>A2VEC9:SSPO_HUMAN SCO-spondin precursor - Homo sapiens (Human)|
          Length = 5147
 Score = 36.6 bits (83), Expect = 0.21
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 426  PCTRG-PLVSSWTPWS-CWCTRPPASCKRHRHVKRT 325
            PC  G P  S WTPWS C  +  PA C RHR   R+
Sbjct: 3178 PCAEGEPTWSPWTPWSQCSASCGPARCHRHRFCARS 3213

>Q4P0G6:CWC21_USTMA Pre-mRNA-splicing factor CWC21 - Ustilago maydis (Smut fungus)|
          Length = 348

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 24/65 (36%), Positives = 29/65 (44%)
 Frame = -3

Query: 223 PRHFGLRSASTPHARTIASSPSCPPREPRHACRHPGADGSGDVDPTVGAPARRGPTTRSD 44
           P H   R +ST    T +SSPS PPR+ R   R    D S     +  +P    P T S 
Sbjct: 192 PPHPPARCSSTHSQSTSSSSPSSPPRK-RARSRSASQDSSARSSSSHASPRSPTPRTTSH 250

Query: 43  VDSLS 29
           V S S
Sbjct: 251 VASYS 255

>Q8CG65:SSPO_MOUSE SCO-spondin precursor - Mus musculus (Mouse)|
          Length = 4998

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 426  PCTRG-PLVSSWTPWSCWCTRPPASCKRHRH 337
            PC  G P  SSWTPWS  C+      +RHRH
Sbjct: 3014 PCEEGQPAWSSWTPWSV-CSASCNPARRHRH 3043

>P22157:VE4_HPV57 Probable protein E4 - Human papillomavirus type 57|
          Length = 124

 Score = 33.1 bits (74), Expect = 2.3
 Identities = 32/102 (31%), Positives = 42/102 (41%)
 Frame = -3

Query: 310 HLASCLDRRSPSRHATAXXXXXXXXXXXEPRHFGLRSASTPHARTIASSPSCPPREPRHA 131
           H   CL  R P R  T            +P+    +  S PH+RT       PPR  RH 
Sbjct: 19  HPHLCLVPRPPPRTTTHYPLLDLLRPQSQPQPQP-QQQSRPHSRT-------PPR--RHR 68

Query: 130 CRHPGADGSGDVDPTVGAPARRGPTTRSDVDSLSLERCGKRI 5
            RHP A GS   D +  +P  RG   RS+    S++  G  +
Sbjct: 69  VRHPSASGSSS-DSSGNSPTLRG---RSEKGRWSVKTTGASV 106

>P07871:THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal precursor - Rattus|
           norvegicus (Rat)
          Length = 424

 Score = 32.3 bits (72), Expect = 3.9
 Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +3

Query: 12  LPHLSKLSESTSDLVVGPRLAGAPTVGSTSPLPSAPGWRQAC-RGSRGGHDGE------E 170
           L HL+  SES+S L   P  AG P   S S +    G R    R  RGG           
Sbjct: 8   LGHLAGRSESSSALQAAPCSAGFPQ-ASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLS 66

Query: 171 AMVRACGVDADLKPKCLG 224
           A++ A   D  LKP+CLG
Sbjct: 67  AVLTAVLQDVKLKPECLG 84

>P23253:TCNA_TRYCR Sialidase - Trypanosoma cruzi|
          Length = 1162

 Score = 32.0 bits (71), Expect = 5.0
 Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 6/176 (3%)
 Frame = -3

Query: 544  SAACTMASVLMDAVAPCTTGPPRRGRHHD-----IGGGAHGS*S-PMHQGTTSVIMDALV 383
            S+A +  S  +D+ A  T   P     H      +   AHG+ S P      S       
Sbjct: 894  SSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPVDSSAHGTPSTPADSSAHSTPSTPAD 953

Query: 382  MLVHTSTSVLQTPSSCQAHNT*RAHLASCLDRRSPSRHATAXXXXXXXXXXXEPRHFGLR 203
               H++ S   TP+   AH+T    + S     +PS  A +              H    
Sbjct: 954  SSAHSTPS---TPADSSAHSTPSTPVDSSA-HSTPSTPADSSAHSTPSTPADSSAH---S 1006

Query: 202  SASTPHARTIASSPSCPPREPRHACRHPGADGSGDVDPTVGAPARRGPTTRSDVDS 35
            + STP   +  S+PS P     H+     AD S    P+  A +    T  + VDS
Sbjct: 1007 TPSTPADSSAHSTPSTPVDSSAHSTPSTPADSSAHGTPSTPADSSAHSTPSTPVDS 1062

>P28862:MMP3_MOUSE Stromelysin-1 precursor - Mus musculus (Mouse)|
          Length = 477

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 27  KLSESTSDLVVGPRLAGAPTVGSTSPLPSAPGWRQA 134
           KL  +T +L+  PR  G P VG  S  P +P WR++
Sbjct: 78  KLDSNTMELMHKPR-CGVPDVGGFSTFPGSPKWRKS 112

>O55123:MMP10_MOUSE Stromelysin-2 precursor - Mus musculus (Mouse)|
          Length = 476

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 27  KLSESTSDLVVGPRLAGAPTVGSTSPLPSAPGWRQA 134
           KL  +T +L+  PR  G P VG  S  P +P WR++
Sbjct: 78  KLDSNTMELMHKPR-CGVPDVGGFSTFPGSPKWRKS 112

>Q700K0:SSPO_RAT SCO-spondin precursor - Rattus norvegicus (Rat)|
          Length = 5141

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 426  PCTRG-PLVSSWTPWSCWCTRPPASCKRHR 340
            PC  G P  SSWTPWS  C+   +  +RHR
Sbjct: 3163 PCEEGQPAWSSWTPWSV-CSASCSPARRHR 3191

>Q64181:PROP_CAVPO Properdin precursor - Cavia porcellus (Guinea pig)|
          Length = 470

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
 Frame = -1

Query: 426 PCTRGPLVSSWTPWSCW--CTRPPASCKRHRHVKRTTRDVHTWQAAWIDGHRADMRRQGA 253
           PC   P+   W PW  W  CTRP  S  R + +      V   +    +G R   + Q  
Sbjct: 310 PC---PVDGEWEPWGDWSTCTRPHLSAIRCKEIVGQQTRVRICKGRKFNGQRCPGKHQEI 366

Query: 252 MACW 241
             C+
Sbjct: 367 RHCY 370

>Q92833:JARD2_HUMAN Protein Jumonji - Homo sapiens (Human)|
          Length = 1246

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 19/87 (21%)
 Frame = -1

Query: 375 CTRPPASCKRHRHV---------KRTTRDVHTWQAAWI----------DGHRADMRRQGA 253
           C   P   K H+HV          R+TR+    Q                HRAD RR+ A
Sbjct: 206 CQSTPRKGKTHKHVHNGHVFNGSSRSTREKEPVQKHKSKEATPAKEKHSDHRADSRREQA 265

Query: 252 MACWAAASLSQDTSA*GLRRHHMRAPL 172
            A   AA+ S  +SA GL   H   PL
Sbjct: 266 SANHPAAAPSTGSSAKGLAATHHHPPL 292

>P03957:MMP3_RAT Stromelysin-1 precursor - Rattus norvegicus (Rat)|
          Length = 475

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 27  KLSESTSDLVVGPRLAGAPTVGSTSPLPSAPGWRQ 131
           KL  +T +L+  PR  G P VG  S  P +P WR+
Sbjct: 76  KLDSNTMELMHKPR-CGVPDVGGFSTFPGSPKWRK 109

>Q8CB62:CNTRB_MOUSE Centrobin - Mus musculus (Mouse)|
          Length = 887

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 124 HPGADGSGDVDPTVGAPARRGPTTRSDVDSLSLER 20
           H G DG G++ P     +R G TTR ++ S ++ R
Sbjct: 822 HSGTDGQGELVPRRNTDSRLGETTRKEIPSQAVPR 856


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 222,306,540
Number of extensions: 5355395
Number of successful extensions: 17276
Number of sequences better than 10.0: 13
Number of HSP's gapped: 17189
Number of HSP's successfully gapped: 13
Length of query: 390
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 275
Effective length of database: 69,142,514
Effective search space: 19014191350
Effective search space used: 19014191350
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)