ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf26h16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7VPK4:ISPH_HAEDU 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 37 0.31
2Q460N3:PAR15_HUMAN Poly [ADP-ribose] polymerase 15 - Homo sapien... 32 7.7

>Q7VPK4:ISPH_HAEDU 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Haemophilus|
            ducreyi
          Length = 314
 Score = 37.0 bits (84), Expect = 0.31
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
 Frame = +3

Query: 1644 MLAARVTVEDAIGLLLEVDDIDRLLQSSQAQDNCFQLRRRRQVLLEGLAASLQLVDPLGP 1823
            M    ++V+D  G++  + +    +Q  +  D C+    R+Q + E LA   QLV  +G 
Sbjct: 164  MTQTTLSVDDTSGMIEALKNKYPAIQGPRKNDICYATTNRQQAVRE-LAKQAQLVLVVGS 222

Query: 1824 SKSTNSSGLSGLAPKDDIVFLRIVSLPKGRKLLARYLRL-----IAAGSELTRIVCMAIF 1988
              S+NS+ L+ LA +   V  +++  P  + +L  +L       I AG+    I+  ++ 
Sbjct: 223  KNSSNSNRLAELASRMG-VLAKLIDGP--QDILPEWLDNVETIGITAGASAPEILVQSVV 279

Query: 1989 RHLR 2000
             HL+
Sbjct: 280  AHLQ 283



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>Q460N3:PAR15_HUMAN Poly [ADP-ribose] polymerase 15 - Homo sapiens (Human)|
          Length = 656

 Score = 32.3 bits (72), Expect = 7.7
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
 Frame = +3

Query: 1344 HSASHSSDPYVVDYYHQACMAKKGSTSRQKISF----SPTSIKDLPSKSRSNGDQHAYLQ 1511
            H     S PYV  +      A K + S  K ++    +  S KD  SK  SNG +H Y+ 
Sbjct: 537  HGTDADSVPYVNQHGFNRSCAGKNAVSYGKGTYFAVDASYSAKDTYSKPDSNGRKHMYVV 596

Query: 1512 VDALGRVSFSSIRRPRSLLEVDHPSSGEGPHDQKSSVRSLEKEPML 1649
                 RV      + R+ L    P +   P D   SV +  + P L
Sbjct: 597  -----RVLTGVFTKGRAGLVTPPPKNPHNPTDLFDSVTNNTRSPKL 637


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 330,668,018
Number of extensions: 7313565
Number of successful extensions: 21381
Number of sequences better than 10.0: 2
Number of HSP's gapped: 21305
Number of HSP's successfully gapped: 2
Length of query: 680
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 560
Effective length of database: 67,771,039
Effective search space: 37951781840
Effective search space used: 37951781840
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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