ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35g17 |
|---|---|
| Clone Library Name | barley_pub |
>Q9M4C4:PFD4_AVEFA Probable prefoldin subunit 4 - Avena fatua (Wild oats)| Length = 126 Score = 211 bits (536), Expect = 3e-54 Identities = 107/126 (84%), Positives = 110/126 (87%) Frame = +2 Query: 98 MQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDV 277 MQQGDGTEAQVTW+DQQNINRFGRLNNR HEL DEIRLAKEANENLEDAGNELIL DEDV Sbjct: 1 MQQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDV 60 Query: 278 VRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEA 457 VRFQIGEVFAHMP+DDVE RLEQMKEDAA SILAQMAELKKILYGKF +A Sbjct: 61 VRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDA 120 Query: 458 INLEED 475 INLEED Sbjct: 121 INLEED 126
>Q9M4B5:PFD4_ARATH Probable prefoldin subunit 4 - Arabidopsis thaliana (Mouse-ear| cress) Length = 128 Score = 158 bits (399), Expect = 2e-38 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 2/128 (1%) Frame = +2 Query: 98 MQQGD--GTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDE 271 M QG G+E +VTW+DQQNIN F RLNNR+H+L D+I+ AKE ENLEDAGNELIL+DE Sbjct: 1 MLQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILADE 60 Query: 272 DVVRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFG 451 ++VRFQIGEVFAH+P DDVET++E+MKE SI+ QMA LKK+LY KF Sbjct: 61 EMVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKFK 120 Query: 452 EAINLEED 475 ++INLEED Sbjct: 121 DSINLEED 128
>Q9NQP4:PFD4_HUMAN Prefoldin subunit 4 - Homo sapiens (Human)| Length = 134 Score = 87.0 bits (214), Expect = 7e-17 Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 2/128 (1%) Frame = +2 Query: 98 MQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDED- 274 M++ + VT++DQQ IN+F R +R+ EL +EI + K+ +NLEDA ++++L+D+D Sbjct: 5 MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDC 64 Query: 275 -VVRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFG 451 ++ +QIG+VF ++ + LE+ K++ SI +A+LK LY KFG Sbjct: 65 LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124 Query: 452 EAINLEED 475 INLE D Sbjct: 125 SNINLEAD 132
>Q2TBR6:PFD4_BOVIN Prefoldin subunit 4 - Bos taurus (Bovine)| Length = 134 Score = 86.7 bits (213), Expect = 9e-17 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 2/128 (1%) Frame = +2 Query: 98 MQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDED- 274 M++ + VT++DQQ IN+F R +R+ EL +EI + K+ +NLEDA +++L+D+D Sbjct: 5 MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDC 64 Query: 275 -VVRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFG 451 ++ +QIG+VF ++ + LE+ K++ SI +A+LK LY KFG Sbjct: 65 LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124 Query: 452 EAINLEED 475 INLE D Sbjct: 125 SNINLEAD 132
>P53900:PFD4_YEAST Prefoldin subunit 4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 129 Score = 76.6 bits (187), Expect = 9e-14 Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Frame = +2 Query: 98 MQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDED- 274 + QG QVT++DQQ IN F +L R +A E+ L +E E L+D E+ L DED Sbjct: 4 LPQGQRNNTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDE 63 Query: 275 VVRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGE 454 V++++G++F M V +LE+ E I +++ LK ILY KFG+ Sbjct: 64 PVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKIETLEDKQRDIDSRLDALKAILYAKFGD 123 Query: 455 AINLE 469 INLE Sbjct: 124 NINLE 128
>Q9VRL3:PFD4_DROME Probable prefoldin subunit 4 - Drosophila melanogaster (Fruit fly)| Length = 138 Score = 67.8 bits (164), Expect = 4e-11 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Frame = +2 Query: 119 EAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDV-VRFQIG 295 + ++++DQQ INRF + N R+ + E+ + ++LE+A E+ L DED + F +G Sbjct: 18 DVHISFEDQQRINRFAKHNARMDDFKAELETKRNELKSLEEALEEIELFDEDEDIPFLVG 77 Query: 296 EVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEAINLEED 475 EVF ++ + L++ KE I A+M ELK LY +FG I+LE + Sbjct: 78 EVFLSHKLEKTQDMLKETKEQVLKEIAGVEAKAKVIKAEMDELKAHLYQRFGSNISLEAE 137
>Q17435:PFD4_CAEEL Probable prefoldin subunit 4 - Caenorhabditis elegans| Length = 126 Score = 64.7 bits (156), Expect = 4e-10 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 3/120 (2%) Frame = +2 Query: 125 QVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDED---VVRFQIG 295 +V+ +DQ +N+F R +L +++ AK +N+ +A +E++L D++ + +IG Sbjct: 6 KVSAEDQALLNKFARSYQTQTQLKADVKEAKTLIDNINEASDEILLLDDEDSASIPCRIG 65 Query: 296 EVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEAINLEED 475 F H D + LE K A +I A M ++KK+LY KFG+ INL+ + Sbjct: 66 SCFVHFNGDSLNEHLEGKKTTAEKVLSEKTSELDAISADMEQIKKVLYAKFGDQINLDAE 125
>Q9UTD4:PFD4_SCHPO Probable prefoldin subunit 4 - Schizosaccharomyces pombe (Fission| yeast) Length = 123 Score = 51.6 bits (122), Expect = 3e-06 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 4/121 (3%) Frame = +2 Query: 119 EAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDE----DVVRF 286 + V +DQ+N+N F L++R +I+ K E++ DA NE L DE D+ Sbjct: 3 QVPVLAEDQRNLNEFSVLHSRKAIQELDIKNLKTQIEDIVDAKNECELLDEDDGDDIPAL 62 Query: 287 QIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEAINL 466 ++G+ F + + + +LEQ +E ++ ELK +LY KF + INL Sbjct: 63 KVGDAFFQVSLPVLLDQLEQSEESLEKQVDVLRSSMEKDETRIQELKSMLYSKFHDQINL 122 Query: 467 E 469 + Sbjct: 123 D 123
>Q9X1R5:RF2_THEMA Peptide chain release factor 2 - Thermotoga maritima| Length = 369 Score = 33.5 bits (75), Expect = 0.90 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = +2 Query: 74 DEFRREPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNE 253 DE +E E + T+ V WDDQ+ + + RL ++++++ + E+LE A Sbjct: 29 DEINKELEEVEKKLTDPSV-WDDQKKAREYTQKLKRLKNISEDLKRVRSLFEDLEVA--- 84 Query: 254 LILSDED 274 + LSDED Sbjct: 85 IELSDED 91
>Q2TBQ7:FA82A_BOVIN Protein FAM82A - Bos taurus (Bovine)| Length = 410 Score = 32.7 bits (73), Expect = 1.5 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +2 Query: 89 EPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLED 241 + EM G GT A Q + + L + EL +EIR+ KEA LE+ Sbjct: 55 QDEMPSGQGTTAIFQGRQLQILEKLNELLTHMEELKEEIRVLKEAIPKLEE 105
>Q96QP1:ALPK1_HUMAN Alpha-protein kinase 1 - Homo sapiens (Human)| Length = 1244 Score = 32.3 bits (72), Expect = 2.0 Identities = 18/74 (24%), Positives = 34/74 (45%) Frame = +2 Query: 32 SSSDGRRISPWADADEFRREPEMQQGDGTEAQVTWDDQQNINRFGRLNNRLHELADEIRL 211 SS+ ++ D R+EP + T+ ++ +R GR + LH ++ L Sbjct: 591 SSASWEEVNYHVDDRSARKEPGKEHLVDTQCSTALSEELENDREGRAMHSLHSQLHDLSL 650 Query: 212 AKEANENLEDAGNE 253 + N+NLE + N+ Sbjct: 651 QEPNNDNLEPSQNQ 664
>Q96KP6:TNIP3_HUMAN TNFAIP3-interacting protein 3 - Homo sapiens (Human)| Length = 319 Score = 30.8 bits (68), Expect = 5.8 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 19/115 (16%) Frame = +2 Query: 68 DADEFRREPEMQQGDGTEAQVTWDD-QQNINRFGRLNNRLHELADEIRL----------- 211 D + +R+ + Q+ D + +T D Q+ RLN LHEL +E +L Sbjct: 92 DPHQRQRKDDRQREDDRQRDLTRDRLQREEKEKERLNEELHELKEENKLLKGKNTLANKE 151 Query: 212 -------AKEANENLEDAGNELILSDEDVVRFQIGEVFAHMPVDDVETRLEQMKE 355 K N+ L+DA N ED +R E F H +++ T +E +K+ Sbjct: 152 KEHYECEIKRLNKALQDALNIKCSFSEDCLRKSRVE-FCH---EEMRTEMEVLKQ 202
>Q20942:NAS38_CAEEL Zinc metalloproteinase nas-38 precursor - Caenorhabditis elegans| Length = 745 Score = 30.8 bits (68), Expect = 5.8 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Frame = +1 Query: 274 CGAFPNWGSVCPHASGRCGN*ARADERGCGYEVREAGGREGIHP-----CPDGRT---EE 429 CGA+ W C G CG+ R +R C +EA +E P CPDG Sbjct: 631 CGAWSEWQGECSQQCGGCGH--RLRKREC---KKEACRKEEKRPCNFSACPDGTNFLINN 685 Query: 430 DPLREIWRG 456 +WRG Sbjct: 686 AEFHILWRG 694
>Q09856:YAF2_SCHPO Uncharacterized protein C29E6.02 - Schizosaccharomyces pombe| (Fission yeast) Length = 542 Score = 30.4 bits (67), Expect = 7.6 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%) Frame = +2 Query: 8 LSAPYCSKSSSDGRRISPWADADEFRREPEMQQGDGTEAQVTWDDQ-QNINRFG--RLNN 178 L + +SSS + P A + RR +++Q +AQV W+ + +N N G + N Sbjct: 8 LESSQLRESSSPNSQNKPNAMEEIKRRRLQLEQRLAQQAQVPWEKRSENGNNAGMETIQN 67 Query: 179 RLHELADEIRLAKEANENL 235 R+ EL + + AK N N+ Sbjct: 68 RISELKE--KTAKRFNANI 84
>Q9HYT6:RAPA_PSEAE RNA polymerase-associated protein rapA - Pseudomonas aeruginosa| Length = 950 Score = 30.4 bits (67), Expect = 7.6 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 125 QVTWDDQQNINRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDVVRFQIG 295 Q W+D + NR+ R + R+ L D +++ K+ + A E L ED +R + G Sbjct: 457 QQQWEDGDDNNRWWRFDPRVEWLIDTLKMLKQFKVLVICAHAETALDLEDALRLRSG 513
>Q05870:MYSP_SCHJA Paramyosin - Schistosoma japonicum (Blood fluke)| Length = 866 Score = 30.4 bits (67), Expect = 7.6 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +2 Query: 104 QGDGTEAQVTWDDQQNI-----NRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSD 268 +GD Q DD N +R RLNN + LADE+R +E ++ E +L + Sbjct: 648 EGDIGVMQADMDDAINAKQAAEDRATRLNNEVLRLADELRQEQENYKHAEALRKQLEIEI 707 Query: 269 EDV-VRFQIGEVFA 307 ++ V+ + E FA Sbjct: 708 REITVKLEEAEAFA 721
>O54910:IKBE_MOUSE NF-kappa-B inhibitor epsilon - Mus musculus (Mouse)| Length = 364 Score = 30.4 bits (67), Expect = 7.6 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +2 Query: 5 PLSAPYCSKSSSDGRRISPWADADEFRREPEMQQGDGTEAQVTW 136 P +AP SS PW A E +EPE + DG A T+ Sbjct: 32 PTAAP--GSGSSQSGCPQPWRHAPETHKEPEKEDADGERADSTY 73
>Q8R313:EXOC6_MOUSE Exocyst complex component 6 - Mus musculus (Mouse)| Length = 802 Score = 30.4 bits (67), Expect = 7.6 Identities = 16/79 (20%), Positives = 37/79 (46%) Frame = +2 Query: 218 EANENLEDAGNELILSDEDVVRFQIGEVFAHMPVDDVETRLEQMKEDAAMXXXXXXXXXX 397 + N +DAG E+I+ ED++R +I + V+ ++ L ++ + + Sbjct: 94 DTNRRFQDAGKEVIIQTEDIIRCRIQQRNITTVVEKLQLCLPVLEMYSKLKEQMSMKRYY 153 Query: 398 SILAQMAELKKILYGKFGE 454 S L M +L+ + + + + Sbjct: 154 SALKTMEQLENVYFPRVSQ 172
>Q5HJ86:ESSC_STAAC Protein essC - Staphylococcus aureus (strain COL)| Length = 1479 Score = 30.4 bits (67), Expect = 7.6 Identities = 22/107 (20%), Positives = 50/107 (46%) Frame = +2 Query: 152 INRFGRLNNRLHELADEIRLAKEANENLEDAGNELILSDEDVVRFQIGEVFAHMPVDDVE 331 IN R+ L++ ++ + + ++D +LS +D V F IG+ F H D+ + Sbjct: 1166 INMKTRIAMFLYDKSEVSNVVGQQKFAVKDVVGRALLSSDDNVSFHIGQPFKH---DETK 1222 Query: 332 TRLEQMKEDAAMXXXXXXXXXXSILAQMAELKKILYGKFGEAINLEE 472 + +Q+ ++ + + + M + +I Y + E++NL + Sbjct: 1223 SYNDQINDEVSAMTEFYKGETPNDIPMMPD--EIKYEDYRESLNLPD 1267
>P26304:NDHK_WHEAT NAD(P)H-quinone oxidoreductase chain K, chloroplast - Triticum| aestivum (Wheat) Length = 245 Score = 30.0 bits (66), Expect = 10.0 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = -1 Query: 676 VPIYVYSPQASAGQPAPIYSPTEINHANA*WGTIITRNNVARRTKHLNKNRCHTT*HLKR 497 +P+ VY P A I + T++ I+R V RT NKNRC TT H K Sbjct: 150 IPVDVYLPGCPPKPEAVIDALTKLRKK-------ISREIVEDRTLSQNKNRCFTTSH-KL 201 Query: 496 QLRFST 479 +R ST Sbjct: 202 YVRRST 207
>Q5JK52:NADK1_ORYSJ Probable NAD kinase 1 - Oryza sativa subsp. japonica (Rice)| Length = 532 Score = 30.0 bits (66), Expect = 10.0 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +2 Query: 65 ADADEFRREPEMQQGDGTEAQVTWDDQQNINRFGRL-NNRLHELADEIRLAKEANENLED 241 A+A+E+RR+ E++ Q+ I +G NN L +LA ++ L A++ Sbjct: 90 AEAEEWRRKYELEMAH--------KQQRKIKGYGSCANNELEKLASQLTLETPASDQAGC 141 Query: 242 AGNELILSDE 271 GN I S E Sbjct: 142 CGNHGICSHE 151 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 130,102,285 Number of extensions: 2861595 Number of successful extensions: 9404 Number of sequences better than 10.0: 21 Number of HSP's gapped: 9380 Number of HSP's successfully gapped: 21 Length of query: 251 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 140 Effective length of database: 70,239,694 Effective search space: 9833557160 Effective search space used: 9833557160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
