ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf29e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os08g0404200:Os08g0404200 | 263 | 1e-70 | 2 | AK063072:Os08g0404300 | 263 | 1e-70 | 3 | Os04g0321500:Os04g0321500 | 261 | 3e-70 | 4 | AK120797:Os01g0924000 | 95 | 5e-20 | 5 | AK061690:Os01g0924000 | 95 | 5e-20 | 6 | AF050674:Os01g0924000 | 95 | 5e-20 | 7 | AK108110: | 30 | 1.9 | 8 | Os09g0522100:Os09g0522100 | 29 | 4.3 | 9 | Os02g0211000:Os02g0211000 | 29 | 4.3 | 10 | AK104864:Os01g0805200 | 29 | 4.3 | 11 | AK066239:Os01g0805200 | 29 | 4.3 | 12 | AK120554:Os03g0146400 | 28 | 5.6 | 13 | AK111974:Os03g0146400 | 28 | 5.6 |
|---|
>Os08g0404200:Os08g0404200 | Length = 145 Score = 263 bits (671), Expect = 1e-70 Identities = 123/145 (84%), Positives = 134/145 (92%) Frame = +1 Query: 109 MAFSSVFRRVNIKELISNVPVYTSSTETSGGMSLVLRRWATKKTAGSTKNGRDSNPKYLG 288 MAFSSVFRR N+KELISNV VYTS+ E+SGG+SL+ +RWATKKTAGSTKNGRDSNPKYLG Sbjct: 1 MAFSSVFRRGNVKELISNVSVYTSAAESSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLG 60 Query: 289 VKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHTIFSLKEGHVRFERNKLTGRKWIHV 468 VKKFGGEKVEPGNII+RQRGTRFHPGNYVGMGKDHT+F LKEGHVRFERNKLTGRKW+HV Sbjct: 61 VKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHV 120 Query: 469 EPVAGHTLHPVYADGSATAADMELL 543 +PVAGH LHPVYA S AA+ME L Sbjct: 121 DPVAGHVLHPVYASDSTPAAEMEPL 145
>AK063072:Os08g0404300 | Length = 145 Score = 263 bits (671), Expect = 1e-70 Identities = 123/145 (84%), Positives = 134/145 (92%) Frame = +1 Query: 109 MAFSSVFRRVNIKELISNVPVYTSSTETSGGMSLVLRRWATKKTAGSTKNGRDSNPKYLG 288 MAFSSVFRR N+KELISNV VYTS+ E+SGG+SL+ +RWATKKTAGSTKNGRDSNPKYLG Sbjct: 1 MAFSSVFRRGNVKELISNVSVYTSAAESSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLG 60 Query: 289 VKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHTIFSLKEGHVRFERNKLTGRKWIHV 468 VKKFGGEKVEPGNII+RQRGTRFHPGNYVGMGKDHT+F LKEGHVRFERNKLTGRKW+HV Sbjct: 61 VKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHV 120 Query: 469 EPVAGHTLHPVYADGSATAADMELL 543 +PVAGH LHPVYA S AA+ME L Sbjct: 121 DPVAGHVLHPVYASDSTPAAEMEPL 145
>Os04g0321500:Os04g0321500 | Length = 145 Score = 261 bits (668), Expect = 3e-70 Identities = 123/145 (84%), Positives = 133/145 (91%) Frame = +1 Query: 109 MAFSSVFRRVNIKELISNVPVYTSSTETSGGMSLVLRRWATKKTAGSTKNGRDSNPKYLG 288 MAFSSVFRR N+KELISNV VYTS+ E+SGG+SL+ +RWATKKTAGSTKNGRDSNPKYLG Sbjct: 1 MAFSSVFRRGNVKELISNVSVYTSTVESSGGLSLIFKRWATKKTAGSTKNGRDSNPKYLG 60 Query: 289 VKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHTIFSLKEGHVRFERNKLTGRKWIHV 468 VKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHT+F LKEGHVRFERNKLTGRKW+HV Sbjct: 61 VKKFGGEKVEPGNIIVRQRGTRFHPGNYVGMGKDHTLFCLKEGHVRFERNKLTGRKWVHV 120 Query: 469 EPVAGHTLHPVYADGSATAADMELL 543 +PVAGH LHPVY S AA+ME L Sbjct: 121 DPVAGHVLHPVYTSDSTPAAEMEPL 145
>AK120797:Os01g0924000 | Length = 195 Score = 95.1 bits (235), Expect = 5e-20 Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Frame = +1 Query: 202 MSLVLRR----WATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIVRQRGTRFHPGN 369 M++ +RR A KK AGSTKNGRDS + LGVK +G + +PG II+RQRGTR +PGN Sbjct: 49 MTMPVRRLTIQMAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGN 108 Query: 370 YVGMGKDHTIFSLKEGHVRFER 435 VGMGKDHT+FSL +G V+FE+ Sbjct: 109 NVGMGKDHTLFSLIDGLVKFEK 130
>AK061690:Os01g0924000 | Length = 195 Score = 95.1 bits (235), Expect = 5e-20 Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Frame = +1 Query: 202 MSLVLRR----WATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIVRQRGTRFHPGN 369 M++ +RR A KK AGSTKNGRDS + LGVK +G + +PG II+RQRGTR +PGN Sbjct: 49 MTMPVRRLTIQMAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGN 108 Query: 370 YVGMGKDHTIFSLKEGHVRFER 435 VGMGKDHT+FSL +G V+FE+ Sbjct: 109 NVGMGKDHTLFSLIDGLVKFEK 130
>AF050674:Os01g0924000 | Length = 195 Score = 95.1 bits (235), Expect = 5e-20 Identities = 49/82 (59%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Frame = +1 Query: 202 MSLVLRR----WATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIVRQRGTRFHPGN 369 M++ +RR A KK AGSTKNGRDS + LGVK +G + +PG II+RQRGTR +PGN Sbjct: 49 MTMPVRRLTIQMAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIIRQRGTRVYPGN 108 Query: 370 YVGMGKDHTIFSLKEGHVRFER 435 VGMGKDHT+FSL +G V+FE+ Sbjct: 109 NVGMGKDHTLFSLIDGLVKFEK 130
>AK108110: | Length = 314 Score = 30.0 bits (66), Expect = 1.9 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 1/119 (0%) Frame = +1 Query: 157 SNVPVYTSSTETSGGMSLVLRRWATKKTAGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIV 336 +N V STE GG +RW+ +G G G + + N+ Sbjct: 41 TNGSVCNGSTEGRGG-----KRWSGDGGSGGDGRGVSGCRGNSRSSDGGADDLRGSNV-- 93 Query: 337 RQRGTRFHPGNYVGMGKDHTIFSLKEGHVRFER-NKLTGRKWIHVEPVAGHTLHPVYAD 510 R GN +G G H + G+ ++R L G V PV GH + PVY D Sbjct: 94 -NDALRHWDGNRLGNGDSHRL-----GNRHWDRLGNLDG-----VRPVDGHRVGPVYGD 141
>Os09g0522100:Os09g0522100 | Length = 246 Score = 28.9 bits (63), Expect = 4.3 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Frame = +1 Query: 178 SSTETSGGMSLVLRRWATKKTAGSTKNGRDSNPKYLGVKKFGG------EKVEPGNIIVR 339 SS+ +SG R+ K+ AG TK +P Y GV++ GG E PG Sbjct: 19 SSSSSSG------RQQYKKRPAGRTKFRETRHPVYRGVRRRGGAGRWVCEVRVPG----- 67 Query: 340 QRGTRFHPGNYV 375 +RG R G YV Sbjct: 68 KRGARLWLGTYV 79
>Os02g0211000:Os02g0211000 | Length = 964 Score = 28.9 bits (63), Expect = 4.3 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Frame = -3 Query: 537 LHVSCSG*TIGVNRVESVPSYRFNMNPFPASQLIPLKPYMAFLQREDSVILPH------- 379 LH+ SG I + V+ +P M P S LI PY+ ++ VIL + Sbjct: 317 LHLRASGLKISFDFVKDMPRAARPMRPIDISSLIGQLPYVWTMELLFPVILTNIVYEKQK 376 Query: 378 -ANIVPRMEAGSSLSYDDVSWFHFLSTKFL 292 I+ +M SY +S+ +F L Sbjct: 377 KLRIMMKMHGLGDFSYWTISYCYFFLLSLL 406
>AK104864:Os01g0805200 | Length = 209 Score = 28.9 bits (63), Expect = 4.3 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +2 Query: 23 AAAHAQVSLIRGTPGGRVKVTTGKLYQARW---PSHQFLGE*TSKN*SQMFRCTLAQQRH 193 AA A ++ I + GRV L AR P Q +GE +QMFR L Q+R Sbjct: 4 AALAAPIASISPSSAGRVTAAAAGLRSARMASSPVAQPIGEAVVLRPNQMFRSVLRQRRR 63 Query: 194 L 196 L Sbjct: 64 L 64
>AK066239:Os01g0805200 | Length = 209 Score = 28.9 bits (63), Expect = 4.3 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +2 Query: 23 AAAHAQVSLIRGTPGGRVKVTTGKLYQARW---PSHQFLGE*TSKN*SQMFRCTLAQQRH 193 AA A ++ I + GRV L AR P Q +GE +QMFR L Q+R Sbjct: 4 AALAAPIASISPSSAGRVTAAAAGLRSARMASSPVAQPIGEAVVLRPNQMFRSVLRQRRR 63 Query: 194 L 196 L Sbjct: 64 L 64
>AK120554:Os03g0146400 | Length = 529 Score = 28.5 bits (62), Expect = 5.6 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -2 Query: 667 PETFLLEQIQLRRYPCRSKTAEPCPGSYQQFVTATHAQINTTVAPC 530 P T L ++ L RY + C G+Y F T + TVA C Sbjct: 437 PSTVLSKREMLDRYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFC 482
>AK111974:Os03g0146400 | Length = 529 Score = 28.5 bits (62), Expect = 5.6 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = -2 Query: 667 PETFLLEQIQLRRYPCRSKTAEPCPGSYQQFVTATHAQINTTVAPC 530 P T L ++ L RY + C G+Y F T + TVA C Sbjct: 437 PSTVLSKREMLDRYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFC 482 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,232,497 Number of extensions: 590563 Number of successful extensions: 1694 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1694 Number of HSP's successfully gapped: 13 Length of query: 265 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 166 Effective length of database: 11,435,796 Effective search space: 1898342136 Effective search space used: 1898342136 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
