ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf26h10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK059382:Os07g0164200 | 100 | 8e-22 | 2 | AK107096:Os07g0164200 | 95 | 2e-20 | 3 | AK099351:Os07g0164300 | 52 | 7e-09 | 4 | AK073327:Os07g0164300 | 52 | 7e-09 | 5 | Os07g0528900:Os07g0528900 | 41 | 6e-04 | 6 | AK100316:Os06g0168500 | 42 | 8e-04 | 7 | AK066544:Os07g0102100 | 33 | 0.30 | 8 | AK109007:Os03g0841600 | 33 | 0.39 | 9 | AK062594:Os07g0187900 | 30 | 2.5 | 10 | AK073197:Os10g0511600 | 30 | 3.3 | 11 | AK062445:Os02g0213100 | 30 | 3.3 | 12 | AK064265:Os01g0660000 | 30 | 4.3 | 13 | AK120650:Os06g0534800 | 29 | 7.3 | 14 | AK108739:Os06g0534800 | 29 | 7.3 | 15 | AK122116:Os08g0363200 | 29 | 7.4 | 16 | AK106254:Os06g0573700 | 29 | 7.4 | 17 | AK064067:Os08g0363200 | 29 | 7.4 | 18 | Os03g0337500:Os03g0337500 | 28 | 9.6 | 19 | AK111233: | 28 | 9.6 |
|---|
>AK059382:Os07g0164200 | Length = 141 Score = 99.8 bits (247), Expect(2) = 8e-22 Identities = 47/58 (81%), Positives = 53/58 (91%) Frame = +2 Query: 245 QEPPMLKTAASVPSLRQNAGRVKPGDVGRIIARKPKDVWAVRLAVGTYLLDGKHFKPL 418 + P MLKTAASVPSLR NAG+VK GDVGR++ARKPKDVWAVRLA+GTYLLDGK+FK L Sbjct: 72 EAPVMLKTAASVPSLRHNAGQVKAGDVGRVMARKPKDVWAVRLAIGTYLLDGKYFKTL 129 Score = 22.7 bits (47), Expect(2) = 8e-22 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 Query: 207 KANLKVGSPIVII 245 K L+VGSPIVI+ Sbjct: 59 KGKLRVGSPIVIV 71
>AK107096:Os07g0164200 | Length = 142 Score = 95.1 bits (235), Expect(2) = 2e-20 Identities = 47/59 (79%), Positives = 53/59 (89%), Gaps = 1/59 (1%) Frame = +2 Query: 245 QEPPMLKTAASVPSLRQNAGRVKPGDVG-RIIARKPKDVWAVRLAVGTYLLDGKHFKPL 418 + P MLKTAASVPSLR NAG+VK GDVG R++ARKPKDVWAVRLA+GTYLLDGK+FK L Sbjct: 72 EAPVMLKTAASVPSLRHNAGQVKAGDVGSRVMARKPKDVWAVRLAIGTYLLDGKYFKTL 130 Score = 22.7 bits (47), Expect(2) = 2e-20 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +3 Query: 207 KANLKVGSPIVII 245 K L+VGSPIVI+ Sbjct: 59 KGKLRVGSPIVIV 71
>AK099351:Os07g0164300 | Length = 303 Score = 51.6 bits (122), Expect(2) = 7e-09 Identities = 23/29 (79%), Positives = 26/29 (89%) Frame = -2 Query: 995 VSNATDHIQQGVGGLKKAKKLQKNTRKWM 909 VSNAT+HIQQGV L+ AKKLQKN+RKWM Sbjct: 249 VSNATNHIQQGVSALQNAKKLQKNSRKWM 277 Score = 26.9 bits (58), Expect(2) = 7e-09 Identities = 10/16 (62%), Positives = 15/16 (93%) Frame = -3 Query: 1126 LSESQGDMMNDIDTHV 1079 L ++QGDM+N+I+THV Sbjct: 234 LVDAQGDMINNIETHV 249
>AK073327:Os07g0164300 | Length = 303 Score = 51.6 bits (122), Expect(2) = 7e-09 Identities = 23/29 (79%), Positives = 26/29 (89%) Frame = -2 Query: 995 VSNATDHIQQGVGGLKKAKKLQKNTRKWM 909 VSNAT+HIQQGV L+ AKKLQKN+RKWM Sbjct: 249 VSNATNHIQQGVSALQNAKKLQKNSRKWM 277 Score = 26.9 bits (58), Expect(2) = 7e-09 Identities = 10/16 (62%), Positives = 15/16 (93%) Frame = -3 Query: 1126 LSESQGDMMNDIDTHV 1079 L ++QGDM+N+I+THV Sbjct: 234 LVDAQGDMINNIETHV 249
>Os07g0528900:Os07g0528900 | Length = 1790 Score = 40.8 bits (94), Expect(2) = 6e-04 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = -2 Query: 1001 SKVSNATDHIQQGVGGLKKAKKLQKNTRKWM 909 ++V NA DHIQ+G G L+ AK+LQK +RK M Sbjct: 1736 NQVQNAVDHIQRGTGELRTAKRLQKKSRKCM 1766 Score = 20.8 bits (42), Expect(2) = 6e-04 Identities = 7/17 (41%), Positives = 13/17 (76%) Frame = -3 Query: 1126 LSESQGDMMNDIDTHVR 1076 L ++QG+ +NDI+ V+ Sbjct: 1723 LVDAQGETLNDIENQVQ 1739
>AK100316:Os06g0168500 | Length = 305 Score = 42.0 bits (97), Expect = 8e-04 Identities = 22/54 (40%), Positives = 26/54 (48%) Frame = -2 Query: 1001 SKVSNATDHIQQGVGGLKKAKKLQKNTRKWMSCNXXXXXXXXXXXXXIKWPWKK 840 S+VS A +HIQ G L+KA+ LQKNTRKW PW K Sbjct: 252 SQVSGAAEHIQTGTNLLQKARFLQKNTRKWTCIGIVILLIIILIVVLSLKPWSK 305
>AK066544:Os07g0102100 | Length = 808 Score = 33.5 bits (75), Expect = 0.30 Identities = 21/75 (28%), Positives = 37/75 (49%) Frame = +3 Query: 300 PAASSPATSGG*LRGNQRTSGPCGLPSARTCWTGSTSSPWRSSTTKATTINPEMNEHQIQ 479 P S+P+ S R + RT+ P PS+ + S+ PW S+T + +P + + Sbjct: 129 PPRSAPSGS----RTSSRTAAPSASPSSSS---PSSPPPWSSATPASRPPSPS-SPPSVA 180 Query: 480 QHTAKHSEYMLVWCT 524 T +H+ ++VW T Sbjct: 181 SRTRRHTSTLVVWVT 195
>AK109007:Os03g0841600 | Length = 389 Score = 33.1 bits (74), Expect = 0.39 Identities = 21/62 (33%), Positives = 27/62 (43%) Frame = +2 Query: 131 PGISSPTMLRRHSRPVREPRHA*HLEGEPEGRLADRHHQEPPMLKTAASVPSLRQNAGRV 310 P P RR RP R+ RH +G P R HH PP A+ P R+ G+ Sbjct: 34 PAPPRPRRRRRGDRPARQRRHLGRRDGAPR-RGQPVHHVPPP---AGAAQPGRRRAPGQA 89 Query: 311 KP 316 +P Sbjct: 90 RP 91
>AK062594:Os07g0187900 | Length = 253 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%) Frame = +3 Query: 300 PAASSPATSGG*LRGNQRTSG--PCGLPSARTCWTGSTSSPWRSSTTK----ATTINPE 458 PAA+ A++ R +S PC S+R+CW+G R ++T+ AT +PE Sbjct: 153 PAATRCASASTASRSPSSSSRLPPCSARSSRSCWSGGRGDSTRGTSTRGSATATAPSPE 211
>AK073197:Os10g0511600 | Length = 490 Score = 30.0 bits (66), Expect = 3.3 Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 1/108 (0%) Frame = +3 Query: 360 GPCGLPSARTCWTGSTSSPWRSSTTKATTINPEMNEHQIQQHTAKHSEYMLVWCTNCNKW 539 G + +++ +T + PWR H +Q ++K+ ++ C NC Sbjct: 395 GGTRIAASKIVFTNGSQDPWR---------------HASKQKSSKYMPSYIIKCRNCGHG 439 Query: 540 IQQHGC-TFPFQR*NSLST*STNELAAASRDFVRLNIGTAIEDCESDT 680 GC PF+ S S+ + R + +I + C+ T Sbjct: 440 TDLRGCPQLPFRIEGDPSNCSSPAAVSTVRKQIASHISLWLSQCQEPT 487
>AK062445:Os02g0213100 | Length = 84 Score = 30.0 bits (66), Expect = 3.3 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +2 Query: 80 ATASGCRCFLLRPAAAIPGISSPTMLRRHSRPVREP 187 A SGC C +P + I G+SSP +L +RP + P Sbjct: 23 AATSGCFC--RQPPSPIAGVSSPPILPDGNRPPKSP 56
>AK064265:Os01g0660000 | Length = 162 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +3 Query: 372 LPSARTCWTGSTSSPWRSSTTKATTINPEMNEHQ 473 L S R C TGS SS ++ T ATT +P N H+ Sbjct: 53 LLSQRHCRTGSGSSRSGTTATAATTFSPAANLHR 86
>AK120650:Os06g0534800 | Length = 356 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 185 VHAPDGYGGGASSGWKCRESQRRGAVGNSG 96 VH P GGG ++G + RE RR G G Sbjct: 79 VHVPGARGGGVAAGRRRREEGRRQRQGEGG 108
>AK108739:Os06g0534800 | Length = 356 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 185 VHAPDGYGGGASSGWKCRESQRRGAVGNSG 96 VH P GGG ++G + RE RR G G Sbjct: 79 VHVPGARGGGVAAGRRRREEGRRQRQGEGG 108
>AK122116:Os08g0363200 | Length = 114 Score = 28.9 bits (63), Expect = 7.4 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 399 PSSRYVPTASRTAQTSFGFRAIILPTSPGLTRPAFCRS 286 P S P+ SR + + GF ++ LP PGL PA RS Sbjct: 44 PISAVAPSPSRPRRRT-GFESLALPLIPGLLNPASRRS 80
>AK106254:Os06g0573700 | Length = 249 Score = 28.9 bits (63), Expect = 7.4 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -1 Query: 195 ACRGSRTGRLWRRSIVGLEMPGIAAAGRSRKQRQPL----AVASCPSET 61 AC + GR+W+R G E G AG R+QR+ AV C S + Sbjct: 182 ACDWASGGRVWKRMAGGSE-AGSVGAGERRRQRRAAAGGGAVGQCTSSS 229
>AK064067:Os08g0363200 | Length = 114 Score = 28.9 bits (63), Expect = 7.4 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 399 PSSRYVPTASRTAQTSFGFRAIILPTSPGLTRPAFCRS 286 P S P+ SR + + GF ++ LP PGL PA RS Sbjct: 44 PISAVAPSPSRPRRRT-GFESLALPLIPGLLNPASRRS 80
>Os03g0337500:Os03g0337500 | Length = 337 Score = 28.5 bits (62), Expect = 9.6 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 18/99 (18%) Frame = +2 Query: 131 PGISSPTM-LRRHSRPVREPRHA*HLEGEPEGRL--------ADRHHQE------PPMLK 265 PG + P+ +++++R R PRH L G P GR D H+E P +L+ Sbjct: 24 PGPAPPSKRIKQNAR--RAPRHDTSLAGAPHGRCCCCCPPRHCDGVHEEIGRSGRPALLR 81 Query: 266 TAASVPS---LRQNAGRVKPGDVGRIIARKPKDVWAVRL 373 +A + S + Q GR + GR + +D W L Sbjct: 82 SATNPASPCFVLQVLGRAMDLEFGRGMRSPQRDSWKTTL 120
>AK111233: | Length = 592 Score = 28.5 bits (62), Expect = 9.6 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = +2 Query: 32 AQRPLPYLHPVSEGQDATASGC-RCFLLRPAAAIPGISSPTMLRRHSRPVREPRHA*HLE 208 A+R P L + +ATA+ + PAAA+ ++PT + + R HA Sbjct: 333 ARRSSPSLLDNLQTSNATAATSEQASAPAPAAAVTAPAAPTSVVVGATAPRNQPHANPRR 392 Query: 209 GEP-EGRLADRHHQEPPMLKTAASVPS 286 P + A HHQ P +++S P+ Sbjct: 393 SSPKDNSPAHHHHQTSPQQHSSSSAPA 419 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,555,295 Number of extensions: 752925 Number of successful extensions: 2386 Number of sequences better than 10.0: 19 Number of HSP's gapped: 2382 Number of HSP's successfully gapped: 24 Length of query: 392 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 289 Effective length of database: 11,275,632 Effective search space: 3258657648 Effective search space used: 3258657648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
