| Clone Name | FLbaf35i07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001053628.1| Oryza sativa (japonica cultivar-group) Os02g0550300 (Os02g0550300) mRNA, complete cds Length = 1278 Score = 523 bits (264), Expect = e-145 Identities = 919/1134 (81%), Gaps = 10/1134 (0%) Strand = Plus / Plus Query: 183 gttccagatcccgcgagacgggagcgtcgtggaactagacgagagcaacttcgaggcggc 242 |||||||||||| || |||||||| || |||| || ||||| |||||||||| ||||| Sbjct: 117 gttccagatcccccgggacgggagggtgctggagctggacgacggcaacttcgacgcggc 176 Query: 243 gctggccgccgtcgatttcctcttcgtggacttccacgccccctggtgcggccactgcaa 302 | | ||||| || |||||||||| |||||| |||| || ||||||||||||||||| Sbjct: 177 ggttcgcgccgccggcctcctcttcgtcgacttctacgcgccatggtgcggccactgcaa 236 Query: 303 acgcctctccccgcagttggatgaagctgctccggttcttgctgggctgagcaccccaat 362 |||||| |||| ||||| ||||||||||||||||| || ||||| ||||||| || || Sbjct: 237 gcgcctcgcccctcagttagatgaagctgctccggtgctggctggattgagcacacccat 296 Query: 363 tgtagtcgcgaaagtaaatgcagagaagtacaaaaagcttgggtccaaatatggagtaga 422 ||||| || || || ||||| || || ||||||||||| || || |||||||||||||| Sbjct: 297 cgtagttgctaaggtgaatgccgacaaatacaaaaagctcggatcaaaatatggagtaga 356 Query: 423 tggcttccctactcttatgctttttgaccatggagtccccacagagtatactggttcaag 482 ||| ||||| ||||| ||||| |||||||| ||| ||| |||||||| ||||||||||| Sbjct: 357 tgggttccccactctgatgctctttgaccacggaaccccaacagagtacactggttcaag 416 Query: 483 gaaggccagccagctcgttgagagcctgaggaagcttgtcgcacctgatgtttctcttct 542 ||||||| ||||||||||| ||| | ||||||||| || |||||||||||| |||| Sbjct: 417 gaaggccgatttgctcgttgagaaccttaagaagcttgttgcgcctgatgtttctgttct 476 Query: 543 catgtccgatgcagcaatcaaaagttttgtccaggaagctggtgtgggttttccgttatt 602 | || || |||| |||||||| || || |||| ||||| |||||||||| || || Sbjct: 477 cgaatcggactcagcgatcaaaagcttcgttgaggatgctggcatgggttttccattgtt 536 Query: 603 tatcggatttggggtggatgaatcctccattgccgagtatggagcaaggtacaagaagaa 662 | |||| ||||||||||||||||||| |||| ||||||||||| | ||||||||| | Sbjct: 537 tctcgggtttggggtggatgaatccttgattgttgagtatggagcgaagtacaagaacag 596 Query: 663 ggcatggttttctacagcaaaggatttctctgaggatatgatggccgtgtatgattttga 722 ||| ||||||||| |||||||||||||||||| |||||||||| | | |||||||| || Sbjct: 597 ggcctggttttctgtagcaaaggatttctctgaagatatgatggtcttttatgatttcga 656 Query: 723 caagataccagcgttggtttcgctcaacccaaaataataacgagcagaatgttttttatg 782 |||| | || || |||||||| | |||||||| | || ||||||| |||| |||| Sbjct: 657 caaggtccctgcattggtttctgttaacccaaagt-atcgtgagcagagcattttctatg 715 Query: 783 gcccctt---tgaaggaaccttcttggaggattttatacggcaatccctgcttccgataa 839 |||| || ||| ||| |||||||||| |||||||||||| | ||||| || || || Sbjct: 716 gcccttttgatgatggagccttcttggaagattttatacggaattcccttctgcctttag 775 Query: 840 ctgtgcccttcaatgcagagactgtaaagatgttaaaagatgatgataggaaagtagtcc 899 ||||||| | || ||||||||| |||||||| || ||||||| ||||||||||| | Sbjct: 776 ttgtgcccatgaacagagagactgtcaagatgttgaatgatgatgggaggaaagtagttc 835 Query: 900 ttgcagttctgcag---gatgaatctgatgaaacttccatgcggttgataaaagttttaa 956 || || | ||| |||||||| ||||||| |||| ||| |||||||||| || | Sbjct: 836 ttatgattttacaggatgatgaatccgatgaaaattccccacggctgataaaagtattga 895 Query: 957 gatctgcagccaatgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatggg 1016 | |||||||||| |||||||| ||| ||||||||||| ||||| ||||||||||| |||| Sbjct: 896 ggtctgcagccagtgcaaaccgtgatctagtgtttggttatgtaggagtcaaccagtggg 955 Query: 1017 aggaattcaccgagcctttccatgattctaagagctcacagctgccaaagttggtagtct 1076 |||||||||| ||| |||| |||| |||||||||| ||||||||| | || |||||| Sbjct: 956 aggaattcactgagacttt---tgatgttaagagctcagagctgccaacgatgatagtct 1012 Query: 1077 gggacaaagatgaggagtatgaagtggttgagggtttggagagtttggaagaaggtgacc 1136 |||||||| | |||||||||||| | |||||||||| || || | |||||||||||| Sbjct: 1013 gggacaaaaaagaggagtatgaaatagttgagggttcagaaaggcttgaagaaggtgact 1072 Query: 1137 atggatcccaaattagtcgttttctcgaggcatatagagctggaagaacaataaagaaga 1196 |||| ||||| ||||| ||||| || |||| ||| || || ||||||||||||||||||| Sbjct: 1073 atgggtcccagattagccgtttccttgagggatacagggcaggaagaacaataaagaaga 1132 Query: 1197 cattgggcagacgttccccaacgctgcttggtatgaatgcgttgtacatcctcctcttct 1256 | ||||| || ||||| || ||||||||| |||||||| ||||||| ||| |||| Sbjct: 1133 aagtgggcgatcgatccccgaccctgcttggtgtgaatgcggtgtacattctcgtctttc 1192 Query: 1257 tggtggctgtgcttgttgttctgatgtttttctccgggcaaggcgacgaagatc 1310 |||| ||||| |||||| |||| |||| |||||| ||||||||||| ||||||| Sbjct: 1193 tggttgctgttcttgttcttctcatgtatttctctgggcaaggcgaggaagatc 1246
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 176 bits (89), Expect = 2e-40 Identities = 260/317 (82%) Strand = Plus / Plus Query: 427 ttccctactcttatgctttttgaccatggagtccccacagagtatactggttcaaggaag 486 ||||| ||||| ||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 20720697 ttccccactctgatgctctttgaccacggaaccccaacagagtacactggttcaaggaag 20720756 Query: 487 gccagccagctcgttgagagcctgaggaagcttgtcgcacctgatgtttctcttctcatg 546 ||| ||||||||||| ||| | ||||||||| || |||||||||||| ||||| Sbjct: 20720757 gccgatttgctcgttgagaaccttaagaagcttgttgcgcctgatgtttctgttctcgaa 20720816 Query: 547 tccgatgcagcaatcaaaagttttgtccaggaagctggtgtgggttttccgttatttatc 606 || || |||| |||||||| || || |||| ||||| |||||||||| || ||| || Sbjct: 20720817 tcggactcagcgatcaaaagcttcgttgaggatgctggcatgggttttccattgtttctc 20720876 Query: 607 ggatttggggtggatgaatcctccattgccgagtatggagcaaggtacaagaagaaggca 666 || ||||||||||||||||||| |||| ||||||||||| | ||||||||| | ||| Sbjct: 20720877 gggtttggggtggatgaatccttgattgttgagtatggagcgaagtacaagaacagggcc 20720936 Query: 667 tggttttctacagcaaaggatttctctgaggatatgatggccgtgtatgattttgacaag 726 ||||||||| |||||||||||||||||| |||||||||| | | |||||||| |||||| Sbjct: 20720937 tggttttctgtagcaaaggatttctctgaagatatgatggtcttttatgatttcgacaag 20720996 Query: 727 ataccagcgttggtttc 743 | || || |||||||| Sbjct: 20720997 gtccctgcattggtttc 20721013 Score = 147 bits (74), Expect = 1e-31 Identities = 252/310 (81%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 793 aggaaccttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaa 852 |||| |||||||||| |||||||||||| | ||||| || || || ||||||| | || Sbjct: 20721300 aggagccttcttggaagattttatacggaattcccttctgcctttagttgtgcccatgaa 20721359 Query: 853 tgcagagactgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgca 912 ||||||||| |||||||| || ||||||| ||||||||||| ||| || | || Sbjct: 20721360 cagagagactgtcaagatgttgaatgatgatgggaggaaagtagttcttatgattttaca 20721419 Query: 913 ggatga---atctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaa 969 |||||| ||| ||||||| |||| ||| |||||||||| || || |||||||||| Sbjct: 20721420 ggatgatgaatccgatgaaaattccccacggctgataaaagtattgaggtctgcagccag 20721479 Query: 970 tgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccga 1029 |||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||| || Sbjct: 20721480 tgcaaaccgtgatctagtgtttggttatgtaggagtcaaccagtgggaggaattcactga 20721539 Query: 1030 gcctttccatgattctaagagctcacagctgccaaagttggtagtctgggacaaagatga 1089 | |||| |||| |||||||||| ||||||||| | || |||||||||||||| | || Sbjct: 20721540 gacttt---tgatgttaagagctcagagctgccaacgatgatagtctgggacaaaaaaga 20721596 Query: 1090 ggagtatgaa 1099 |||||||||| Sbjct: 20721597 ggagtatgaa 20721606 Score = 125 bits (63), Expect = 5e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 1124 gaagaaggtgaccatggatcccaaattagtcgttttctcgaggcatatagagctggaaga 1183 |||||||||||| |||| ||||| ||||| ||||| || |||| ||| || || |||||| Sbjct: 20721874 gaagaaggtgactatgggtcccagattagccgtttccttgagggatacagggcaggaaga 20721933 Query: 1184 acaataaagaagacattgggcagacgttccccaacgctgcttggtatgaatgcgttgtac 1243 ||||||||||||| | ||||| || ||||| || ||||||||| |||||||| ||||| Sbjct: 20721934 acaataaagaagaaagtgggcgatcgatccccgaccctgcttggtgtgaatgcggtgtac 20721993 Query: 1244 atcctcctcttcttggtggctgtgcttgttgttctgatgtttttctccgggcaaggcgac 1303 || ||| |||| |||| ||||| |||||| |||| |||| |||||| ||||||||||| Sbjct: 20721994 attctcgtctttctggttgctgttcttgttcttctcatgtatttctctgggcaaggcgag 20722053 Query: 1304 gaagatc 1310 ||||||| Sbjct: 20722054 gaagatc 20722060 Score = 71.9 bits (36), Expect = 7e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 183 gttccagatcccgcgagacgggagcgtcgtggaactagacgagagcaacttcgaggcggc 242 |||||||||||| || |||||||| || |||| || ||||| |||||||||| ||||| Sbjct: 20719898 gttccagatcccccgggacgggagggtgctggagctggacgacggcaacttcgacgcggc 20719957 Query: 243 gctggccgccgtcgatttcctcttcgtggacttccacgccccctggtgcggccactgcaa 302 | | ||||| || |||||||||| |||||| |||| || ||||||||||||||||| Sbjct: 20719958 ggttcgcgccgccggcctcctcttcgtcgacttctacgcgccatggtgcggccactgcaa 20720017 Query: 303 acgcctctcccc 314 |||||| |||| Sbjct: 20720018 gcgcctcgcccc 20720029 Score = 71.9 bits (36), Expect = 7e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 315 gcagttggatgaagctgctccggttcttgctgggctgagcaccccaattgtagtcgcgaa 374 |||||| ||||||||||||||||| || ||||| ||||||| || || ||||| || || Sbjct: 20720498 gcagttagatgaagctgctccggtgctggctggattgagcacacccatcgtagttgctaa 20720557 Query: 375 agtaaatgcagagaagtacaaaaagcttgggtccaaatatggagtaga 422 || ||||| || || ||||||||||| || || |||||||||||||| Sbjct: 20720558 ggtgaatgccgacaaatacaaaaagctcggatcaaaatatggagtaga 20720605 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 caaggtacaagaagaaggcatg 668 |||||||||||||||||||||| Sbjct: 17580203 caaggtacaagaagaaggcatg 17580182
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 176 bits (89), Expect = 2e-40 Identities = 260/317 (82%) Strand = Plus / Plus Query: 427 ttccctactcttatgctttttgaccatggagtccccacagagtatactggttcaaggaag 486 ||||| ||||| ||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 71803 ttccccactctgatgctctttgaccacggaaccccaacagagtacactggttcaaggaag 71862 Query: 487 gccagccagctcgttgagagcctgaggaagcttgtcgcacctgatgtttctcttctcatg 546 ||| ||||||||||| ||| | ||||||||| || |||||||||||| ||||| Sbjct: 71863 gccgatttgctcgttgagaaccttaagaagcttgttgcgcctgatgtttctgttctcgaa 71922 Query: 547 tccgatgcagcaatcaaaagttttgtccaggaagctggtgtgggttttccgttatttatc 606 || || |||| |||||||| || || |||| ||||| |||||||||| || ||| || Sbjct: 71923 tcggactcagcgatcaaaagcttcgttgaggatgctggcatgggttttccattgtttctc 71982 Query: 607 ggatttggggtggatgaatcctccattgccgagtatggagcaaggtacaagaagaaggca 666 || ||||||||||||||||||| |||| ||||||||||| | ||||||||| | ||| Sbjct: 71983 gggtttggggtggatgaatccttgattgttgagtatggagcgaagtacaagaacagggcc 72042 Query: 667 tggttttctacagcaaaggatttctctgaggatatgatggccgtgtatgattttgacaag 726 ||||||||| |||||||||||||||||| |||||||||| | | |||||||| |||||| Sbjct: 72043 tggttttctgtagcaaaggatttctctgaagatatgatggtcttttatgatttcgacaag 72102 Query: 727 ataccagcgttggtttc 743 | || || |||||||| Sbjct: 72103 gtccctgcattggtttc 72119 Score = 147 bits (74), Expect = 1e-31 Identities = 252/310 (81%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 793 aggaaccttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaa 852 |||| |||||||||| |||||||||||| | ||||| || || || ||||||| | || Sbjct: 72406 aggagccttcttggaagattttatacggaattcccttctgcctttagttgtgcccatgaa 72465 Query: 853 tgcagagactgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgca 912 ||||||||| |||||||| || ||||||| ||||||||||| ||| || | || Sbjct: 72466 cagagagactgtcaagatgttgaatgatgatgggaggaaagtagttcttatgattttaca 72525 Query: 913 ggatga---atctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaa 969 |||||| ||| ||||||| |||| ||| |||||||||| || || |||||||||| Sbjct: 72526 ggatgatgaatccgatgaaaattccccacggctgataaaagtattgaggtctgcagccag 72585 Query: 970 tgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccga 1029 |||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||| || Sbjct: 72586 tgcaaaccgtgatctagtgtttggttatgtaggagtcaaccagtgggaggaattcactga 72645 Query: 1030 gcctttccatgattctaagagctcacagctgccaaagttggtagtctgggacaaagatga 1089 | |||| |||| |||||||||| ||||||||| | || |||||||||||||| | || Sbjct: 72646 gacttt---tgatgttaagagctcagagctgccaacgatgatagtctgggacaaaaaaga 72702 Query: 1090 ggagtatgaa 1099 |||||||||| Sbjct: 72703 ggagtatgaa 72712 Score = 125 bits (63), Expect = 5e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 1124 gaagaaggtgaccatggatcccaaattagtcgttttctcgaggcatatagagctggaaga 1183 |||||||||||| |||| ||||| ||||| ||||| || |||| ||| || || |||||| Sbjct: 72980 gaagaaggtgactatgggtcccagattagccgtttccttgagggatacagggcaggaaga 73039 Query: 1184 acaataaagaagacattgggcagacgttccccaacgctgcttggtatgaatgcgttgtac 1243 ||||||||||||| | ||||| || ||||| || ||||||||| |||||||| ||||| Sbjct: 73040 acaataaagaagaaagtgggcgatcgatccccgaccctgcttggtgtgaatgcggtgtac 73099 Query: 1244 atcctcctcttcttggtggctgtgcttgttgttctgatgtttttctccgggcaaggcgac 1303 || ||| |||| |||| ||||| |||||| |||| |||| |||||| ||||||||||| Sbjct: 73100 attctcgtctttctggttgctgttcttgttcttctcatgtatttctctgggcaaggcgag 73159 Query: 1304 gaagatc 1310 ||||||| Sbjct: 73160 gaagatc 73166 Score = 71.9 bits (36), Expect = 7e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 183 gttccagatcccgcgagacgggagcgtcgtggaactagacgagagcaacttcgaggcggc 242 |||||||||||| || |||||||| || |||| || ||||| |||||||||| ||||| Sbjct: 71004 gttccagatcccccgggacgggagggtgctggagctggacgacggcaacttcgacgcggc 71063 Query: 243 gctggccgccgtcgatttcctcttcgtggacttccacgccccctggtgcggccactgcaa 302 | | ||||| || |||||||||| |||||| |||| || ||||||||||||||||| Sbjct: 71064 ggttcgcgccgccggcctcctcttcgtcgacttctacgcgccatggtgcggccactgcaa 71123 Query: 303 acgcctctcccc 314 |||||| |||| Sbjct: 71124 gcgcctcgcccc 71135 Score = 71.9 bits (36), Expect = 7e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 315 gcagttggatgaagctgctccggttcttgctgggctgagcaccccaattgtagtcgcgaa 374 |||||| ||||||||||||||||| || ||||| ||||||| || || ||||| || || Sbjct: 71604 gcagttagatgaagctgctccggtgctggctggattgagcacacccatcgtagttgctaa 71663 Query: 375 agtaaatgcagagaagtacaaaaagcttgggtccaaatatggagtaga 422 || ||||| || || ||||||||||| || || |||||||||||||| Sbjct: 71664 ggtgaatgccgacaaatacaaaaagctcggatcaaaatatggagtaga 71711
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 176 bits (89), Expect = 2e-40 Identities = 260/317 (82%) Strand = Plus / Plus Query: 427 ttccctactcttatgctttttgaccatggagtccccacagagtatactggttcaaggaag 486 ||||| ||||| ||||| |||||||| ||| ||| |||||||| ||||||||||||||| Sbjct: 117552 ttccccactctgatgctctttgaccacggaaccccaacagagtacactggttcaaggaag 117611 Query: 487 gccagccagctcgttgagagcctgaggaagcttgtcgcacctgatgtttctcttctcatg 546 ||| ||||||||||| ||| | ||||||||| || |||||||||||| ||||| Sbjct: 117612 gccgatttgctcgttgagaaccttaagaagcttgttgcgcctgatgtttctgttctcgaa 117671 Query: 547 tccgatgcagcaatcaaaagttttgtccaggaagctggtgtgggttttccgttatttatc 606 || || |||| |||||||| || || |||| ||||| |||||||||| || ||| || Sbjct: 117672 tcggactcagcgatcaaaagcttcgttgaggatgctggcatgggttttccattgtttctc 117731 Query: 607 ggatttggggtggatgaatcctccattgccgagtatggagcaaggtacaagaagaaggca 666 || ||||||||||||||||||| |||| ||||||||||| | ||||||||| | ||| Sbjct: 117732 gggtttggggtggatgaatccttgattgttgagtatggagcgaagtacaagaacagggcc 117791 Query: 667 tggttttctacagcaaaggatttctctgaggatatgatggccgtgtatgattttgacaag 726 ||||||||| |||||||||||||||||| |||||||||| | | |||||||| |||||| Sbjct: 117792 tggttttctgtagcaaaggatttctctgaagatatgatggtcttttatgatttcgacaag 117851 Query: 727 ataccagcgttggtttc 743 | || || |||||||| Sbjct: 117852 gtccctgcattggtttc 117868 Score = 147 bits (74), Expect = 1e-31 Identities = 252/310 (81%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 793 aggaaccttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaa 852 |||| |||||||||| |||||||||||| | ||||| || || || ||||||| | || Sbjct: 118155 aggagccttcttggaagattttatacggaattcccttctgcctttagttgtgcccatgaa 118214 Query: 853 tgcagagactgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgca 912 ||||||||| |||||||| || ||||||| ||||||||||| ||| || | || Sbjct: 118215 cagagagactgtcaagatgttgaatgatgatgggaggaaagtagttcttatgattttaca 118274 Query: 913 ggatga---atctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaa 969 |||||| ||| ||||||| |||| ||| |||||||||| || || |||||||||| Sbjct: 118275 ggatgatgaatccgatgaaaattccccacggctgataaaagtattgaggtctgcagccag 118334 Query: 970 tgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccga 1029 |||||||| ||| ||||||||||| ||||| ||||||||||| |||||||||||||| || Sbjct: 118335 tgcaaaccgtgatctagtgtttggttatgtaggagtcaaccagtgggaggaattcactga 118394 Query: 1030 gcctttccatgattctaagagctcacagctgccaaagttggtagtctgggacaaagatga 1089 | |||| |||| |||||||||| ||||||||| | || |||||||||||||| | || Sbjct: 118395 gacttt---tgatgttaagagctcagagctgccaacgatgatagtctgggacaaaaaaga 118451 Query: 1090 ggagtatgaa 1099 |||||||||| Sbjct: 118452 ggagtatgaa 118461 Score = 125 bits (63), Expect = 5e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 1124 gaagaaggtgaccatggatcccaaattagtcgttttctcgaggcatatagagctggaaga 1183 |||||||||||| |||| ||||| ||||| ||||| || |||| ||| || || |||||| Sbjct: 118729 gaagaaggtgactatgggtcccagattagccgtttccttgagggatacagggcaggaaga 118788 Query: 1184 acaataaagaagacattgggcagacgttccccaacgctgcttggtatgaatgcgttgtac 1243 ||||||||||||| | ||||| || ||||| || ||||||||| |||||||| ||||| Sbjct: 118789 acaataaagaagaaagtgggcgatcgatccccgaccctgcttggtgtgaatgcggtgtac 118848 Query: 1244 atcctcctcttcttggtggctgtgcttgttgttctgatgtttttctccgggcaaggcgac 1303 || ||| |||| |||| ||||| |||||| |||| |||| |||||| ||||||||||| Sbjct: 118849 attctcgtctttctggttgctgttcttgttcttctcatgtatttctctgggcaaggcgag 118908 Query: 1304 gaagatc 1310 ||||||| Sbjct: 118909 gaagatc 118915 Score = 71.9 bits (36), Expect = 7e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 183 gttccagatcccgcgagacgggagcgtcgtggaactagacgagagcaacttcgaggcggc 242 |||||||||||| || |||||||| || |||| || ||||| |||||||||| ||||| Sbjct: 116753 gttccagatcccccgggacgggagggtgctggagctggacgacggcaacttcgacgcggc 116812 Query: 243 gctggccgccgtcgatttcctcttcgtggacttccacgccccctggtgcggccactgcaa 302 | | ||||| || |||||||||| |||||| |||| || ||||||||||||||||| Sbjct: 116813 ggttcgcgccgccggcctcctcttcgtcgacttctacgcgccatggtgcggccactgcaa 116872 Query: 303 acgcctctcccc 314 |||||| |||| Sbjct: 116873 gcgcctcgcccc 116884 Score = 71.9 bits (36), Expect = 7e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 315 gcagttggatgaagctgctccggttcttgctgggctgagcaccccaattgtagtcgcgaa 374 |||||| ||||||||||||||||| || ||||| ||||||| || || ||||| || || Sbjct: 117353 gcagttagatgaagctgctccggtgctggctggattgagcacacccatcgtagttgctaa 117412 Query: 375 agtaaatgcagagaagtacaaaaagcttgggtccaaatatggagtaga 422 || ||||| || || ||||||||||| || || |||||||||||||| Sbjct: 117413 ggtgaatgccgacaaatacaaaaagctcggatcaaaatatggagtaga 117460
>ref|NM_001059366.1| Oryza sativa (japonica cultivar-group) Os04g0432500 (Os04g0432500) mRNA, complete cds Length = 1565 Score = 168 bits (85), Expect = 4e-38 Identities = 268/329 (81%) Strand = Plus / Plus Query: 776 ttttatggcccctttgaaggaaccttcttggaggattttatacggcaatccctgcttccg 835 ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 757 ttttatggcccatttgaaggaagtttcttggaagattttatacggcaatccctgcttcct 816 Query: 836 ataactgtgcccttcaatgcagagactgtaaagatgttaaaagatgatgataggaaagta 895 | ||||| ||| |||| ||||||| | || ||||| | |||||||| || ||||| Sbjct: 817 ttgactgtccccatcaacacagagacactcaaaatgttggatgatgatgacagaaaagtt 876 Query: 896 gtccttgcagttctgcaggatgaatctgatgaaacttccatgcggttgataaaagtttta 955 || |||||| || || ||||||| || ||||||||||| | |||| |||||||||| Sbjct: 877 gttcttgcaattttggaggatgattcagatgaaacttcttcacagttggtaaaagttttg 936 Query: 956 agatctgcagccaatgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatgg 1015 || ||||| ||||||||||||| |||| | |||||||| ||||| ||| |||| |||||| Sbjct: 937 aggtctgctgccaatgcaaaccgtgacttggtgtttgggtatgtcggaatcaaacaatgg 996 Query: 1016 gaggaattcaccgagcctttccatgattctaagagctcacagctgccaaagttggtagtc 1075 || || || |||| |||| || ||| ||||||||||||||||||||| | | ||| Sbjct: 997 gatgagtttgtcgagacttttgatatttccaagagctcacagctgccaaagctaatcgtc 1056 Query: 1076 tgggacaaagatgaggagtatgaagtggt 1104 ||||| | | ||||||||||||||||||| Sbjct: 1057 tgggatagaaatgaggagtatgaagtggt 1085 Score = 141 bits (71), Expect = 9e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||| ||||||||||||||||| |||| |||| | ||||||||| |||||| || Sbjct: 202 gacgagagcagcttcgaggcggcgctgggcgccatcgactacctcttcgtcgacttctac 261 Query: 280 gccccctggtgcggccactgcaaacgcctctccccgcagttggatgaagctgctccggtt 339 || || ||||||||||||||||| |||||| |||| |||| ||||||||||| ||||| Sbjct: 262 gcgccatggtgcggccactgcaagcgcctcgcccccgagttagatgaagctgcaccggtg 321 Query: 340 cttgctgggctgagcaccccaattgtagtcgcgaaagtaaatgcagagaagtacaaaaag 399 | || || ||||| || || |||| || ||||||||||| || ||||||| ||| Sbjct: 322 ttggcaggactgagtgagcccatcatagttgccaaagtaaatgctgacaagtacaggaag 381 Query: 400 cttgggtccaaatatggagtagatggcttccctactcttatgctttttgaccatggagtc 459 ||||| || ||||||||||| || || |||||||| || ||||||||| ||| || ||| Sbjct: 382 cttggatcgaaatatggagtggacgggttccctacactgatgctttttatccacggggtc 441 Query: 460 cccacagagtatactggttcaag 482 |||| || || ||||||||||| Sbjct: 442 cccatcgaatacactggttcaag 464
>dbj|AK069367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012O03, full insert sequence Length = 1645 Score = 168 bits (85), Expect = 4e-38 Identities = 268/329 (81%) Strand = Plus / Plus Query: 776 ttttatggcccctttgaaggaaccttcttggaggattttatacggcaatccctgcttccg 835 ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 758 ttttatggcccatttgaaggaagtttcttggaagattttatacggcaatccctgcttcct 817 Query: 836 ataactgtgcccttcaatgcagagactgtaaagatgttaaaagatgatgataggaaagta 895 | ||||| ||| |||| ||||||| | || ||||| | |||||||| || ||||| Sbjct: 818 ttgactgtccccatcaacacagagacactcaaaatgttggatgatgatgacagaaaagtt 877 Query: 896 gtccttgcagttctgcaggatgaatctgatgaaacttccatgcggttgataaaagtttta 955 || |||||| || || ||||||| || ||||||||||| | |||| |||||||||| Sbjct: 878 gttcttgcaattttggaggatgattcagatgaaacttcttcacagttggtaaaagttttg 937 Query: 956 agatctgcagccaatgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatgg 1015 || ||||| ||||||||||||| |||| | |||||||| ||||| ||| |||| |||||| Sbjct: 938 aggtctgctgccaatgcaaaccgtgacttggtgtttgggtatgtcggaatcaaacaatgg 997 Query: 1016 gaggaattcaccgagcctttccatgattctaagagctcacagctgccaaagttggtagtc 1075 || || || |||| |||| || ||| ||||||||||||||||||||| | | ||| Sbjct: 998 gatgagtttgtcgagacttttgatatttccaagagctcacagctgccaaagctaatcgtc 1057 Query: 1076 tgggacaaagatgaggagtatgaagtggt 1104 ||||| | | ||||||||||||||||||| Sbjct: 1058 tgggatagaaatgaggagtatgaagtggt 1086 Score = 141 bits (71), Expect = 9e-30 Identities = 215/263 (81%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||| ||||||||||||||||| |||| |||| | ||||||||| |||||| || Sbjct: 203 gacgagagcagcttcgaggcggcgctgggcgccatcgactacctcttcgtcgacttctac 262 Query: 280 gccccctggtgcggccactgcaaacgcctctccccgcagttggatgaagctgctccggtt 339 || || ||||||||||||||||| |||||| |||| |||| ||||||||||| ||||| Sbjct: 263 gcgccatggtgcggccactgcaagcgcctcgcccccgagttagatgaagctgcaccggtg 322 Query: 340 cttgctgggctgagcaccccaattgtagtcgcgaaagtaaatgcagagaagtacaaaaag 399 | || || ||||| || || |||| || ||||||||||| || ||||||| ||| Sbjct: 323 ttggcaggactgagtgagcccatcatagttgccaaagtaaatgctgacaagtacaggaag 382 Query: 400 cttgggtccaaatatggagtagatggcttccctactcttatgctttttgaccatggagtc 459 ||||| || ||||||||||| || || |||||||| || ||||||||| ||| || ||| Sbjct: 383 cttggatcgaaatatggagtggacgggttccctacactgatgctttttatccacggggtc 442 Query: 460 cccacagagtatactggttcaag 482 |||| || || ||||||||||| Sbjct: 443 cccatcgaatacactggttcaag 465
>emb|CR855172.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315E07, complete sequence Length = 80854 Score = 145 bits (73), Expect = 6e-31 Identities = 247/305 (80%) Strand = Plus / Minus Query: 800 ttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaatgcagag 859 |||||||| |||||||||||||||||||||||||| | ||||| ||| |||| ||||| Sbjct: 1499 ttcttggaagattttatacggcaatccctgcttcctttgactgtccccatcaacacagag 1440 Query: 860 actgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgcaggatgaa 919 || | || ||||| | |||||||| || ||||| || |||||| || || ||||||| Sbjct: 1439 acactcaaaatgttggatgatgatgacagaaaagttgttcttgcaattttggaggatgat 1380 Query: 920 tctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaatgcaaaccat 979 || ||||||||||| | |||| |||||||||| || ||||| ||||||||||||| | Sbjct: 1379 tcagatgaaacttcttcacagttggtaaaagttttgaggtctgctgccaatgcaaaccgt 1320 Query: 980 gacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccgagcctttccat 1039 ||| | |||||||| ||||| ||| |||| |||||||| || || |||| |||| || Sbjct: 1319 gacttggtgtttgggtatgtcggaatcaaacaatgggatgagtttgtcgagacttttgat 1260 Query: 1040 gattctaagagctcacagctgccaaagttggtagtctgggacaaagatgaggagtatgaa 1099 ||| ||||||||||||||||||||| | | |||||||| | | |||||||||||||| Sbjct: 1259 atttccaagagctcacagctgccaaagctaatcgtctgggatagaaatgaggagtatgaa 1200 Query: 1100 gtggt 1104 ||||| Sbjct: 1199 gtggt 1195 Score = 101 bits (51), Expect = 7e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||| ||||||||||||||||| |||| |||| | ||||||||| |||||| || Sbjct: 3054 gacgagagcagcttcgaggcggcgctgggcgccatcgactacctcttcgtcgacttctac 2995 Query: 280 gccccctggtgcggccactgcaaacgcctctcccc 314 || || ||||||||||||||||| |||||| |||| Sbjct: 2994 gcgccatggtgcggccactgcaagcgcctcgcccc 2960 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Minus Query: 373 aaagtaaatgcagagaagtacaaaaagcttgggtccaaatatggagt 419 ||||||||||| || ||||||| |||||||| || ||||||||||| Sbjct: 2246 aaagtaaatgctgacaagtacaggaagcttggatcgaaatatggagt 2200
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 145 bits (73), Expect = 6e-31 Identities = 247/305 (80%) Strand = Plus / Minus Query: 800 ttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaatgcagag 859 |||||||| |||||||||||||||||||||||||| | ||||| ||| |||| ||||| Sbjct: 121379 ttcttggaagattttatacggcaatccctgcttcctttgactgtccccatcaacacagag 121320 Query: 860 actgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgcaggatgaa 919 || | || ||||| | |||||||| || ||||| || |||||| || || ||||||| Sbjct: 121319 acactcaaaatgttggatgatgatgacagaaaagttgttcttgcaattttggaggatgat 121260 Query: 920 tctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaatgcaaaccat 979 || ||||||||||| | |||| |||||||||| || ||||| ||||||||||||| | Sbjct: 121259 tcagatgaaacttcttcacagttggtaaaagttttgaggtctgctgccaatgcaaaccgt 121200 Query: 980 gacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccgagcctttccat 1039 ||| | |||||||| ||||| ||| |||| |||||||| || || |||| |||| || Sbjct: 121199 gacttggtgtttgggtatgtcggaatcaaacaatgggatgagtttgtcgagacttttgat 121140 Query: 1040 gattctaagagctcacagctgccaaagttggtagtctgggacaaagatgaggagtatgaa 1099 ||| ||||||||||||||||||||| | | |||||||| | | |||||||||||||| Sbjct: 121139 atttccaagagctcacagctgccaaagctaatcgtctgggatagaaatgaggagtatgaa 121080 Query: 1100 gtggt 1104 ||||| Sbjct: 121079 gtggt 121075 Score = 101 bits (51), Expect = 7e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||| ||||||||||||||||| |||| |||| | ||||||||| |||||| || Sbjct: 122934 gacgagagcagcttcgaggcggcgctgggcgccatcgactacctcttcgtcgacttctac 122875 Query: 280 gccccctggtgcggccactgcaaacgcctctcccc 314 || || ||||||||||||||||| |||||| |||| Sbjct: 122874 gcgccatggtgcggccactgcaagcgcctcgcccc 122840 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Minus Query: 373 aaagtaaatgcagagaagtacaaaaagcttgggtccaaatatggagt 419 ||||||||||| || ||||||| |||||||| || ||||||||||| Sbjct: 122126 aaagtaaatgctgacaagtacaggaagcttggatcgaaatatggagt 122080
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 145 bits (73), Expect = 6e-31 Identities = 247/305 (80%) Strand = Plus / Minus Query: 800 ttcttggaggattttatacggcaatccctgcttccgataactgtgcccttcaatgcagag 859 |||||||| |||||||||||||||||||||||||| | ||||| ||| |||| ||||| Sbjct: 21471629 ttcttggaagattttatacggcaatccctgcttcctttgactgtccccatcaacacagag 21471570 Query: 860 actgtaaagatgttaaaagatgatgataggaaagtagtccttgcagttctgcaggatgaa 919 || | || ||||| | |||||||| || ||||| || |||||| || || ||||||| Sbjct: 21471569 acactcaaaatgttggatgatgatgacagaaaagttgttcttgcaattttggaggatgat 21471510 Query: 920 tctgatgaaacttccatgcggttgataaaagttttaagatctgcagccaatgcaaaccat 979 || ||||||||||| | |||| |||||||||| || ||||| ||||||||||||| | Sbjct: 21471509 tcagatgaaacttcttcacagttggtaaaagttttgaggtctgctgccaatgcaaaccgt 21471450 Query: 980 gacctagtgtttggatatgtgggagtcaaccaatgggaggaattcaccgagcctttccat 1039 ||| | |||||||| ||||| ||| |||| |||||||| || || |||| |||| || Sbjct: 21471449 gacttggtgtttgggtatgtcggaatcaaacaatgggatgagtttgtcgagacttttgat 21471390 Query: 1040 gattctaagagctcacagctgccaaagttggtagtctgggacaaagatgaggagtatgaa 1099 ||| ||||||||||||||||||||| | | |||||||| | | |||||||||||||| Sbjct: 21471389 atttccaagagctcacagctgccaaagctaatcgtctgggatagaaatgaggagtatgaa 21471330 Query: 1100 gtggt 1104 ||||| Sbjct: 21471329 gtggt 21471325 Score = 101 bits (51), Expect = 7e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||| ||||||||||||||||| |||| |||| | ||||||||| |||||| || Sbjct: 21473184 gacgagagcagcttcgaggcggcgctgggcgccatcgactacctcttcgtcgacttctac 21473125 Query: 280 gccccctggtgcggccactgcaaacgcctctcccc 314 || || ||||||||||||||||| |||||| |||| Sbjct: 21473124 gcgccatggtgcggccactgcaagcgcctcgcccc 21473090 Score = 46.1 bits (23), Expect = 0.38 Identities = 41/47 (87%) Strand = Plus / Minus Query: 373 aaagtaaatgcagagaagtacaaaaagcttgggtccaaatatggagt 419 ||||||||||| || ||||||| |||||||| || ||||||||||| Sbjct: 21472376 aaagtaaatgctgacaagtacaggaagcttggatcgaaatatggagt 21472330
>gb|BT017122.1| Zea mays clone EL01N0364F07.c mRNA sequence Length = 1668 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||||||||||||||||||||| || | |||| ||||||||||| || ||| || Sbjct: 201 gacgagagcaacttcgaggcggcgctgggcgtcatcgacttcctcttcgtcgatttctac 260 Query: 280 gccccctggtgcggccactgcaaacgcct 308 || || ||||||||||||||||| ||||| Sbjct: 261 gcgccatggtgcggccactgcaagcgcct 289
>gb|AY739293.1| Zea mays protein disulfide isomerase (PDIL5-3) mRNA, complete cds Length = 1702 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 |||||||||||||||||||||||||||| || | |||| ||||||||||| || ||| || Sbjct: 170 gacgagagcaacttcgaggcggcgctgggcgtcatcgacttcctcttcgtcgatttctac 229 Query: 280 gccccctggtgcggccactgcaaacgcct 308 || || ||||||||||||||||| ||||| Sbjct: 230 gcgccatggtgcggccactgcaagcgcct 258
>gb|AY107259.1| Zea mays PCO103226 mRNA sequence Length = 1692 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 ||||| ||||| |||||||||||||||| |||| |||| || |||||||| |||||| || Sbjct: 170 gacgacagcaatttcgaggcggcgctgggcgccatcgactttctcttcgtcgacttctac 229 Query: 280 gccccctggtgcggccactgcaa 302 ||||| ||||||||||||||||| Sbjct: 230 gccccttggtgcggccactgcaa 252 Score = 79.8 bits (40), Expect = 3e-11 Identities = 190/240 (79%) Strand = Plus / Plus Query: 957 gatctgcagccaatgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatggg 1016 ||||||| || |||||||||| ||| | |||||||||||||| ||| |||| ||||||| Sbjct: 906 gatctgctgctaatgcaaaccgtgatttggtgtttggatatgttggaatcaagcaatggg 965 Query: 1017 aggaattcaccgagcctttccatgattctaagagctcacagctgccaaagttggtagtct 1076 | | || ||| |||| ||| ||| ||||||||||||||||||||| | | || | Sbjct: 966 atgggtttgtggagacttttgatgtttccaagagctcacagctgccaaagctacttgtgt 1025 Query: 1077 gggacaaagatgaggagtatgaagtggttgagggtttggagagtttggaagaaggtgacc 1136 |||| | ||||||||||||||| | || || |||| ||||| || ||||||||||||| Sbjct: 1026 gggatagagatgaggagtatgagctagtggatggttcagagagattagaagaaggtgacc 1085 Query: 1137 atggatcccaaattagtcgttttctcgaggcatatagagctggaagaacaataaagaaga 1196 | | ||| ||||| || | || || |||| ||| ||||| |||||||||| |||||||| Sbjct: 1086 aagcatctcaaataagccaattccttgagggatacagagcaggaagaacaacaaagaaga 1145 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 779 tatggcccctttgaaggaaccttcttggaggattttatacggcaatccct 828 |||||||| ||||||| || ||||| || |||||| ||||||||||||| Sbjct: 728 tatggcccatttgaagaaaatttcttagaagattttgtacggcaatccct 777
>gb|AY739292.1| Zea mays protein disulfide isomerase (PDIL5-2) mRNA, complete cds Length = 1692 Score = 93.7 bits (47), Expect = 2e-15 Identities = 74/83 (89%) Strand = Plus / Plus Query: 220 gacgagagcaacttcgaggcggcgctggccgccgtcgatttcctcttcgtggacttccac 279 ||||| ||||| |||||||||||||||| |||| |||| || |||||||| |||||| || Sbjct: 170 gacgacagcaatttcgaggcggcgctgggcgccatcgactttctcttcgtcgacttctac 229 Query: 280 gccccctggtgcggccactgcaa 302 ||||| ||||||||||||||||| Sbjct: 230 gccccttggtgcggccactgcaa 252 Score = 79.8 bits (40), Expect = 3e-11 Identities = 190/240 (79%) Strand = Plus / Plus Query: 957 gatctgcagccaatgcaaaccatgacctagtgtttggatatgtgggagtcaaccaatggg 1016 ||||||| || |||||||||| ||| | |||||||||||||| ||| |||| ||||||| Sbjct: 906 gatctgctgctaatgcaaaccgtgatttggtgtttggatatgttggaatcaagcaatggg 965 Query: 1017 aggaattcaccgagcctttccatgattctaagagctcacagctgccaaagttggtagtct 1076 | | || ||| |||| ||| ||| ||||||||||||||||||||| | | || | Sbjct: 966 atgggtttgtggagacttttgatgtttccaagagctcacagctgccaaagctacttgtgt 1025 Query: 1077 gggacaaagatgaggagtatgaagtggttgagggtttggagagtttggaagaaggtgacc 1136 |||| | ||||||||||||||| | || || |||| ||||| || ||||||||||||| Sbjct: 1026 gggatagagatgaggagtatgagctagtggatggttcagagagattagaagaaggtgacc 1085 Query: 1137 atggatcccaaattagtcgttttctcgaggcatatagagctggaagaacaataaagaaga 1196 | | ||| ||||| || | || || |||| ||| ||||| |||||||||| |||||||| Sbjct: 1086 aagcatctcaaataagccaattccttgagggatacagagcaggaagaacaacaaagaaga 1145 Score = 44.1 bits (22), Expect = 1.5 Identities = 43/50 (86%) Strand = Plus / Plus Query: 779 tatggcccctttgaaggaaccttcttggaggattttatacggcaatccct 828 |||||||| ||||||| || ||||| || |||||| ||||||||||||| Sbjct: 728 tatggcccatttgaagaaaatttcttagaagattttgtacggcaatccct 777
>dbj|AK058722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E10, full insert sequence Length = 596 Score = 61.9 bits (31), Expect = 6e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1046 aagagctcacagctgccaaagttggtagtctgggacaaagatgaggagtatgaagtggt 1104 ||||||||||||||||||||| | | |||||||| | | ||||||||||||||||||| Sbjct: 54 aagagctcacagctgccaaagctaatcgtctgggatagaaatgaggagtatgaagtggt 112
>gb|J05602.1|RABTHBP Rabbit multifunctional thyroid hormone binding protein mRNA, complete cds Length = 2672 Score = 56.0 bits (28), Expect = 4e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 263 tcttcgtggacttccacgccccctggtgcggccactgcaa 302 |||||||||| ||| |||| |||||||||||||||||||| Sbjct: 1245 tcttcgtggagttctacgcgccctggtgcggccactgcaa 1284
>ref|NM_165849.1| Drosophila melanogaster ERp60 CG8983-RA, transcript variant A (ERp60), mRNA Length = 1848 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||||||||||||||||||||| Sbjct: 336 acgccccctggtgcggccactgcaa 360 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1365 acgccccatggtgcggccactgcaa 1389
>gb|DQ062786.1| Drosophila melanogaster Erp60 (CG8983) mRNA, partial cds Length = 1467 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||||||||||||||||||||| Sbjct: 140 acgccccctggtgcggccactgcaa 164 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1169 acgccccatggtgcggccactgcaa 1193
>gb|AF036939.1|AF036939 Chlamydomonas reinhardtii protein disulfide isomerase mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2429 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||||||||||||||||||||| Sbjct: 1270 acgccccctggtgcggccactgcaa 1294
>gb|AF027727.1|AF027727 Chlamydomonas reinhardtii protein disulfide isomerase RB60 (PDI) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2413 Score = 50.1 bits (25), Expect = 0.025 Identities = 25/25 (100%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||||||||||||||||||||| Sbjct: 1271 acgccccctggtgcggccactgcaa 1295
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 48.1 bits (24), Expect = 0.097 Identities = 24/24 (100%) Strand = Plus / Plus Query: 234 cgaggcggcgctggccgccgtcga 257 |||||||||||||||||||||||| Sbjct: 1785247 cgaggcggcgctggccgccgtcga 1785270 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gacgccggcctgcttggcgag 161 ||||||||||||||||||||| Sbjct: 6794279 gacgccggcctgcttggcgag 6794299
>ref|XM_540488.2| PREDICTED: Canis familiaris similar to prolyl 4-hydroxylase, beta subunit (LOC483369), mRNA Length = 2410 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 268 gtggacttccacgccccctggtgcggccactgcaa 302 ||||| ||| ||||||| ||||||||||||||||| Sbjct: 184 gtggagttctacgccccttggtgcggccactgcaa 218
>gb|DQ062787.1| Drosophila simulans Erp60 (CG8983) mRNA, partial cds Length = 1467 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 280 gccccctggtgcggccactgcaa 302 ||||||||||||||||||||||| Sbjct: 142 gccccctggtgcggccactgcaa 164 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1169 acgccccatggtgcggccactgcaa 1193
>ref|XM_959263.1| Neurospora crassa OR74A hypothetical protein (NCU00813.1) partial mRNA Length = 1515 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgc 300 ||||||||||||||||||||||| Sbjct: 164 acgccccctggtgcggccactgc 186
>ref|NM_174135.3| Bos taurus procollagen-proline, 2-oxoglutarate 4-dioxygenase (P4HB), mRNA Length = 2375 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 268 gtggacttccacgccccctggtgcggccactgcaa 302 ||||| ||| ||||||| ||||||||||||||||| Sbjct: 147 gtggagttctacgccccatggtgcggccactgcaa 181
>emb|X05130.1|HSPRO4HY Human mRNA for prolyl 4-hydoxylase beta subunit (EC 1.14.11.2) (procollagen-L-proline, 2-oxoglutarate:oxygen oxidoreductase, 4-hydroxylating) Length = 1956 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 268 gtggacttccacgccccctggtgcggccactgcaa 302 ||||| ||||| ||||||||||| ||||||||||| Sbjct: 165 gtggagttccatgccccctggtgtggccactgcaa 199
>gb|M17596.1|BOVPDI Bovine protein disulfide isomerase (PDI) mRNA, complete cds Length = 2758 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 268 gtggacttccacgccccctggtgcggccactgcaa 302 ||||| ||| ||||||| ||||||||||||||||| Sbjct: 530 gtggagttctacgccccatggtgcggccactgcaa 564
>gb|AC080023.6| Homo sapiens chromosome 11, clone RP11-351I24, complete sequence Length = 189886 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1107 agggtttggagagtttggaaga 1128 |||||||||||||||||||||| Sbjct: 130497 agggtttggagagtttggaaga 130518
>ref|XM_741746.1| Aspergillus fumigatus Af293 peptide transporter MTD1 (Afu7g00910) partial mRNA Length = 2274 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 115 cttgtcctcttcgttctcgccttctt 140 |||| ||||||||||||||||||||| Sbjct: 1375 cttgccctcttcgttctcgccttctt 1400
>emb|CR648726.1|CNS0EZJ0 Tetraodon nigroviridis full-length cDNA Length = 1923 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 283 ccctggtgcggccactgcaaac 304 |||||||||||||||||||||| Sbjct: 284 ccctggtgcggccactgcaaac 305 Score = 42.1 bits (21), Expect = 6.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 268 gtggacttccacgccccctggtgcggccactgcaaacgcct 308 ||||| ||| ||||||| ||||| || |||||||||||||| Sbjct: 413 gtggagttctacgccccatggtgtggacactgcaaacgcct 453 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 1470 acgcgccctggtgcggccactgcaa 1494
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 647 caaggtacaagaagaaggcatg 668 |||||||||||||||||||||| Sbjct: 50121 caaggtacaagaagaaggcatg 50100
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 ggcggcgctggccgccgtcga 257 ||||||||||||||||||||| Sbjct: 3634534 ggcggcgctggccgccgtcga 3634514
>ref|NM_011032.2| Mus musculus prolyl 4-hydroxylase, beta polypeptide (P4hb), mRNA Length = 2538 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 227 agagcaacttcgaggaggcgctggc 251
>gb|CP000454.1| Arthrobacter sp. FB24, complete genome Length = 4698945 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ggcctgcttggcgagtggcgg 167 ||||||||||||||||||||| Sbjct: 4692131 ggcctgcttggcgagtggcgg 4692111
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 7775551 acgccccatggtgcggccactgcaa 7775527
>ref|XM_970091.1| PREDICTED: Tribolium castaneum similar to Protein disulfide-isomerase precursor (PDI) (LOC664074), mRNA Length = 1996 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1217 acgccccgtggtgcggccactgcaa 1241
>emb|CR354425.7| Zebrafish DNA sequence from clone CH211-93N11 in linkage group 25, complete sequence Length = 161571 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1524 gtcatgtgaagttattgattttata 1548 ||||| ||||||||||||||||||| Sbjct: 54861 gtcatctgaagttattgattttata 54885 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1524 gtcatgtgaagttattgattttata 1548 ||||| ||||||||||||||||||| Sbjct: 55495 gtcatctgaagttattgattttata 55519
>gb|AC183298.3| Pan troglodytes BAC clone CH251-330I21 from chromosome 17, complete sequence Length = 174313 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1271 gttgttctgatgtttttctcc 1291 ||||||||||||||||||||| Sbjct: 27735 gttgttctgatgtttttctcc 27755
>gb|BC008549.1| Mus musculus prolyl 4-hydroxylase, beta polypeptide, mRNA (cDNA clone MGC:8228 IMAGE:3591404), complete cds Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 153 agagcaacttcgaggaggcgctggc 177
>gb|BC077700.1| Xenopus laevis cDNA clone IMAGE:3402485 Length = 1596 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 890 aaagtagtccttgcagttctg 910 ||||||||||||||||||||| Sbjct: 377 aaagtagtccttgcagttctg 357
>gb|BC070675.1| Xenopus laevis hypothetical protein MGC82356, mRNA (cDNA clone MGC:82356 IMAGE:4202582), complete cds Length = 1160 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 890 aaagtagtccttgcagttctg 910 ||||||||||||||||||||| Sbjct: 421 aaagtagtccttgcagttctg 401
>ref|XM_501758.1| Yarrowia lipolytica CLIB122, YALI0C12386g predicted mRNA Length = 1095 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 122 acgctccctggtgcggccactgcaa 146
>gb|AY582130.1| Ancylostoma caninum protein disulfide isomerase mRNA, complete cds Length = 1784 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 155 acgctccctggtgcggccactgcaa 179 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 1178 acgctccctggtgcggccactgcaa 1202
>gb|AY582129.1| Ancylostoma caninum protein disulfide isomerase gene, complete cds Length = 2847 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 586 acgctccctggtgcggccactgcaa 610 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 2138 acgctccctggtgcggccactgcaa 2162
>ref|XM_843145.1| PREDICTED: Canis familiaris similar to Protein disulfide-isomerase A4 precursor (Protein ERp-72) (ERp72), transcript variant 3 (LOC482715), mRNA Length = 2770 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||||||||||||||| |||||||| Sbjct: 1674 acgccccctggtgcgggcactgcaa 1698
>ref|XM_539831.2| PREDICTED: Canis familiaris similar to Protein disulfide-isomerase A4 precursor (Protein ERp-72) (ERp72), transcript variant 1 (LOC482715), mRNA Length = 2725 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||||||||||||||| |||||||| Sbjct: 1629 acgccccctggtgcgggcactgcaa 1653
>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence Length = 172452 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1010 caatgggaggaattcaccgagcctt 1034 |||||||||||||||| |||||||| Sbjct: 83254 caatgggaggaattcatcgagcctt 83278
>ref|NM_136866.2| Drosophila melanogaster ERp60 CG8983-RB, transcript variant B (ERp60), mRNA Length = 2423 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1940 acgccccatggtgcggccactgcaa 1964
>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence Length = 178254 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 571 gtccaggaagctggtgtgggt 591 ||||||||||||||||||||| Sbjct: 70392 gtccaggaagctggtgtgggt 70372
>gb|AF542038.1| Griffithsia japonica protein disulfide isomerase 2 precursor, mRNA, partial cds Length = 643 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 19 acgccccgtggtgcggccactgcaa 43
>gb|AC161001.4| Mus musculus BAC clone RP23-30A18 from chromosome 14, complete sequence Length = 215474 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1516 gattttatgtcatgtgaagttattg 1540 ||||||||||||||| ||||||||| Sbjct: 30839 gattttatgtcatgtcaagttattg 30815
>dbj|AK150002.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530116K15 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2502 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 191 agagcaacttcgaggaggcgctggc 215
>dbj|AK149965.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530110G01 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 1582 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK141304.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430024I01 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 164 agagcaacttcgaggaggcgctggc 188
>dbj|AK150805.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015J10 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK150755.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015B14 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2462 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 151 agagcaacttcgaggaggcgctggc 175
>gb|AC067923.16| Homo sapiens chromosome 17, clone RP11-698P18, complete sequence Length = 192881 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1271 gttgttctgatgtttttctcc 1291 ||||||||||||||||||||| Sbjct: 147445 gttgttctgatgtttttctcc 147425
>dbj|AK149605.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530001F08 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 1583 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 166 agagcaacttcgaggaggcgctggc 190
>dbj|AK152834.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830087B10 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK152791.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830086C17 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2475 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK150592.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830012H17 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2475 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK151546.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830031J06 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>gb|BC098966.1| Xenopus laevis hypothetical protein MGC114707, mRNA (cDNA clone MGC:114707 IMAGE:6634494), complete cds Length = 1638 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 890 aaagtagtccttgcagttctg 910 ||||||||||||||||||||| Sbjct: 422 aaagtagtccttgcagttctg 402
>dbj|AK146542.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920024A04 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2473 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK151351.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028G22 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2470 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 159 agagcaacttcgaggaggcgctggc 183
>dbj|AK150422.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007E02 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK167796.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730026L04 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK153365.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830149K22 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2475 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK152217.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830055G06 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK152141.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830049A10 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2480 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK168893.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920062L16 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2473 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK159965.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041F10 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK168612.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920038I15 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2479 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK159729.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420029D17 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK161537.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA, RIKEN full-length enriched library, clone:5033414I01 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 1223 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK159606.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025J07 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2479 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 165 agagcaacttcgaggaggcgctggc 189
>dbj|AK168336.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730091N22 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2458 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 147 agagcaacttcgaggaggcgctggc 171
>dbj|AK168330.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730091B09 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2474 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 163 agagcaacttcgaggaggcgctggc 187
>dbj|AK170603.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110B01 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2476 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 162 agagcaacttcgaggaggcgctggc 186
>dbj|AK169265.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920160L24 product:prolyl 4-hydroxylase, beta polypeptide, full insert sequence Length = 2473 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 162 agagcaacttcgaggaggcgctggc 186
>gb|AC005902.7| Homo sapiens 3p21.3-4 PAC RPCI4-544D10 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 89218 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1110 gtttggagagtttggaagaag 1130 ||||||||||||||||||||| Sbjct: 79522 gtttggagagtttggaagaag 79542
>gb|AC091154.3| Homo sapiens chromosome 17, clone RP11-750B16, complete sequence Length = 175783 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1117 gagtttggaagaaggtgaccatgga 1141 |||||||||||||||||| |||||| Sbjct: 78796 gagtttggaagaaggtgagcatgga 78772
>gb|AC099015.1| Drosophila melanogaster, chromosome 2R, region 48C-49A, BAC clone BACR26P21, complete sequence Length = 157010 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 154115 acgccccatggtgcggccactgcaa 154091
>gb|AY060296.1| Drosophila melanogaster GH13982 full length cDNA Length = 2467 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1971 acgccccatggtgcggccactgcaa 1995
>gb|S74296.1| PDI [Humicola insolens, KASI, mRNA, 1754 nt] Length = 1754 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1251 acgccccgtggtgcggccactgcaa 1275
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1165 ggcatatagagctggaagaac 1185 ||||||||||||||||||||| Sbjct: 1979467 ggcatatagagctggaagaac 1979447
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1760246 acgccccatggtgcggccactgcaa 1760270
>emb|X84217.1|AAA45RNA A.alternata mRNA for proteinsulfidisomerase Length = 1532 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||||||||||||||| |||||||| Sbjct: 786 acgccccctggtgcggtcactgcaa 810
>emb|X76120.1|PSTRXA Penicillum chrysogenum trxA gene, partial Length = 914 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 266 tcgtggacttccacgccccctggtgcggccactgcaa 302 |||| |||||||||||| |||||||||| | |||||| Sbjct: 593 tcgtcgacttccacgccacctggtgcggtccctgcaa 629
>emb|X06453.1|MMTHBPC Mouse mRNA for cellular thyroid hormone binding protein p55 Length = 2481 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 167 agagcaacttcgaggaggcgctggc 191
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 tcgaggcggcgctggccgccg 253 ||||||||||||||||||||| Sbjct: 175800 tcgaggcggcgctggccgccg 175780
>emb|CR407548.6| Zebrafish DNA sequence from clone DKEY-166N22 in linkage group 25, complete sequence Length = 136155 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1524 gtcatgtgaagttattgattttata 1548 ||||| ||||||||||||||||||| Sbjct: 43758 gtcatctgaagttattgattttata 43782 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1524 gtcatgtgaagttattgattttata 1548 ||||| ||||||||||||||||||| Sbjct: 44392 gtcatctgaagttattgattttata 44416
>gb|AC007474.5|AC007474 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR14L19, complete sequence Length = 192763 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 5767 acgccccatggtgcggccactgcaa 5743
>dbj|AK215676.1| Mus musculus cDNA, clone:Y2G0135M22, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026122, based on BLAT search Length = 384 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 18 agagcaacttcgaggaggcgctggc 42
>dbj|AK207057.1| Mus musculus cDNA, clone:Y2G0106M14, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000026122, based on BLAT search Length = 392 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 18 agagcaacttcgaggaggcgctggc 42
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 268 gtggacttccacgccccctggtgcggccactgc 300 ||||||||| ||||||||||||||||| |||| Sbjct: 1409416 gtggacttcttcgccccctggtgcggcccctgc 1409384
>emb|BX571718.9| Zebrafish DNA sequence from clone DKEYP-111A10 in linkage group 14, complete sequence Length = 168697 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1111 tttggagagtttggaagaagg 1131 ||||||||||||||||||||| Sbjct: 140119 tttggagagtttggaagaagg 140099
>gb|BC093512.1| Mus musculus prolyl 4-hydroxylase, beta polypeptide, mRNA (cDNA clone MGC:102617 IMAGE:5124376), complete cds Length = 2467 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 144 agagcaacttcgaggaggcgctggc 168
>gb|AC113211.5| Homo sapiens chromosome 17, clone RP11-115K3, complete sequence Length = 181625 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1271 gttgttctgatgtttttctcc 1291 ||||||||||||||||||||| Sbjct: 116852 gttgttctgatgtttttctcc 116872
>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence Length = 212775 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1110 gtttggagagtttggaagaag 1130 ||||||||||||||||||||| Sbjct: 3074 gtttggagagtttggaagaag 3094
>gb|AY166592.1| Leishmania donovani protein disulfide isomerase (PDI) gene, complete cds Length = 402 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 146 acgccccgtggtgcggccactgcaa 170
>gb|AC093011.3| Homo sapiens X BAC RP11-40P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148548 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 gtaaatgcagagaagtacaaa 396 ||||||||||||||||||||| Sbjct: 39761 gtaaatgcagagaagtacaaa 39781
>ref|NM_212402.1| Eremothecium gossypii AFR718Wp (AFR718W), mRNA Length = 1560 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 1184 acgccccatggtgcggccactgcaa 1208
>gb|AC005466.5|AC005466 Drosophila melanogaster, chromosome 2R, region 48C2-48C5, P1 clone DS03299, complete sequence Length = 72986 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 32370 acgccccatggtgcggccactgcaa 32346
>gb|AY616043.1| Prototheca wickerhamii plastid protein disulfide isomerase mRNA, partial cds; nuclear gene for plastid product Length = 526 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 313 acgccccttggtgcggccactgcaa 337
>emb|AM231410.1| Solanum tuberosum partial mRNA for putative disulphide isomerase (pdi gene) Length = 751 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 ||||||| ||||||||||||||||| Sbjct: 428 acgccccgtggtgcggccactgcaa 452
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 268 gtggacttccacgccccctggtgcggccactgc 300 ||||||||| ||||||||||||||||| |||| Sbjct: 1086411 gtggacttcttcgccccctggtgcggcccctgc 1086379
>gb|AC154195.1| Mus musculus BAC clone RP24-419F8 from 14, complete sequence Length = 159281 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1516 gattttatgtcatgtgaagttattg 1540 ||||||||||||||| ||||||||| Sbjct: 9475 gattttatgtcatgtcaagttattg 9499
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||| |||||||||||||||||||| Sbjct: 1735825 acgctccctggtgcggccactgcaa 1735849
>gb|U82634.1|AAU82634 Alternaria alternata putative protein disulfide isomerase mRNA, complete cds Length = 1305 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 acgccccctggtgcggccactgcaa 302 |||||||||||||||| |||||||| Sbjct: 779 acgccccctggtgcggtcactgcaa 803
>gb|U75437.1|HSU75437 Halobacterium salinarium transducer HtC protein (HtC) gene, complete cds Length = 2510 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 tcgaggcggcgctggccgccgtcga 257 |||||||||||||||| |||||||| Sbjct: 2120 tcgaggcggcgctggcggccgtcga 2144
>emb|AL663030.12| Mouse DNA sequence from clone RP23-84C12 on chromosome 11, complete sequence Length = 212085 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 28524 agagcaacttcgaggaggcgctggc 28500
>gb|J05185.1|MUSPDIA Mouse protein disulfide isomerase (ERp59) mRNA, complete cds Length = 2537 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 agagcaacttcgaggcggcgctggc 248 ||||||||||||||| ||||||||| Sbjct: 227 agagcaacttcgaggaggcgctggc 251 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 292,527,227 Number of extensions: 15669095 Number of successful extensions: 331625 Number of sequences better than 10.0: 112 Number of HSP's gapped: 331600 Number of HSP's successfully gapped: 167 Length of query: 1570 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1547 Effective length of database: 18,503,978,556 Effective search space: 28625654826132 Effective search space used: 28625654826132 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)