ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf35g17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK103619:Os03g0628900 209 2e-54
2AK073462:Os02g0656100 31 0.80
3AK058231:Os02g0656100 31 0.80
4AK099730:Os01g0957000 30 1.8
5Os04g0588600:Os04g0588600 29 3.0
6AK119744: 29 4.0
7AK066686:Os01g0147700 29 4.0
8AK103385:Os09g0383400 28 5.2
9AK063614:Os04g0604200 28 5.2
10Os03g0110200:Os03g0110200 28 6.7
11Os10g0355800:Os10g0355800 28 6.8
12AK063118:Os06g0233000 28 6.8
13AK110052: 28 8.8
14AK065143:Os06g0646700 28 8.8

>AK103619:Os03g0628900 |
          Length = 126
 Score =  209 bits (532), Expect = 2e-54
 Identities = 106/126 (84%), Positives = 112/126 (88%)
 Frame = +2

Query: 98  MQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDV 277
           MQQGDGTEAQVTW+DQQNINRFGRLNNRLHEL DEI+LAKEANENL+DAGNELILSDEDV
Sbjct: 1   MQQGDGTEAQVTWEDQQNINRFGRLNNRLHELHDEIKLAKEANENLDDAGNELILSDEDV 60

Query: 278 VRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEA 457
           VRFQIGEVFAHMP DDVETRLEQMKEDAA           SI++QMAELKKILYGKF +A
Sbjct: 61  VRFQIGEVFAHMPRDDVETRLEQMKEDAAKKLERLEQEKESIVSQMAELKKILYGKFKDA 120

Query: 458 INLEED 475
           INLEED
Sbjct: 121 INLEED 126



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>AK073462:Os02g0656100 |
          Length = 310

 Score = 31.2 bits (69), Expect = 0.80
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +2

Query: 14  APYCSKSSSDGRRISPWADADEFRREPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHEL 193
           AP C +S SD   ++ W D D+   + ++Q       Q ++ D  + N  G         
Sbjct: 228 APRCDQSFSDDGEVTDWDDDDD--EKADVQDEMAASPQRSYVDHDDYNGDG--------- 276

Query: 194 ADEI-RLAKEANENLEDAGNELILSDEDVVRFQ 289
            DE+  LA E  + ++   +E I    + +R Q
Sbjct: 277 -DELSELAAEVEDEVDRKADEFIAKFREQIRLQ 308



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>AK058231:Os02g0656100 |
          Length = 310

 Score = 31.2 bits (69), Expect = 0.80
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = +2

Query: 14  APYCSKSSSDGRRISPWADADEFRREPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHEL 193
           AP C +S SD   ++ W D D+   + ++Q       Q ++ D  + N  G         
Sbjct: 228 APRCDQSFSDDGEVTDWDDDDD--EKADVQDEMAASPQRSYVDHDDYNGDG--------- 276

Query: 194 ADEI-RLAKEANENLEDAGNELILSDEDVVRFQ 289
            DE+  LA E  + ++   +E I    + +R Q
Sbjct: 277 -DELSELAAEVEDEVDRKADEFIAKFREQIRLQ 308



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>AK099730:Os01g0957000 |
          Length = 594

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 65  ADADEFRREPEMQQGDGTEAQVTWDDQQNINRFGRL-NNRLHELADEIRLAKEANENLED 241
           A+A+E+RR+ E++             Q+ I  +G   NN L +LA ++ L   A++    
Sbjct: 152 AEAEEWRRKYELEMAH--------KQQRKIKGYGSCANNELEKLASQLTLETPASDQAGC 203

Query: 242 AGNELILSDE 271
            GN  I S E
Sbjct: 204 CGNHGICSHE 213



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>Os04g0588600:Os04g0588600 |
          Length = 1150

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 560 CSEKNKAPEQEQV-SYDLTPKKAAPVLDINLPPG*WPL 450
           C+ +NK    E++  Y   P +A  V+D   PP  WPL
Sbjct: 841 CNTENKMISVERILQYSRIPSEAPLVVDYRRPPNNWPL 878



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>AK119744: |
          Length = 746

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 23/61 (37%), Positives = 29/61 (47%)
 Frame = +2

Query: 74  DEFRREPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNE 253
           DEFR   E + GD T A +  D+Q     FG +N   HE A     A EA  + E  G +
Sbjct: 243 DEFRELFE-KHGDITSASIARDEQGKSRGFGFVNYIKHEAAS---AAVEALNDTEFRGQK 298

Query: 254 L 256
           L
Sbjct: 299 L 299



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>AK066686:Os01g0147700 |
          Length = 700

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +2

Query: 179 RLHELADE-IRLAKEANENLEDAGNELILSDEDVV 280
           RL EL+ E ++  +E+N+ L++A  ELI+  ED++
Sbjct: 524 RLEELSGELVKKERESNDELQEARKELIMGLEDML 558



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>AK103385:Os09g0383400 |
          Length = 326

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = +2

Query: 140 DQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDVVRFQIGEVFAHMPV 319
           D+ ++   G   N++  L   +R  ++    +ED+G E+ L D +  R       A +  
Sbjct: 75  DEADMLLCGSFENQVIRLIHMLRFDEKLLSRMEDSGKEISLGDTNEYREDSDSQSAELSA 134

Query: 320 DDVE 331
           DD E
Sbjct: 135 DDEE 138



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>AK063614:Os04g0604200 |
          Length = 293

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 733 FKPYSLA*NIVNIPSLVSQVPIYVYSPQASAGQPAPIYSPTEI 605
           F  YS+  N   I  LV  +PI  +     +G P PIY P  +
Sbjct: 150 FHTYSVIWNPDEILILVDNMPIRQFKNHLDSGVPFPIYQPMRL 192



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>Os03g0110200:Os03g0110200 |
          Length = 1468

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 137  PTSPAPLCHRPAASPVPFG 81
            PT+P P  H P  +P PFG
Sbjct: 1350 PTAPRPAAHVPTPTPPPFG 1368



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>Os10g0355800:Os10g0355800 |
          Length = 766

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 23/67 (34%), Positives = 31/67 (46%)
 Frame = -1

Query: 676 VPIYVYSPQASAGQPAPIYSPTEINHANA*WGTIITRNNVARRTKHLNKNRCHTT*HLKR 497
           +P+ VY P       A I + T++          I+R  V  RT    KNRC TT H K 
Sbjct: 671 IPVDVYLPGCPPKPEAVIDALTKLRKK-------ISREIVEDRTLSQKKNRCFTTSH-KL 722

Query: 496 QLRFSTS 476
            +R ST+
Sbjct: 723 YVRRSTN 729



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>AK063118:Os06g0233000 |
          Length = 140

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 30/88 (34%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
 Frame = +1

Query: 271 RCGAFPNWGSVCPHASGRCGN*ARADERGCGYEVREAGGREGIHPCPDGRTEEDPLR--- 441
           RC  F  WG     +  R G  A A E    + V   GG          R EE  LR   
Sbjct: 35  RCCCF--WGPWASSSYSRAGGPAAAAEEEWWHRVGGGGGERRRR----WRREEAQLRPAQ 88

Query: 442 ---EIWRGH----QPGGRLMSRTGAAFL 504
              +  RG     QPGGRL  RT   FL
Sbjct: 89  LRAQFRRGPRRRVQPGGRLRRRTDRIFL 116



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>AK110052: |
          Length = 913

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 20/95 (21%)
 Frame = +2

Query: 83  RREPEMQQGDGTEAQVTWDDQQNI-----------NRFGRLNNRLHELADEIRLA----- 214
           RRE E Q     EA + W+ QQ +           NR GR      E  DE  LA     
Sbjct: 452 RRESERQGQAAEEASIIWEAQQQLAITSEKVNQLMNRSGRAAG--SERKDEEELANLSLV 509

Query: 215 ----KEANENLEDAGNELILSDEDVVRFQIGEVFA 307
               + A E  E A + L+   + V+R  +  V A
Sbjct: 510 AEDDEAAKEAAEAAADSLLWKSKKVLRSHLDAVRA 544



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>AK065143:Os06g0646700 |
          Length = 109

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 70  RRRIPKGTGDAA--GRWHRGA 126
           RRR P G+G AA  GRW RG+
Sbjct: 67  RRRSPSGSGSAATKGRWARGS 87


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,732,708
Number of extensions: 509587
Number of successful extensions: 1960
Number of sequences better than 10.0: 14
Number of HSP's gapped: 1958
Number of HSP's successfully gapped: 14
Length of query: 251
Length of database: 15,399,855
Length adjustment: 98
Effective length of query: 153
Effective length of database: 11,475,837
Effective search space: 1755803061
Effective search space used: 1755803061
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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