ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf29e12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT829890.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA012I18, full insert sequence Length = 765 Score = 416 bits (210), Expect = e-113 Identities = 378/434 (87%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 200 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 259 Query: 165 tccggtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttg 224 | |||| ||||||||| |||||||| ||||||| ||| |||||||| |||| | |||||| Sbjct: 260 ttcggtctacactagcgcaacagagtcatctggaggattgagcttgatttttaagcgttg 319 Query: 225 ggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatct 284 ||| || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| | Sbjct: 320 ggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtattt 379 Query: 285 gggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaag 344 ||||||||| || ||||| |||||||||||||| ||||||||||||||| | || ||||| Sbjct: 380 gggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaag 439 Query: 345 aggaacccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctc 404 ||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| Sbjct: 440 aggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctg 499 Query: 405 tctgaaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattca 464 |||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| |||| Sbjct: 500 tctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttca 559 Query: 465 tgttgaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgc 524 |||||| ||||| |||||||| ||||||||||| |||||| || ||| || |||| Sbjct: 560 tgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattccacccctgc 619 Query: 525 agctgacatggagc 538 |||||| ||||||| Sbjct: 620 agctgaaatggagc 633
>emb|CT833364.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA044J22, full insert sequence Length = 932 Score = 416 bits (210), Expect = e-113 Identities = 378/434 (87%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 210 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 269 Query: 165 tccggtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttg 224 | |||| ||||||||| |||||||| ||||||| ||| |||||||| |||| | |||||| Sbjct: 270 ttcggtctacactagcgcaacagagtcatctggaggattgagcttgatttttaagcgttg 329 Query: 225 ggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatct 284 ||| || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| | Sbjct: 330 ggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtattt 389 Query: 285 gggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaag 344 ||||||||| || ||||| |||||||||||||| ||||||||||||||| | || ||||| Sbjct: 390 gggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaag 449 Query: 345 aggaacccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctc 404 ||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| Sbjct: 450 aggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctg 509 Query: 405 tctgaaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattca 464 |||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| |||| Sbjct: 510 tctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttca 569 Query: 465 tgttgaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgc 524 |||||| ||||| |||||||| ||||||||||| |||||| || ||| || |||| Sbjct: 570 tgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattccacccctgc 629 Query: 525 agctgacatggagc 538 |||||| ||||||| Sbjct: 630 agctgaaatggagc 643
>ref|NM_001068300.1| Oryza sativa (japonica cultivar-group) Os08g0404300 (Os08g0404300) mRNA, complete cds Length = 920 Score = 408 bits (206), Expect = e-110 Identities = 377/434 (86%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 198 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 257 Query: 165 tccggtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttg 224 | |||| ||||||||| || ||||| ||||||| ||| |||||||| |||| | |||||| Sbjct: 258 ttcggtctacactagcgcagcagagtcatctggaggattgagcttgatttttaagcgttg 317 Query: 225 ggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatct 284 ||| || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| | Sbjct: 318 ggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtattt 377 Query: 285 gggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaag 344 ||||||||| || ||||| |||||||||||||| ||||||||||||||| | || ||||| Sbjct: 378 gggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaag 437 Query: 345 aggaacccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctc 404 ||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| Sbjct: 438 aggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctg 497 Query: 405 tctgaaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattca 464 |||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| |||| Sbjct: 498 tctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttca 557 Query: 465 tgttgaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgc 524 |||||| ||||| |||||||| ||||||||||| |||||| || ||| || |||| Sbjct: 558 tgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgc 617 Query: 525 agctgacatggagc 538 |||||| ||||||| Sbjct: 618 agctgaaatggagc 631
>dbj|AK063072.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H03, full insert sequence Length = 920 Score = 408 bits (206), Expect = e-110 Identities = 377/434 (86%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 198 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 257 Query: 165 tccggtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttg 224 | |||| ||||||||| || ||||| ||||||| ||| |||||||| |||| | |||||| Sbjct: 258 ttcggtctacactagcgcagcagagtcatctggaggattgagcttgatttttaagcgttg 317 Query: 225 ggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatct 284 ||| || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| | Sbjct: 318 ggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtattt 377 Query: 285 gggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaag 344 ||||||||| || ||||| |||||||||||||| ||||||||||||||| | || ||||| Sbjct: 378 gggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaag 437 Query: 345 aggaacccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctc 404 ||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| Sbjct: 438 aggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctg 497 Query: 405 tctgaaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattca 464 |||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| |||| Sbjct: 498 tctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttca 557 Query: 465 tgttgaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgc 524 |||||| ||||| |||||||| ||||||||||| |||||| || ||| || |||| Sbjct: 558 tgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgc 617 Query: 525 agctgacatggagc 538 |||||| ||||||| Sbjct: 618 agctgaaatggagc 631
>ref|NM_001068299.1| Oryza sativa (japonica cultivar-group) Os08g0404200 (Os08g0404200) mRNA, complete cds Length = 438 Score = 400 bits (202), Expect = e-108 Identities = 373/430 (86%) Strand = Plus / Plus Query: 109 atggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgttccg 168 ||||| || ||||||||||| ||||||| ||| ||||||||||||||||||||||| || Sbjct: 1 atggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcg 60 Query: 169 gtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttgggct 228 || ||||||||| || ||||| ||||||| ||| |||||||| |||| | ||||||||| Sbjct: 61 gtctacactagcgcagcagagtcatctggaggattgagcttgatttttaagcgttgggcc 120 Query: 229 acaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatctgggt 288 || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 121 accaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggt 180 Query: 289 gttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaagagga 348 ||||| || ||||| |||||||||||||| ||||||||||||||| | || ||||||||| Sbjct: 181 gttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaagagga 240 Query: 349 acccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctctctg 408 ||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| |||| Sbjct: 241 acccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctg 300 Query: 409 aaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattcatgtt 468 || ||||| ||||| || || ||||| || ||||||||||||||||||||| |||||||| Sbjct: 301 aaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgtt 360 Query: 469 gaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgcagct 528 || ||||| |||||||| ||||||||||| |||||| || ||| || |||||||| Sbjct: 361 gatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgcagct 420 Query: 529 gacatggagc 538 || ||||||| Sbjct: 421 gaaatggagc 430
>ref|NM_001058997.1| Oryza sativa (japonica cultivar-group) Os04g0321500 (Os04g0321500) mRNA, complete cds Length = 438 Score = 392 bits (198), Expect = e-106 Identities = 372/430 (86%) Strand = Plus / Plus Query: 109 atggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgttccg 168 ||||| || ||||||||||| ||||||| ||| ||||||||||||||||||||||| || Sbjct: 1 atggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcg 60 Query: 169 gtgtacactagctcaacagagacatctgggggaatgagcttggttttgaggcgttgggct 228 || ||||||||| || |||| ||||||| ||| |||||||| |||| | ||||||||| Sbjct: 61 gtctacactagcacagtagagtcatctggaggattgagcttgatttttaagcgttgggcc 120 Query: 229 acaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagtatctgggt 288 || |||||||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 121 accaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggt 180 Query: 289 gttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgacaaagagga 348 ||||| || ||||| |||||||||||||| ||||||||||||||||| || ||||||||| Sbjct: 181 gttaaaaagtttggcggagagaaagtggagccaggaaacatcatcgtccgccaaagagga 240 Query: 349 acccgcttccatcctgggaactatgttggcatggggaaggatcacactatcttctctctg 408 ||||||||||||||||||||||| ||||||||||||||||| || ||| |||||| |||| Sbjct: 241 acccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctg 300 Query: 409 aaggaaggccatgtacggtttgagcggaataagctgactggcaggaaatggattcatgtt 468 || ||||| ||||| || || ||||| || ||||||||||||||||||||| |||||||| Sbjct: 301 aaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgtt 360 Query: 469 gaacctgtagctgggcacactctccaccctgtttacgccgatggttcagccactgcagct 528 || ||||| |||||||| ||||||||||| ||| || || ||| || |||||||| Sbjct: 361 gatcctgttgctgggcatgtgctccaccctgtctacaccagtgattcgacccctgcagct 420 Query: 529 gacatggagc 538 || ||||||| Sbjct: 421 gaaatggagc 430
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 19298048 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 19298107 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 19298108 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 19298167 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 19298168 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 19298227 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 19298228 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 19298278 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 19303203 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 19303262 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 19303263 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 19303322 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 19303323 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 19303382 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 19303383 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 19303433 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 19297699 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 19297758 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 19297759 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 19297818 Query: 305 gagag 309 ||||| Sbjct: 19297819 gagag 19297823 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 19302854 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 19302913 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 19302914 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 19302973 Query: 305 gagag 309 ||||| Sbjct: 19302974 gagag 19302978 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 19297506 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 19297565 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 19297566 ttcggtctacactagc 19297581 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 19302661 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 19302720 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 19302721 ttcggtctacactagc 19302736
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 14848195 agaaagtggagccaggaaacatcatcgtccgccaaagaggaacccgcttccatcctggga 14848254 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 14848255 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 14848314 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 14848315 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 14848374 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| ||| || || ||| || |||||||||| ||||||| Sbjct: 14848375 tgctccaccctgtctacaccagtgattcgacccctgcagctgaaatggagc 14848425 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 14847847 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 14847906 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 14847907 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 14847966 Query: 305 gagag 309 ||||| Sbjct: 14847967 gagag 14847971 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 369 ctatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggtt 428 ||||||||| ||||| ||||||| ||| |||||| ||| || |||| || || || || Sbjct: 8664735 ctatgttggaatgggaaaggatcgtactctcttctgtctcaaataaggacacgtgcgttt 8664794 Query: 429 tgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcacac 488 |||||| || |||||||||||||| |||||| |||||||||| ||||| || ||||||| Sbjct: 8664795 tgagcgcaacaagctgactggcagaaaatgggttcatgttgatcctgttgccgggcacat 8664854 Query: 489 tctccaccctgtttacgccgatggttcagccactgcagctgacatggagctactgta 545 ||||||||||| |||||| || ||| ||||||| ||||| ||||||| |||||| Sbjct: 8664855 gctccaccctgtctacgccagtgattcgaccactgctgctgaaatggagccactgta 8664911 Score = 91.7 bits (46), Expect = 4e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||| Sbjct: 8664337 agaaagtggagccaggaaatatcatcgtccgccaatgaggaacccgcttccatcctggga 8664396 Query: 368 actatg 373 |||||| Sbjct: 8664397 actatg 8664402 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 14847673 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 14847732 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 14847733 ttcggtctacactagc 14847748
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 4933 agaaagtggagccaggaaacatcatcgtccgccaaagaggaacccgcttccatcctggga 4992 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 4993 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 5052 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 5053 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 5112 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| ||| || || ||| || |||||||||| ||||||| Sbjct: 5113 tgctccaccctgtctacaccagtgattcgacccctgcagctgaaatggagc 5163 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 4585 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 4644 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 4645 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 4704 Query: 305 gagag 309 ||||| Sbjct: 4705 gagag 4709 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 4411 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 4470 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 4471 ttcggtctacactagc 4486
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 27491 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 27550 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 27551 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 27610 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 27611 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 27670 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 27671 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 27721 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 32646 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 32705 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 32706 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 32765 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 32766 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 32825 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 32826 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 32876 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 27142 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 27201 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 27202 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 27261 Query: 305 gagag 309 ||||| Sbjct: 27262 gagag 27266 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 32297 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 32356 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 32357 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 32416 Query: 305 gagag 309 ||||| Sbjct: 32417 gagag 32421 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 26949 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 27008 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 27009 ttcggtctacactagc 27024 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 32104 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 32163 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 32164 ttcggtctacactagc 32179
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 71061 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 71120 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 71121 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 71180 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 71181 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 71240 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 71241 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 71291 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 76216 agaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctggga 76275 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 76276 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 76335 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 76336 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 76395 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| |||||| || ||| || |||||||||| ||||||| Sbjct: 76396 tgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagc 76446 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 70712 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 70771 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 70772 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 70831 Query: 305 gagag 309 ||||| Sbjct: 70832 gagag 70836 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 75867 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 75926 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 75927 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 75986 Query: 305 gagag 309 ||||| Sbjct: 75987 gagag 75991 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 70519 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 70578 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 70579 ttcggtctacactagc 70594 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 75674 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 75733 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 75734 ttcggtctacactagc 75749
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 212 bits (107), Expect = 1e-51 Identities = 200/231 (86%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 102133 agaaagtggagccaggaaacatcatcgtccgccaaagaggaacccgcttccatcctggga 102192 Query: 368 actatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggt 427 |||| ||||||||||||||||| || ||| |||||| |||||| ||||| ||||| || | Sbjct: 102193 actacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgat 102252 Query: 428 ttgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcaca 487 | ||||| || ||||||||||||||||||||| |||||||||| ||||| |||||||| Sbjct: 102253 tcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatg 102312 Query: 488 ctctccaccctgtttacgccgatggttcagccactgcagctgacatggagc 538 ||||||||||| ||| || || ||| || |||||||||| ||||||| Sbjct: 102313 tgctccaccctgtctacaccagtgattcgacccctgcagctgaaatggagc 102363 Score = 121 bits (61), Expect = 4e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 185 cagagacatctgggggaatgagcttggttttgaggcgttgggctacaaaaaagactgctg 244 ||||| ||||||| ||| |||||||| |||| | ||||||||| || |||||||| |||| Sbjct: 101785 cagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctg 101844 Query: 245 ggtcaacaaaaaatggccgcgactctaaccccaagtatctgggtgttaagaaatttggtg 304 | ||||||||||||||||| ||||||||||| |||||| |||||||||| || ||||| | Sbjct: 101845 gatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcg 101904 Query: 305 gagag 309 ||||| Sbjct: 101905 gagag 101909 Score = 87.7 bits (44), Expect = 6e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 105 caagatggccttctcatcagtttttaggagagtaaacatcaaagaattgatctcaaatgt 164 ||||||||| || ||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct: 101611 caagatggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgt 101670 Query: 165 tccggtgtacactagc 180 | |||| ||||||||| Sbjct: 101671 ttcggtctacactagc 101686
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 369 ctatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggtt 428 ||||||||| ||||| ||||||| ||| |||||| ||| || |||| || || || || Sbjct: 7274 ctatgttggaatgggaaaggatcgtactctcttctgtctcaaataaggacacgtgcgttt 7333 Query: 429 tgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcacac 488 |||||| || |||||||||||||| |||||| |||||||||| ||||| || ||||||| Sbjct: 7334 tgagcgcaacaagctgactggcagaaaatgggttcatgttgatcctgttgccgggcacat 7393 Query: 489 tctccaccctgtttacgccgatggttcagccactgcagctgacatggagctactgta 545 ||||||||||| |||||| || ||| ||||||| ||||| ||||||| |||||| Sbjct: 7394 gctccaccctgtctacgccagtgattcgaccactgctgctgaaatggagccactgta 7450 Score = 91.7 bits (46), Expect = 4e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||| Sbjct: 6876 agaaagtggagccaggaaatatcatcgtccgccaatgaggaacccgcttccatcctggga 6935 Query: 368 actatg 373 |||||| Sbjct: 6936 actatg 6941
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 369 ctatgttggcatggggaaggatcacactatcttctctctgaaggaaggccatgtacggtt 428 ||||||||| ||||| ||||||| ||| |||||| ||| || |||| || || || || Sbjct: 125178 ctatgttggaatgggaaaggatcgtactctcttctgtctcaaataaggacacgtgcgttt 125237 Query: 429 tgagcggaataagctgactggcaggaaatggattcatgttgaacctgtagctgggcacac 488 |||||| || |||||||||||||| |||||| |||||||||| ||||| || ||||||| Sbjct: 125238 tgagcgcaacaagctgactggcagaaaatgggttcatgttgatcctgttgccgggcacat 125297 Query: 489 tctccaccctgtttacgccgatggttcagccactgcagctgacatggagctactgta 545 ||||||||||| |||||| || ||| ||||||| ||||| ||||||| |||||| Sbjct: 125298 gctccaccctgtctacgccagtgattcgaccactgctgctgaaatggagccactgta 125354 Score = 91.7 bits (46), Expect = 4e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 308 agaaagtggaaccaggaaacatcatcgtacgacaaagaggaacccgcttccatcctggga 367 |||||||||| |||||||| |||||||| || ||| |||||||||||||||||||||||| Sbjct: 124780 agaaagtggagccaggaaatatcatcgtccgccaatgaggaacccgcttccatcctggga 124839 Query: 368 actatg 373 |||||| Sbjct: 124840 actatg 124845
>ref|NM_121526.3| Arabidopsis thaliana structural constituent of ribosome (AT5G15220) mRNA, complete cds Length = 795 Score = 87.7 bits (44), Expect = 6e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 240 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 299 Query: 279 gtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacg 338 || ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || || Sbjct: 300 gtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttcg 359 Query: 339 acaaagaggaacccgcttccatcctgggaactatgt 374 ||| | ||||| || || |||||||| ||||||| Sbjct: 360 tcaacggggaactcggtttcatcctggagactatgt 395
>gb|AY079120.1| Arabidopsis thaliana AT5g15220/F8M21_110 mRNA, complete cds Length = 465 Score = 87.7 bits (44), Expect = 6e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 132 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 191 Query: 279 gtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacg 338 || ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || || Sbjct: 192 gtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttcg 251 Query: 339 acaaagaggaacccgcttccatcctgggaactatgt 374 ||| | ||||| || || |||||||| ||||||| Sbjct: 252 tcaacggggaactcggtttcatcctggagactatgt 287
>gb|AY048281.1| Arabidopsis thaliana AT5g15220/F8M21_110 mRNA, complete cds Length = 701 Score = 87.7 bits (44), Expect = 6e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 240 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 299 Query: 279 gtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacg 338 || ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || || Sbjct: 300 gtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttcg 359 Query: 339 acaaagaggaacccgcttccatcctgggaactatgt 374 ||| | ||||| || || |||||||| ||||||| Sbjct: 360 tcaacggggaactcggtttcatcctggagactatgt 395
>emb|BX833043.1|CNS0A20U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 87.7 bits (44), Expect = 6e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 210 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 269 Query: 279 gtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacg 338 || ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || || Sbjct: 270 gtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttcg 329 Query: 339 acaaagaggaacccgcttccatcctgggaactatgt 374 ||| | ||||| || || |||||||| ||||||| Sbjct: 330 tcaacggggaactcggtttcatcctggagactatgt 365
>emb|BX833626.1|CNS0A0H8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 778 Score = 87.7 bits (44), Expect = 6e-14 Identities = 128/156 (82%) Strand = Plus / Plus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 223 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 282 Query: 279 gtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacg 338 || ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || || Sbjct: 283 gtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttcg 342 Query: 339 acaaagaggaacccgcttccatcctgggaactatgt 374 ||| | ||||| || || |||||||| ||||||| Sbjct: 343 tcaacggggaactcggtttcatcctggagactatgt 378
>emb|BX833009.1|CNS0A1ZU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 686 Score = 81.8 bits (41), Expect = 3e-12 Identities = 129/157 (82%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 219 gcgttgggctacaaa-aaagactgctgggtcaacaaaaaatggccgcgactctaacccca 277 |||||||||||| || ||| |||||||| || ||||| || || || |||||||| |||| Sbjct: 222 gcgttgggctactaagaaaaactgctggttctacaaagaacggtcgtgactctaatccca 281 Query: 278 agtatctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtac 337 ||| ||| |||||||||||||| || ||||||| ||| ||||||||||||||| || | Sbjct: 282 agtttctcggtgttaagaaattcggaggagagagtgtgataccaggaaacatcatagttc 341 Query: 338 gacaaagaggaacccgcttccatcctgggaactatgt 374 | ||| | ||||| || || |||||||| ||||||| Sbjct: 342 gtcaacggggaactcggtttcatcctggagactatgt 378
>ref|NM_179630.1| Arabidopsis thaliana structural constituent of ribosome (AT2G16930) mRNA, complete cds Length = 735 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 207 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 266 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 267 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 326 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 327 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 378
>ref|NM_127246.2| Arabidopsis thaliana structural constituent of ribosome (AT2G16930) mRNA, complete cds Length = 776 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 246 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 305 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 306 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 365 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 366 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 417
>gb|AY089018.1| Arabidopsis thaliana clone 17067 mRNA, complete sequence Length = 773 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 245 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 304 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 305 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 364 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 365 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 416
>gb|BT003674.1| Arabidopsis thaliana At2g16930 mRNA, complete cds Length = 465 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 116 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 175 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 176 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 235 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 236 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 287
>dbj|AK118574.1| Arabidopsis thaliana At2g16930 mRNA for putative 50S ribosomal protein L27, complete cds, clone: RAFL19-80-O09 Length = 682 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 207 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 266 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 267 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 326 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 327 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 378
>emb|BX821722.1|CNS0A875 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 673 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 156 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 215 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagagaaagtggaaccag 322 | |||||||| ||||||| ||| |||||||||||||| || ||||||| ||| ||| | Sbjct: 216 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagagagtgtgatacctg 275 Query: 323 gaaacatcatcgtacgacaaagaggaacccgcttccatcctgggaactatgt 374 |||||||||| || || ||| | ||||| || || |||||||| ||||||| Sbjct: 276 gaaacatcatagttcgtcaacgtggaactcggtttcatcctggagactatgt 327
>emb|CR956631.17| M.truncatula DNA sequence from clone MTH2-65L9 on chromosome 3, complete sequence Length = 126227 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 220 cgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaag 279 ||||||||||| |||||||| |||||||| ||||||||||| ||||| || || || ||| Sbjct: 119015 cgttgggctaccaaaaagacagctgggtccacaaaaaatggacgcgattcaaaacctaag 118956 Query: 280 tatctgggtgttaagaaatttggtggagag 309 | || || || |||||||||||||||||| Sbjct: 118955 aaccttggagtgaagaaatttggtggagag 118926
>gb|AC005167.3| Arabidopsis thaliana chromosome 2 clone F12A24 map mi398, complete sequence Length = 93861 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 203 tgagcttggttttgaggcgttgggctacaaaaaagactgctgggtcaacaaaaaatggcc 262 |||| ||||| |||| |||||||||||| || || || ||||| || ||||| || || | Sbjct: 48895 tgagtttggtcttgaagcgttgggctactaagaaaaccgctggttctacaaagaacggtc 48954 Query: 263 gcgactctaaccccaagtatctgggtgttaagaaatttggtggagag 309 | |||||||| ||||||| ||| |||||||||||||| || |||||| Sbjct: 48955 gtgactctaatcccaagtttcttggtgttaagaaattcggaggagag 49001
>emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome 5, BAC clone F8M21 (ESSA project) Length = 103996 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 219 gcgttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaa 278 |||||||||||| || || |||||||| || ||||| || || || |||||||| ||||| Sbjct: 45814 gcgttgggctactaagaaaactgctggttctacaaagaacggtcgtgactctaatcccaa 45755 Query: 279 gtatctgggtgttaagaaatttggtggagag 309 || ||| |||||||||||||| || |||||| Sbjct: 45754 gtttctcggtgttaagaaattcggaggagag 45724
>emb|BX821708.1|CNS0A89F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 640 Score = 67.9 bits (34), Expect = 5e-08 Identities = 124/154 (80%) Strand = Plus / Plus Query: 221 gttgggctacaaaaaagactgctgggtcaacaaaaaatggccgcgactctaaccccaagt 280 |||||||||| || || || ||||| || ||||| || || || |||||||| ||||||| Sbjct: 140 gttgggctactaagaaaaccgctggttctacaaagaacggtcgtgactctaatcccaagt 199 Query: 281 atctgggtgttaagaaatttggtggagagaaagtggaaccaggaaacatcatcgtacgac 340 ||| |||||||||||||| || ||||||| ||| ||| ||||||||||| || || | Sbjct: 200 ttcttggtgttaagaaattcggaggagagagtgtgatacctggaaacatcatagttcgtc 259 Query: 341 aaagaggaacccgcttccatcctgggaactatgt 374 || | ||||| || || |||||||| ||||||| Sbjct: 260 aacgtggaactcggtttcatcctggagactatgt 293
>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete sequence Length = 210748 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Plus Query: 586 agcttcctgggcatggctctgctgtt 611 |||||| ||||||||||||||||||| Sbjct: 38836 agcttcgtgggcatggctctgctgtt 38861
>gb|AC122396.4| Mus musculus BAC clone RP24-89O12 from chromosome 5, complete sequence Length = 205737 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 agcttcctgggcatggctctgctgtt 611 |||||| ||||||||||||||||||| Sbjct: 80108 agcttcgtgggcatggctctgctgtt 80083
>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23, complete sequence Length = 178472 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 tggttttgaggcgttgggctac 230 |||||||||||||||||||||| Sbjct: 127277 tggttttgaggcgttgggctac 127256
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 5953504 tttgttccagcaaaaatgtttc 5953525
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 11362923 tttgttccagcaaaaatgtttc 11362902
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 11842278 tttgttccagcaaaaatgtttc 11842257
>gb|AC105036.14| Homo sapiens chromosome 15, clone CTD-2323K18, complete sequence Length = 144333 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 394 actatcttctctctgaaggaag 415 |||||||||||||||||||||| Sbjct: 78451 actatcttctctctgaaggaag 78472
>dbj|AP006177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0734C01 Length = 163208 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 1633 tttgttccagcaaaaatgtttc 1612
>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0006M19 Length = 144073 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 110173 tttgttccagcaaaaatgtttc 110152
>dbj|AP007202.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa054B01 Length = 36624 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 33335 tttgttccagcaaaaatgtttc 33314
>emb|AL732382.5|CNS08C95 Oryza sativa chromosome 12, . BAC OJ1126_C09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104737 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 89554 tttgttccagcaaaaatgtttc 89533
>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 169662 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 643 tttgttccagcaaaaatgtttc 664 |||||||||||||||||||||| Sbjct: 149149 tttgttccagcaaaaatgtttc 149170
>gb|CP000362.1| Roseobacter denitrificans OCh 114, complete genome Length = 4133097 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 gttggcatggggaaggatcacactatctt 401 ||||||||||| ||||||||||| ||||| Sbjct: 2541823 gttggcatgggtaaggatcacacgatctt 2541795
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete sequence Length = 192494 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 agtatctgggtgttaagaaat 298 ||||||||||||||||||||| Sbjct: 47953 agtatctgggtgttaagaaat 47933
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 3.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 gttggcatggggaaggatcacactatctt 401 ||||||||||| ||||||||||| ||||| Sbjct: 2116624 gttggcatgggcaaggatcacacgatctt 2116596
>gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, complete sequence Length = 122505 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 710 cattttaagtatacattttgc 730 ||||||||||||||||||||| Sbjct: 117255 cattttaagtatacattttgc 117275
>gb|AC008411.5| Homo sapiens chromosome 5 clone CTC-281B15, complete sequence Length = 108098 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 710 cattttaagtatacattttgc 730 ||||||||||||||||||||| Sbjct: 100054 cattttaagtatacattttgc 100034
>gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complete sequence Length = 131132 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 agtatctgggtgttaagaaat 298 ||||||||||||||||||||| Sbjct: 50415 agtatctgggtgttaagaaat 50435
>emb|BX005275.25| Zebrafish DNA sequence from clone DKEY-118J18 in linkage group 24, complete sequence Length = 174489 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 647 ttccagcaaaaatgtttctgg 667 ||||||||||||||||||||| Sbjct: 96559 ttccagcaaaaatgtttctgg 96539 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 147,739,987 Number of extensions: 7726180 Number of successful extensions: 161022 Number of sequences better than 10.0: 49 Number of HSP's gapped: 161011 Number of HSP's successfully gapped: 74 Length of query: 797 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 775 Effective length of database: 18,508,616,841 Effective search space: 14344178051775 Effective search space used: 14344178051775 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
