ECS        + +F +PN A K
Sbjct: 1299 IHPRLLLVIRIQNEKHANVVSFSFFSECSPWSYADLFLSIFNRPNPALK 1445



 Score = 23.5 bits (45), Expect(2) = 5.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3 / +3

                          
Query: 967  FFFFYPQHKVICIH 926
            F F  P H +IC H
Sbjct: 1230 FAFHIPHHLIICFH 1271

>LOC_Os06g40870:12006.t03782:unspliced-genomic expressed protein|
          Length = 2000

 Score = 32.2 bits (64), Expect = 5.7
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1 / -3

                                        
Query: 772 LTAFVEDRCSQYLLLTNIFVQSFNFYPRK 858
           LT F  D CS +  L N  +  F+F+P K
Sbjct: 339 LTEFWPDNCSNFFSLVN*VIYPFSFFPEK 253

>LOC_Os02g35450:12002.t03183:unspliced-genomic DNA-repair protein XRCC3, putative|
          Length = 873

 Score = 26.3 bits (51), Expect(2) = 6.5
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2 / +2

                                                         
Query: 8   SRHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145
           S  PP  +   + AP+  ASS     P    +S A  P  R SSAS
Sbjct: 101 SSPPPAPASSPSAAPSSTASSPAASRPPPSPRSPASPPPGRPSSAS 238



 Score = 25.8 bits (50), Expect(2) = 6.5
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3 / +2

                              
Query: 501 GRCSASASSPSGHRVARSP 557
           GR S+++SSPS  R  RSP
Sbjct: 218 GRPSSASSSPSSPRSPRSP 274

>LOC_Os07g49080:12007.t04536:unspliced-genomic COBRA-like protein 7 precursor, putative, expressed|
          Length = 2373

 Score = 28.6 bits (56), Expect(2) = 6.5
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -2 / +2

                                   
Query: 77   W*PTKPSRRGPWYCINCREEDAG 9
            W    PSRR  W C  CR    G
Sbjct: 1181 WTRRSPSRRSRWRCTRCRLTSTG 1249



 Score = 24.9 bits (48), Expect(2) = 6.5
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2 / +2

                                                      
Query: 416 RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 288
           RR  RT A +T +  GRR T  +  A       C  R R  TW
Sbjct: 752 RRPRRTRAPATWTRAGRRRTSRAARATW*SPTTCSRRTRPRTW 880

>LOC_Os11g39260:12011.t03468:unspliced-genomic NBS-LRR disease resistance protein, putative|
          Length = 3124

 Score = 25.8 bits (50), Expect(2) = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1 / +1

                                  
Query: 616  SSSRNPKEDEKNHPKYVVPRVT 681
            SS RNP    K HP  V+  +T
Sbjct: 2725 SSHRNPLRQSKRHPGIVLAGIT 2790



 Score = 23.1 bits (44), Expect(2) = 7.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3 / +3

                             
Query: 519  ASSPSGHRVARSPARHK 569
            A+SP   R   SPARHK
Sbjct: 2661 ANSPGSCRSNFSPARHK 2711

>LOC_Os11g39254:12011.t004403:unspliced-genomic expressed protein|
          Length = 1154

 Score = 25.8 bits (50), Expect(2) = 7.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1 / -2

                                 
Query: 616 SSSRNPKEDEKNHPKYVVPRVT 681
           SS RNP    K HP  V+  +T
Sbjct: 796 SSHRNPLRQSKRHPGIVLAGIT 731



 Score = 23.1 bits (44), Expect(2) = 7.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3 / -1

                            
Query: 519 ASSPSGHRVARSPARHK 569
           A+SP   R   SPARHK
Sbjct: 860 ANSPGSCRSNFSPARHK 810

>LOC_Os08g41440:12008.t03873:unspliced-genomic NAD-dependent epimerase/dehydratase family protein, putative,|
            expressed
          Length = 2014

 Score = 31.8 bits (63), Expect = 7.9
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2 / +1

                                                       
Query: 416  RRCIRT*AASTLSSIGRRSTRGSCCAHGRRSQPC*TRGRAPTW 288
            RRC R        S  R +T  +  +    S PC  RG APTW
Sbjct: 883  RRCTRRPRRPARPSPTRTTTSTASPSPASASSPCTGRGAAPTW 1011

>LOC_Os08g22210:12008.t02002:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1543

 Score = 31.8 bits (63), Expect = 7.9
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3 / +2

                             
Query: 498 CGRCSASASSPSGHRVAR 551
           C RC AS SSP+GH V R
Sbjct: 182 CRRCWASTSSPTGHLVCR 235

>LOC_Os12g09310:12012.t00810:unspliced-genomic conserved hypothetical protein|
          Length = 480

 Score = 25.4 bits (49), Expect(2) = 8.2
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2 / +1

                              
Query: 371 GRRSTRGSCCAHGRRSQPC 315
           GR      CC   RR QPC
Sbjct: 331 GRTGPPVPCCVQRRRRQPC 387



 Score = 23.5 bits (45), Expect(2) = 8.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2 / +2

                                   
Query: 419 WRRCIRT*AASTLSSIGRRSTRGS 348
           W R  R  AA  L  +GRR  R S
Sbjct: 173 WHRGGRRPAAGVLEEVGRRRKRRS 244

>LOC_Os02g27910:12002.t02485:unspliced-genomic conserved hypothetical protein|
          Length = 600

 Score = 27.6 bits (54), Expect(2) = 8.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3 / -2

                                              
Query: 501 GRCSASASSPSGHRVARSPARHKLREIEKGKDEEV 605
           GR  +      G R    PARH L E+E+G +  +
Sbjct: 122 GRKGSGGGGG*GGRGRGEPARHPLSEVEEGSNRGI 18



 Score = 23.5 bits (45), Expect(2) = 8.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1 / -1

                            
Query: 241 PHHGGPPEAG*LPDPLQ 291
           P HG PP A   P P Q
Sbjct: 480 PSHGSPPRAPSHPPPSQ 430

>LOC_Os02g49440:12002.t04528:unspliced-genomic expressed protein|
          Length = 1343

 Score = 27.6 bits (54), Expect(2) = 9.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2 / +1

                                               
Query: 62  ASSATTVAPFQGLKSTAGLPVSRRSSASLGRVSNGG 169
           +SSA + AP     +T      RR+SAS  R S+GG
Sbjct: 508 SSSAASSAPSTPTAATDNAKNQRRASASSPRSSSGG 615



 Score = 24.4 bits (47), Expect(2) = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3 / +3

                                       
Query: 531 SGHRVARSPARHKLREIEKGKDEEVLER 614
           +GH V     RHK R+ +   DE + +R
Sbjct: 663 TGHAVVEHHRRHKPRDDDDDDDEPLPDR 746


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 361,541,552
Number of extensions: 5479447
Number of successful extensions: 24004
Number of sequences better than 10.0: 38
Length of query: 323
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 273
Effective length of database: 52,799,986
Effective search space: 14414396178
Effective search space used: 14414396178
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)