ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31p15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK068301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146O05, full insert sequence Length = 2115 Score = 658 bits (332), Expect = 0.0 Identities = 830/996 (83%) Strand = Plus / Plus Query: 874 attggggttcaatttacggatgagaatggcgggcaccatcaagcctttctcagccagaag 933 ||||| ||| |||| | |||||||||||| ||||| || || ||||| || | || || Sbjct: 911 attggtgttgaattcaaggatgagaatggggggcagcagcatgccttccttacccgaaac 970 Query: 934 agaggcagtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatc 993 |||| ||| ||||| || ||||||| || |||||||| || |||||||| || ||| | Sbjct: 971 agagacagcgagattatcatctctgctggtgcaattggcagtccccagctattgttgctt 1030 Query: 994 agcggcattggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaac 1053 || || |||||||| | | |||||||| |||||||||||| || |||| |||| |||| Sbjct: 1031 agtggaattggacccagaaaggaacttaaaaagcataacatttctgtagtccttcgcaac 1090 Query: 1054 gaacacgtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaag 1113 ||||| |||||||||||||||||||| || ||| ||| ||| | |||||||| |||||| Sbjct: 1091 gaacatgtgggtaaagggatgtcagataatccaatgaattccatctttatacctaccaag 1150 Query: 1114 gatcccccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatc 1173 ||| |||| |||||||| || ||| |||||||||||||||| || | || | ||| || Sbjct: 1151 gatgcccctaagcaatcactgattcagactgttggaataaccgacggcggggcgttcata 1210 Query: 1174 gaagccagcagcggttttggccagacaggggagagcatccactgccaccatggaatcatg 1233 ||||||||||| ||||| ||||| || || || ||||| |||||||||||||||||| Sbjct: 1211 gaagccagcagtggtttcagccagtcaccagatagtatccagtgccaccatggaatcatg 1270 Query: 1234 tctgctgagattgggcagttgtcgacgattcctccaaaggagagaagtttagaagcagtc 1293 || ||||||||||||||| |||| |||||||| |||||| | |||| | |||| |||||| Sbjct: 1271 tccgctgagattgggcagctgtcaacgattcccccaaagcaaagaaatctagatgcagtc 1330 Query: 1294 cgtaagtatgtacgtaacaaaaatagcctacccaaagaagtattccatggagggtttatt 1353 |||||||||| ||| ||| ||| ||||||||||||||||||| ||| || ||||| Sbjct: 1331 aagaagtatgtacataaaaaatataacctacccaaagaagtattcagtgggggttttata 1390 Query: 1354 ctttcgaagattgatggcccgttgtctactggtaatctagttcttgtggatactgatccc 1413 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct: 1391 ctttcgaagattgatggtccattgtctactggtaatctagttcttgtggatactgacatc 1450 Query: 1414 aacagcaatcctaaggtcaccttcaactacttcaaccatccacaggatctgagacgatgt 1473 || ||||| || | ||| ||||||||||||||| | || ||| ||||||| || || ||| Sbjct: 1451 aatagcaaccccacggttaccttcaactacttccagcacccaaaggatctcagtcggtgt 1510 Query: 1474 gtttacgggatcaagaccatagagagaatagttagtacaaacactttctcaaactttact 1533 || || |||||||||||||||||||||||| | | |||||| |||| | || ||||| Sbjct: 1511 gtctatgggatcaagaccatagagagaatactgaagacaaaccatttcactaattttacc 1570 Query: 1534 cccaaagatggtggatattcaatggaaaaactgctcaacatgagtgtagcagctaacata 1593 | ||| | |||||||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 1571 ctcaatggtggtggatatccaatggaagtggtgctcaacatgagtgtaacagcaaacata 1630 Query: 1594 aacctgataccgaagcacacaaatgacagcacatccttggagcagttttgcagggataca 1653 ||| ||||||| |||||||||||||||||||||||| |||||||||||||||| || ||| Sbjct: 1631 aacttgatacccaagcacacaaatgacagcacatccatggagcagttttgcagagacaca 1690 Query: 1654 gtggtcaccatctggcattaccatggtgggtgccatgtaggcaaggtggttgaccaacag 1713 |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 1691 gtggtcaccatctggcattaccatggcggatgccatgtgggcaaggtggttgaccaacaa 1750 Query: 1714 tacaaagttattggcgcctcaggcctccgggtaattgacggatcaaccctatccaggtcg 1773 ||| || ||||| | ||||||||| || || || || || || ||| ||| ||||| Sbjct: 1751 taccgtgtgattggtgtctcaggccttcgtgtgatcgatgggtcgaccttatttaggtca 1810 Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagatc 1833 |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1811 ccaggaaccaacccgcaagccacagtcatgatgatgggcagatacatgggagtgaagatt 1870 Query: 1834 ttaagggaaaggttaggacgagcggctggagtataa 1869 |||| | ||| ||||||||||| |||||||||||| Sbjct: 1871 ctaagaggaagattaggacgagctgctggagtataa 1906 Score = 654 bits (330), Expect = 0.0 Identities = 630/730 (86%) Strand = Plus / Plus Query: 113 caatgggtttgatcagcggaggggtgttcttcaagatcttggcgttcctctgcttcatca 172 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 150 caatgggtttgatcaatagaggggtcttcttcaagatcttggccttcctctgcttcatca 209 Query: 173 gattatctcaaggaagaaaccattccgcatcaccggatctccctcccctccggaaggcaa 232 ||| ||||||||||||||| |||| | || ||||||||||||||| | |||||||| Sbjct: 210 gatcatctcaaggaagaaatcattttaccacattggatctccctcccctactgaaggcaa 269 Query: 233 gcagtttctccaaaatccagcatgaggcgtatgactacatcattgtcggcggaggcacgg 292 |||||||||||| ||| ||||||||||| ||||||||||||||||| || || ||||| | Sbjct: 270 gcagtttctccagaatacagcatgaggcatatgactacatcattgttggaggtggcacag 329 Query: 293 ccggatgcccattggccgcaacgctgtcgaagaagtacaaggtgctcttgcttgagagag 352 | |||||||||||||| |||||| |||| |||||||||||||||||||||| || |||| Sbjct: 330 ctggatgcccattggcagcaacgttgtcccagaagtacaaggtgctcttgctggaaagag 389 Query: 353 gtggatctccatatggcaaccgcaacatctcataccttgagaacttccacatttgcttga 412 | || ||||| || |||||||| ||||||||| | |||||||||||||||||||||||| Sbjct: 390 gagggtctccttacggcaaccggaacatctcacatcttgagaacttccacatttgcttgg 449 Query: 413 ccgatcaatcgaagaattccccatctcagggattcatctccactgatggtgtcatcaatg 472 | ||| | ||| ||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 450 cagatgactcgccaaattcaccatctcagggatttatctccactgatggtgtcatcaatg 509 Query: 473 cccgagcaaaggttctaggtggaggaacatgtatcaatgccggcttctacagccgagcca 532 |||| ||||||||||||||||| ||||| || ||||||| || |||||||||||||| Sbjct: 510 cccgggcaaaggttctaggtggtggaactagtgtcaatgctggtttctacagccgagctg 569 Query: 533 accgaagatttgtgcaggatgcaggatgggatgaagagttggtgaatcagtcctacccct 592 ||| ||| ||||| || || ||||| ||||||| ||||||||| || || || ||||| | Sbjct: 570 acccaagctttgttcaagacgcaggctgggatgcagagttggtaaaccaatcgtaccctt 629 Query: 593 gggtcgaagagaggattgtttattggccaaagattgcgccttggcaagccgcccttcgtg 652 || ||||||||||||||||||||||||| || ||| | || |||||||| || || || | Sbjct: 630 ggatcgaagagaggattgtttattggcccaatattacaccgtggcaagctgcactgcggg 689 Query: 653 atggtctgcttgaagcaggggtatcgccttacaatggatatacctatgaccatctctttg 712 | || ||||||||||||||||| || |||||||||||||| | |||||| |||||||||| Sbjct: 690 acgggctgcttgaagcaggggtctcaccttacaatggatacagctatgatcatctctttg 749 Query: 713 gaaccaaagttgggggaaccatctttgatgaggctgggtaccggcacactgctgctgacc 772 |||| || || |||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 750 gaacaaaggtcgggggaacaatctttgatgaggctgggtacaggcacactgctgctgacc 809 Query: 773 tcttagctgctgcaaatcctaacaacctcaaagtgctgcttcatgctagtgtgaacaaaa 832 || | ||||||| ||||| ||||||||||| || || |||||||||||||||| || || Sbjct: 810 tccttgctgctggaaatcataacaacctcagggttctccttcatgctagtgtgaccagaa 869 Query: 833 taatgttcaa 842 |||| ||||| Sbjct: 870 taattttcaa 879 Score = 54.0 bits (27), Expect = 0.002 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 1904 atgtaagaatgtgacttagg---agagaagtaaatagtaatttttgaag 1949 |||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 1930 atgtaagaatgtgacttaggaaaagaaaagtatatagtaatttttgaag 1978
>ref|NM_001068292.1| Oryza sativa (japonica cultivar-group) Os08g0401500 (Os08g0401500) mRNA, complete cds Length = 2112 Score = 654 bits (330), Expect = 0.0 Identities = 630/730 (86%) Strand = Plus / Plus Query: 113 caatgggtttgatcagcggaggggtgttcttcaagatcttggcgttcctctgcttcatca 172 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 147 caatgggtttgatcaatagaggggtcttcttcaagatcttggccttcctctgcttcatca 206 Query: 173 gattatctcaaggaagaaaccattccgcatcaccggatctccctcccctccggaaggcaa 232 ||| ||||||||||||||| |||| | || ||||||||||||||| | |||||||| Sbjct: 207 gatcatctcaaggaagaaatcattttaccacattggatctccctcccctactgaaggcaa 266 Query: 233 gcagtttctccaaaatccagcatgaggcgtatgactacatcattgtcggcggaggcacgg 292 |||||||||||| ||| ||||||||||| ||||||||||||||||| || || ||||| | Sbjct: 267 gcagtttctccagaatacagcatgaggcatatgactacatcattgttggaggtggcacag 326 Query: 293 ccggatgcccattggccgcaacgctgtcgaagaagtacaaggtgctcttgcttgagagag 352 | |||||||||||||| |||||| |||| |||||||||||||||||||||| || |||| Sbjct: 327 ctggatgcccattggcagcaacgttgtcccagaagtacaaggtgctcttgctggaaagag 386 Query: 353 gtggatctccatatggcaaccgcaacatctcataccttgagaacttccacatttgcttga 412 | || ||||| || |||||||| ||||||||| | |||||||||||||||||||||||| Sbjct: 387 gagggtctccttacggcaaccggaacatctcacatcttgagaacttccacatttgcttgg 446 Query: 413 ccgatcaatcgaagaattccccatctcagggattcatctccactgatggtgtcatcaatg 472 | ||| | ||| ||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 447 cagatgactcgccaaattcaccatctcagggatttatctccactgatggtgtcatcaatg 506 Query: 473 cccgagcaaaggttctaggtggaggaacatgtatcaatgccggcttctacagccgagcca 532 |||| ||||||||||||||||| ||||| || ||||||| || |||||||||||||| Sbjct: 507 cccgggcaaaggttctaggtggtggaactagtgtcaatgctggtttctacagccgagctg 566 Query: 533 accgaagatttgtgcaggatgcaggatgggatgaagagttggtgaatcagtcctacccct 592 ||| ||| ||||| || || ||||| ||||||| ||||||||| || || || ||||| | Sbjct: 567 acccaagctttgttcaagacgcaggctgggatgcagagttggtaaaccaatcataccctt 626 Query: 593 gggtcgaagagaggattgtttattggccaaagattgcgccttggcaagccgcccttcgtg 652 || ||||||||||||||||||||||||| || ||| | || |||||||| || || || | Sbjct: 627 ggatcgaagagaggattgtttattggcccaatattacaccgtggcaagctgcactgcggg 686 Query: 653 atggtctgcttgaagcaggggtatcgccttacaatggatatacctatgaccatctctttg 712 | || ||||||||||||||||| || |||||||||||||| | |||||| |||||||||| Sbjct: 687 acgggctgcttgaagcaggggtctcaccttacaatggatacagctatgatcatctctttg 746 Query: 713 gaaccaaagttgggggaaccatctttgatgaggctgggtaccggcacactgctgctgacc 772 |||| || || |||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 747 gaacaaaggtcgggggaacaatctttgatgaggctgggtacaggcacactgctgctgacc 806 Query: 773 tcttagctgctgcaaatcctaacaacctcaaagtgctgcttcatgctagtgtgaacaaaa 832 || | ||||||| ||||| ||||||||||| || || |||||||||||||||| || || Sbjct: 807 tccttgctgctggaaatcataacaacctcagggttctccttcatgctagtgtgaccagaa 866 Query: 833 taatgttcaa 842 |||| ||||| Sbjct: 867 taattttcaa 876 Score = 650 bits (328), Expect = 0.0 Identities = 829/996 (83%) Strand = Plus / Plus Query: 874 attggggttcaatttacggatgagaatggcgggcaccatcaagcctttctcagccagaag 933 ||||| ||| |||| | |||||||||||| ||||| || || ||||| || | || || Sbjct: 908 attggtgttgaattcaaggatgagaatggggggcagcagcatgccttccttacccgaaac 967 Query: 934 agaggcagtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatc 993 |||| ||| ||||| || ||||||| || |||||||| || |||||||| || ||| | Sbjct: 968 agagacagcgagattatcatctctgctggtgcaattggcagtccccagctattgttgctt 1027 Query: 994 agcggcattggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaac 1053 || || |||||||| | | |||||||| |||||||||||| || |||| |||| |||| Sbjct: 1028 agtggaattggacccagaaaggaacttaaaaagcataacatttctgtagtccttcgcaac 1087 Query: 1054 gaacacgtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaag 1113 ||||| |||||||||||||||||||| || ||| ||| ||| | |||||||| |||||| Sbjct: 1088 gaacatgtgggtaaagggatgtcagataatccaatgaattccatctttatacctaccaag 1147 Query: 1114 gatcccccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatc 1173 ||| |||| |||||||| || ||| |||||||||||||||| || | || | ||| || Sbjct: 1148 gatgcccctaagcaatcactgattcagactgttggaataaccgacggcggggcgttcata 1207 Query: 1174 gaagccagcagcggttttggccagacaggggagagcatccactgccaccatggaatcatg 1233 ||||||||||| ||||| ||||| || || || ||||| |||||||||||||||||| Sbjct: 1208 gaagccagcagtggtttcagccagtcaccagatagtatccagtgccaccatggaatcatg 1267 Query: 1234 tctgctgagattgggcagttgtcgacgattcctccaaaggagagaagtttagaagcagtc 1293 || ||||||||||||||| |||| |||||||| |||||| | |||| | |||| |||||| Sbjct: 1268 tccgctgagattgggcagctgtcaacgattcccccaaagcaaagaaatctagatgcagtc 1327 Query: 1294 cgtaagtatgtacgtaacaaaaatagcctacccaaagaagtattccatggagggtttatt 1353 |||||||||| ||| ||| ||| ||||||||||||||||||| ||| || ||||| Sbjct: 1328 aagaagtatgtacataaaaaatataacctacccaaagaagtattcagtgggggttttata 1387 Query: 1354 ctttcgaagattgatggcccgttgtctactggtaatctagttcttgtggatactgatccc 1413 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | Sbjct: 1388 ctttcgaagattgatggtccattgtctactggtaatctagttcttgtggatactgacatc 1447 Query: 1414 aacagcaatcctaaggtcaccttcaactacttcaaccatccacaggatctgagacgatgt 1473 || ||||| || | ||| ||||||||||||||| | || ||| ||||||| || || ||| Sbjct: 1448 aatagcaaccccacggttaccttcaactacttccagcacccaaaggatctcagtcggtgt 1507 Query: 1474 gtttacgggatcaagaccatagagagaatagttagtacaaacactttctcaaactttact 1533 || || |||||||||||||||||||||||| | | |||||| |||| | || ||||| Sbjct: 1508 gtctatgggatcaagaccatagagagaatactgaagacaaaccatttcactaattttacc 1567 Query: 1534 cccaaagatggtggatattcaatggaaaaactgctcaacatgagtgtagcagctaacata 1593 | ||| | |||||||||| |||||||| ||||||||||||||||| |||| |||||| Sbjct: 1568 ctcaatggtggtggatatccaatggaagtggtgctcaacatgagtgtaacagcaaacata 1627 Query: 1594 aacctgataccgaagcacacaaatgacagcacatccttggagcagttttgcagggataca 1653 ||| ||||||| |||||||||||||||||||||||| |||||||||||||||| || ||| Sbjct: 1628 aacttgatacccaagcacacaaatgacagcacatccatggagcagttttgcagagacaca 1687 Query: 1654 gtggtcaccatctggcattaccatggtgggtgccatgtaggcaaggtggttgaccaacag 1713 |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 1688 gtggtcaccatctggcattaccatggcggatgccatgtgggcaaggtggttgaccaacaa 1747 Query: 1714 tacaaagttattggcgcctcaggcctccgggtaattgacggatcaaccctatccaggtcg 1773 ||| || ||||| | ||||||||| || || || || || || ||| ||| ||||| Sbjct: 1748 taccgtgtgattggtgtctcaggccttcgtgtgatcgatgggtcgaccttatttaggtca 1807 Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagatc 1833 |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1808 ccaggaaccaacccgcaagccacagtcatgatgatgggcagatacatgggagtgaagatt 1867 Query: 1834 ttaagggaaaggttaggacgagcggctggagtataa 1869 |||| ||| ||||||||||| |||||||||||| Sbjct: 1868 ctaagaagaagattaggacgagctgctggagtataa 1903 Score = 54.0 bits (27), Expect = 0.002 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Plus Query: 1904 atgtaagaatgtgacttagg---agagaagtaaatagtaatttttgaag 1949 |||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 1927 atgtaagaatgtgacttaggaaaagaaaagtatatagtaatttttgaag 1975
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 448 bits (226), Expect = e-122 Identities = 487/574 (84%) Strand = Plus / Minus Query: 1241 agattgggcagttgtcgacgattcctccaaaggagagaagtttagaagcagtccgtaagt 1300 ||||||||||| |||| |||||||| |||||| | |||| | |||| |||||| |||| Sbjct: 19150898 agattgggcagctgtcaacgattcccccaaagcaaagaaatctagatgcagtcaagaagt 19150839 Query: 1301 atgtacgtaacaaaaatagcctacccaaagaagtattccatggagggtttattctttcga 1360 |||||| ||| ||| ||| ||||||||||||||||||| ||| || ||||| ||||||| Sbjct: 19150838 atgtacataaaaaatataacctacccaaagaagtattcagtgggggttttatactttcga 19150779 Query: 1361 agattgatggcccgttgtctactggtaatctagttcttgtggatactgatcccaacagca 1420 |||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 19150778 agattgatggtccattgtctactggtaatctagttcttgtggatactgacatcaatagca 19150719 Query: 1421 atcctaaggtcaccttcaactacttcaaccatccacaggatctgagacgatgtgtttacg 1480 | || | ||| ||||||||||||||| | || ||| ||||||| || || ||||| || | Sbjct: 19150718 accccacggttaccttcaactacttccagcacccaaaggatctcagtcggtgtgtctatg 19150659 Query: 1481 ggatcaagaccatagagagaatagttagtacaaacactttctcaaactttactcccaaag 1540 ||||||||||||||||||||||| | | |||||| |||| | || ||||| | ||| | Sbjct: 19150658 ggatcaagaccatagagagaatactgaagacaaaccatttcactaattttaccctcaatg 19150599 Query: 1541 atggtggatattcaatggaaaaactgctcaacatgagtgtagcagctaacataaacctga 1600 |||||||||| |||||||| ||||||||||||||||| |||| ||||||||| ||| Sbjct: 19150598 gtggtggatatccaatggaagtggtgctcaacatgagtgtaacagcaaacataaacttga 19150539 Query: 1601 taccgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtca 1660 |||| |||||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 19150538 tacccaagcacacaaatgacagcacatccatggagcagttttgcagagacacagtggtca 19150479 Query: 1661 ccatctggcattaccatggtgggtgccatgtaggcaaggtggttgaccaacagtacaaag 1720 ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| | Sbjct: 19150478 ccatctggcattaccatggcggatgccatgtgggcaaggtggttgaccaacaataccgtg 19150419 Query: 1721 ttattggcgcctcaggcctccgggtaattgacggatcaaccctatccaggtcgccaggaa 1780 | ||||| | ||||||||| || || || || || || ||| ||| ||||| ||||||| Sbjct: 19150418 tgattggtgtctcaggccttcgtgtgatcgatgggtcgaccttatttaggtcaccaggaa 19150359 Query: 1781 caaacccacaagccacagtcatgatgatgggcag 1814 | ||||| |||||||||||||||||||||||||| Sbjct: 19150358 ccaacccgcaagccacagtcatgatgatgggcag 19150325 Score = 333 bits (168), Expect = 1e-87 Identities = 285/324 (87%) Strand = Plus / Minus Query: 207 ggatctccctcccctccggaaggcaagcagtttctccaaaatccagcatgaggcgtatga 266 ||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 19153783 ggatctccctcccctactgaaggcaagcagtttctccagaatacagcatgaggcatatga 19153724 Query: 267 ctacatcattgtcggcggaggcacggccggatgcccattggccgcaacgctgtcgaagaa 326 |||||||||||| || || ||||| || |||||||||||||| |||||| |||| |||| Sbjct: 19153723 ctacatcattgttggaggtggcacagctggatgcccattggcagcaacgttgtcccagaa 19153664 Query: 327 gtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctcata 386 |||||||||||||||||| || ||||| || ||||| || |||||||| ||||||||| | Sbjct: 19153663 gtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctcaca 19153604 Query: 387 ccttgagaacttccacatttgcttgaccgatcaatcgaagaattccccatctcagggatt 446 |||||||||||||||||||||||| | ||| | ||| ||||| |||||||||||||| Sbjct: 19153603 tcttgagaacttccacatttgcttggcagatgactcgccaaattcaccatctcagggatt 19153544 Query: 447 catctccactgatggtgtcatcaatgcccgagcaaaggttctaggtggaggaacatgtat 506 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 19153543 tatctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgt 19153484 Query: 507 caatgccggcttctacagccgagc 530 |||||| || |||||||||||||| Sbjct: 19153483 caatgctggtttctacagccgagc 19153460 Score = 258 bits (130), Expect = 7e-65 Identities = 250/290 (86%) Strand = Plus / Minus Query: 553 gcaggatgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtt 612 ||||| ||||||| ||||||||| || || || ||||| ||| ||||||||||||||||| Sbjct: 19152150 gcaggctgggatgcagagttggtaaaccaatcatacccttggatcgaagagaggattgtt 19152091 Query: 613 tattggccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggg 672 |||||||| || ||| | || |||||||| || || || || || ||||||||||||||| Sbjct: 19152090 tattggcccaatattacaccgtggcaagctgcactgcgggacgggctgcttgaagcaggg 19152031 Query: 673 gtatcgccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaacc 732 || || |||||||||||||| | |||||| |||||||||||||| || || |||||||| Sbjct: 19152030 gtctcaccttacaatggatacagctatgatcatctctttggaacaaaggtcgggggaaca 19151971 Query: 733 atctttgatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcct 792 ||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||| | Sbjct: 19151970 atctttgatgaggctgggtacaggcacactgctgctgacctccttgctgctggaaatcat 19151911 Query: 793 aacaacctcaaagtgctgcttcatgctagtgtgaacaaaataatgttcaa 842 |||||||||| || || |||||||||||||||| || |||||| ||||| Sbjct: 19151910 aacaacctcagggttctccttcatgctagtgtgaccagaataattttcaa 19151861 Score = 161 bits (81), Expect = 1e-35 Identities = 297/369 (80%) Strand = Plus / Minus Query: 874 attggggttcaatttacggatgagaatggcgggcaccatcaagcctttctcagccagaag 933 ||||| ||| |||| | |||||||||||| ||||| || || ||||| || | || || Sbjct: 19151742 attggtgttgaattcaaggatgagaatggggggcagcagcatgccttccttacccgaaac 19151683 Query: 934 agaggcagtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatc 993 |||| ||| ||||| || ||||||| || |||||||| || |||||||| || ||| | Sbjct: 19151682 agagacagcgagattatcatctctgctggtgcaattggcagtccccagctattgttgctt 19151623 Query: 994 agcggcattggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaac 1053 || || |||||||| | | |||||||| |||||||||||| || |||| |||| |||| Sbjct: 19151622 agtggaattggacccagaaaggaacttaaaaagcataacatttctgtagtccttcgcaac 19151563 Query: 1054 gaacacgtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaag 1113 ||||| |||||||||||||||||||| || ||| ||| ||| | |||||||| |||||| Sbjct: 19151562 gaacatgtgggtaaagggatgtcagataatccaatgaattccatctttatacctaccaag 19151503 Query: 1114 gatcccccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatc 1173 ||| |||| |||||||| || ||| |||||||||||||||| || | || | ||| || Sbjct: 19151502 gatgcccctaagcaatcactgattcagactgttggaataaccgacggcggggcgttcata 19151443 Query: 1174 gaagccagcagcggttttggccagacaggggagagcatccactgccaccatggaatcatg 1233 ||||||||||| ||||| ||||| || || || ||||| |||||||||||||||||| Sbjct: 19151442 gaagccagcagtggtttcagccagtcaccagatagtatccagtgccaccatggaatcatg 19151383 Query: 1234 tctgctgag 1242 || |||||| Sbjct: 19151382 tccgctgag 19151374 Score = 97.6 bits (49), Expect = 2e-16 Identities = 67/73 (91%) Strand = Plus / Minus Query: 113 caatgggtttgatcagcggaggggtgttcttcaagatcttggcgttcctctgcttcatca 172 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 19154432 caatgggtttgatcaatagaggggtcttcttcaagatcttggccttcctctgcttcatca 19154373 Query: 173 gattatctcaagg 185 ||| ||||||||| Sbjct: 19154372 gatcatctcaagg 19154360 Score = 54.0 bits (27), Expect = 0.002 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Minus Query: 1904 atgtaagaatgtgacttagg---agagaagtaaatagtaatttttgaag 1949 |||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 19150150 atgtaagaatgtgacttaggaaaagaaaagtatatagtaatttttgaag 19150102 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 1807 atgggcagatacatgggagtaaagatcttaagggaaaggttaggacgagcggctggagta 1866 |||| ||||||||||||||| ||||| |||| ||| ||||||||||| ||||||||| Sbjct: 19150236 atggtcagatacatgggagtgaagattctaagaagaagattaggacgagctgctggagta 19150177 Query: 1867 taa 1869 ||| Sbjct: 19150176 taa 19150174
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 448 bits (226), Expect = e-122 Identities = 487/574 (84%) Strand = Plus / Minus Query: 1241 agattgggcagttgtcgacgattcctccaaaggagagaagtttagaagcagtccgtaagt 1300 ||||||||||| |||| |||||||| |||||| | |||| | |||| |||||| |||| Sbjct: 73263 agattgggcagctgtcaacgattcccccaaagcaaagaaatctagatgcagtcaagaagt 73204 Query: 1301 atgtacgtaacaaaaatagcctacccaaagaagtattccatggagggtttattctttcga 1360 |||||| ||| ||| ||| ||||||||||||||||||| ||| || ||||| ||||||| Sbjct: 73203 atgtacataaaaaatataacctacccaaagaagtattcagtgggggttttatactttcga 73144 Query: 1361 agattgatggcccgttgtctactggtaatctagttcttgtggatactgatcccaacagca 1420 |||||||||| || ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 73143 agattgatggtccattgtctactggtaatctagttcttgtggatactgacatcaatagca 73084 Query: 1421 atcctaaggtcaccttcaactacttcaaccatccacaggatctgagacgatgtgtttacg 1480 | || | ||| ||||||||||||||| | || ||| ||||||| || || ||||| || | Sbjct: 73083 accccacggttaccttcaactacttccagcacccaaaggatctcagtcggtgtgtctatg 73024 Query: 1481 ggatcaagaccatagagagaatagttagtacaaacactttctcaaactttactcccaaag 1540 ||||||||||||||||||||||| | | |||||| |||| | || ||||| | ||| | Sbjct: 73023 ggatcaagaccatagagagaatactgaagacaaaccatttcactaattttaccctcaatg 72964 Query: 1541 atggtggatattcaatggaaaaactgctcaacatgagtgtagcagctaacataaacctga 1600 |||||||||| |||||||| ||||||||||||||||| |||| ||||||||| ||| Sbjct: 72963 gtggtggatatccaatggaagtggtgctcaacatgagtgtaacagcaaacataaacttga 72904 Query: 1601 taccgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtca 1660 |||| |||||||||||||||||||||||| |||||||||||||||| || |||||||||| Sbjct: 72903 tacccaagcacacaaatgacagcacatccatggagcagttttgcagagacacagtggtca 72844 Query: 1661 ccatctggcattaccatggtgggtgccatgtaggcaaggtggttgaccaacagtacaaag 1720 ||||||||||||||||||| || |||||||| |||||||||||||||||||| ||| | Sbjct: 72843 ccatctggcattaccatggcggatgccatgtgggcaaggtggttgaccaacaataccgtg 72784 Query: 1721 ttattggcgcctcaggcctccgggtaattgacggatcaaccctatccaggtcgccaggaa 1780 | ||||| | ||||||||| || || || || || || ||| ||| ||||| ||||||| Sbjct: 72783 tgattggtgtctcaggccttcgtgtgatcgatgggtcgaccttatttaggtcaccaggaa 72724 Query: 1781 caaacccacaagccacagtcatgatgatgggcag 1814 | ||||| |||||||||||||||||||||||||| Sbjct: 72723 ccaacccgcaagccacagtcatgatgatgggcag 72690 Score = 333 bits (168), Expect = 1e-87 Identities = 285/324 (87%) Strand = Plus / Minus Query: 207 ggatctccctcccctccggaaggcaagcagtttctccaaaatccagcatgaggcgtatga 266 ||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 76148 ggatctccctcccctactgaaggcaagcagtttctccagaatacagcatgaggcatatga 76089 Query: 267 ctacatcattgtcggcggaggcacggccggatgcccattggccgcaacgctgtcgaagaa 326 |||||||||||| || || ||||| || |||||||||||||| |||||| |||| |||| Sbjct: 76088 ctacatcattgttggaggtggcacagctggatgcccattggcagcaacgttgtcccagaa 76029 Query: 327 gtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctcata 386 |||||||||||||||||| || ||||| || ||||| || |||||||| ||||||||| | Sbjct: 76028 gtacaaggtgctcttgctggaaagaggagggtctccttacggcaaccggaacatctcaca 75969 Query: 387 ccttgagaacttccacatttgcttgaccgatcaatcgaagaattccccatctcagggatt 446 |||||||||||||||||||||||| | ||| | ||| ||||| |||||||||||||| Sbjct: 75968 tcttgagaacttccacatttgcttggcagatgactcgccaaattcaccatctcagggatt 75909 Query: 447 catctccactgatggtgtcatcaatgcccgagcaaaggttctaggtggaggaacatgtat 506 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || | Sbjct: 75908 tatctccactgatggtgtcatcaatgcccgggcaaaggttctaggtggtggaactagtgt 75849 Query: 507 caatgccggcttctacagccgagc 530 |||||| || |||||||||||||| Sbjct: 75848 caatgctggtttctacagccgagc 75825 Score = 258 bits (130), Expect = 7e-65 Identities = 250/290 (86%) Strand = Plus / Minus Query: 553 gcaggatgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtt 612 ||||| ||||||| ||||||||| || || || ||||| ||| ||||||||||||||||| Sbjct: 74515 gcaggctgggatgcagagttggtaaaccaatcatacccttggatcgaagagaggattgtt 74456 Query: 613 tattggccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggg 672 |||||||| || ||| | || |||||||| || || || || || ||||||||||||||| Sbjct: 74455 tattggcccaatattacaccgtggcaagctgcactgcgggacgggctgcttgaagcaggg 74396 Query: 673 gtatcgccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaacc 732 || || |||||||||||||| | |||||| |||||||||||||| || || |||||||| Sbjct: 74395 gtctcaccttacaatggatacagctatgatcatctctttggaacaaaggtcgggggaaca 74336 Query: 733 atctttgatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcct 792 ||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||| | Sbjct: 74335 atctttgatgaggctgggtacaggcacactgctgctgacctccttgctgctggaaatcat 74276 Query: 793 aacaacctcaaagtgctgcttcatgctagtgtgaacaaaataatgttcaa 842 |||||||||| || || |||||||||||||||| || |||||| ||||| Sbjct: 74275 aacaacctcagggttctccttcatgctagtgtgaccagaataattttcaa 74226 Score = 161 bits (81), Expect = 1e-35 Identities = 297/369 (80%) Strand = Plus / Minus Query: 874 attggggttcaatttacggatgagaatggcgggcaccatcaagcctttctcagccagaag 933 ||||| ||| |||| | |||||||||||| ||||| || || ||||| || | || || Sbjct: 74107 attggtgttgaattcaaggatgagaatggggggcagcagcatgccttccttacccgaaac 74048 Query: 934 agaggcagtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatc 993 |||| ||| ||||| || ||||||| || |||||||| || |||||||| || ||| | Sbjct: 74047 agagacagcgagattatcatctctgctggtgcaattggcagtccccagctattgttgctt 73988 Query: 994 agcggcattggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaac 1053 || || |||||||| | | |||||||| |||||||||||| || |||| |||| |||| Sbjct: 73987 agtggaattggacccagaaaggaacttaaaaagcataacatttctgtagtccttcgcaac 73928 Query: 1054 gaacacgtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaag 1113 ||||| |||||||||||||||||||| || ||| ||| ||| | |||||||| |||||| Sbjct: 73927 gaacatgtgggtaaagggatgtcagataatccaatgaattccatctttatacctaccaag 73868 Query: 1114 gatcccccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatc 1173 ||| |||| |||||||| || ||| |||||||||||||||| || | || | ||| || Sbjct: 73867 gatgcccctaagcaatcactgattcagactgttggaataaccgacggcggggcgttcata 73808 Query: 1174 gaagccagcagcggttttggccagacaggggagagcatccactgccaccatggaatcatg 1233 ||||||||||| ||||| ||||| || || || ||||| |||||||||||||||||| Sbjct: 73807 gaagccagcagtggtttcagccagtcaccagatagtatccagtgccaccatggaatcatg 73748 Query: 1234 tctgctgag 1242 || |||||| Sbjct: 73747 tccgctgag 73739 Score = 97.6 bits (49), Expect = 2e-16 Identities = 67/73 (91%) Strand = Plus / Minus Query: 113 caatgggtttgatcagcggaggggtgttcttcaagatcttggcgttcctctgcttcatca 172 ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 76797 caatgggtttgatcaatagaggggtcttcttcaagatcttggccttcctctgcttcatca 76738 Query: 173 gattatctcaagg 185 ||| ||||||||| Sbjct: 76737 gatcatctcaagg 76725 Score = 54.0 bits (27), Expect = 0.002 Identities = 44/49 (89%), Gaps = 3/49 (6%) Strand = Plus / Minus Query: 1904 atgtaagaatgtgacttagg---agagaagtaaatagtaatttttgaag 1949 |||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct: 72515 atgtaagaatgtgacttaggaaaagaaaagtatatagtaatttttgaag 72467 Score = 54.0 bits (27), Expect = 0.002 Identities = 54/63 (85%) Strand = Plus / Minus Query: 1807 atgggcagatacatgggagtaaagatcttaagggaaaggttaggacgagcggctggagta 1866 |||| ||||||||||||||| ||||| |||| ||| ||||||||||| ||||||||| Sbjct: 72601 atggtcagatacatgggagtgaagattctaagaagaagattaggacgagctgctggagta 72542 Query: 1867 taa 1869 ||| Sbjct: 72541 taa 72539
>ref|NM_001069531.1| Oryza sativa (japonica cultivar-group) Os09g0363900 (Os09g0363900) mRNA, complete cds Length = 2026 Score = 184 bits (93), Expect = 8e-43 Identities = 279/341 (81%) Strand = Plus / Plus Query: 940 agtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatcagcggc 999 ||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||| || Sbjct: 932 agtgaaatcattgtctctgctggcgcaattggcagcccccagctgctattgctcagtggg 991 Query: 1000 attggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaacgaacac 1059 |||||||| |||| ||| |||| || ||||| |||||| ||||||| || ||| | | Sbjct: 992 attggacccaagaatgaccttaggagccataaaattcctgtagttctccataacaagtat 1051 Query: 1060 gtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaaggatccc 1119 ||||||||||||||| | || ||||| ||| |||| |||| ||||| || || ||| Sbjct: 1052 gtgggtaaagggatggctgataaccccatgaactccatattcataccgacgaaaagcccc 1111 Query: 1120 ccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatcgaagcc 1179 || || || || ||||||||||||||||||||||| | ||||||||| || || ||| Sbjct: 1112 cctcgccagtccctgattgagactgttggaataactgaagctggtgtgttcattgaggcc 1171 Query: 1180 agcagcggttttggccagacaggggagagcatccactgccaccatggaatcatgtctgct 1239 || || |||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 1172 agtagtggttttggccagtcaccagaaagcatccattgccaccatggaatcatgtccgct 1231 Query: 1240 gagattgggcagttgtcgacgattcctccaaaggagagaag 1280 |||||||| ||| |||| || |||||||| ||||| ||||| Sbjct: 1232 gagattggacagctgtccacaattcctccgaaggaaagaag 1272 Score = 139 bits (70), Expect = 4e-29 Identities = 313/394 (79%) Strand = Plus / Plus Query: 436 tctcagggattcatctccactgatggtgtcatcaatgcccgagcaaaggttctaggtgga 495 ||||||| |||||||||||||| || ||||||||||||||||| | ||| | || || Sbjct: 428 tctcaggccttcatctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggt 487 Query: 496 ggaacatgtatcaatgccggcttctacagccgagccaaccgaagatttgtgcaggatgca 555 || || || ||||||||||||||||||||||| |||| | || || | ||||| | | Sbjct: 488 ggcacctgcatcaatgccggcttctacagccgggccagctcaaacttcatccaggaggta 547 Query: 556 ggatgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtttat 615 || ||||||||||| |||||||| |||||| ||| ||||| || || | ||| || | Sbjct: 548 ggctgggatgaagacctggtgaatgagtccttcccttgggtggaggacaagatcgtccag 607 Query: 616 tggccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggggta 675 ||||| ||||| || |||||||| || || || | ||||| || || ||||||| ||| Sbjct: 608 tggcctaagatcgcaccttggcaggctgcactaagggatgggctactccaagcaggtgta 667 Query: 676 tcgccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaaccatc 735 || |||| |||||| || || ||||||||| | | ||| ||||||||||| || |||||| Sbjct: 668 tctcctttcaatggctacacatatgaccatgtttctgggaccaaagttggtggcaccatc 727 Query: 736 tttgatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcctaac 795 ||||||||| |||| ||||| ||||| || || ||| | | || |||| | | |||||| Sbjct: 728 tttgatgagactggctaccgccacacagcagccgacttacttgcagctggagaccctaac 787 Query: 796 aacctcaaagtgctgcttcatgctagtgtgaaca 829 ||||| | ||||||||||||||||||||||||| Sbjct: 788 aacctaagggtgctgcttcatgctagtgtgaaca 821 Score = 109 bits (55), Expect = 4e-20 Identities = 138/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 1545 tggatattcaatggaaaaactgctcaacatgagtgtagcag-ctaacataaacctgatac 1603 |||| |||||||||||| | ||||||| |||||||| |||| |||| | ||| |||||| Sbjct: 1537 tggacattcaatggaaagagtgctcaatatgagtgt-gcaggctaatgtgaacttgatac 1595 Query: 1604 cgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtcacca 1663 | ||||| |||||||||| |||| | ||||| ||||||||||||||||| | |||| Sbjct: 1596 ccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataacca 1655 Query: 1664 tctggcattaccatggtgggtgccatgtaggcaaggtggttga 1706 ||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 1656 tctggcactaccatggtggatgccatgtagggaaggtggttga 1698 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 325 aagtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctca 384 ||||||||||||||| |||| ||||| || || ||||| ||||||||||||||| |||| Sbjct: 317 aagtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctcc 376 Query: 385 taccttgagaacttccacatt 405 ||| | ||||||||||||||| Sbjct: 377 tacatggagaacttccacatt 397 Score = 65.9 bits (33), Expect = 5e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagatc 1833 ||||| || ||||| |||||||| |||||||||||||||||||| | ||||| | |||| Sbjct: 1766 ccagggacgaaccctcaagccacggtcatgatgatgggcagatattttggagtgatgatc 1825 Query: 1834 ttaagggaaaggttaggacgagcggctggagtataat 1870 |||||| ||| |||| ||||| |||||||| |||| Sbjct: 1826 ctaaggggaagactaggtcgagcagctggagtgtaat 1862 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1432 accttcaactacttcaaccatccacaggatct 1463 |||||||||||||||| |||||||||||||| Sbjct: 1424 accttcaactacttcagtcatccacaggatct 1455
>dbj|AK072899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148B06, full insert sequence Length = 2027 Score = 184 bits (93), Expect = 8e-43 Identities = 279/341 (81%) Strand = Plus / Plus Query: 940 agtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatcagcggc 999 ||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||| || Sbjct: 933 agtgaaatcattgtctctgctggcgcaattggcagcccccagctgctattgctcagtggg 992 Query: 1000 attggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaacgaacac 1059 |||||||| |||| ||| |||| || ||||| |||||| ||||||| || ||| | | Sbjct: 993 attggacccaagaatgaccttaggagccataaaattcctgtagttctccataacaagtat 1052 Query: 1060 gtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaaggatccc 1119 ||||||||||||||| | || ||||| ||| |||| |||| ||||| || || ||| Sbjct: 1053 gtgggtaaagggatggctgataaccccatgaactccatattcataccgacgaaaagcccc 1112 Query: 1120 ccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatcgaagcc 1179 || || || || ||||||||||||||||||||||| | ||||||||| || || ||| Sbjct: 1113 cctcgccagtccctgattgagactgttggaataactgaagctggtgtgttcattgaggcc 1172 Query: 1180 agcagcggttttggccagacaggggagagcatccactgccaccatggaatcatgtctgct 1239 || || |||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 1173 agtagtggttttggccagtcaccagaaagcatccattgccaccatggaatcatgtccgct 1232 Query: 1240 gagattgggcagttgtcgacgattcctccaaaggagagaag 1280 |||||||| ||| |||| || |||||||| ||||| ||||| Sbjct: 1233 gagattggacagctgtccacaattcctccgaaggaaagaag 1273 Score = 139 bits (70), Expect = 4e-29 Identities = 313/394 (79%) Strand = Plus / Plus Query: 436 tctcagggattcatctccactgatggtgtcatcaatgcccgagcaaaggttctaggtgga 495 ||||||| |||||||||||||| || ||||||||||||||||| | ||| | || || Sbjct: 429 tctcaggccttcatctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggt 488 Query: 496 ggaacatgtatcaatgccggcttctacagccgagccaaccgaagatttgtgcaggatgca 555 || || || ||||||||||||||||||||||| |||| | || || | ||||| | | Sbjct: 489 ggcacctgcatcaatgccggcttctacagccgggccagctcaaacttcatccaggaggta 548 Query: 556 ggatgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtttat 615 || ||||||||||| |||||||| |||||| ||| ||||| || || | ||| || | Sbjct: 549 ggctgggatgaagacctggtgaatgagtccttcccttgggtggaggacaagatcgtccag 608 Query: 616 tggccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggggta 675 ||||| ||||| || |||||||| || || || | ||||| || || ||||||| ||| Sbjct: 609 tggcctaagatcgcaccttggcaggctgcactaagggatgggctactccaagcaggtgta 668 Query: 676 tcgccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaaccatc 735 || |||| |||||| || || ||||||||| | | ||| ||||||||||| || |||||| Sbjct: 669 tctcctttcaatggctacacatatgaccatgtttctgggaccaaagttggtggcaccatc 728 Query: 736 tttgatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcctaac 795 ||||||||| |||| ||||| ||||| || || ||| | | || |||| | | |||||| Sbjct: 729 tttgatgagactggctaccgccacacagcagccgacttacttgcagctggagaccctaac 788 Query: 796 aacctcaaagtgctgcttcatgctagtgtgaaca 829 ||||| | ||||||||||||||||||||||||| Sbjct: 789 aacctaagggtgctgcttcatgctagtgtgaaca 822 Score = 109 bits (55), Expect = 4e-20 Identities = 138/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 1545 tggatattcaatggaaaaactgctcaacatgagtgtagcag-ctaacataaacctgatac 1603 |||| |||||||||||| | ||||||| |||||||| |||| |||| | ||| |||||| Sbjct: 1538 tggacattcaatggaaagagtgctcaatatgagtgt-gcaggctaatgtgaacttgatac 1596 Query: 1604 cgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtcacca 1663 | ||||| |||||||||| |||| | ||||| ||||||||||||||||| | |||| Sbjct: 1597 ccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataacca 1656 Query: 1664 tctggcattaccatggtgggtgccatgtaggcaaggtggttga 1706 ||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 1657 tctggcactaccatggtggatgccatgtagggaaggtggttga 1699 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 325 aagtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctca 384 ||||||||||||||| |||| ||||| || || ||||| ||||||||||||||| |||| Sbjct: 318 aagtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctcc 377 Query: 385 taccttgagaacttccacatt 405 ||| | ||||||||||||||| Sbjct: 378 tacatggagaacttccacatt 398 Score = 65.9 bits (33), Expect = 5e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagatc 1833 ||||| || ||||| |||||||| |||||||||||||||||||| | ||||| | |||| Sbjct: 1767 ccagggacgaaccctcaagccacggtcatgatgatgggcagatattttggagtgatgatc 1826 Query: 1834 ttaagggaaaggttaggacgagcggctggagtataat 1870 |||||| ||| |||| ||||| |||||||| |||| Sbjct: 1827 ctaaggggaagactaggtcgagcagctggagtgtaat 1863 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1432 accttcaactacttcaaccatccacaggatct 1463 |||||||||||||||| |||||||||||||| Sbjct: 1425 accttcaactacttcagtcatccacaggatct 1456
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 157 bits (79), Expect = 2e-34 Identities = 247/303 (81%) Strand = Plus / Minus Query: 940 agtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatcagcggc 999 ||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||| || Sbjct: 11868787 agtgaaatcattgtctctgctggcgcaattggcagcccccagctgctattgctcagtggg 11868728 Query: 1000 attggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaacgaacac 1059 |||||||| |||| ||| |||| || ||||| |||||| ||||||| || ||| | | Sbjct: 11868727 attggacccaagaatgaccttaggagccataaaattcctgtagttctccataacaagtat 11868668 Query: 1060 gtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaaggatccc 1119 ||||||||||||||| | || ||||| ||| |||| |||| ||||| || || ||| Sbjct: 11868667 gtgggtaaagggatggctgataaccccatgaactccatattcataccgacgaaaagcccc 11868608 Query: 1120 ccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatcgaagcc 1179 || || || || ||||||||||||||||||||||| | ||||||||| || || ||| Sbjct: 11868607 cctcgccagtccctgattgagactgttggaataactgaagctggtgtgttcattgaggcc 11868548 Query: 1180 agcagcggttttggccagacaggggagagcatccactgccaccatggaatcatgtctgct 1239 || || |||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 11868547 agtagtggttttggccagtcaccagaaagcatccattgccaccatggaatcatgtccgct 11868488 Query: 1240 gag 1242 ||| Sbjct: 11868487 gag 11868485 Score = 109 bits (55), Expect = 4e-20 Identities = 138/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 1545 tggatattcaatggaaaaactgctcaacatgagtgtagcag-ctaacataaacctgatac 1603 |||| |||||||||||| | ||||||| |||||||| |||| |||| | ||| |||||| Sbjct: 11867730 tggacattcaatggaaagagtgctcaatatgagtgt-gcaggctaatgtgaacttgatac 11867672 Query: 1604 cgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtcacca 1663 | ||||| |||||||||| |||| | ||||| ||||||||||||||||| | |||| Sbjct: 11867671 ccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataacca 11867612 Query: 1664 tctggcattaccatggtgggtgccatgtaggcaaggtggttga 1706 ||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 11867611 tctggcactaccatggtggatgccatgtagggaaggtggttga 11867569 Score = 101 bits (51), Expect = 1e-17 Identities = 216/271 (79%) Strand = Plus / Minus Query: 559 tgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtttattgg 618 ||||||||||| |||||||| |||||| ||| ||||| || || | ||| || | ||| Sbjct: 11869312 tgggatgaagacctggtgaatgagtccttcccttgggtggaggacaagatcgtccagtgg 11869253 Query: 619 ccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggggtatcg 678 || ||||| || |||||||| || || || | ||||| || || ||||||| ||||| Sbjct: 11869252 cctaagatcgcaccttggcaggctgcactaagggatgggctactccaagcaggtgtatct 11869193 Query: 679 ccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaaccatcttt 738 |||| |||||| || || ||||||||| | | ||| ||||||||||| || ||||||||| Sbjct: 11869192 cctttcaatggctacacatatgaccatgtttctgggaccaaagttggtggcaccatcttt 11869133 Query: 739 gatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcctaacaac 798 |||||| |||| ||||| ||||| || || ||| | | || |||| | | ||||||||| Sbjct: 11869132 gatgagactggctaccgccacacagcagccgacttacttgcagctggagaccctaacaac 11869073 Query: 799 ctcaaagtgctgcttcatgctagtgtgaaca 829 || | ||||||||||||||||||||||||| Sbjct: 11869072 ctaagggtgctgcttcatgctagtgtgaaca 11869042 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 325 aagtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctca 384 ||||||||||||||| |||| ||||| || || ||||| ||||||||||||||| |||| Sbjct: 11871242 aagtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctcc 11871183 Query: 385 taccttgagaacttccacatt 405 ||| | ||||||||||||||| Sbjct: 11871182 tacatggagaacttccacatt 11871162 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 436 tctcagggattcatctccactgatggtgtcatcaatgcccgagcaaaggttctaggtgga 495 ||||||| |||||||||||||| || ||||||||||||||||| | ||| | || || Sbjct: 11871131 tctcaggccttcatctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggt 11871072 Query: 496 ggaacatgtatcaatgccggcttctacagccgagcca 532 || || || ||||||||||||||||||||||| |||| Sbjct: 11871071 ggcacctgcatcaatgccggcttctacagccgggcca 11871035 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacat 1820 ||||| || ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 11867501 ccagggacgaaccctcaagccacggtcatgatgatgggcaggtacat 11867455 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1432 accttcaactacttcaaccatccacaggatct 1463 |||||||||||||||| |||||||||||||| Sbjct: 11867843 accttcaactacttcagtcatccacaggatct 11867812
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 157 bits (79), Expect = 2e-34 Identities = 247/303 (81%) Strand = Plus / Minus Query: 940 agtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatcagcggc 999 ||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||| || Sbjct: 50277 agtgaaatcattgtctctgctggcgcaattggcagcccccagctgctattgctcagtggg 50218 Query: 1000 attggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaacgaacac 1059 |||||||| |||| ||| |||| || ||||| |||||| ||||||| || ||| | | Sbjct: 50217 attggacccaagaatgaccttaggagccataaaattcctgtagttctccataacaagtat 50158 Query: 1060 gtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaaggatccc 1119 ||||||||||||||| | || ||||| ||| |||| |||| ||||| || || ||| Sbjct: 50157 gtgggtaaagggatggctgataaccccatgaactccatattcataccgacgaaaagcccc 50098 Query: 1120 ccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatcgaagcc 1179 || || || || ||||||||||||||||||||||| | ||||||||| || || ||| Sbjct: 50097 cctcgccagtccctgattgagactgttggaataactgaagctggtgtgttcattgaggcc 50038 Query: 1180 agcagcggttttggccagacaggggagagcatccactgccaccatggaatcatgtctgct 1239 || || |||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 50037 agtagtggttttggccagtcaccagaaagcatccattgccaccatggaatcatgtccgct 49978 Query: 1240 gag 1242 ||| Sbjct: 49977 gag 49975 Score = 109 bits (55), Expect = 4e-20 Identities = 138/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 1545 tggatattcaatggaaaaactgctcaacatgagtgtagcag-ctaacataaacctgatac 1603 |||| |||||||||||| | ||||||| |||||||| |||| |||| | ||| |||||| Sbjct: 49220 tggacattcaatggaaagagtgctcaatatgagtgt-gcaggctaatgtgaacttgatac 49162 Query: 1604 cgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtcacca 1663 | ||||| |||||||||| |||| | ||||| ||||||||||||||||| | |||| Sbjct: 49161 ccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataacca 49102 Query: 1664 tctggcattaccatggtgggtgccatgtaggcaaggtggttga 1706 ||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 49101 tctggcactaccatggtggatgccatgtagggaaggtggttga 49059 Score = 101 bits (51), Expect = 1e-17 Identities = 216/271 (79%) Strand = Plus / Minus Query: 559 tgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtttattgg 618 ||||||||||| |||||||| |||||| ||| ||||| || || | ||| || | ||| Sbjct: 50802 tgggatgaagacctggtgaatgagtccttcccttgggtggaggacaagatcgtccagtgg 50743 Query: 619 ccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggggtatcg 678 || ||||| || |||||||| || || || | ||||| || || ||||||| ||||| Sbjct: 50742 cctaagatcgcaccttggcaggctgcactaagggatgggctactccaagcaggtgtatct 50683 Query: 679 ccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaaccatcttt 738 |||| |||||| || || ||||||||| | | ||| ||||||||||| || ||||||||| Sbjct: 50682 cctttcaatggctacacatatgaccatgtttctgggaccaaagttggtggcaccatcttt 50623 Query: 739 gatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcctaacaac 798 |||||| |||| ||||| ||||| || || ||| | | || |||| | | ||||||||| Sbjct: 50622 gatgagactggctaccgccacacagcagccgacttacttgcagctggagaccctaacaac 50563 Query: 799 ctcaaagtgctgcttcatgctagtgtgaaca 829 || | ||||||||||||||||||||||||| Sbjct: 50562 ctaagggtgctgcttcatgctagtgtgaaca 50532 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 325 aagtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctca 384 ||||||||||||||| |||| ||||| || || ||||| ||||||||||||||| |||| Sbjct: 52732 aagtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctcc 52673 Query: 385 taccttgagaacttccacatt 405 ||| | ||||||||||||||| Sbjct: 52672 tacatggagaacttccacatt 52652 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 436 tctcagggattcatctccactgatggtgtcatcaatgcccgagcaaaggttctaggtgga 495 ||||||| |||||||||||||| || ||||||||||||||||| | ||| | || || Sbjct: 52621 tctcaggccttcatctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggt 52562 Query: 496 ggaacatgtatcaatgccggcttctacagccgagcca 532 || || || ||||||||||||||||||||||| |||| Sbjct: 52561 ggcacctgcatcaatgccggcttctacagccgggcca 52525 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacat 1820 ||||| || ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 48991 ccagggacgaaccctcaagccacggtcatgatgatgggcaggtacat 48945 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1432 accttcaactacttcaaccatccacaggatct 1463 |||||||||||||||| |||||||||||||| Sbjct: 49333 accttcaactacttcagtcatccacaggatct 49302
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 157 bits (79), Expect = 2e-34 Identities = 247/303 (81%) Strand = Plus / Minus Query: 940 agtgagatcattgtctctgccggcgcaattggaagcccccagctgttattgatcagcggc 999 ||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||| || Sbjct: 111605 agtgaaatcattgtctctgctggcgcaattggcagcccccagctgctattgctcagtggg 111546 Query: 1000 attggaccaaagagtgaacttaagaagcataacattcctatagttcttcacaacgaacac 1059 |||||||| |||| ||| |||| || ||||| |||||| ||||||| || ||| | | Sbjct: 111545 attggacccaagaatgaccttaggagccataaaattcctgtagttctccataacaagtat 111486 Query: 1060 gtgggtaaagggatgtcagacaacccactgagctccgtatttatacccaccaaggatccc 1119 ||||||||||||||| | || ||||| ||| |||| |||| ||||| || || ||| Sbjct: 111485 gtgggtaaagggatggctgataaccccatgaactccatattcataccgacgaaaagcccc 111426 Query: 1120 ccaaagcaatctcttattgagactgttggaataactgatgatggtgtgtttatcgaagcc 1179 || || || || ||||||||||||||||||||||| | ||||||||| || || ||| Sbjct: 111425 cctcgccagtccctgattgagactgttggaataactgaagctggtgtgttcattgaggcc 111366 Query: 1180 agcagcggttttggccagacaggggagagcatccactgccaccatggaatcatgtctgct 1239 || || |||||||||||| || || |||||||| |||||||||||||||||||| ||| Sbjct: 111365 agtagtggttttggccagtcaccagaaagcatccattgccaccatggaatcatgtccgct 111306 Query: 1240 gag 1242 ||| Sbjct: 111305 gag 111303 Score = 109 bits (55), Expect = 4e-20 Identities = 138/163 (84%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 1545 tggatattcaatggaaaaactgctcaacatgagtgtagcag-ctaacataaacctgatac 1603 |||| |||||||||||| | ||||||| |||||||| |||| |||| | ||| |||||| Sbjct: 110548 tggacattcaatggaaagagtgctcaatatgagtgt-gcaggctaatgtgaacttgatac 110490 Query: 1604 cgaagcacacaaatgacagcacatccttggagcagttttgcagggatacagtggtcacca 1663 | ||||| |||||||||| |||| | ||||| ||||||||||||||||| | |||| Sbjct: 110489 ccaagcatacaaatgacacagaatccctagagcaattttgcagggatacagtaataacca 110430 Query: 1664 tctggcattaccatggtgggtgccatgtaggcaaggtggttga 1706 ||||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 110429 tctggcactaccatggtggatgccatgtagggaaggtggttga 110387 Score = 101 bits (51), Expect = 1e-17 Identities = 216/271 (79%) Strand = Plus / Minus Query: 559 tgggatgaagagttggtgaatcagtcctacccctgggtcgaagagaggattgtttattgg 618 ||||||||||| |||||||| |||||| ||| ||||| || || | ||| || | ||| Sbjct: 112130 tgggatgaagacctggtgaatgagtccttcccttgggtggaggacaagatcgtccagtgg 112071 Query: 619 ccaaagattgcgccttggcaagccgcccttcgtgatggtctgcttgaagcaggggtatcg 678 || ||||| || |||||||| || || || | ||||| || || ||||||| ||||| Sbjct: 112070 cctaagatcgcaccttggcaggctgcactaagggatgggctactccaagcaggtgtatct 112011 Query: 679 ccttacaatggatatacctatgaccatctctttggaaccaaagttgggggaaccatcttt 738 |||| |||||| || || ||||||||| | | ||| ||||||||||| || ||||||||| Sbjct: 112010 cctttcaatggctacacatatgaccatgtttctgggaccaaagttggtggcaccatcttt 111951 Query: 739 gatgaggctgggtaccggcacactgctgctgacctcttagctgctgcaaatcctaacaac 798 |||||| |||| ||||| ||||| || || ||| | | || |||| | | ||||||||| Sbjct: 111950 gatgagactggctaccgccacacagcagccgacttacttgcagctggagaccctaacaac 111891 Query: 799 ctcaaagtgctgcttcatgctagtgtgaaca 829 || | ||||||||||||||||||||||||| Sbjct: 111890 ctaagggtgctgcttcatgctagtgtgaaca 111860 Score = 81.8 bits (41), Expect = 9e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 325 aagtacaaggtgctcttgcttgagagaggtggatctccatatggcaaccgcaacatctca 384 ||||||||||||||| |||| ||||| || || ||||| ||||||||||||||| |||| Sbjct: 114060 aagtacaaggtgctcctgctggagaggggagggtctccgtatggcaaccgcaacgtctcc 114001 Query: 385 taccttgagaacttccacatt 405 ||| | ||||||||||||||| Sbjct: 114000 tacatggagaacttccacatt 113980 Score = 73.8 bits (37), Expect = 2e-09 Identities = 82/97 (84%) Strand = Plus / Minus Query: 436 tctcagggattcatctccactgatggtgtcatcaatgcccgagcaaaggttctaggtgga 495 ||||||| |||||||||||||| || ||||||||||||||||| | ||| | || || Sbjct: 113949 tctcaggccttcatctccactgacggcgtcatcaatgcccgagcgagggtgttgggaggt 113890 Query: 496 ggaacatgtatcaatgccggcttctacagccgagcca 532 || || || ||||||||||||||||||||||| |||| Sbjct: 113889 ggcacctgcatcaatgccggcttctacagccgggcca 113853 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacat 1820 ||||| || ||||| |||||||| ||||||||||||||||| ||||| Sbjct: 110319 ccagggacgaaccctcaagccacggtcatgatgatgggcaggtacat 110273 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1432 accttcaactacttcaaccatccacaggatct 1463 |||||||||||||||| |||||||||||||| Sbjct: 110661 accttcaactacttcagtcatccacaggatct 110630
>ref|NM_105955.2| Arabidopsis thaliana HTH (HOTHEAD); aldehyde-lyase (HTH) mRNA, complete cds Length = 2107 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 1785 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 1843
>dbj|AK221002.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-65-L07 Length = 495 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 172 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 230
>dbj|AK221876.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-16-D04 Length = 1125 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 839 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 897
>gb|AY054193.1| Arabidopsis thaliana At1g72970/F3N23_17 mRNA, complete cds Length = 2103 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 1786 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 1844
>dbj|AB027458.2| Arabidopsis thaliana ACE mRNA, complete cds Length = 2096 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 1778 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 1836
>gb|BT002648.1| Arabidopsis thaliana At1g72970/F3N23_17 gene, complete cds Length = 1785 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 1690 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 1748
>emb|BX816291.1|CNS0ACDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH3ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1466 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 1774 ccaggaacaaacccacaagccacagtcatgatgatgggcagatacatgggagtaaagat 1832 |||||||| ||||| ||||| || | ||||||||||| |||||||||||||| ||||| Sbjct: 1204 ccaggaaccaacccgcaagctactatgatgatgatgggaagatacatgggagtcaagat 1262
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 266 actacatcattgtcggcggaggcacggccggatgcccattggccgcaacgctgtcg 321 |||||||| | |||||||| ||||||||||| ||||| |||| || ||||||||| Sbjct: 143524 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggcgacgctgtcg 143579 Score = 44.1 bits (22), Expect = 2.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1634 agcagttttgcagggatacagtggtcaccatctggcattaccatggtgggtgccatgt 1691 |||||| ||||||||| || ||| | ||||||||||| ||||| || || |||||||| Sbjct: 145056 agcagtattgcagggagacggtgatgaccatctggcactaccacggcggctgccatgt 145113
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 266 actacatcattgtcggcggaggcacggccggatgcccattggccgcaacgctgtcg 321 |||||||| | |||||||| ||||||||||| ||||| |||| || ||||||||| Sbjct: 988325 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggcgacgctgtcg 988380 Score = 44.1 bits (22), Expect = 2.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1634 agcagttttgcagggatacagtggtcaccatctggcattaccatggtgggtgccatgt 1691 |||||| ||||||||| || ||| | ||||||||||| ||||| || || |||||||| Sbjct: 989857 agcagtattgcagggagacggtgatgaccatctggcactaccacggcggctgccatgt 989914
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.13 Identities = 33/36 (91%) Strand = Plus / Minus Query: 265 gactacatcattgtcggcggaggcacggccggatgc 300 |||||| |||| |||||||| ||||||||||||||| Sbjct: 1990092 gactacgtcatcgtcggcgggggcacggccggatgc 1990057
>emb|AL611944.10| Mouse DNA sequence from clone RP23-279E14 on chromosome 13 Contains the gene for the ortholog of rat and human ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 UQCRFS1, a novel gene and a CpG island, complete sequence Length = 194065 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Minus Query: 71 tggaaaagacaaggaagaaaaaca 94 |||||||||||||||||||||||| Sbjct: 76627 tggaaaagacaaggaagaaaaaca 76604
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 48.1 bits (24), Expect = 0.13 Identities = 48/56 (85%) Strand = Plus / Plus Query: 266 actacatcattgtcggcggaggcacggccggatgcccattggccgcaacgctgtcg 321 |||||||| | |||||||| ||||||||||| ||||| |||| || ||||||||| Sbjct: 8542 actacatcgtcgtcggcggcggcacggccgggtgcccgctggcggcgacgctgtcg 8597 Score = 44.1 bits (22), Expect = 2.0 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1634 agcagttttgcagggatacagtggtcaccatctggcattaccatggtgggtgccatgt 1691 |||||| ||||||||| || ||| | ||||||||||| ||||| || || |||||||| Sbjct: 10074 agcagtattgcagggagacggtgatgaccatctggcactaccacggcggctgccatgt 10131
>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete sequence Length = 132817 Score = 48.1 bits (24), Expect = 0.13 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1771 tcgccaggaacaaacccacaagccacagtcatgatgatgggcag 1814 ||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 31780 tcgccgggaacaaatcctcaagctactgtcatgatgatgggcag 31737 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 711 tggaaccaaagttgggggaaccatctttga 740 ||||||||||||||| |||||||| ||||| Sbjct: 33398 tggaaccaaagttggtggaaccatttttga 33369 Score = 42.1 bits (21), Expect = 7.8 Identities = 54/65 (83%) Strand = Plus / Minus Query: 1636 cagttttgcagggatacagtggtcaccatctggcattaccatggtgggtgccatgtaggc 1695 |||||||| || || || ||| |||| || ||||| || |||||||| ||||||||||| Sbjct: 31915 cagttttgtagagacactgtgatcactatttggcactatcatggtggatgccatgtaggg 31856 Query: 1696 aaggt 1700 ||||| Sbjct: 31855 aaggt 31851
>dbj|AK242487.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080306H24, full insert sequence Length = 1952 Score = 46.1 bits (23), Expect = 0.50 Identities = 44/51 (86%) Strand = Plus / Plus Query: 1783 aacccacaagccacagtcatgatgatgggcagatacatgggagtaaagatc 1833 ||||| || ||||| ||||||||| | ||||| ||||||||||| |||||| Sbjct: 1705 aacccgcaggccaccgtcatgatgcttggcaggtacatgggagtcaagatc 1755
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.50 Identities = 41/47 (87%) Strand = Plus / Plus Query: 256 gaggcgtatgactacatcattgtcggcggaggcacggccggatgccc 302 |||||||| ||||||||| | ||||| ||||||||||| || ||||| Sbjct: 26521086 gaggcgtacgactacatcgtggtcgggggaggcacggcggggtgccc 26521132 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1789 caagccacagtcatgatgatgggcag 1814 ||||||||| |||||||||||||||| Sbjct: 26523744 caagccacaatcatgatgatgggcag 26523769
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 46.1 bits (23), Expect = 0.50 Identities = 41/47 (87%) Strand = Plus / Plus Query: 256 gaggcgtatgactacatcattgtcggcggaggcacggccggatgccc 302 |||||||| ||||||||| | ||||| ||||||||||| || ||||| Sbjct: 54739 gaggcgtacgactacatcgtggtcgggggaggcacggcggggtgccc 54785 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1789 caagccacagtcatgatgatgggcag 1814 ||||||||| |||||||||||||||| Sbjct: 57397 caagccacaatcatgatgatgggcag 57422
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 46.1 bits (23), Expect = 0.50 Identities = 41/47 (87%) Strand = Plus / Plus Query: 256 gaggcgtatgactacatcattgtcggcggaggcacggccggatgccc 302 |||||||| ||||||||| | ||||| ||||||||||| || ||||| Sbjct: 133125 gaggcgtacgactacatcgtggtcgggggaggcacggcggggtgccc 133171 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1789 caagccacagtcatgatgatgggcag 1814 ||||||||| |||||||||||||||| Sbjct: 135783 caagccacaatcatgatgatgggcag 135808
>ref|XM_955181.1| Neurospora crassa OR74A hypothetical protein (NCU07113.1) partial mRNA Length = 1611 Score = 46.1 bits (23), Expect = 0.50 Identities = 26/27 (96%) Strand = Plus / Plus Query: 264 tgactacatcattgtcggcggaggcac 290 ||||||||||||||||||||| ||||| Sbjct: 63 tgactacatcattgtcggcggcggcac 89
>emb|CR855158.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147H17, complete sequence Length = 79528 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcacggccggatgccc 302 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 58674 gactacatcatcgtgggcggcggcacggccgggtgccc 58711
>ref|NM_001060147.1| Oryza sativa (japonica cultivar-group) Os04g0573100 (Os04g0573100) mRNA, complete cds Length = 2044 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcacggccggatgccc 302 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 220 gactacatcatcgtgggcggcggcacggccgggtgccc 257
>ref|XM_001214030.1| Aspergillus terreus NIH2624 predicted protein (ATEG_04852) mRNA, complete cds Length = 1863 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcac 290 ||||||||||| |||||||||||||| Sbjct: 73 gactacatcatcgtcggcggaggcac 98
>gb|AY744151.1| Pseudomonas syringae putative reductase/acetyltransferase gene, complete cds Length = 2085 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tatgactacatcattgtcggcg 283 |||||||||||||||||||||| Sbjct: 10 tatgactacatcattgtcggcg 31
>gb|DQ187985.1| Pseudomonas syringae tabtoxin biosynthetic gene cluster, complete sequence Length = 22972 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 tatgactacatcattgtcggcg 283 |||||||||||||||||||||| Sbjct: 11058 tatgactacatcattgtcggcg 11079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcacggccggatgccc 302 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 28843801 gactacatcatcgtgggcggcggcacggccgggtgccc 28843838
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 attcatctccactgatggtgtc 465 |||||||||||||||||||||| Sbjct: 14911615 attcatctccactgatggtgtc 14911594
>dbj|AP005654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0080M22 Length = 140743 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 attcatctccactgatggtgtc 465 |||||||||||||||||||||| Sbjct: 25473 attcatctccactgatggtgtc 25452
>dbj|AK106787.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A02, full insert sequence Length = 2044 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcacggccggatgccc 302 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 220 gactacatcatcgtgggcggcggcacggccgggtgccc 257
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 gactacatcattgtcggcggaggcacggccggatgccc 302 ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 55863 gactacatcatcgtgggcggcggcacggccgggtgccc 55900
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 tgggtaccggcacactgctgc 767 ||||||||||||||||||||| Sbjct: 74956 tgggtaccggcacactgctgc 74936
>ref|XM_001224466.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05253) mRNA, complete cds Length = 1659 Score = 42.1 bits (21), Expect = 7.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 262 tatgactacatcattgtcggcggaggcac 290 ||||||||||||||||| ||||| ||||| Sbjct: 136 tatgactacatcattgtgggcggtggcac 164
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2010 tcatgtggatatatatatata 2030 ||||||||||||||||||||| Sbjct: 13423542 tcatgtggatatatatatata 13423522
>gb|AC189500.1| Brassica rapa subsp. pekinensis clone KBrB086N06, complete sequence Length = 144247 Score = 42.1 bits (21), Expect = 7.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 265 gactacatcattgtcggcggaggcacggccggatgcccattggccgcaacgct 317 |||||||| || ||||||||||| ||||| ||||| ||| | ||||| ||||| Sbjct: 29073 gactacataatcgtcggcggaggaacggcgggatgtccactcgccgccacgct 29021
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 958 gccggcgcaattggaagcccccagc 982 |||||||||| |||||||||||||| Sbjct: 2143278 gccggcgcaactggaagcccccagc 2143254
>gb|AC163285.3| Mus musculus BAC clone RP23-379H2 from chromosome 16, complete sequence Length = 184951 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2011 catgtggatatatatatatac 2031 ||||||||||||||||||||| Sbjct: 116702 catgtggatatatatatatac 116682
>gb|AC078993.20| Homo sapiens Xp BAC RP11-431J24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 214001 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aaagacaaggaagaaaaacaa 95 ||||||||||||||||||||| Sbjct: 1762 aaagacaaggaagaaaaacaa 1782
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 42.1 bits (21), Expect = 7.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 260 cgtatgactacatcattgtcggcggaggcacggccgg 296 |||||||||||||||| ||||||| ||| ||||||| Sbjct: 175260 cgtatgactacatcatcgtcggcgccggctcggccgg 175224
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 42.1 bits (21), Expect = 7.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 260 cgtatgactacatcattgtcggcggaggcacggccgg 296 |||||||||||||||| ||||||| ||| ||||||| Sbjct: 94007 cgtatgactacatcatcgtcggcgccggctcggccgg 93971
>gb|AF127021.1|AF127021 Zea mays T7-like RNA polymerase (rpoT1) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 3643 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 tggaaaagacaaggaagaaaaacaa 95 |||| |||||||||||||||||||| Sbjct: 1045 tggagaagacaaggaagaaaaacaa 1069
>gb|AC009461.5|AC009461 Drosophila melanogaster, chromosome 3R, region 90B-90C, BAC clone BACR11L13, complete sequence Length = 171612 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2010 tcatgtggatatatatatata 2030 ||||||||||||||||||||| Sbjct: 97313 tcatgtggatatatatatata 97293
>gb|AC009742.4|AC009742 Drosophila melanogaster, chromosome 3R, region 90C-90C, BAC clone BACR21K03, complete sequence Length = 178100 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2010 tcatgtggatatatatatata 2030 ||||||||||||||||||||| Sbjct: 31826 tcatgtggatatatatatata 31806
>emb|BX571833.6| Zebrafish DNA sequence from clone DKEY-287J13, complete sequence Length = 198050 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2006 ccattcatgtggatatatatatata 2030 |||| |||||||||||||||||||| Sbjct: 72735 ccatacatgtggatatatatatata 72711
>dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1093 tccgtatttatacccaccaag 1113 ||||||||||||||||||||| Sbjct: 2249245 tccgtatttatacccaccaag 2249265
>gb|AC004025.1|AC004025 Homo sapiens Xp22 BAC GS-321G17 (Genome Systems Human BAC library) complete sequence Length = 188730 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 aaagacaaggaagaaaaacaa 95 ||||||||||||||||||||| Sbjct: 159981 aaagacaaggaagaaaaacaa 160001
>gb|AC003014.1|AC003014 Human PAC clone RP1-290B4 from Xq23, complete sequence Length = 76169 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1934 atagtaatttttgaagagatt 1954 ||||||||||||||||||||| Sbjct: 28556 atagtaatttttgaagagatt 28576
>gb|AC154427.2| Mus musculus BAC clone RP24-200D20 from 16, complete sequence Length = 163687 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2011 catgtggatatatatatatac 2031 ||||||||||||||||||||| Sbjct: 35081 catgtggatatatatatatac 35061
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1093 tccgtatttatacccaccaag 1113 ||||||||||||||||||||| Sbjct: 2324530 tccgtatttatacccaccaag 2324550
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 tgcaggatgcaggatgggatg 565 ||||||||||||||||||||| Sbjct: 177799 tgcaggatgcaggatgggatg 177819
>emb|AL731717.11| Mouse DNA sequence from clone RP23-92C4 on chromosome X, complete sequence Length = 234900 Score = 42.1 bits (21), Expect = 7.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2007 cattcatgtggatatatatatatac 2031 |||||||||| |||||||||||||| Sbjct: 166265 cattcatgtgcatatatatatatac 166289 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 401,360,977 Number of extensions: 31436893 Number of successful extensions: 151036 Number of sequences better than 10.0: 57 Number of HSP's gapped: 151002 Number of HSP's successfully gapped: 123 Length of query: 2049 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2026 Effective length of database: 18,503,978,556 Effective search space: 37489060554456 Effective search space used: 37489060554456 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
