| Clone Name | FLbaf26h10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001065493.1| Oryza sativa (japonica cultivar-group) Os07g0164200 (Os07g0164200) mRNA, complete cds Length = 631 Score = 180 bits (91), Expect = 8e-42 Identities = 157/179 (87%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 245 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 304 Query: 317 ggcgacgtcgggaggataattgcgcggaaaccaaaggacgtctgggccgtgcggcttgcc 376 ||||||||||||||| | || |||||||| || ||||||||||||||||||||||| ||| Sbjct: 305 ggcgacgtcgggagggtgatggcgcggaagccgaaggacgtctgggccgtgcggctcgcc 364 Query: 377 gtcggcacgtacctgctggacgggaagcacttcaagcccctggaggtcgtcgacgacga 435 |||| || |||||| ||||||| ||| | |||||| | ||||| |||| ||||||||| Sbjct: 365 atcggaacctacctgttggacggcaagtatttcaagacactggacgtcgacgacgacga 423
>dbj|AK059382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G04, full insert sequence Length = 631 Score = 180 bits (91), Expect = 8e-42 Identities = 157/179 (87%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 245 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 304 Query: 317 ggcgacgtcgggaggataattgcgcggaaaccaaaggacgtctgggccgtgcggcttgcc 376 ||||||||||||||| | || |||||||| || ||||||||||||||||||||||| ||| Sbjct: 305 ggcgacgtcgggagggtgatggcgcggaagccgaaggacgtctgggccgtgcggctcgcc 364 Query: 377 gtcggcacgtacctgctggacgggaagcacttcaagcccctggaggtcgtcgacgacga 435 |||| || |||||| ||||||| ||| | |||||| | ||||| |||| ||||||||| Sbjct: 365 atcggaacctacctgttggacggcaagtatttcaagacactggacgtcgacgacgacga 423
>emb|CT828984.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA037P02, full insert sequence Length = 1309 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 231 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 290 Query: 317 ggcgacgtcgggaggataattgcgcggaaaccaaaggacgtctgggc 363 ||||||||||||||| | || |||||||| || |||||||||||||| Sbjct: 291 ggcgacgtcgggagggtgatggcgcggaagccgaaggacgtctgggc 337 Score = 71.9 bits (36), Expect = 5e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 735 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 794 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaaccttg 999 ||| ||| || ||||| |||||||||| ||||||||||||||||||| Sbjct: 795 agagcactgacgccttgttgtatgtggttggtagcatttgaaaccttg 842 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1076 tcttacatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 936 tcttacatgtgtctctatgttgttgatcatgtctccttgag 976
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 3477353 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 3477412 Query: 317 ggcgacgtcgggagg 331 ||||||||||||||| Sbjct: 3477413 ggcgacgtcgggagg 3477427 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 338 gcgcggaaaccaaaggacgtctgggccgtgcggcttgccgtcggcacgtacctgctggac 397 |||||||| || ||||||||||||||||||||||| ||| |||| || |||||| ||||| Sbjct: 3478298 gcgcggaagccgaaggacgtctgggccgtgcggctcgccatcggaacctacctgttggac 3478357 Query: 398 gggaagcacttcaagcccctggaggtcgtcgacgacga 435 || ||| | |||||| | ||||| |||| ||||||||| Sbjct: 3478358 ggcaagtatttcaagacactggacgtcgacgacgacga 3478395 Score = 71.9 bits (36), Expect = 5e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 3478820 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 3478879 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaaccttg 999 ||| ||| || ||||| |||||||||| ||||||||||||||||||| Sbjct: 3478880 agagcactgacgccttgttgtatgtggttggtagcatttgaaaccttg 3478927 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1076 tcttacatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 3479021 tcttacatgtgtctctatgttgttgatcatgtctccttgag 3479061
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0428D12 Length = 141678 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 117173 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 117232 Query: 317 ggcgacgtcgggagg 331 ||||||||||||||| Sbjct: 117233 ggcgacgtcgggagg 117247 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 338 gcgcggaaaccaaaggacgtctgggccgtgcggcttgccgtcggcacgtacctgctggac 397 |||||||| || ||||||||||||||||||||||| ||| |||| || |||||| ||||| Sbjct: 118118 gcgcggaagccgaaggacgtctgggccgtgcggctcgccatcggaacctacctgttggac 118177 Query: 398 gggaagcacttcaagcccctggaggtcgtcgacgacga 435 || ||| | |||||| | ||||| |||| ||||||||| Sbjct: 118178 ggcaagtatttcaagacactggacgtcgacgacgacga 118215 Score = 71.9 bits (36), Expect = 5e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 118640 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 118699 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaaccttg 999 ||| ||| || ||||| |||||||||| ||||||||||||||||||| Sbjct: 118700 agagcactgacgccttgttgtatgtggttggtagcatttgaaaccttg 118747 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1076 tcttacatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 118841 tcttacatgtgtctctatgttgttgatcatgtctccttgag 118881
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 15303 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 15362 Query: 317 ggcgacgtcgggagg 331 ||||||||||||||| Sbjct: 15363 ggcgacgtcgggagg 15377 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 338 gcgcggaaaccaaaggacgtctgggccgtgcggcttgccgtcggcacgtacctgctggac 397 |||||||| || ||||||||||||||||||||||| ||| |||| || |||||| ||||| Sbjct: 16248 gcgcggaagccgaaggacgtctgggccgtgcggctcgccatcggaacctacctgttggac 16307 Query: 398 gggaagcacttcaagcccctggaggtcgtcgacgacga 435 || ||| | |||||| | ||||| |||| ||||||||| Sbjct: 16308 ggcaagtatttcaagacactggacgtcgacgacgacga 16345 Score = 71.9 bits (36), Expect = 5e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 16770 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 16829 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaaccttg 999 ||| ||| || ||||| |||||||||| ||||||||||||||||||| Sbjct: 16830 agagcactgacgccttgttgtatgtggttggtagcatttgaaaccttg 16877 Score = 58.0 bits (29), Expect = 7e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 1076 tcttacatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 16971 tcttacatgtgtctctatgttgttgatcatgtctccttgag 17011
>dbj|AK107096.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-H07, full insert sequence Length = 1903 Score = 109 bits (55), Expect = 2e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 257 atgctcaagaccgccgcgtcggtgccgtcgctccggcagaacgccggccgcgtcaagccc 316 ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||| || Sbjct: 239 atgctcaagaccgccgcgtcggtgccgtcgctcaggcacaacgccggccaggtcaaggcc 298 Query: 317 ggcgacgtcgggagg 331 ||||||||||||||| Sbjct: 299 ggcgacgtcgggagg 313 Score = 83.8 bits (42), Expect = 1e-12 Identities = 84/98 (85%) Strand = Plus / Plus Query: 338 gcgcggaaaccaaaggacgtctgggccgtgcggcttgccgtcggcacgtacctgctggac 397 |||||||| || ||||||||||||||||||||||| ||| |||| || |||||| ||||| Sbjct: 1184 gcgcggaagccgaaggacgtctgggccgtgcggctcgccatcggaacctacctgttggac 1243 Query: 398 gggaagcacttcaagcccctggaggtcgtcgacgacga 435 || ||| | |||||| | ||||| |||| ||||||||| Sbjct: 1244 ggcaagtatttcaagacactggacgtcgacgacgacga 1281 Score = 71.9 bits (36), Expect = 5e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 1706 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 1765 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaaccttg 999 ||| ||| || ||||| |||||||||| ||||||||||||||||||| Sbjct: 1766 agagcactgacgccttgttgtatgtggttggtagcatttgaaaccttg 1813
>ref|NM_001065494.1| Oryza sativa (japonica cultivar-group) Os07g0164300 (Os07g0164300) mRNA, complete cds Length = 1273 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 948 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 889 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaac 995 ||| ||| || ||||| |||||||||| ||||||||||||||| Sbjct: 888 agagcactgacgccttgttgtatgtggttggtagcatttgaaac 845 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1080 acatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||| ||||||| ||| |||||||||||||||| Sbjct: 846 acatgtgtctctatgttgttgatcatgtctccttgag 810
>dbj|AK099351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B17, full insert sequence Length = 1275 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 950 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 891 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaac 995 ||| ||| || ||||| |||||||||| ||||||||||||||| Sbjct: 890 agagcactgacgccttgttgtatgtggttggtagcatttgaaac 847 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1080 acatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||| ||||||| ||| |||||||||||||||| Sbjct: 848 acatgtgtctctatgttgttgatcatgtctccttgag 812
>dbj|AK073327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B18, full insert sequence Length = 1275 Score = 63.9 bits (32), Expect = 1e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 892 aggatgatgttgcagctcatccactttctcgtgttcttctgcagcttctttgccttcttg 951 ||||||||| | ||| ||||||||| || | ||||||||| |||||||| || |||| Sbjct: 950 aggatgatggcgtagcacatccacttcctggagttcttctggagcttcttcgcgttctgt 891 Query: 952 agaccacccacaccttgctgtatgtggtcggtagcatttgaaac 995 ||| ||| || ||||| |||||||||| ||||||||||||||| Sbjct: 890 agagcactgacgccttgttgtatgtggttggtagcatttgaaac 847 Score = 50.1 bits (25), Expect = 0.018 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1080 acatgtgtatctatgtcgttcatcatgtctccttgag 1116 |||||||| ||||||| ||| |||||||||||||||| Sbjct: 848 acatgtgtctctatgttgttgatcatgtctccttgag 812
>gb|AC008862.5| Homo sapiens chromosome 5 clone CTD-2187G18, complete sequence Length = 92650 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 925 ttcttctgcagcttctttgcctt 947 ||||||||||||||||||||||| Sbjct: 91961 ttcttctgcagcttctttgcctt 91983
>gb|AC025800.10| Homo sapiens chromosome 8, clone RP11-600N23, complete sequence Length = 185359 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Plus Query: 925 ttcttctgcagcttctttgcctt 947 ||||||||||||||||||||||| Sbjct: 63200 ttcttctgcagcttctttgcctt 63222
>emb|X58833.1|SCACTVA S.coelicolor 6 actVA region genes of the actinorhodin biosynthetic gene cluster Length = 5400 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 aggtcgtcgacgacgaaggcgac 442 ||||||||||||||||||||||| Sbjct: 1839 aggtcgtcgacgacgaaggcgac 1817
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 46.1 bits (23), Expect = 0.29 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 aggtcgtcgacgacgaaggcgac 442 ||||||||||||||||||||||| Sbjct: 149714 aggtcgtcgacgacgaaggcgac 149692
>gb|AF480890.3| Acanthamoeba castellanii metacaspase (MCASP1) mRNA, complete cds Length = 1658 Score = 46.1 bits (23), Expect = 0.29 Identities = 26/27 (96%) Strand = Plus / Minus Query: 925 ttcttctgcagcttctttgccttcttg 951 ||||||||||||||||| ||||||||| Sbjct: 1145 ttcttctgcagcttcttggccttcttg 1119
>ref|XM_001213984.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_04806) mRNA, complete cds Length = 3390 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 935 gcttctttgccttcttgagacc 956 |||||||||||||||||||||| Sbjct: 754 gcttctttgccttcttgagacc 733
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 aggtcgtcgacgacgaaggcga 441 |||||||||||||||||||||| Sbjct: 1574998 aggtcgtcgacgacgaaggcga 1574977
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 422 gtcgtcgacgacgaaggcgacg 443 |||||||||||||||||||||| Sbjct: 5045089 gtcgtcgacgacgaaggcgacg 5045110
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence Length = 158245 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 925 ttcttctgcagcttctttgccttctt 950 |||||||||| ||||||||||||||| Sbjct: 71454 ttcttctgcatcttctttgccttctt 71429
>emb|AL590116.8| Human DNA sequence from clone RP13-91J12 on chromosome X, complete sequence Length = 120044 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 925 ttcttctgcagcttctttgcct 946 |||||||||||||||||||||| Sbjct: 102400 ttcttctgcagcttctttgcct 102379
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 371 cttgccgtcggcacgtacctgc 392 |||||||||||||||||||||| Sbjct: 4815361 cttgccgtcggcacgtacctgc 4815382
>dbj|AK108916.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-H03, full insert sequence Length = 1532 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacgat 448 |||||||||||||||||||||| Sbjct: 1089 cgacgacgaaggcgacgacgat 1110
>emb|BX322550.7| Zebrafish DNA sequence from clone DKEY-202N14 in linkage group 5, complete sequence Length = 184426 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 781 tgtctatatataaatatattct 802 |||||||||||||||||||||| Sbjct: 11952 tgtctatatataaatatattct 11973
>emb|AL954191.5| Zebrafish DNA sequence from clone CH211-230G14, complete sequence Length = 151595 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 781 tgtctatatataaatatattct 802 |||||||||||||||||||||| Sbjct: 17080 tgtctatatataaatatattct 17059
>dbj|AB259663.1| Streptomyces griseus orfA, griT, griS, griR, griA, griB, griC, griD, griE, griF, griG, griH, griI, griJ, orf1 genes for hypothetical protein, putative LuxR-family transcriptional regulator, putative regulator of grixazone biosynthesis, transcriptional activator for grixazone biosynthesis, putative FAD-dependent oxygenase, putative grixazone transporter, hypothetical protein, hypothetical protein, copper chaperon for GriF, o-aminophenol oxidase, putative benzoate transport protein, 3,4-AHBA synthase, DhnA-type aldolase, aspartokinase homologue, hypothetical protein, complete cds, strain: IFO 13350 Length = 19000 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 13797 cgacgacgaaggcgacgacga 13817
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 775 aaacagtgtctatatataaatatat 799 |||||||||||||||||| |||||| Sbjct: 17045438 aaacagtgtctatatatatatatat 17045462
>ref|XM_629978.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0184052) mRNA, complete cds Length = 1194 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 atgaatgagcatcagatccagcaac 483 ||||||||| ||||||||||||||| Sbjct: 586 atgaatgaggatcagatccagcaac 562
>gb|AC152103.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A1, complete sequence Length = 40624 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 27074 cgacgacgaaggcgacgacga 27054
>gb|AC012160.7| Drosophila melanogaster clone BACR06G02, complete sequence Length = 172069 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 775 aaacagtgtctatatataaatatat 799 |||||||||||||||||| |||||| Sbjct: 83342 aaacagtgtctatatatatatatat 83366
>gb|AC010921.12| Drosophila melanogaster clone BACR15L12, complete sequence Length = 163466 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 775 aaacagtgtctatatataaatatat 799 |||||||||||||||||| |||||| Sbjct: 20364 aaacagtgtctatatatatatatat 20340
>ref|XM_381121.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00945.1) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 705 cgacgacgaaggcgacgacga 725
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 aggtcggctcgccgatcgtca 240 ||||||||||||||||||||| Sbjct: 1797962 aggtcggctcgccgatcgtca 1797982 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 tgctcaagaccgccgcgtcgg 278 ||||||||||||||||||||| Sbjct: 4636365 tgctcaagaccgccgcgtcgg 4636345
>gb|DQ013150.1| Verticillium dahliae microsatellite VDA815 sequence Length = 440 Score = 42.1 bits (21), Expect = 4.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 419 gaggtcgtcgacgacgaaggcgacgacga 447 ||||||||||||||||| | ||||||||| Sbjct: 341 gaggtcgtcgacgacgacgacgacgacga 369
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 10366749 cgacgacgaaggcgacgacga 10366769
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 25756135 cgacgacgaaggcgacgacga 25756155
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 68478 cgacgacgaaggcgacgacga 68498
>emb|AL136230.9| Human DNA sequence from clone RP1-95I21 on chromosome 6, complete sequence Length = 120515 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 ttcagcaacatggatgcacat 561 ||||||||||||||||||||| Sbjct: 106405 ttcagcaacatggatgcacat 106385
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacgatcaa 451 ||||||||||| ||||||||||||| Sbjct: 14328 cgacgacgaagacgacgacgatcaa 14352
>gb|BC097693.1| Xenopus laevis HMBA-inducible, mRNA (cDNA clone MGC:115232 IMAGE:5084444), complete cds Length = 1898 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 777 acagtgtctatatataaatat 797 ||||||||||||||||||||| Sbjct: 1713 acagtgtctatatataaatat 1733
>gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complete sequence Length = 135598 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 650 tacagcaatagaagattgtga 670 ||||||||||||||||||||| Sbjct: 103548 tacagcaatagaagattgtga 103568
>gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, complete sequence Length = 169408 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 923 tgttcttctgcagcttctttgcctt 947 |||||||||||||||||||| |||| Sbjct: 29029 tgttcttctgcagcttctttacctt 29053
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gccgcgtcaagcccggcgacg 323 ||||||||||||||||||||| Sbjct: 2564536 gccgcgtcaagcccggcgacg 2564516
>ref|XM_954827.1| Neurospora crassa OR74A hypothetical protein (NCU02276.1) partial mRNA Length = 3519 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacgatcaa 451 ||||||||||| ||||||||||||| Sbjct: 414 cgacgacgaagacgacgacgatcaa 438
>gb|AF216664.1|AF216664 Drosophila melanogaster xmas-2 and xmas-1 genes, complete cds Length = 8735 Score = 42.1 bits (21), Expect = 4.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 775 aaacagtgtctatatataaatatat 799 |||||||||||||||||| |||||| Sbjct: 8039 aaacagtgtctatatatatatatat 8015
>dbj|AP002517.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-116P9, complete sequences Length = 173251 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 782 gtctatatataaatatattct 802 ||||||||||||||||||||| Sbjct: 943 gtctatatataaatatattct 923
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 129668 cgacgacgaaggcgacgacga 129688
>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130454 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 cgacgacgaaggcgacgacga 447 ||||||||||||||||||||| Sbjct: 19250 cgacgacgaaggcgacgacga 19270
>dbj|AP002512.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-3051L14, complete sequences Length = 175031 Score = 42.1 bits (21), Expect = 4.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 782 gtctatatataaatatattct 802 ||||||||||||||||||||| Sbjct: 113468 gtctatatataaatatattct 113448 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 204,624,068 Number of extensions: 10780347 Number of successful extensions: 291968 Number of sequences better than 10.0: 48 Number of HSP's gapped: 291968 Number of HSP's successfully gapped: 65 Length of query: 1176 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1153 Effective length of database: 18,503,978,556 Effective search space: 21335087275068 Effective search space used: 21335087275068 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)