| Clone Name | FLbaf29c09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC126600.6| Mus musculus chromosome 1, clone RP23-145J9, complete sequence Length = 219130 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 654 aatggacatcagtggaacacatg 676 ||||||||||||||||||||||| Sbjct: 169837 aatggacatcagtggaacacatg 169815
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 236 gccgcccaacaggccatcgccc 257 |||||||||||||||||||||| Sbjct: 310914 gccgcccaacaggccatcgccc 310893
>gb|AC064836.7| Homo sapiens BAC clone RP11-686O6 from 2, complete sequence Length = 154754 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 tggtcccctggtgcatggggct 430 |||||||||||||||||||||| Sbjct: 78422 tggtcccctggtgcatggggct 78443
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1085 atgacgagttgatgtatatacttctcgtccctcgttg 1121 ||||||||||| || ||||||||||| ||||||||| Sbjct: 66587 atgacgagttgttggatatacttctcacccctcgttg 66623
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13, complete sequence Length = 102842 Score = 42.1 bits (21), Expect = 4.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1085 atgacgagttgatgtatatacttctcgtccctc 1117 |||||||| |||||||||||||| ||| ||||| Sbjct: 66809 atgacgagatgatgtatatacttatcgcccctc 66841
>dbj|AK114003.1| Ciona intestinalis cDNA, clone:cicl021d05, full insert sequence Length = 2290 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 769 tggacaggttcatcgggcggt 789 ||||||||||||||||||||| Sbjct: 970 tggacaggttcatcgggcggt 990
>gb|AF078801.1|AF078801 Hordeum vulgare degenerate retrotransposon cereba polyprotein pseudogene, partial sequence Length = 15230 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1085 atgacgagttgatgtatatacttctcgtccctcgttg 1121 ||||| || |||||||||||||||||| |||||||| Sbjct: 132 atgaccagatgatgtatatacttctcgctcctcgttg 96 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 155,826,295 Number of extensions: 7643648 Number of successful extensions: 130948 Number of sequences better than 10.0: 7 Number of HSP's gapped: 130948 Number of HSP's successfully gapped: 7 Length of query: 1170 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1147 Effective length of database: 18,503,978,556 Effective search space: 21224063403732 Effective search space used: 21224063403732 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)