| Clone Name | FLbaf35d21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052438.1| Oryza sativa (japonica cultivar-group) Os02g0150700 (Os02g0150700) mRNA, complete cds Length = 2126 Score = 280 bits (141), Expect = 2e-71 Identities = 363/437 (83%) Strand = Plus / Plus Query: 1576 gaaggcattgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttact 1635 ||||| |||||||||||||| |||| ||||| ||||||||||||||||| || || ||| Sbjct: 1542 gaaggaattgcagaggtattactagctctggacaggattgaacaagaagcagaactgact 1601 Query: 1636 tatgagcaattgcgggtactggagacaaatctgttacttggtgcctttacctcccatgac 1695 |||||||||||| ||| ||||||||||| | || |||||||| || ||||||||||| Sbjct: 1602 tatgagcaattgatggtgttggagacaaatatattgcttggtgctttcacctcccatgat 1661 Query: 1696 caccatagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcatta 1755 || ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1662 cagcatagtgacatgcgcatggatatcgacaacatgtcctatgaggaattattagcatta 1721 Query: 1756 gaagagagaataggattcgtaagtactgctctttctgaagaacagtttgcgaaatgtatc 1815 | ||| |||||||| | || || || ||||||||||| || || |||| |||||| || Sbjct: 1722 ggagacagaataggctctgttagcaccgctctttctgaggagcaatttgtgaaatgcctc 1781 Query: 1816 agaaggcgtttatatagaccagttgctgcaaagggaaacaaaacagccatagatgacatc 1875 ||||| || |||||| |||||| ||| |||| | |||| || |||| |||||| Sbjct: 1782 agaagaagtatatatataccagtggctacaaaagcaaacgcgcaagttgtagacgacatc 1841 Query: 1876 aaatgcagcatatgccaggaggagttcgtgaagggcgaagaggttggcaggttgcggtgc 1935 ||||||||||||||||||||||||| | | |||| ||||| ||||| || || | || Sbjct: 1842 aaatgcagcatatgccaggaggagtacatagagggtgaagaagttggacggctgggatgt 1901 Query: 1936 gagcaccagtaccatgtgtgctgcattcgccagtggctcctgcagaagaactggtgccca 1995 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1902 gagcatcagtaccatgtgtgctgcattcaccagtggctcaggcagaagaactggtgtcca 1961 Query: 1996 gtctgcaaagctccagc 2012 | ||||||||| |||| Sbjct: 1962 atatgcaaagcttcagc 1978 Score = 69.9 bits (35), Expect = 4e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 404 caagagtcaatcctatgaaaaccaggctggttgataatcaggagagacccagata 458 ||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 388 caagactcaatccgatgaaaaccaggctgtctgataatcaggagagaccaagata 442 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 530 ttccccttagaaaatttggtgaggaaaagcgaaggcagactttgttggaaggggctgacg 589 |||| ||||| ||||| ||||| ||||| |||||||| || ||||||| ||||| ||| Sbjct: 502 ttccgcttaggaaattcggtgacgaaaaacgaaggcaaacgttgttggcaggggtagaca 561 Query: 590 ttgctgaaagtagtagaagaaa 611 ||||||||||||| || ||||| Sbjct: 562 ttgctgaaagtagcagcagaaa 583 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1013 ttctgccatcaggatgttcatctgattctgtatatagaatgagcttcgatgctatgagaa 1072 ||||||||||||| || ||||||| |||||| ||||| | ||| || ||||| ||||||| Sbjct: 976 ttctgccatcaggttgctcatctggttctgtttatagcaggaggtttgatgcaatgagaa 1035 Query: 1073 agagagcttctgatgggg 1090 | || |||||||||||| Sbjct: 1036 aaaggacttctgatgggg 1053 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1410 aagaccagtctctgtggaactacctcatgcaatttactcatctag 1454 ||||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 1373 aagaccattctctgcagaattacctcatgcaatttactcatctag 1417 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1235 ttcaggattcagcagtatcagtaaggacaaga 1266 |||||||||||||||| ||||||||||||||| Sbjct: 1201 ttcaggattcagcagtgtcagtaaggacaaga 1232
>dbj|AK120070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003N07, full insert sequence Length = 2128 Score = 280 bits (141), Expect = 2e-71 Identities = 363/437 (83%) Strand = Plus / Plus Query: 1576 gaaggcattgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttact 1635 ||||| |||||||||||||| |||| ||||| ||||||||||||||||| || || ||| Sbjct: 1543 gaaggaattgcagaggtattactagctctggacaggattgaacaagaagcagaactgact 1602 Query: 1636 tatgagcaattgcgggtactggagacaaatctgttacttggtgcctttacctcccatgac 1695 |||||||||||| ||| ||||||||||| | || |||||||| || ||||||||||| Sbjct: 1603 tatgagcaattgatggtgttggagacaaatatattgcttggtgctttcacctcccatgat 1662 Query: 1696 caccatagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcatta 1755 || ||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1663 cagcatagtgacatgcgcatggatatcgacaacatgtcctatgaggaattattagcatta 1722 Query: 1756 gaagagagaataggattcgtaagtactgctctttctgaagaacagtttgcgaaatgtatc 1815 | ||| |||||||| | || || || ||||||||||| || || |||| |||||| || Sbjct: 1723 ggagacagaataggctctgttagcaccgctctttctgaggagcaatttgtgaaatgcctc 1782 Query: 1816 agaaggcgtttatatagaccagttgctgcaaagggaaacaaaacagccatagatgacatc 1875 ||||| || |||||| |||||| ||| |||| | |||| || |||| |||||| Sbjct: 1783 agaagaagtatatatataccagtggctacaaaagcaaacgcgcaagttgtagacgacatc 1842 Query: 1876 aaatgcagcatatgccaggaggagttcgtgaagggcgaagaggttggcaggttgcggtgc 1935 ||||||||||||||||||||||||| | | |||| ||||| ||||| || || | || Sbjct: 1843 aaatgcagcatatgccaggaggagtacatagagggtgaagaagttggacggctgggatgt 1902 Query: 1936 gagcaccagtaccatgtgtgctgcattcgccagtggctcctgcagaagaactggtgccca 1995 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1903 gagcatcagtaccatgtgtgctgcattcaccagtggctcaggcagaagaactggtgtcca 1962 Query: 1996 gtctgcaaagctccagc 2012 | ||||||||| |||| Sbjct: 1963 atatgcaaagcttcagc 1979 Score = 69.9 bits (35), Expect = 4e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 404 caagagtcaatcctatgaaaaccaggctggttgataatcaggagagacccagata 458 ||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 389 caagactcaatccgatgaaaaccaggctgtctgataatcaggagagaccaagata 443 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 530 ttccccttagaaaatttggtgaggaaaagcgaaggcagactttgttggaaggggctgacg 589 |||| ||||| ||||| ||||| ||||| |||||||| || ||||||| ||||| ||| Sbjct: 503 ttccgcttaggaaattcggtgacgaaaaacgaaggcaaacgttgttggcaggggtagaca 562 Query: 590 ttgctgaaagtagtagaagaaa 611 ||||||||||||| || ||||| Sbjct: 563 ttgctgaaagtagcagcagaaa 584 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1013 ttctgccatcaggatgttcatctgattctgtatatagaatgagcttcgatgctatgagaa 1072 ||||||||||||| || ||||||| |||||| ||||| | ||| || ||||| ||||||| Sbjct: 977 ttctgccatcaggttgctcatctggttctgtttatagcaggaggtttgatgcaatgagaa 1036 Query: 1073 agagagcttctgatgggg 1090 | || |||||||||||| Sbjct: 1037 aaaggacttctgatgggg 1054 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1410 aagaccagtctctgtggaactacctcatgcaatttactcatctag 1454 ||||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 1374 aagaccattctctgcagaattacctcatgcaatttactcatctag 1418 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1235 ttcaggattcagcagtatcagtaaggacaaga 1266 |||||||||||||||| ||||||||||||||| Sbjct: 1202 ttcaggattcagcagtgtcagtaaggacaaga 1233
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 93.7 bits (47), Expect = 3e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 1655 tggagacaaatctgttacttggtgcctttacctcccatgaccaccatagcgacatgcgga 1714 ||||||||||| | || |||||||| || ||||||||||| || ||||| |||||||| | Sbjct: 2794103 tggagacaaatatattgcttggtgctttcacctcccatgatcagcatagtgacatgcgca 2794162 Query: 1715 tggatattgacaacatgtcctatgagg 1741 ||||||| ||||||||||||||||||| Sbjct: 2794163 tggatatcgacaacatgtcctatgagg 2794189 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 1936 gagcaccagtaccatgtgtgctgcattcgccagtggctcctgcagaagaactggtgccca 1995 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 2795180 gagcatcagtaccatgtgtgctgcattcaccagtggctcaggcagaagaactggtgtcca 2795239 Query: 1996 gtctgcaaagctccagc 2012 | ||||||||| |||| Sbjct: 2795240 atatgcaaagcttcagc 2795256 Score = 69.9 bits (35), Expect = 4e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 404 caagagtcaatcctatgaaaaccaggctggttgataatcaggagagacccagata 458 ||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 2792706 caagactcaatccgatgaaaaccaggctgtctgataatcaggagagaccaagata 2792760 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 530 ttccccttagaaaatttggtgaggaaaagcgaaggcagactttgttggaaggggctgacg 589 |||| ||||| ||||| ||||| ||||| |||||||| || ||||||| ||||| ||| Sbjct: 2792820 ttccgcttaggaaattcggtgacgaaaaacgaaggcaaacgttgttggcaggggtagaca 2792879 Query: 590 ttgctgaaagtagtagaagaaa 611 ||||||||||||| || ||||| Sbjct: 2792880 ttgctgaaagtagcagcagaaa 2792901 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1013 ttctgccatcaggatgttcatctgattctgtatatagaatgagcttcgatgctatgagaa 1072 ||||||||||||| || ||||||| |||||| ||||| | ||| || ||||| ||||||| Sbjct: 2793294 ttctgccatcaggttgctcatctggttctgtttatagcaggaggtttgatgcaatgagaa 2793353 Query: 1073 agagagcttctgatgggg 1090 | || |||||||||||| Sbjct: 2793354 aaaggacttctgatgggg 2793371 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1410 aagaccagtctctgtggaactacctcatgcaatttactcatctag 1454 ||||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 2793691 aagaccattctctgcagaattacctcatgcaatttactcatctag 2793735 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1235 ttcaggattcagcagtatcagtaaggacaaga 1266 |||||||||||||||| ||||||||||||||| Sbjct: 2793519 ttcaggattcagcagtgtcagtaaggacaaga 2793550 Score = 56.0 bits (28), Expect = 6e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 1739 aggaactattagcattagaagagagaataggattcgtaagtactgctctttctgaagaac 1798 ||||| |||||||||||| ||| |||||||| | || || || ||||||||||| || | Sbjct: 2794350 aggaattattagcattaggagacagaataggctctgttagcaccgctctttctgaggagc 2794409 Query: 1799 agtttgcgaaatgtatcagaaggcgtttatatagaccagttgctgcaaagggaaacaaaa 1858 | |||| |||||| ||||||| || |||||| |||||| ||| |||| | |||| Sbjct: 2794410 aatttgtgaaatgcctcagaagaagtatatatataccagtggctacaaaagcaaacgcgc 2794469 Query: 1859 cagccatagatgacatcaaatgcagcatatgccagg 1894 || |||| ||||||||||||||||||||||||| Sbjct: 2794470 aagttgtagacgacatcaaatgcagcatatgccagg 2794505 Score = 50.1 bits (25), Expect = 0.036 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1589 aggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||| |||| ||||| ||||||||||||||||| || || ||||||||| Sbjct: 2793960 aggtattactagctctggacaggattgaacaagaagcagaactgacttatgag 2794012
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 93.7 bits (47), Expect = 3e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 1655 tggagacaaatctgttacttggtgcctttacctcccatgaccaccatagcgacatgcgga 1714 ||||||||||| | || |||||||| || ||||||||||| || ||||| |||||||| | Sbjct: 62331 tggagacaaatatattgcttggtgctttcacctcccatgatcagcatagtgacatgcgca 62390 Query: 1715 tggatattgacaacatgtcctatgagg 1741 ||||||| ||||||||||||||||||| Sbjct: 62391 tggatatcgacaacatgtcctatgagg 62417 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 1936 gagcaccagtaccatgtgtgctgcattcgccagtggctcctgcagaagaactggtgccca 1995 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 63408 gagcatcagtaccatgtgtgctgcattcaccagtggctcaggcagaagaactggtgtcca 63467 Query: 1996 gtctgcaaagctccagc 2012 | ||||||||| |||| Sbjct: 63468 atatgcaaagcttcagc 63484 Score = 69.9 bits (35), Expect = 4e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 404 caagagtcaatcctatgaaaaccaggctggttgataatcaggagagacccagata 458 ||||| ||||||| ||||||||||||||| |||||||||||||||||| ||||| Sbjct: 60934 caagactcaatccgatgaaaaccaggctgtctgataatcaggagagaccaagata 60988 Score = 60.0 bits (30), Expect = 4e-05 Identities = 69/82 (84%) Strand = Plus / Plus Query: 530 ttccccttagaaaatttggtgaggaaaagcgaaggcagactttgttggaaggggctgacg 589 |||| ||||| ||||| ||||| ||||| |||||||| || ||||||| ||||| ||| Sbjct: 61048 ttccgcttaggaaattcggtgacgaaaaacgaaggcaaacgttgttggcaggggtagaca 61107 Query: 590 ttgctgaaagtagtagaagaaa 611 ||||||||||||| || ||||| Sbjct: 61108 ttgctgaaagtagcagcagaaa 61129 Score = 60.0 bits (30), Expect = 4e-05 Identities = 66/78 (84%) Strand = Plus / Plus Query: 1013 ttctgccatcaggatgttcatctgattctgtatatagaatgagcttcgatgctatgagaa 1072 ||||||||||||| || ||||||| |||||| ||||| | ||| || ||||| ||||||| Sbjct: 61522 ttctgccatcaggttgctcatctggttctgtttatagcaggaggtttgatgcaatgagaa 61581 Query: 1073 agagagcttctgatgggg 1090 | || |||||||||||| Sbjct: 61582 aaaggacttctgatgggg 61599 Score = 58.0 bits (29), Expect = 1e-04 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1410 aagaccagtctctgtggaactacctcatgcaatttactcatctag 1454 ||||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 61919 aagaccattctctgcagaattacctcatgcaatttactcatctag 61963 Score = 56.0 bits (28), Expect = 6e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 1235 ttcaggattcagcagtatcagtaaggacaaga 1266 |||||||||||||||| ||||||||||||||| Sbjct: 61747 ttcaggattcagcagtgtcagtaaggacaaga 61778 Score = 56.0 bits (28), Expect = 6e-04 Identities = 124/156 (79%) Strand = Plus / Plus Query: 1739 aggaactattagcattagaagagagaataggattcgtaagtactgctctttctgaagaac 1798 ||||| |||||||||||| ||| |||||||| | || || || ||||||||||| || | Sbjct: 62578 aggaattattagcattaggagacagaataggctctgttagcaccgctctttctgaggagc 62637 Query: 1799 agtttgcgaaatgtatcagaaggcgtttatatagaccagttgctgcaaagggaaacaaaa 1858 | |||| |||||| ||||||| || |||||| |||||| ||| |||| | |||| Sbjct: 62638 aatttgtgaaatgcctcagaagaagtatatatataccagtggctacaaaagcaaacgcgc 62697 Query: 1859 cagccatagatgacatcaaatgcagcatatgccagg 1894 || |||| ||||||||||||||||||||||||| Sbjct: 62698 aagttgtagacgacatcaaatgcagcatatgccagg 62733 Score = 50.1 bits (25), Expect = 0.036 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1589 aggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||| |||| ||||| ||||||||||||||||| || || ||||||||| Sbjct: 62188 aggtattactagctctggacaggattgaacaagaagcagaactgacttatgag 62240
>ref|NM_001064986.1| Oryza sativa (japonica cultivar-group) Os06g0695600 (Os06g0695600) mRNA, complete cds Length = 2646 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1714 atggatattgacaacatgtcctatgaggaactattagcattagaagagagaat 1766 |||||||||||||||||||| |||||||||||||||||| |||| ||| |||| Sbjct: 1782 atggatattgacaacatgtcttatgaggaactattagcactagaggagcgaat 1834 Score = 67.9 bits (34), Expect = 2e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 1567 ataaacatggaaggcattgcagaggtattgctagtgctggagaggattgaacaagaagct 1626 ||||||||||||||||| || ||||| ||||||| |||| |||||||||||||| | | Sbjct: 1635 ataaacatggaaggcatcgctgaggtgttgctagcattggacaggattgaacaagatgat 1694 Query: 1627 gagcttacttatgagcaattgc 1648 || | |||||||||||||||| Sbjct: 1695 gaattgacttatgagcaattgc 1716 Score = 61.9 bits (31), Expect = 9e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1865 tagatgacatcaaatgcagcatatgccaggaggagttcgtgaagggcgaagaggttggca 1924 |||||||| ||| ||||||||||| |||||||| | | | |||||||||| ||||| | Sbjct: 1939 tagatgacgccaagtgcagcatatgtcaggaggaatacattgagggcgaagaagttggta 1998 Query: 1925 ggttgcggtgcgagcaccagtaccatgtgtgctgcattc 1963 || ||| ||| ||||| || |||||||||| |||||||| Sbjct: 1999 ggatgcagtgtgagcatcaataccatgtgtcctgcattc 2037
>dbj|AK066069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058N02, full insert sequence Length = 2646 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1714 atggatattgacaacatgtcctatgaggaactattagcattagaagagagaat 1766 |||||||||||||||||||| |||||||||||||||||| |||| ||| |||| Sbjct: 1783 atggatattgacaacatgtcttatgaggaactattagcactagaggagcgaat 1835 Score = 67.9 bits (34), Expect = 2e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 1567 ataaacatggaaggcattgcagaggtattgctagtgctggagaggattgaacaagaagct 1626 ||||||||||||||||| || ||||| ||||||| |||| |||||||||||||| | | Sbjct: 1636 ataaacatggaaggcatcgctgaggtgttgctagcattggacaggattgaacaagatgat 1695 Query: 1627 gagcttacttatgagcaattgc 1648 || | |||||||||||||||| Sbjct: 1696 gaattgacttatgagcaattgc 1717 Score = 61.9 bits (31), Expect = 9e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 1865 tagatgacatcaaatgcagcatatgccaggaggagttcgtgaagggcgaagaggttggca 1924 |||||||| ||| ||||||||||| |||||||| | | | |||||||||| ||||| | Sbjct: 1940 tagatgacgccaagtgcagcatatgtcaggaggaatacattgagggcgaagaagttggta 1999 Query: 1925 ggttgcggtgcgagcaccagtaccatgtgtgctgcattc 1963 || ||| ||| ||||| || |||||||||| |||||||| Sbjct: 2000 ggatgcagtgtgagcatcaataccatgtgtcctgcattc 2038
>ref|NM_203103.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G24870) mRNA, complete cds Length = 1976 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagaga 1762 |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1427 attgacaacatgtcgtatgaggaactgttagcattagaggaga 1469 Score = 42.1 bits (21), Expect = 8.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1583 ttgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgagc 1642 |||||||||||||| | | ||||| |||||||| ||||| | |||||||| || |||| Sbjct: 1287 ttgcagaggtattgttggccctggaaaggattgagcaagacgaagagcttacatacgagc 1346 Query: 1643 aattg 1647 ||||| Sbjct: 1347 aattg 1351
>ref|NM_122396.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G24870) mRNA, complete cds Length = 2086 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagaga 1762 |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1537 attgacaacatgtcgtatgaggaactgttagcattagaggaga 1579 Score = 42.1 bits (21), Expect = 8.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1583 ttgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgagc 1642 |||||||||||||| | | ||||| |||||||| ||||| | |||||||| || |||| Sbjct: 1397 ttgcagaggtattgttggccctggaaaggattgagcaagacgaagagcttacatacgagc 1456 Query: 1643 aattg 1647 ||||| Sbjct: 1457 aattg 1461
>gb|BT014966.1| Arabidopsis thaliana At5g24870 gene, complete cds Length = 1563 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagaga 1762 |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1237 attgacaacatgtcgtatgaggaactgttagcattagaggaga 1279 Score = 42.1 bits (21), Expect = 8.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1583 ttgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgagc 1642 |||||||||||||| | | ||||| |||||||| ||||| | |||||||| || |||| Sbjct: 1097 ttgcagaggtattgttggccctggaaaggattgagcaagacgaagagcttacatacgagc 1156 Query: 1643 aattg 1647 ||||| Sbjct: 1157 aattg 1161
>gb|AY136427.1| Arabidopsis thaliana RING finger-like protein (At5g24870) mRNA, complete cds Length = 1933 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagaga 1762 |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1384 attgacaacatgtcgtatgaggaactgttagcattagaggaga 1426 Score = 42.1 bits (21), Expect = 8.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1583 ttgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgagc 1642 |||||||||||||| | | ||||| |||||||| ||||| | |||||||| || |||| Sbjct: 1244 ttgcagaggtattgttggccctggaaaggattgagcaagacgaagagcttacatacgagc 1303 Query: 1643 aattg 1647 ||||| Sbjct: 1304 aattg 1308
>emb|BX829402.1|CNS0A1G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZB10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1869 Score = 61.9 bits (31), Expect = 9e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagaga 1762 |||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1366 attgacaacatgtcgtatgaggaactgttagcattagaggaga 1408
>gb|AY106536.1| Zea mays PCO128034 mRNA sequence Length = 814 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 1720 attgacaacatgtcctatgaggaactattagcattagaagagagaatagga 1770 |||||||| |||||||||||||| ||||||||| | || || ||||||||| Sbjct: 177 attgacaatatgtcctatgaggagctattagcactcgaggaaagaatagga 227
>dbj|AK226506.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL06-82-H05 Length = 1284 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 851 aacatgtcatatgaggaactattagctctagaagagag 888
>ref|NM_119294.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT4G31450) mRNA, complete cds Length = 1935 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1285 aacatgtcatatgaggaactattagctctagaagagag 1322
>gb|AF424605.1|AF424605 Arabidopsis thaliana AT4g31450/F3L17_20 mRNA, complete cds Length = 1783 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1287 aacatgtcatatgaggaactattagctctagaagagag 1324
>gb|BT002300.1| Arabidopsis thaliana At4g31450/F3L17_20 mRNA, complete cds Length = 1494 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1171 aacatgtcatatgaggaactattagctctagaagagag 1208
>emb|BX827060.1|CNS0A44Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1827 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1259 aacatgtcatatgaggaactattagctctagaagagag 1296
>emb|BX828405.1|CNS0A3RB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1804 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1239 aacatgtcatatgaggaactattagctctagaagagag 1276
>emb|BX828136.1|CNS0A3TJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1553 Score = 52.0 bits (26), Expect = 0.009 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1726 aacatgtcctatgaggaactattagcattagaagagag 1763 |||||||| ||||||||||||||||| |||||||||| Sbjct: 1198 aacatgtcatatgaggaactattagctctagaagagag 1235
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1714 atggatattgacaacatgtcctatgagg 1741 |||||||||||||||||||| ||||||| Sbjct: 28677340 atggatattgacaacatgtcttatgagg 28677313
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1714 atggatattgacaacatgtcctatgagg 1741 |||||||||||||||||||| ||||||| Sbjct: 77906 atggatattgacaacatgtcttatgagg 77879
>emb|CT829559.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA250H04, full insert sequence Length = 2224 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| || |||||| | ||||| |||| |||| | |||||||| || |||||||||||| Sbjct: 1562 catagagatatgcggctagatatagacagcatgacatatgaggagcttttagcattagaa 1621 Query: 1759 gag 1761 ||| Sbjct: 1622 gag 1624
>emb|CT832310.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208M09, full insert sequence Length = 2640 Score = 46.1 bits (23), Expect = 0.56 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1723 gacaacatgtcctatgaggaactattagcattagaagagagaatagg 1769 ||||||||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct: 2093 gacaacatgtcttatgaggagctattggcactggaagaaagaatagg 2139
>emb|CT832309.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202K22, full insert sequence Length = 2700 Score = 46.1 bits (23), Expect = 0.56 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1723 gacaacatgtcctatgaggaactattagcattagaagagagaatagg 1769 ||||||||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct: 2165 gacaacatgtcttatgaggagctattggcactggaagaaagaatagg 2211
>ref|NM_001060613.1| Oryza sativa (japonica cultivar-group) Os04g0648800 (Os04g0648800) mRNA, complete cds Length = 2637 Score = 46.1 bits (23), Expect = 0.56 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1723 gacaacatgtcctatgaggaactattagcattagaagagagaatagg 1769 ||||||||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct: 2092 gacaacatgtcttatgaggagctattggcactggaagaaagaatagg 2138
>ref|NM_001050345.1| Oryza sativa (japonica cultivar-group) Os01g0667700 (Os01g0667700) mRNA, complete cds Length = 2349 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| || |||||| | ||||| |||| |||| | |||||||| || |||||||||||| Sbjct: 1684 catagagatatgcggctagatatagacagcatgacatatgaggagcttttagcattagaa 1743 Query: 1759 gag 1761 ||| Sbjct: 1744 gag 1746
>ref|NM_001036792.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G10650) mRNA, complete cds Length = 1911 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1230 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1289 Query: 1642 caa 1644 ||| Sbjct: 1290 caa 1292
>ref|NM_121102.4| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc ion binding (AT5G10650) mRNA, complete cds Length = 1895 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1205 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1264 Query: 1642 caa 1644 ||| Sbjct: 1265 caa 1267
>gb|BT015918.1| Arabidopsis thaliana At5g10650 gene, complete cds Length = 1578 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1117 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1176 Query: 1642 caa 1644 ||| Sbjct: 1177 caa 1179
>gb|AY099680.1| Arabidopsis thaliana Pspzf zinc finger protein-like (At5g10650) mRNA, complete cds Length = 1861 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1205 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1264 Query: 1642 caa 1644 ||| Sbjct: 1265 caa 1267
>emb|Z75710.1|CED1081 Caenorhabditis elegans Cosmid D1081, complete sequence Length = 38356 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2061 gaacctgtaaaataaattactat 2083 ||||||||||||||||||||||| Sbjct: 33993 gaacctgtaaaataaattactat 33971
>gb|AC158630.5| Mus musculus 10 BAC RP23-440F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191380 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2172 gccctgtgaagtgtgagctgtga 2194 ||||||||||||||||||||||| Sbjct: 165372 gccctgtgaagtgtgagctgtga 165350
>dbj|AK100301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077P18, full insert sequence Length = 1493 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1876 aaatgcagcatatgccaggagga 1898 ||||||||||||||||||||||| Sbjct: 1107 aaatgcagcatatgccaggagga 1129
>dbj|AK072200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D07, full insert sequence Length = 1363 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1876 aaatgcagcatatgccaggagga 1898 ||||||||||||||||||||||| Sbjct: 1107 aaatgcagcatatgccaggagga 1129
>emb|BX830043.1|CNS0A1JX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1887 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1197 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1256 Query: 1642 caa 1644 ||| Sbjct: 1257 caa 1259
>dbj|AK071468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098C19, full insert sequence Length = 2744 Score = 46.1 bits (23), Expect = 0.56 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1723 gacaacatgtcctatgaggaactattagcattagaagagagaatagg 1769 ||||||||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct: 2199 gacaacatgtcttatgaggagctattggcactggaagaaagaatagg 2245
>dbj|AK069011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G18, full insert sequence Length = 2235 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| || |||||| | ||||| |||| |||| | |||||||| || |||||||||||| Sbjct: 1570 catagagatatgcggctagatatagacagcatgacatatgaggagcttttagcattagaa 1629 Query: 1759 gag 1761 ||| Sbjct: 1630 gag 1632
>dbj|AK067662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G13, full insert sequence Length = 2325 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| || |||||| | ||||| |||| |||| | |||||||| || |||||||||||| Sbjct: 1660 catagagatatgcggctagatatagacagcatgacatatgaggagcttttagcattagaa 1719 Query: 1759 gag 1761 ||| Sbjct: 1720 gag 1722
>dbj|AK067751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L22, full insert sequence Length = 2637 Score = 46.1 bits (23), Expect = 0.56 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1723 gacaacatgtcctatgaggaactattagcattagaagagagaatagg 1769 ||||||||||| |||||||| ||||| ||| | ||||| |||||||| Sbjct: 2092 gacaacatgtcttatgaggagctattggcactggaagaaagaatagg 2138
>dbj|AK059404.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-B09, full insert sequence Length = 694 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1876 aaatgcagcatatgccaggagga 1898 ||||||||||||||||||||||| Sbjct: 438 aaatgcagcatatgccaggagga 460
>gb|AC102657.13| Mus musculus chromosome 10, clone RP23-15N10, complete sequence Length = 186954 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2172 gccctgtgaagtgtgagctgtga 2194 ||||||||||||||||||||||| Sbjct: 101536 gccctgtgaagtgtgagctgtga 101558
>emb|Z36749.1|GMZINCF G.max (Evans) mRNA for zinc-finger protein (C-terminal) Length = 1316 Score = 46.1 bits (23), Expect = 0.56 Identities = 59/71 (83%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| |||||| ||||||| || ||||||||| |||||||||||| | ||| | | | Sbjct: 840 catagagacatgaggatggacatagacaacatgagttatgaggaactacttgcacttgga 899 Query: 1759 gagagaatagg 1769 ||||||||||| Sbjct: 900 gagagaatagg 910
>gb|AF140491.1|AF140491 Oryza sativa hypothetical protein mRNA, partial cds Length = 391 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1699 catagcgacatgcggatggatattgacaacatgtcctatgaggaactattagcattagaa 1758 ||||| || |||||| | ||||| |||| |||| | |||||||| || |||||||||||| Sbjct: 133 catagagatatgcggctagatatagacagcatgacatatgaggagcttttagcattagaa 192 Query: 1759 gag 1761 ||| Sbjct: 193 gag 195
>gb|BT020582.1| Arabidopsis thaliana At5g10650 gene, complete cds Length = 1628 Score = 46.1 bits (23), Expect = 0.56 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1582 attgcagaggtattgctagtgctggagaggattgaacaagaagctgagcttacttatgag 1641 ||||||||||||||| | | ||||| ||||||||||| || | |||||||| |||||| Sbjct: 1124 attgcagaggtattgttggccctggaaaggattgaacatgatgaagagcttacatatgag 1183 Query: 1642 caa 1644 ||| Sbjct: 1184 caa 1186
>gb|AC191763.3| Pan troglodytes BAC clone CH251-311D11 from chromosome x, complete sequence Length = 169533 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 99191 atggctcttccagatcaagatt 99212
>ref|NM_001076729.1| Danio rerio zgc:152857 (zgc:152857), mRNA gb|BC124157.1| Danio rerio zgc:152857, mRNA (cDNA clone MGC:152857 IMAGE:8147912), complete cds Length = 1439 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 198 aaatcgaagccctgaagagaca 177
>ref|XM_521210.2| PREDICTED: Pan troglodytes hypothetical LOC465797, transcript variant 4 (LOC465797), mRNA Length = 6973 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 381 atggctcttccagatcaagatt 360
>ref|XM_001143980.1| PREDICTED: Pan troglodytes hypothetical LOC465797, transcript variant 3 (LOC465797), mRNA Length = 6973 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 381 atggctcttccagatcaagatt 360
>ref|XM_001143829.1| PREDICTED: Pan troglodytes hypothetical LOC465797, transcript variant 2 (LOC465797), mRNA Length = 1458 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 381 atggctcttccagatcaagatt 360
>ref|XM_001143742.1| PREDICTED: Pan troglodytes hypothetical LOC465797, transcript variant 1 (LOC465797), mRNA Length = 2639 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 381 atggctcttccagatcaagatt 360
>ref|XM_001090056.1| PREDICTED: Macaca mulatta similar to CG30327-PA (LOC701761), mRNA Length = 2844 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 588 atggctcttccagatcaagatt 567
>gb|AF112374.1| Danio rerio odorant receptor gene cluster Length = 140658 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 139916 aaatcgaagccctgaagagaca 139937
>ref|NM_018301.2| Homo sapiens RNA binding motif protein 41 (RBM41), mRNA gb|BC006986.1| Homo sapiens RNA binding motif protein 41, mRNA (cDNA clone MGC:12215 IMAGE:3995903), complete cds Length = 1689 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 334 atggctcttccagatcaagatt 313
>ref|NM_131751.1| Danio rerio odorant receptor, family 4, member 1 (or4.1), mRNA Length = 945 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 62 aaatcgaagccctgaagagaca 41
>gb|BT013598.1| Lycopersicon esculentum clone 132362R, mRNA sequence Length = 2609 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1721 ttgacaacatgtcctatgaggaacta 1746 |||| ||||||||||||||||||||| Sbjct: 2019 ttgataacatgtcctatgaggaacta 2044
>dbj|AK023732.1| Homo sapiens cDNA FLJ13670 fis, clone PLACE1011725 Length = 2461 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 353 atggctcttccagatcaagatt 332
>dbj|AK001878.1| Homo sapiens cDNA FLJ11016 fis, clone PLACE1003334 Length = 2579 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 330 atggctcttccagatcaagatt 309
>emb|AL390039.10| Human DNA sequence from clone RP13-383K5 on chromosome Xq22.1-24 Contains gene FLJ11016, the 3' end of gene FLJ20130, the 3' end of a eukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a novel pseudogene, complete sequence Length = 162579 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 83302 atggctcttccagatcaagatt 83323
>gb|BC095006.1| Danio rerio cDNA clone IMAGE:7228643 Length = 1446 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 198 aaatcgaagccctgaagagaca 177
>emb|CR859576.1| Pongo pygmaeus mRNA; cDNA DKFZp468A085 (from clone DKFZp468A085) Length = 3165 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 atggctcttccagatcaagatt 1112 |||||||||||||||||||||| Sbjct: 336 atggctcttccagatcaagatt 315
>dbj|AK069287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010H14, full insert sequence Length = 2355 Score = 44.1 bits (22), Expect = 2.2 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1708 atgcggatggatattgacaacatgtcctatgaggaactattagcattagaagag 1761 |||||| | ||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 1699 atgcggctagatatagacagcatgacatatgaggagcttttagcattagaagag 1752
>emb|BX005122.10| Zebrafish DNA sequence from clone CH211-134D11, complete sequence Length = 184142 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2145 cagtttgtgaatgtcaaatgga 2166 |||||||||||||||||||||| Sbjct: 39118 cagtttgtgaatgtcaaatgga 39139
>ref|NM_001039622.1| Danio rerio odorant receptor (or119-2), mRNA gb|DQ306091.1| Danio rerio odorant receptor (OR119-2) gene, complete cds Length = 945 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 62 aaatcgaagccctgaagagaca 41
>gb|DQ306090.1| Danio rerio odorant receptor (OR119-1) gene, complete cds Length = 945 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 62 aaatcgaagccctgaagagaca 41
>emb|AL845428.5| Zebrafish DNA sequence from clone CH211-133D24 in linkage group 20, complete sequence Length = 157787 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 8653 aaatcgaagccctgaagagaca 8632 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 aaatcgaagccctgaagagaca 369 |||||||||||||||||||||| Sbjct: 13746 aaatcgaagccctgaagagaca 13725
>gb|AC188432.3| Pan troglodytes BAC clone CH251-676M19 from chromosome 7, complete sequence Length = 202108 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 aaatttccccttagaaaattt 546 ||||||||||||||||||||| Sbjct: 99146 aaatttccccttagaaaattt 99126
>ref|XR_022805.1| PREDICTED: Pan troglodytes hypothetical LOC469577 (LOC469577), mRNA Length = 846 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 ccaaatttcctaagaaatttc 532 ||||||||||||||||||||| Sbjct: 326 ccaaatttcctaagaaatttc 306
>gb|AC122563.8| Mus musculus chromosome 1, clone RP24-208F6, complete sequence Length = 180825 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 935 catatggtcttgttagtggag 955 ||||||||||||||||||||| Sbjct: 140379 catatggtcttgttagtggag 140359
>gb|BT018207.1| Zea mays clone EL01N0560C03.c mRNA sequence Length = 928 Score = 42.1 bits (21), Expect = 8.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1717 gatattgacaacatgtcctatgaggaactattagcattagaagag 1761 ||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 777 gatatagacagcatgacgtatgaggagcttttagcattagaagag 821
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggccccgccggcgctcgcgcgctc 135 ||||| ||||||||||||||||||| Sbjct: 3155929 cggccgcgccggcgctcgcgcgctc 3155905
>ref|XM_549173.2| PREDICTED: Canis familiaris similar to CG30327-PA (LOC492053), mRNA Length = 1937 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1092 tggctcttccagatcaagatt 1112 ||||||||||||||||||||| Sbjct: 614 tggctcttccagatcaagatt 594
>gb|AC004970.2| Homo sapiens BAC clone RP5-1122F4 from 7, complete sequence Length = 149951 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cccgccggcgctcgcgcgctc 135 ||||||||||||||||||||| Sbjct: 122046 cccgccggcgctcgcgcgctc 122066
>gb|AC147158.3| Pan troglodytes BAC clone CH251-137M10 from Y, complete sequence Length = 167138 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 673 gctccacagactgagacagaaggat 697 |||||| |||||||||||||||||| Sbjct: 58182 gctccagagactgagacagaaggat 58158
>ref|XM_547472.1| PREDICTED: Canis familiaris similar to Y74C9A.3 (LOC490351), mRNA Length = 852 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 513 caaatttcctaagaaatttcc 533 ||||||||||||||||||||| Sbjct: 325 caaatttcctaagaaatttcc 305
>gb|AC004740.1| Homo sapiens PAC clone RP4-631B17 from 7, complete sequence Length = 127270 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 522 taagaaatttccccttagaaaattt 546 ||||||||||| ||||||||||||| Sbjct: 49326 taagaaatttctccttagaaaattt 49302
>ref|XM_939434.1| PREDICTED: Homo sapiens chromosome 1 open reading frame 184 (C1orf184), mRNA Length = 846 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 ccaaatttcctaagaaatttc 532 ||||||||||||||||||||| Sbjct: 326 ccaaatttcctaagaaatttc 306
>ref|XM_089281.4| PREDICTED: Homo sapiens chromosome 1 open reading frame 184 (C1orf184), mRNA Length = 846 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 512 ccaaatttcctaagaaatttc 532 ||||||||||||||||||||| Sbjct: 326 ccaaatttcctaagaaatttc 306
>gb|AC104108.3| Homo sapiens chromosome 5 clone CTD-2037K23, complete sequence Length = 156572 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 680 agactgagacagaaggattaa 700 ||||||||||||||||||||| Sbjct: 88606 agactgagacagaaggattaa 88626
>gb|AC099052.2| Homo sapiens chromosome 3 clone RP11-437M11, complete sequence Length = 139280 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1382 tggaagagggttcttcagaac 1402 ||||||||||||||||||||| Sbjct: 29571 tggaagagggttcttcagaac 29591
>dbj|BS000641.4| Pan troglodytes chromosome Y clone: PTB-094I22, complete sequence Length = 190308 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 673 gctccacagactgagacagaaggat 697 |||||| |||||||||||||||||| Sbjct: 87984 gctccagagactgagacagaaggat 88008
>gb|AC131708.3| Mus musculus BAC clone RP24-127P5 from chromosome 6, complete sequence Length = 185214 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1233 tattcaggattcagcagtatc 1253 ||||||||||||||||||||| Sbjct: 149081 tattcaggattcagcagtatc 149061
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 cggccccgccggcgctcgcgcgctc 135 ||||| ||||||||||||||||||| Sbjct: 1299629 cggccgcgccggcgctcgcgcgctc 1299653
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 111 cggccccgccggcgctcgcgcgctc 135 ||||| ||||||||||||||||||| Sbjct: 1333281 cggccgcgccggcgctcgcgcgctc 1333257
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1618 caagaagctgagcttacttat 1638 ||||||||||||||||||||| Sbjct: 13050 caagaagctgagcttacttat 13030
>gb|AC022415.5|AC022415 Homo sapiens chromosome 19 clone CTC-359D24, complete sequence Length = 180510 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 817 gaaacacatagacagaagaat 837 ||||||||||||||||||||| Sbjct: 134927 gaaacacatagacagaagaat 134947
>gb|AC010169.8| Homo sapiens 3 BAC RP11-424L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111951 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1382 tggaagagggttcttcagaac 1402 ||||||||||||||||||||| Sbjct: 42130 tggaagagggttcttcagaac 42110
>dbj|AP006143.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16L07, TM0254, complete sequence Length = 118592 Score = 42.1 bits (21), Expect = 8.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1717 gatattgacaacatgtcctatgagg 1741 |||||||| |||||||||||||||| Sbjct: 98275 gatattgataacatgtcctatgagg 98251
>gb|AF083817.1|HSDRA2S01 Homo sapiens dihydropyridine receptor alpha 2 subunit (CACNA2D1) gene, exon 1 Length = 644 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 cccgccggcgctcgcgcgctc 135 ||||||||||||||||||||| Sbjct: 186 cccgccggcgctcgcgcgctc 166
>gb|AY104424.1| Zea mays PCO061312 mRNA sequence Length = 1386 Score = 42.1 bits (21), Expect = 8.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 1717 gatattgacaacatgtcctatgaggaactattagcattagaagag 1761 ||||| |||| |||| | |||||||| || ||||||||||||||| Sbjct: 1070 gatatagacagcatgacgtatgaggagcttttagcattagaagag 1114
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2068 taaaataaattactatgcgat 2088 ||||||||||||||||||||| Sbjct: 130847 taaaataaattactatgcgat 130867
>gb|U20824.1|EHVU20824 Equine herpesvirus 2, complete genome Length = 184427 Score = 42.1 bits (21), Expect = 8.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 514 aaatttcctaagaaatttccccttagaaaattt 546 |||||||| |||||||||||| ||| ||||||| Sbjct: 161016 aaatttccaaagaaatttcccattaaaaaattt 160984
>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence Length = 201846 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1227 cagaaatattcaggattcagc 1247 ||||||||||||||||||||| Sbjct: 136770 cagaaatattcaggattcagc 136790
>dbj|AB065669.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_232 Length = 33963 Score = 42.1 bits (21), Expect = 8.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1382 tggaagagggttcttcagaac 1402 ||||||||||||||||||||| Sbjct: 8928 tggaagagggttcttcagaac 8948 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 397,142,317 Number of extensions: 20500133 Number of successful extensions: 97979 Number of sequences better than 10.0: 93 Number of HSP's gapped: 97977 Number of HSP's successfully gapped: 132 Length of query: 2276 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2253 Effective length of database: 18,503,978,556 Effective search space: 41689463686668 Effective search space used: 41689463686668 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)