ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf29c09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os06g0105200:Os06g0105200 | 35 | 0.078 | 2 | AK111228: | 34 | 0.17 | 3 | AB120662:Os03g0635100 | 32 | 1.1 | 4 | Os06g0147700:Os06g0147700 | 30 | 2.5 | 5 | AK109914:Os03g0342800 | 30 | 2.5 | 6 | AK065048:Os01g0279400 | 30 | 2.5 | 7 | AF543418:Os01g0279400 | 30 | 2.5 | 8 | AK120106:Os01g0966000 | 30 | 3.3 | 9 | AK067542:Os01g0966000 | 30 | 3.3 | 10 | Os09g0449400:Os09g0449400 | 30 | 4.3 | 11 | Os03g0237200:Os03g0237200 | 30 | 4.3 | 12 | D88618:Os12g0175400 | 30 | 4.3 | 13 | AK063027:Os12g0175400 | 30 | 4.3 | 14 | AK110376: | 29 | 5.6 | 15 | Os01g0927400:Os01g0927400 | 29 | 5.6 | 16 | AK101310:Os02g0611400 | 29 | 5.6 | 17 | Os12g0440200:Os12g0440200 | 29 | 7.3 | 18 | Os04g0468100:Os04g0468100 | 29 | 7.3 | 19 | AK065260:Os02g0799700 | 29 | 7.3 | 20 | Os01g0221700:Os01g0221700 | 28 | 9.5 | 21 | AK070646:Os05g0225800 | 28 | 9.5 | 22 | AK068836:Os02g0224100 | 28 | 9.5 | 23 | AK067205:Os02g0224100 | 28 | 9.5 |
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>Os06g0105200:Os06g0105200 | Length = 602 Score = 35.4 bits (80), Expect = 0.078 Identities = 20/63 (31%), Positives = 26/63 (41%) Frame = -1 Query: 582 GPGVYRRRRWRGAQLLALWHRCSWTLSPHALQDHLAVDAIMILVEEHTDPEAPCTRGPLV 403 G G RRRR RGA L W W A+D + + + +PCT G L Sbjct: 45 GDGGERRRRGRGAAALERWRCWEWQQPDSLAAAASALDELDVSSKTLLGLTSPCTTGGLT 104 Query: 402 SSW 394 + W Sbjct: 105 TEW 107
>AK111228: | Length = 764 Score = 34.3 bits (77), Expect = 0.17 Identities = 25/67 (37%), Positives = 32/67 (47%) Frame = +1 Query: 112 RPPDGDKHAEARVEGTTERRQWCAHVVSTQTSSRSVLAQARRRPTGHRPLPSHVGSVTVD 291 R D+HAE + E ERR+ A T +SS S+ ARRRP P + T Sbjct: 122 RRRQSDRHAERQRE-RRERRERLAREGLTSSSSTSLDDAARRRPHSGTSTPQTQAAGTGP 180 Query: 292 PSSLPGV 312 P S PG+ Sbjct: 181 PISRPGL 187
>AB120662:Os03g0635100 | Length = 93 Score = 31.6 bits (70), Expect = 1.1 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 477 AVDAIMILVEEHTDPEAPCTRGPLVSSWTPW 385 A+ +M+ E DP P T GP SW W Sbjct: 48 ALQELMVTAESKADPLLPVTTGPACQSWDRW 78
>Os06g0147700:Os06g0147700 | Length = 182 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/66 (34%), Positives = 27/66 (40%) Frame = -3 Query: 205 RSASTPHARTIASSPSCPPREPRHACRHPGADGSGDVDPTVGAPARRGPTTRSDVDSLSL 26 RSA AR IA+ P PP P CRH A S + T S +S+ Sbjct: 65 RSAYGAAARRIAAGPPLPPLPP-GCCRH-SASASAAAEATAMTICGSSQPRPSPAIIISI 122 Query: 25 ERCGKR 8 CGKR Sbjct: 123 GYCGKR 128
>AK109914:Os03g0342800 | Length = 219 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = -3 Query: 208 LRSASTPHARTIASSPSCPPREPRHACRHPGADGSGDVDPTVGAPARRGPTTRS 47 ++ TP AR+IA++P PPR P P G + G+ AR T + Sbjct: 7 IKFKKTPAARSIATTPPPPPRTPSPDPSPPPHAVGGGTESAQGSAARGSRATHA 60 Score = 28.5 bits (62), Expect = 9.5 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = -3 Query: 166 SPSCPPREPRH-ACRHPGADGSGDVDPTVGAPARR 65 +P+ R RH ACR G D + DP V AP R Sbjct: 85 APAVQIRRRRHRACRRRGRDAAAIADPAVAAPDGR 119
>AK065048:Os01g0279400 | Length = 497 Score = 30.4 bits (67), Expect = 2.5 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 15/101 (14%) Frame = -2 Query: 779 EPVHQHHPDHD------AESRTTNTSRPNSRGIPPMMGACPCV----PLMSIVIMNCVKT 630 E +H HH D + A+ T++ MG + LMS + + CV + Sbjct: 246 ETLHMHHDDKEVIDALEAQDATSDLGETTKESGSGRMGHTKSLLKNWQLMSAITLYCVFS 305 Query: 629 MNSP--MVAVG*W---SGCHRGLAFTADDGGEVLSCLHYGI 522 ++ + W S +RGL+FT+ D G VL+ +G+ Sbjct: 306 LHDTAYLEIFSLWAVSSRKYRGLSFTSQDVGIVLAISGFGV 346
>AF543418:Os01g0279400 | Length = 497 Score = 30.4 bits (67), Expect = 2.5 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 15/101 (14%) Frame = -2 Query: 779 EPVHQHHPDHD------AESRTTNTSRPNSRGIPPMMGACPCV----PLMSIVIMNCVKT 630 E +H HH D + A+ T++ MG + LMS + + CV + Sbjct: 246 ETLHMHHDDKEVIDALEAQDATSDLGETTKESGSGRMGHTKSLLKNWQLMSAITLYCVFS 305 Query: 629 MNSP--MVAVG*W---SGCHRGLAFTADDGGEVLSCLHYGI 522 ++ + W S +RGL+FT+ D G VL+ +G+ Sbjct: 306 LHDTAYLEIFSLWAVSSRKYRGLSFTSQDVGIVLAISGFGV 346
>AK120106:Os01g0966000 | Length = 1257 Score = 30.0 bits (66), Expect = 3.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 464 MASTARWSCSAWGDSVHE 517 M+ST RW WGD++HE Sbjct: 795 MSSTVRWQLKYWGDNLHE 812
>AK067542:Os01g0966000 | Length = 1257 Score = 30.0 bits (66), Expect = 3.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 464 MASTARWSCSAWGDSVHE 517 M+ST RW WGD++HE Sbjct: 795 MSSTVRWQLKYWGDNLHE 812
>Os09g0449400:Os09g0449400 | Length = 504 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 6/36 (16%) Frame = +3 Query: 987 LSSRMPLQSNKYVCEFSLQQF------*LNRRRHKV 1076 LS R L+S++YVCE Q F ++RRRHKV Sbjct: 55 LSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKV 90
>Os03g0237200:Os03g0237200 | Length = 415 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 6/38 (15%) Frame = +3 Query: 981 LVLSSRMPLQSNKYVCEFSLQQF------*LNRRRHKV 1076 + LS R L+S++YVCE Q F ++RRRHKV Sbjct: 43 VALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKV 80
>D88618:Os12g0175400 | Length = 304 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = +1 Query: 109 HRPPDGDKHAEARVEGTTERRQWCAHVVSTQTSSRSVLAQARRRPTGHRPLPSHVGSVTV 288 H PP + R RR +++ + L + RR P HRP P H +V V Sbjct: 152 HAPPAQCRRRRRRPPPPRRRR---LQLLARRNKRPQQLQRRRRVPRRHRPQPVHKPAVVV 208 Query: 289 DPSSLP 306 P+ P Sbjct: 209 VPAVFP 214
>AK063027:Os12g0175400 | Length = 295 Score = 29.6 bits (65), Expect = 4.3 Identities = 19/66 (28%), Positives = 27/66 (40%) Frame = +1 Query: 109 HRPPDGDKHAEARVEGTTERRQWCAHVVSTQTSSRSVLAQARRRPTGHRPLPSHVGSVTV 288 H PP + R RR +++ + L + RR P HRP P H +V V Sbjct: 143 HAPPAQCRRRRRRPPPPRRRR---LQLLARRNKRPQQLQRRRRVPRRHRPQPVHKPAVVV 199 Query: 289 DPSSLP 306 P+ P Sbjct: 200 VPAVFP 205
>AK110376: | Length = 896 Score = 29.3 bits (64), Expect = 5.6 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = -2 Query: 758 PDHDAESRTTNTSRPNSRGIPPMMGACPCVPL 663 PD D +SRTTN P R PP A P PL Sbjct: 146 PDKDQDSRTTN--HPPDRAAPPPPRAPPSPPL 175
>Os01g0927400:Os01g0927400 | Length = 760 Score = 29.3 bits (64), Expect = 5.6 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = -1 Query: 747 CRIADD*HQ-PSEF*GNTSDDGRMSMCSTDVHC--DHELCEDDEFTD 616 C +ADD Q P E N D + S+C DVHC + DD FTD Sbjct: 220 CFLADDGFQLPDE---NHVDKKQKSVCEKDVHCVSSPHVDLDDRFTD 263
>AK101310:Os02g0611400 | Length = 683 Score = 29.3 bits (64), Expect = 5.6 Identities = 12/13 (92%), Positives = 12/13 (92%) Frame = -1 Query: 183 RAPLPPLRRALHA 145 RAPLPPLRR LHA Sbjct: 22 RAPLPPLRRCLHA 34
>Os12g0440200:Os12g0440200 | Length = 1396 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Frame = -3 Query: 202 SASTPHARTIASSPSCPPREPRHACR--HPGADGSGDVDPTVGAPARRGPTTRSDVD 38 S++ R + PP P H R PG+ GSG VD P +T +D + Sbjct: 996 SSAGQTGRQAGQTAGTPPVRPAHEERSDQPGSSGSGTVDADRNGPPEITTSTSTDTE 1052
>Os04g0468100:Os04g0468100 | Length = 390 Score = 28.9 bits (63), Expect = 7.3 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -3 Query: 199 ASTPHARTIASSPSCPPREPRHACRHPGADGSGDVDPTVGAP 74 A+ P SSPS PR PRH+ R P +DG + P P Sbjct: 154 AAAPLHTAPPSSPSSSPR-PRHSARKPPSDGGRALLPLPRRP 194
>AK065260:Os02g0799700 | Length = 173 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 154 GTTERRQWCAHVVST--QTSSRSVLAQARRRPTGHRPLPSHVGSVTV 288 G E QW ++ + S + AQ RRR G RP PS + +V++ Sbjct: 114 GAVESGQWARRALAATIRPSPAAQQAQHRRRVAGLRPRPSRLSAVSM 160
>Os01g0221700:Os01g0221700 | Length = 266 Score = 28.5 bits (62), Expect = 9.5 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -3 Query: 202 SASTPHARTIASSPSCPPREPRHACRHPG 116 ++S PH R +P PPR PR A R PG Sbjct: 11 ASSLPHHRATTRAPPTPPRIPRRA-RLPG 38
>AK070646:Os05g0225800 | Length = 253 Score = 28.5 bits (62), Expect = 9.5 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Frame = -2 Query: 920 KSNLTTREESIEQPTP*RRTDTPACDKKAPEESWPA----IEA*NTEEPPDEPVHQHHPD 753 +S ++ E +P P + TP + K+ +S P + A EP EP + +P+ Sbjct: 104 ESKPESKAEPESKPEP-KAESTPQPEAKSEPKSEPKPKSELYAEPKSEPKSEPQSEPNPE 162 Query: 752 HDAESRTTNTSRPNSRGIP 696 AE ++ S P S P Sbjct: 163 TKAEPKSEPKSEPKSEPTP 181
>AK068836:Os02g0224100 | Length = 372 Score = 28.5 bits (62), Expect = 9.5 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Frame = +3 Query: 72 AGAPTVGSTSPLPSAPG-------WRQACRGSRGGHDGE 167 + A + G++SP PSA WRQAC + DGE Sbjct: 111 SSADSSGNSSPQPSASASAQMLEEWRQACASAFAAMDGE 149
>AK067205:Os02g0224100 | Length = 389 Score = 28.5 bits (62), Expect = 9.5 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Frame = +3 Query: 72 AGAPTVGSTSPLPSAPG-------WRQACRGSRGGHDGE 167 + A + G++SP PSA WRQAC + DGE Sbjct: 128 SSADSSGNSSPQPSASASAQMLEEWRQACASAFAAMDGE 166 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,666,950 Number of extensions: 1070408 Number of successful extensions: 4598 Number of sequences better than 10.0: 23 Number of HSP's gapped: 4583 Number of HSP's successfully gapped: 24 Length of query: 390 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 287 Effective length of database: 11,275,632 Effective search space: 3236106384 Effective search space used: 3236106384 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
