ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf31p05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035C24, full insert sequence Length = 2015 Score = 1586 bits (800), Expect = 0.0 Identities = 1406/1608 (87%) Strand = Plus / Plus Query: 101 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 160 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 94 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 153 Query: 161 cgtccgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaagtcctcgct 220 ||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 154 cgtccgcacgcaaaacgtggtggcgtgccaggcggtggccaacatcgttaagtcctcgct 213 Query: 221 cggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaa 280 || ||||| ||||||||||||||||| |||||||| ||||| ||||| || || || || Sbjct: 214 tgggcccgtggggctcgacaagatgcttgtggatgatattggtgatgttaccataacaaa 273 Query: 281 tgacggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgt 340 ||| ||||| |||||| |||||||| |||| ||||||||||| || || |||||||| || Sbjct: 274 tgatggagcaaccattttgaggatgttggaagtcgagcatccagcagccaaggttcttgt 333 Query: 341 ggaattggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcat 400 || ||||||||||| |||||| | ||||| ||||||||||| || |||||||| || || Sbjct: 334 tgagttggctgagcttcaagacagagaggtgggagatggaacgacatctgttgtgataat 393 Query: 401 cgctgcagagttgctcaagagagccaatgatcttgtgaggaataagattcacccgacctc 460 || ||||| ||||| ||| | | ||||||||||||||| || || || || ||||| || Sbjct: 394 agccgcagaattgctaaagcggggcaatgatcttgtgagaaacaaaatccatccgacatc 453 Query: 461 tattattagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggaggaaaagct 520 |||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||| | Sbjct: 454 tattatcagtggctacaggcttgctatgcgtgaagcttgcaaatatgttgaagaaaagtt 513 Query: 521 gtctgtcaaggtggaaaaacttggaaaagactcccttataaactgtgcaaaaactagcat 580 | |||||||||| || ||||||||||| || || |||||||||||||| || || ||||| Sbjct: 514 ggctgtcaaggttgataaacttggaaaggattctcttataaactgtgcgaagacaagcat 573 Query: 581 gtcctcgaaactgattacaacggatgataatttctttgcaaatctggttgtagaagcagt 640 ||||||||| ||||||| | || | ||||||| |||||||||||||| || ||||| Sbjct: 574 gtcctcgaagctgattaatagtgacagtgatttcttcgcaaatctggttgtcgatgcagt 633 Query: 641 tcaagctgtgaagaccacaaactccaagggagaagtgaagtatccaatcaagagtattaa 700 ||||||||||||||||||||| | |||||||||||||||||||| |||||||| ||||| Sbjct: 634 ccaagctgtgaagaccacaaacgctaagggagaagtgaagtatcctatcaagagcattaa 693 Query: 701 tattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgct 760 ||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 694 tattttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcact 753 Query: 761 gaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttg 820 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| || Sbjct: 754 aaacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatg 813 Query: 821 tcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctga 880 ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||| Sbjct: 814 tcttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactga 873 Query: 881 tccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattga 940 |||||||||||| ||||| || ||| |||| ||||||||||||||||||||||||||||| Sbjct: 874 tccaagggaacttgagaaaattcgtcagagagaatctgacataacaaaggagcgaattga 933 Query: 941 gaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtc 1000 |||| |||| ||||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct: 934 gaaaattctgaaggctggtgctaatgttgtactgaccactaagggaattgatgatatgtc 993 Query: 1001 attgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggattt 1060 | |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 994 actgaagtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggattt 1053 Query: 1061 gcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggaggg 1120 |||||||||||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 1054 gcgccatgttgccaaggctactggtgcaactatggtatctacatttgctgatatggaagg 1113 Query: 1121 tgaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgaggaaaggat 1180 |||||| ||||| ||| | || || ||||||||||| || || || ||||||||||| || Sbjct: 1114 tgaagagacattcgattcatcgttccttggacatgctgatgaagttgttgaggaaagaat 1173 Query: 1181 ttctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtttccattat 1240 | |||||||||| ||||| | |||||||| ||||||||||| || || || || ||||| Sbjct: 1174 tgctgatgatgatgtaattttggtgaaaggaacaaagaacaccagcgctgtctcaattat 1233 Query: 1241 actcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgatgcact 1300 ||| ||||| |||||||||||||||||||| |||||||| | || ||||| |||||| | Sbjct: 1234 acttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgatgcatt 1293 Query: 1301 gtgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggtgctgtaga 1360 ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || || Sbjct: 1294 gtgcattgtgaagagaactctggaatccaatatggttgttgctggtggtggtgcagttga 1353 Query: 1361 agctgcattatctgtgtacctggagaatcttgctacaacccttggatccagggagcaact 1420 ||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||| || | Sbjct: 1354 agctgcattgtctgtatacttggagaatcttgctacaacccttgggtccagggaacagtt 1413 Query: 1421 ggcgattgctgaatttgcagagtctttgttgatcataccaaaggtccttgctgttaatgc 1480 ||| ||||||||||| || || |||||||| ||||| |||||||| ||| |||| ||||| Sbjct: 1414 ggccattgctgaattcgcggaatctttgttaatcattccaaaggttctttctgtcaatgc 1473 Query: 1481 cgcaaaagatgcaactgagcttgttgcaaagcttaggtcatatcatcataaagctcaaac 1540 ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| Sbjct: 1474 tgcaaaagatgcaactgagcttgtagcaaagcttagggcatatcatcatactgctcaaac 1533 Query: 1541 aaatgctgataagcagcacttatcaagcatgggtcttgatctgacaaaaggtgtaatccg 1600 ||| ||||||||||| ||||| ||||||||||||||||| || |||||||| | || || Sbjct: 1534 aaaggctgataagcaacacttttcaagcatgggtcttgacctttcaaaaggtatcattcg 1593 Query: 1601 caacaaccttgagcatggtgtgatcgagccagcaatgagcaaagtgaagatcattcagtt 1660 |||||||||||| ||||||| || |||||||||||||| ||||| ||||| |||||||| Sbjct: 1594 caacaaccttgaatatggtgtcattgagccagcaatgagtaaagtaaagattattcagtt 1653 Query: 1661 tgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 |||||| || || |||||||| || |||||||||||||||||||||| Sbjct: 1654 tgccactgaggcggccattactatcctgaggattgatgacatgatcaa 1701
>ref|NM_001060035.1| Oryza sativa (japonica cultivar-group) Os04g0551800 (Os04g0551800) mRNA, complete cds Length = 2014 Score = 1578 bits (796), Expect = 0.0 Identities = 1405/1608 (87%) Strand = Plus / Plus Query: 101 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 160 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 93 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 152 Query: 161 cgtccgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaagtcctcgct 220 ||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 153 cgtccgcacgcaaaacgtggtggcgtgccaggcggtggccaacatcgttaagtcctcgct 212 Query: 221 cggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaa 280 || ||||| ||||||||||||||||| |||||||| ||||| ||||| || || || || Sbjct: 213 tgggcccgtggggctcgacaagatgcttgtggatgatattggtgatgttaccataacaaa 272 Query: 281 tgacggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgt 340 ||| ||||| |||||| |||||||| |||| ||||||||||| || || |||||||| || Sbjct: 273 tgatggagcaaccattttgaggatgttggaagtcgagcatccagcagccaaggttcttgt 332 Query: 341 ggaattggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcat 400 || ||||||||||| |||||| | ||||| ||||||||||| || |||||||| || || Sbjct: 333 tgagttggctgagcttcaagacagagaggtgggagatggaacgacatctgttgtgataat 392 Query: 401 cgctgcagagttgctcaagagagccaatgatcttgtgaggaataagattcacccgacctc 460 || ||||| ||||| ||| | | ||||||||||||||| || || || || ||||| || Sbjct: 393 agccgcagaattgctaaagcggggcaatgatcttgtgagaaacaaaatccatccgacatc 452 Query: 461 tattattagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggaggaaaagct 520 |||||| ||||||||||||||||||||||||||||| ||||| ||||| || |||||| | Sbjct: 453 tattatcagtggctacaggcttgctatgcgtgaagcttgcaaatatgttgaagaaaagtt 512 Query: 521 gtctgtcaaggtggaaaaacttggaaaagactcccttataaactgtgcaaaaactagcat 580 | |||||||||| || ||||||||||| || || |||||||||||||| || || ||||| Sbjct: 513 ggctgtcaaggttgataaacttggaaaggattctcttataaactgtgcgaagacaagcat 572 Query: 581 gtcctcgaaactgattacaacggatgataatttctttgcaaatctggttgtagaagcagt 640 ||||||||| ||||||| | || | ||||||| |||||||||||||| || ||||| Sbjct: 573 gtcctcgaagctgattaatagtgacagtgatttcttcgcaaatctggttgtcgatgcagt 632 Query: 641 tcaagctgtgaagaccacaaactccaagggagaagtgaagtatccaatcaagagtattaa 700 ||||||||||||||||||||| | |||||||||||||||||||| |||||||| ||||| Sbjct: 633 ccaagctgtgaagaccacaaacgctaagggagaagtgaagtatcctatcaagagcattaa 692 Query: 701 tattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcgct 760 ||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 693 tattttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatgggtatgcact 752 Query: 761 gaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgcttg 820 ||||| |||||||| ||||||||||||||||| ||||||||||| || |||||||| || Sbjct: 753 aaacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaagaattgcatg 812 Query: 821 tcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatctga 880 ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||| Sbjct: 813 tcttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtccttgtaactga 872 Query: 881 tccaagggaactggagaagatccgtgagagggaatctgacataacaaaggagcgaattga 940 |||||||||||| ||||| || ||| |||| ||||||||||||||||||||||||||||| Sbjct: 873 tccaagggaacttgagaaaattcgtcagagagaatctgacataacaaaggagcgaattga 932 Query: 941 gaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgatgatatgtc 1000 |||| |||| ||||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct: 933 gaaaattctgaaggctggtgctaatgttgtactgaccactaagggaattgatgatatgtc 992 Query: 1001 attgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggattt 1060 | |||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 993 actgaagtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggattt 1052 Query: 1061 gcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgacatggaggg 1120 |||||||||||||||||| || ||||| || ||||| |||| |||||||| ||||| || Sbjct: 1053 gcgccatgttgccaaggctactggtgcaactatggtatctacatttgctgatatggaagg 1112 Query: 1121 tgaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgaggaaaggat 1180 |||||| ||||| ||| | || || ||||||||||| || || || ||||||||||| || Sbjct: 1113 tgaagagacattcgattcatcgttccttggacatgctgatgaagttgttgaggaaagaat 1172 Query: 1181 ttctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtttccattat 1240 | |||||||||| ||||| | |||||||| ||||||||||| || || || || ||||| Sbjct: 1173 tgctgatgatgatgtaattttggtgaaaggaacaaagaacaccagcgctgtctcaattat 1232 Query: 1241 actcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgatgcact 1300 ||| ||||| |||||||||||||||||||| |||||||| | || ||||| |||||| | Sbjct: 1233 acttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgatgcatt 1292 Query: 1301 gtgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggtgctgtaga 1360 ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| || || Sbjct: 1293 gtgcattgtgaagagaactctggaatccaatatggttgttgctggtggtggtgcagttga 1352 Query: 1361 agctgcattatctgtgtacctggagaatcttgctacaacccttggatccagggagcaact 1420 ||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||| || | Sbjct: 1353 agctgcattgtctgtatacttggagaatcttgctacaacccttgggtccagggaacagtt 1412 Query: 1421 ggcgattgctgaatttgcagagtctttgttgatcataccaaaggtccttgctgttaatgc 1480 ||| ||||||||||| || || |||||||| ||||| |||||||| ||| |||| ||||| Sbjct: 1413 ggccattgctgaattcgcggaatctttgttaatcattccaaaggttctttctgtcaatgc 1472 Query: 1481 cgcaaaagatgcaactgagcttgttgcaaagcttaggtcatatcatcataaagctcaaac 1540 ||||||||||||||||||||||| || ||||||||| |||||||||||| |||||||| Sbjct: 1473 tgcaaaagatgcaactgagcttgtagccaagcttagggcatatcatcatactgctcaaac 1532 Query: 1541 aaatgctgataagcagcacttatcaagcatgggtcttgatctgacaaaaggtgtaatccg 1600 ||| ||||||||||| ||||| ||||||||||||||||| || |||||||| | || || Sbjct: 1533 aaaggctgataagcaacacttttcaagcatgggtcttgacctttcaaaaggtatcattcg 1592 Query: 1601 caacaaccttgagcatggtgtgatcgagccagcaatgagcaaagtgaagatcattcagtt 1660 |||||||||||| ||||||| || |||||||||||||| ||||| ||||| |||||||| Sbjct: 1593 caacaaccttgaatatggtgtcattgagccagcaatgagtaaagtaaagattattcagtt 1652 Query: 1661 tgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 |||||| || || |||||||| || |||||||||||||||||||||| Sbjct: 1653 tgccactgaggcggccattactatcctgaggattgatgacatgatcaa 1700
>gb|AY104154.1| Zea mays PCO140702 mRNA sequence Length = 2014 Score = 1419 bits (716), Expect = 0.0 Identities = 1405/1632 (86%), Gaps = 2/1632 (0%) Strand = Plus / Plus Query: 94 ccgccgccgccatggcgatcaccgc-ccaggtccccgacatcatgggcgagcgccagtcc 152 ||||||| |||||||||||||| || ||| |||| |||||| | ||||||||||||||| Sbjct: 104 ccgccgcagccatggcgatcacagcgccaactccc-gacatcctcggcgagcgccagtcc 162 Query: 153 ggccaggacgtccgcacccagaacgtatcggcgtgccaggcggtggccaacatcgtcaag 212 ||||||||||||||||| |||||||| ||| ||| ||||||||||||||||||||| Sbjct: 163 ggccaggacgtccgcacgcagaacgtgatggcttgcggggcggtggccaacatcgtcaaa 222 Query: 213 tcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacg 272 ||||||||||||||||| || |||||||||||||| ||||| || ||||| ||||| || Sbjct: 223 tcctcgctcggccccgttggtctcgacaagatgctagtggacgatattggtgatgttaca 282 Query: 273 atcacgaatgacggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaag 332 ||||| ||||| ||||| ||||| || | |||| |||| || |||||||| || || ||| Sbjct: 283 atcactaatgatggagcaaccatacttaagatgttggaagttgagcatccagccgccaag 342 Query: 333 gttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctgtt 392 ||||| || || ||||||||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 343 gttcttgttgagttggctgagctccaagatcgtgaggtaggagatggaactacttccgtt 402 Query: 393 gttatcatcgctgcagagttgctcaagagagccaatgatcttgtgaggaataagattcac 452 || ||||| || |||||||| |||||||||||||| |||||||||| ||||||||| || Sbjct: 403 gtcatcatagcggcagagttactcaagagagccaacgatcttgtgaagaataagatccat 462 Query: 453 ccgacctctattattagtggctacaggcttgctatgcgtgaagcatgcaagtatgtggag 512 || |||||||| || ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 463 ccaacctctataatcagtggctacaggcttgctatgcgtgaagcctgcaaatatgttgag 522 Query: 513 gaaaagctgtctgtcaaggtggaaaaacttggaaaagactcccttataaactgtgcaaaa 572 |||||| | | |||||||| || |||||||||||||| |||||||| |||| ||||||| Sbjct: 523 gaaaagttagcagtcaaggttgacaaacttggaaaagaatcccttatcaactctgcaaaa 582 Query: 573 actagcatgtcctcgaaactgattacaacggatgataatttctttgcaaatctggttgta 632 ||||||||||| |||||| |||||| | || | |||||||||||| | ||||||| Sbjct: 583 actagcatgtcttcgaaattgattaatagtgacagtgatttctttgcaactttggttgtt 642 Query: 633 gaagcagttcaagctgtgaagaccacaaactccaagggagaagtgaagtatccaatcaag 692 || ||||||||||| |||||||| ||||| |||||||||| ||||| |||||||||||| Sbjct: 643 gaggcagttcaagccgtgaagactacaaatgccaagggagacgtgaaatatccaatcaag 702 Query: 693 agtattaatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggt 752 || || ||||||||||| |||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 703 agcatcaatattttgaaagctcatggtaaaagcgccaaggatagttacctgttgaatggc 762 Query: 753 tatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctaga 812 ||||| || ||||| |||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 763 tatgcactaaacacaggccgtgcagctcaaggaatgcctacgagagtaactcctgctaga 822 Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 ||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||| ||| Sbjct: 823 attgcttgtcttgattttaaccttcagaagacaaaaatgcaacttggtgtccaagttctt 882 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 ||| |||||||||| ||||| |||||||| ||| |||| ||||||||||||||||||||| Sbjct: 883 gtaactgatccaagagaacttgagaagattcgtcagagagaatctgacataacaaaggag 942 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || || ||| ||||||||||||| ||||||||||| || ||||| |||||||||||| Sbjct: 943 cggatcgataaaattctcaaggctggagctaatgttgtgttgaccactaagggaattgat 1002 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 1003 gatatgtccttgaagtactttgttgaggctggagctattgcagtaaggcgtgtgcgcaag 1062 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || |||||||||||||||||||| || || ||||| || ||||||| ||| ||||| ||| Sbjct: 1063 gaagatttgcgccatgttgccaaagccactggtgcaactatggtgagtacatttgcagac 1122 Query: 1113 atggagggtgaagaaacatttgatccttcctttcttggacatgccgacgaggtcgttgag 1172 ||||| |||||||||||||||||| | || || ||||||||||| || || || || ||| Sbjct: 1123 atggaaggtgaagaaacatttgattcatcattccttggacatgctgatgaagttgtggag 1182 Query: 1173 gaaaggatttctgatgatgaaataattctagtgaaaggcacaaagaacacaagtgcggtt 1232 ||||| ||| |||||||||| | ||||| |||||||||||||||||||| || ||||| Sbjct: 1183 gaaagaattgctgatgatgatgttattctggtgaaaggcacaaagaacaccagcgcggtc 1242 Query: 1233 tccattatactcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcac 1292 || || ||||| || || |||||||||| |||||| || |||||||||||||| ||||| Sbjct: 1243 tctataatacttaggggcgcaaatgactacatgcttgatgagattgaacggtccttgcat 1302 Query: 1293 gatgcactgtgcattgtgaagagaactttggaatccaatacggtagttgctggtggtggt 1352 ||||| |||||||||||||||||||| ||||||| |||| ||| |||||||| |||||| Sbjct: 1303 gatgccctgtgcattgtgaagagaaccctggaatcaaatatggttgttgctgggggtggt 1362 Query: 1353 gctgtagaagctgcattatctgtgtacctggagaatcttgctacaacccttggatccagg 1412 || || |||||||| | || || || |||||||| ||||| |||||||| || || || Sbjct: 1363 gcagttgaagctgcgctgtcagtttatctggagaaccttgcaacaaccctgggttctcgg 1422 Query: 1413 gagcaactggcgattgctgaatttgcagagtctttgttgatcataccaaaggtccttgct 1472 || ||| |||| |||||||||||||| ||||||||||| |||||||||||||| || || Sbjct: 1423 gaacaattggcaattgctgaatttgctgagtctttgttaatcataccaaaggtactatct 1482 Query: 1473 gttaatgccgcaaaagatgcaactgagcttgttgcaaagcttaggtcatatcatcataaa 1532 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 1483 gttaatgctgcaaaagatgcaactgagcttgtagcaaagcttagggcatatcatcatact 1542 Query: 1533 gctcaaacaaatgctgataagcagcacttatcaagcatgggtcttgatctgacaaaaggt 1592 ||||||||||| || || ||||| || | ||||| ||||| ||||| || | |||||| Sbjct: 1543 gctcaaacaaaggccgacaagcaacattattcaagtatgggccttgacctctctaaaggt 1602 Query: 1593 gtaatccgcaacaaccttgagcatggtgtgatcgagccagcaatgagcaaagtgaagatc 1652 | || ||||||||||||||| |||| ||||| |||||| | ||||||||||||||||| Sbjct: 1603 atcattcgcaacaaccttgagtatggcgtgatagagccatctatgagcaaagtgaagatt 1662 Query: 1653 attcagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagctt 1712 |||||||||||||| || || |||||||| || |||||||||| ||||||||||||||| Sbjct: 1663 attcagtttgccacggaggctgccattactatactgaggattgacgacatgatcaagctt 1722 Query: 1713 gacaaggaagag 1724 |||||||||| Sbjct: 1723 accaaggaagag 1734
>dbj|D17782.1|RICKN3218 Oryza sativa KN32 mRNA for T complex polypeptide, partial sequence Length = 485 Score = 347 bits (175), Expect = 1e-91 Identities = 329/375 (87%), Gaps = 4/375 (1%) Strand = Plus / Plus Query: 1287 ttgcacgatgcactgtgcattgtgaagagaactttggaatccaatacggtagttgctggt 1346 ||||| |||||| |||||||||||||||||||| |||||||||||| ||| ||||||||| Sbjct: 10 ttgcatgatgcattgtgcattgtgaagagaactctggaatccaatatggttgttgctggt 69 Query: 1347 ggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaacccttgga 1406 |||||||| || ||||||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 70 ggtggtgcagttgaagctgcattgtctgtatacttggagaatcttgctacaacccttgg- 128 Query: 1407 tccagggagcaactggcgattgctgaatttgcagagtctttgttgatcataccaaaggtc 1466 |||||||| || |||| ||||||||||| || || |||||||| ||||| |||||||| Sbjct: 129 tccagggaacagttggccattgctgaattcgcggaatctttgttaatcattccaaaggtt 188 Query: 1467 cttgctgttaatgccgcaaaagatgcaactgagcttgttgcaaagcttaggtcatatcat 1526 ||| |||| ||||| ||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 189 ctttctgtcaatgctgcaaaagatgcaactgagcttgtagcaaagcttagggcatatcat 248 Query: 1527 cataaagctcaaacaaatgctgataagcagcacttatcaagcatgggtcttgatctgaca 1586 |||| ||||||||||| |||||||| || ||||| ||||||||||||||||| || || Sbjct: 249 catactgctcaaacaaaggctgataa-caacacttttcaagcatgggtcttgacctttca 307 Query: 1587 aaaggtgtaatccgcaacaaccttgagcatggtgtgatcgagccagcaatgagcaaagtg 1646 |||||| | || |||||||||||||| |||| || || |||||||||||||| ||||| Sbjct: 308 aaaggtat-attcgcaacaaccttgaatatggggtcattgagccagcaatgagtaaagta 366 Query: 1647 aagatcattcagttt 1661 ||||| ||||||||| Sbjct: 367 aagat-attcagttt 380
>dbj|AB073552.1| Bruguiera sexangula bstcp-1 mRNA for t-complex polypeptide 1, complete cds Length = 2060 Score = 280 bits (141), Expect = 2e-71 Identities = 705/893 (78%) Strand = Plus / Plus Query: 681 tatccaatcaagagtattaatattttgaaggctcatggtaaaagtgccaaggaaagttac 740 ||||| ||||||||||| ||||||||||| |||||||| |||||||| | || || | | Sbjct: 657 tatcctatcaagagtataaatattttgaaagctcatggaaaaagtgcaagagatagctgc 716 Query: 741 ctgctgaatggttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagta 800 || ||||||| ||||| || || ||||| |||||||||||||| ||||||| ||||| Sbjct: 717 cttttgaatggctatgctctcaatactggtcgtgctgctcaagggatgcctatgagagtt 776 Query: 801 acccctgctagaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggt 860 | ||||| || |||||||||||||| || || |||||||| ||||| |||||| ||||| Sbjct: 777 gcacctgcaaggattgcttgtcttgactttaatcttcagaaaacgaagatgcaattgggt 836 Query: 861 gttcaagtccttgtatctgatccaagggaactggagaagatccgtgagagggaatctgac 920 || |||||| | || ||||||| ||||| || || | || ||| | || ||| |||| Sbjct: 837 gtacaagtcttagtcactgatcccagggagcttgaaagaattcgtcaaagagaagctgat 896 Query: 921 ataacaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgtatttaccacc 980 || |||||||| || ||||||||| | || || ||||| || |||||||| | ||||| Sbjct: 897 atgacaaaggaacggattgagaaactcctgaaagctggagcaaatgttgttctaaccaca 956 Query: 981 aagggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagtaaga 1040 |||||||||||||| ||| || | || || ||||| |||||||| || ||||| || ||| Sbjct: 957 aagggaattgatgacatggcacttaaatattttgtggaggctggggctattgctgtgaga 1016 Query: 1041 cgtgtgcgtaaggaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgact 1100 ||||| || || |||||| |||||||||||||||||||||| ||||| ||| |||| | Sbjct: 1017 cgtgttcggaaagaggatatgcgccatgttgccaaggcaactggtgcaacactggtttca 1076 Query: 1101 acttttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccgac 1160 || |||||||||||||| || || |||||||||||| | || | |||||||| || || Sbjct: 1077 acatttgctgacatggaaggagaggaaacatttgattcatcactgcttggacaagctgaa 1136 Query: 1161 gaggtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaagaac 1220 || || || ||||| | ||| ||||||| || | ||| | | ||||| ||||||| Sbjct: 1137 gaagttgtggaggagcgcattgctgatgacgatgtgattatgataaaagggacaaagact 1196 Query: 1221 acaagtgcggtttccattatactcagaggagcaaatgacttcatgctagacgagattgaa 1280 ||||||||||||||| | || || | || |||||||||| ||||| || ||||| || Sbjct: 1197 acaagtgcggtttccttgattcttcgtggtgcaaatgactatatgctcgatgagatggag 1256 Query: 1281 cggtctttgcacgatgcactgtgcattgtgaagagaactttggaatccaatacggtagtt 1340 || | |||| ||||| | || ||||| |||||||| | ||||| ||||| |||||| Sbjct: 1257 cgagccctgcatgatgctttatgtattgtcaagagaacccttgaatctaatacagtagtt 1316 Query: 1341 gctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaacc 1400 || ||||| |||||||| || ||||| || |||||| || ||||| | || |||||||| Sbjct: 1317 gcaggtggaggtgctgttgaggctgccttgtctgtgcacttggagtacctcgctacaact 1376 Query: 1401 cttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcatacca 1460 ||||| || | ||||| | || || || || |||||||| || |||||||| |||||| Sbjct: 1377 cttgggtcacgagagcagttagcaatagcagagtttgcagaatccttgttgattatacca 1436 Query: 1461 aaggtccttgctgttaatgccgcaaaagatgcaactgagcttgttgcaaagcttaggtca 1520 ||||| |||||||| ||||| || |||||||| ||||| | | |||||| || || | Sbjct: 1437 aaggttcttgctgtcaatgctgccaaagatgccactgaattagctgcaaaactccgggct 1496 Query: 1521 tatcatcataaagctcaaacaaatgctgataagcagcacttatcaagcatggg 1573 || || |||| ||| |||||||| ||||||||| | || |||||||||||||| Sbjct: 1497 taccaccatacagcacaaacaaaggctgataagaaacatttatcaagcatggg 1549 Score = 264 bits (133), Expect = 1e-66 Identities = 370/449 (82%) Strand = Plus / Plus Query: 138 ggcgagcgccagtccggccaggacgtccgcacccagaacgtatcggcgtgccaggcggtg 197 ||||| || ||||||||||||||||||||||| || || || ||| || || ||||| Sbjct: 114 ggcgaacgtcagtccggccaggacgtccgcactcaaaatgtggtggcatgtcaagcggtt 173 Query: 198 gccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgac 257 ||||| || ||||| || || || || || ||||| |||||||||||||| |||||||| Sbjct: 174 gccaatattgtcaaatcttcacttggtcctgtcggactcgacaagatgctagtggatgat 233 Query: 258 attggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcgag 317 ||||| ||||| || || || ||||| || || || ||||| | |||| | || || ||| Sbjct: 234 attggtgatgtaacaattacaaatgatggtgctacgattcttaagatgttagaagtagag 293 Query: 318 catcccgcggcaaaggttctcgtggaattggctgagctccaagaccgggaggttggagat 377 ||||| || |||||||| |||||||| ||||||||||| |||||||| || ||||||||| Sbjct: 294 catcctgcagcaaaggtgctcgtggagttggctgagcttcaagaccgagaagttggagat 353 Query: 378 ggaactacctctgttgttatcatcgctgcagagttgctcaagagagccaatgatcttgtg 437 ||||| || || ||||| ||||| || || ||||||||||||||||| |||||||| ||| Sbjct: 354 ggaaccacttcggttgtcatcatagcagctgagttgctcaagagagcaaatgatctcgtg 413 Query: 438 aggaataagattcacccgacctctattattagtggctacaggcttgctatgcgtgaagca 497 ||||||||||| ||||| || || || || ||||| ||||||||||||||| | |||||| Sbjct: 414 aggaataagatccacccaacatcaataatcagtggatacaggcttgctatgagggaagca 473 Query: 498 tgcaagtatgtggaggaaaagctgtctgtcaaggtggaaaaacttggaaaagactccctt 557 ||||||||||| || || || |||| | ||||| ||||| ||||||||||| || || Sbjct: 474 tgcaagtatgttgaagagaaattgtcaatgaaggttgaaaagcttggaaaagattctcta 533 Query: 558 ataaactgtgcaaaaactagcatgtcctc 586 ||||||||||||| || ||||||||||| Sbjct: 534 gtaaactgtgcaaagacaagcatgtcctc 562 Score = 81.8 bits (41), Expect = 9e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 1632 gcaatgagcaaagtgaagatcattcagtttgccacagaagcagccattaccattgtgagg 1691 |||||||||||| | ||||| ||||||||||| || ||||||||||| || ||| | | Sbjct: 1608 gcaatgagcaaaataaagataattcagtttgctactgaagcagccataacaattcttcga 1667 Query: 1692 attgatgacatgatcaagcttgacaagga 1720 |||||||||||||||||||||| |||||| Sbjct: 1668 attgatgacatgatcaagcttgtcaagga 1696
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 272 bits (137), Expect = 5e-69 Identities = 200/221 (90%) Strand = Plus / Plus Query: 691 agagtattaatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatg 750 |||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||| Sbjct: 27613645 agagcattaatattttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatg 27613704 Query: 751 gttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgcta 810 | ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || | Sbjct: 27613705 ggtatgcactaaacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaa 27613764 Query: 811 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 870 ||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 27613765 gaattgcatgtcttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtcc 27613824 Query: 871 ttgtatctgatccaagggaactggagaagatccgtgagagg 911 ||||| |||||||||||||||| ||||| || ||| ||||| Sbjct: 27613825 ttgtaactgatccaagggaacttgagaaaattcgtcagagg 27613865 Score = 143 bits (72), Expect = 3e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 912 gaatctgacataacaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgta 971 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 27614094 gaatctgacataacaaaggagcgaattgagaaaattctgaaggctggtgctaatgttgta 27614153 Query: 972 tttaccaccaagggaattgatgatatgtcattgaag 1007 | ||||| ||||||||||||||||||||| ||||| Sbjct: 27614154 ctgaccactaagggaattgatgatatgtcactgaag 27614189 Score = 135 bits (68), Expect = 7e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 1338 gttgctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctaca 1397 ||||||||||||||||| || ||||||||||| ||||| ||| ||||||||||||||||| Sbjct: 27615720 gttgctggtggtggtgcagttgaagctgcattgtctgtatacttggagaatcttgctaca 27615779 Query: 1398 acccttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcata 1457 |||||||| |||||||| || |||| ||||||||||| || || |||||||| ||||| Sbjct: 27615780 acccttgggtccagggaacagttggccattgctgaattcgcggaatctttgttaatcatt 27615839 Query: 1458 ccaaaggt 1465 |||||||| Sbjct: 27615840 ccaaaggt 27615847 Score = 125 bits (63), Expect = 7e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 27614603 agtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttgcgcc 27614662 Query: 1066 atgttgccaaggcaacaggtgcgacaatggt 1096 ||||||||||||| || ||||| || ||||| Sbjct: 27614663 atgttgccaaggctactggtgcaactatggt 27614693 Score = 115 bits (58), Expect = 6e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 1236 attatactcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgat 1295 |||||||| ||||| |||||||||||||||||||| |||||||| | || ||||| ||| Sbjct: 27615127 attatacttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgat 27615186 Query: 1296 gcactgtgcattgtgaagagaactttggaatccaatacggta 1337 ||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 27615187 gcattgtgcattgtgaagagaactctggaatccaatatggta 27615228 Score = 115 bits (58), Expect = 6e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 1462 aggtccttgctgttaatgccgcaaaagatgcaactgagcttgttgcaaagcttaggtcat 1521 |||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||||| ||| Sbjct: 27615923 aggttctttctgtcaatgctgcaaaagatgcaactgagcttgtagccaagcttagggcat 27615982 Query: 1522 atcatcataaagctcaaacaaatgctgataagcagcacttatcaag 1567 ||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 27615983 atcatcatactgctcaaacaaaggctgataagcaacacttttcaag 27616028 Score = 105 bits (53), Expect = 6e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 101 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 160 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 27611435 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 27611494 Query: 161 cgtccgcac 169 ||||||||| Sbjct: 27611495 cgtccgcac 27611503 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 182 ggcgtgccaggcggtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaa 241 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 27611650 ggcgtgccaggcggtggccaacatcgttaagtcctcgcttgggcccgtggggctcgacaa 27611709 Query: 242 g 242 | Sbjct: 27611710 g 27611710 Score = 87.7 bits (44), Expect = 1e-13 Identities = 104/124 (83%) Strand = Plus / Plus Query: 1099 ctacttttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccg 1158 |||| |||||||| ||||| |||||||| ||||| ||| | || || ||||||||||| | Sbjct: 27614896 ctacatttgctgatatggaaggtgaagagacattcgattcatcgttccttggacatgctg 27614955 Query: 1159 acgaggtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaaga 1218 | || || ||||||||||| ||| |||||||||| ||||| | |||||||| ||||||| Sbjct: 27614956 atgaagttgttgaggaaagaattgctgatgatgatgtaattttggtgaaaggaacaaaga 27615015 Query: 1219 acac 1222 |||| Sbjct: 27615016 acac 27615019 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 626 ggttgtagaagcagttcaagctgtgaagaccacaaactccaagggagaagtgaagtatcc 685 |||||| || ||||| ||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 27613148 ggttgtcgatgcagtccaagctgtgaagaccacaaacgctaagggagaagtgaagtatcc 27613207 Query: 686 aatcaag 692 |||||| Sbjct: 27613208 tatcaag 27613214 Score = 81.8 bits (41), Expect = 9e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1566 agcatgggtcttgatctgacaaaaggtgtaatccgcaacaaccttgagcatggtgtgatc 1625 |||||||||||||| || |||||||| | || |||||||||||||| ||||||| || Sbjct: 27616596 agcatgggtcttgacctttcaaaaggtatcattcgcaacaaccttgaatatggtgtcatt 27616655 Query: 1626 gagccagcaatgagcaaagtgaagatcattcag 1658 |||||||||||||| ||||| ||||| |||||| Sbjct: 27616656 gagccagcaatgagtaaagtaaagattattcag 27616688 Score = 67.9 bits (34), Expect = 1e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 241 agatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctga 300 ||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| ||| Sbjct: 27612104 agatgcttgtggatgatattggtgatgttaccataacaaatgatggagcaaccattttga 27612163 Query: 301 ggatgctggaggtcgagcatcc 322 ||||| |||| ||||||||||| Sbjct: 27612164 ggatgttggaagtcgagcatcc 27612185 Score = 65.9 bits (33), Expect = 5e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 537 aaacttggaaaagactcccttataaactgtgcaaaaactagcatgtcctcgaaactgatt 596 ||||||||||| || || |||||||||||||| || || |||||||||||||| |||||| Sbjct: 27612775 aaacttggaaaggattctcttataaactgtgcgaagacaagcatgtcctcgaagctgatt 27612834 Query: 597 a 597 | Sbjct: 27612835 a 27612835 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 479 gcttgctatgcgtgaagcatgcaagtatgtggaggaaaagctgtctgtcaaggt 532 |||||||||||||||||| ||||| ||||| || |||||| || |||||||||| Sbjct: 27612637 gcttgctatgcgtgaagcttgcaaatatgttgaagaaaagttggctgtcaaggt 27612690 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 331 aggttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctg 390 ||||||| || || ||||||||||| |||||| | ||||| ||||||||||| || |||| Sbjct: 27612282 aggttcttgttgagttggctgagcttcaagacagagaggtgggagatggaacgacatctg 27612341 Query: 391 ttgttatcatcgctgcagagttgct 415 |||| || || || ||||| ||||| Sbjct: 27612342 ttgtgataatagccgcagaattgct 27612366 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1656 cagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 ||||||||||| || || |||||||| || |||||||||||||||||||||| Sbjct: 27616771 cagtttgccactgaggcggccattactatcctgaggattgatgacatgatcaa 27616823 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 425 caatgatcttgtgaggaataagattcacccgacctctattattagtggctacagg 479 ||||||||||||||| || || || || ||||| |||||||| |||||||||||| Sbjct: 27612474 caatgatcttgtgagaaacaaaatccatccgacatctattatcagtggctacagg 27612528
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 272 bits (137), Expect = 5e-69 Identities = 200/221 (90%) Strand = Plus / Plus Query: 691 agagtattaatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatg 750 |||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||| Sbjct: 44274 agagcattaatattttgaaagcccatggtaaaagtgccaaggacagttacctgctgaatg 44333 Query: 751 gttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgcta 810 | ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || | Sbjct: 44334 ggtatgcactaaacacaggccgtgcagctcaaggaatgcctactagagtaaccccggcaa 44393 Query: 811 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 870 ||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 44394 gaattgcatgtcttgattttaaccttcagaagacaaaaatgcaattgggtgttcaagtcc 44453 Query: 871 ttgtatctgatccaagggaactggagaagatccgtgagagg 911 ||||| |||||||||||||||| ||||| || ||| ||||| Sbjct: 44454 ttgtaactgatccaagggaacttgagaaaattcgtcagagg 44494 Score = 143 bits (72), Expect = 3e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 912 gaatctgacataacaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgta 971 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 44723 gaatctgacataacaaaggagcgaattgagaaaattctgaaggctggtgctaatgttgta 44782 Query: 972 tttaccaccaagggaattgatgatatgtcattgaag 1007 | ||||| ||||||||||||||||||||| ||||| Sbjct: 44783 ctgaccactaagggaattgatgatatgtcactgaag 44818 Score = 135 bits (68), Expect = 7e-28 Identities = 113/128 (88%) Strand = Plus / Plus Query: 1338 gttgctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctaca 1397 ||||||||||||||||| || ||||||||||| ||||| ||| ||||||||||||||||| Sbjct: 46349 gttgctggtggtggtgcagttgaagctgcattgtctgtatacttggagaatcttgctaca 46408 Query: 1398 acccttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcata 1457 |||||||| |||||||| || |||| ||||||||||| || || |||||||| ||||| Sbjct: 46409 acccttgggtccagggaacagttggccattgctgaattcgcggaatctttgttaatcatt 46468 Query: 1458 ccaaaggt 1465 |||||||| Sbjct: 46469 ccaaaggt 46476 Score = 125 bits (63), Expect = 7e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 45232 agtacttcgttgaggctggagcaattgctgtaaggcgtgtgcgtaaggaggatttgcgcc 45291 Query: 1066 atgttgccaaggcaacaggtgcgacaatggt 1096 ||||||||||||| || ||||| || ||||| Sbjct: 45292 atgttgccaaggctactggtgcaactatggt 45322 Score = 115 bits (58), Expect = 6e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 1236 attatactcagaggagcaaatgacttcatgctagacgagattgaacggtctttgcacgat 1295 |||||||| ||||| |||||||||||||||||||| |||||||| | || ||||| ||| Sbjct: 45756 attatacttagaggcgcaaatgacttcatgctagatgagattgacagatcattgcatgat 45815 Query: 1296 gcactgtgcattgtgaagagaactttggaatccaatacggta 1337 ||| |||||||||||||||||||| |||||||||||| |||| Sbjct: 45816 gcattgtgcattgtgaagagaactctggaatccaatatggta 45857 Score = 115 bits (58), Expect = 6e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 1462 aggtccttgctgttaatgccgcaaaagatgcaactgagcttgttgcaaagcttaggtcat 1521 |||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||||| ||| Sbjct: 46552 aggttctttctgtcaatgctgcaaaagatgcaactgagcttgtagccaagcttagggcat 46611 Query: 1522 atcatcataaagctcaaacaaatgctgataagcagcacttatcaag 1567 ||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 46612 atcatcatactgctcaaacaaaggctgataagcaacacttttcaag 46657 Score = 105 bits (53), Expect = 6e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 101 cgccatggcgatcaccgcccaggtccccgacatcatgggcgagcgccagtccggccagga 160 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 42064 cgccatggcgatcaccgcccagacccccgacatcctcggcgagcgccagtccggccagga 42123 Query: 161 cgtccgcac 169 ||||||||| Sbjct: 42124 cgtccgcac 42132 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 182 ggcgtgccaggcggtggccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaa 241 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 42279 ggcgtgccaggcggtggccaacatcgttaagtcctcgcttgggcccgtggggctcgacaa 42338 Query: 242 g 242 | Sbjct: 42339 g 42339 Score = 87.7 bits (44), Expect = 1e-13 Identities = 104/124 (83%) Strand = Plus / Plus Query: 1099 ctacttttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccg 1158 |||| |||||||| ||||| |||||||| ||||| ||| | || || ||||||||||| | Sbjct: 45525 ctacatttgctgatatggaaggtgaagagacattcgattcatcgttccttggacatgctg 45584 Query: 1159 acgaggtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaaga 1218 | || || ||||||||||| ||| |||||||||| ||||| | |||||||| ||||||| Sbjct: 45585 atgaagttgttgaggaaagaattgctgatgatgatgtaattttggtgaaaggaacaaaga 45644 Query: 1219 acac 1222 |||| Sbjct: 45645 acac 45648 Score = 85.7 bits (43), Expect = 6e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 626 ggttgtagaagcagttcaagctgtgaagaccacaaactccaagggagaagtgaagtatcc 685 |||||| || ||||| ||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 43777 ggttgtcgatgcagtccaagctgtgaagaccacaaacgctaagggagaagtgaagtatcc 43836 Query: 686 aatcaag 692 |||||| Sbjct: 43837 tatcaag 43843 Score = 81.8 bits (41), Expect = 9e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 1566 agcatgggtcttgatctgacaaaaggtgtaatccgcaacaaccttgagcatggtgtgatc 1625 |||||||||||||| || |||||||| | || |||||||||||||| ||||||| || Sbjct: 47225 agcatgggtcttgacctttcaaaaggtatcattcgcaacaaccttgaatatggtgtcatt 47284 Query: 1626 gagccagcaatgagcaaagtgaagatcattcag 1658 |||||||||||||| ||||| ||||| |||||| Sbjct: 47285 gagccagcaatgagtaaagtaaagattattcag 47317 Score = 67.9 bits (34), Expect = 1e-07 Identities = 70/82 (85%) Strand = Plus / Plus Query: 241 agatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctga 300 ||||||| |||||||| ||||| ||||| || || || ||||| ||||| |||||| ||| Sbjct: 42733 agatgcttgtggatgatattggtgatgttaccataacaaatgatggagcaaccattttga 42792 Query: 301 ggatgctggaggtcgagcatcc 322 ||||| |||| ||||||||||| Sbjct: 42793 ggatgttggaagtcgagcatcc 42814 Score = 65.9 bits (33), Expect = 5e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 537 aaacttggaaaagactcccttataaactgtgcaaaaactagcatgtcctcgaaactgatt 596 ||||||||||| || || |||||||||||||| || || |||||||||||||| |||||| Sbjct: 43404 aaacttggaaaggattctcttataaactgtgcgaagacaagcatgtcctcgaagctgatt 43463 Query: 597 a 597 | Sbjct: 43464 a 43464 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 479 gcttgctatgcgtgaagcatgcaagtatgtggaggaaaagctgtctgtcaaggt 532 |||||||||||||||||| ||||| ||||| || |||||| || |||||||||| Sbjct: 43266 gcttgctatgcgtgaagcttgcaaatatgttgaagaaaagttggctgtcaaggt 43319 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 331 aggttctcgtggaattggctgagctccaagaccgggaggttggagatggaactacctctg 390 ||||||| || || ||||||||||| |||||| | ||||| ||||||||||| || |||| Sbjct: 42911 aggttcttgttgagttggctgagcttcaagacagagaggtgggagatggaacgacatctg 42970 Query: 391 ttgttatcatcgctgcagagttgct 415 |||| || || || ||||| ||||| Sbjct: 42971 ttgtgataatagccgcagaattgct 42995 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 1656 cagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 ||||||||||| || || |||||||| || |||||||||||||||||||||| Sbjct: 47400 cagtttgccactgaggcggccattactatcctgaggattgatgacatgatcaa 47452 Score = 54.0 bits (27), Expect = 0.002 Identities = 48/55 (87%) Strand = Plus / Plus Query: 425 caatgatcttgtgaggaataagattcacccgacctctattattagtggctacagg 479 ||||||||||||||| || || || || ||||| |||||||| |||||||||||| Sbjct: 43103 caatgatcttgtgagaaacaaaatccatccgacatctattatcagtggctacagg 43157
>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050) mRNA, complete cds Length = 2022 Score = 163 bits (82), Expect = 3e-36 Identities = 265/326 (81%) Strand = Plus / Plus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 842 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 901 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 902 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 961 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || |||||| ||||||| ||||| || ||||| || | ||||| ||||| ||||| Sbjct: 962 cggatagagaaacttctcaaagctggggccaatgtagttctgaccacaaaggggattgac 1021 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1022 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1081 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1082 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1141 Query: 1113 atggagggtgaagaaacatttgatcc 1138 |||||||| ||||||||||||||||| Sbjct: 1142 atggagggcgaagaaacatttgatcc 1167 Score = 85.7 bits (43), Expect = 6e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 225 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 284 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 254 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 313 Query: 285 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 344 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 314 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 373 Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 404 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 374 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 433 Query: 405 gcagagttgctcaagagagccaatgat 431 || |||||| | ||||| || |||||| Sbjct: 434 gctgagttgttgaagagggcaaatgat 460 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1649 gtgatcgaaccagctatgagcaaagtgaaaattatccagtttgcaacagaggcagccata 1708 Query: 1680 accattgtgaggattgatgacatgatcaa 1708 || ||| | | ||||| ||||||||||| Sbjct: 1709 acgattctacgaattgacgacatgatcaa 1737 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 1326 tccaatacggtagttgctggtggtggtgctgtagaagctgcattatctgtgtacctggag 1385 ||||| ||||| ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| Sbjct: 1355 tccaacacggtggttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggag 1414 Query: 1386 aatcttgctacaacc 1400 | |||||||||||| Sbjct: 1415 caccttgctacaacc 1429 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 587 ataaactgtgccaaaaccagcatgtcctccaaactgat 624
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 159 bits (80), Expect = 5e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 699 aatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcg 758 ||||| |||||||| |||||||||||||||| || || | || ||||||||||||| Sbjct: 69562 aatatattgaaggcacatggtaaaagtgccagagacagctttttgatgaatggttatgct 69621 Query: 759 ctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgct 818 || || ||||| |||||||| |||||||||||| || ||| ||||||||| ||||||| Sbjct: 69622 cttaatactggacgtgctgcccaaggaatgcctcttagggtatcccctgctaaaattgct 69681 Query: 819 tgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatct 878 |||||||||||||| ||||||||||| ||||||||| ||||||||||||| | || ||| Sbjct: 69682 tgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttcaagtattagtttct 69741 Query: 879 gatccaagggaactggagaa 898 ||||| |||||||| ||||| Sbjct: 69742 gatcccagggaactcgagaa 69761 Score = 85.7 bits (43), Expect = 6e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 70604 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 70663 Query: 1066 atgttgccaaggcaacaggtgcgacaatggt 1096 |||||||||| ||||| ||||| ||| |||| Sbjct: 70664 atgttgccaaagcaaccggtgcaacattggt 70694 Score = 61.9 bits (31), Expect = 8e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 418 agagagccaatgatcttgtgaggaataagattcacccgacctctattattagtgg 472 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 67253 agagagcaaatgatcttgttaggaataagattcatccaacctcgattatcagtgg 67307 Score = 58.0 bits (29), Expect = 1e-04 Identities = 101/125 (80%) Strand = Plus / Plus Query: 1341 gctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaacc 1400 |||||||| |||||||| ||||| |||||||| || ||| |||| | ||||||||||| Sbjct: 73456 gctggtggaggtgctgtcgaagcagcattatcagtttacttggaataccttgctacaact 73515 Query: 1401 cttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcatacca 1460 || ||||| ||||||| |||| || || || ||||| || ||| |||| ||||| ||| Sbjct: 73516 ctaggatcgcgggagcagttggctatagcagagtttgccgaatctctgttaatcattcca 73575 Query: 1461 aaggt 1465 ||||| Sbjct: 73576 aaggt 73580 Score = 44.1 bits (22), Expect = 1.9 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1655 tcagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagcttga 1714 ||||||||| || ||||| || ||||| ||| | ||||||| || ||||||||||||| Sbjct: 74588 tcagtttgcaactgaagctgctattactattctccggattgacgatatgatcaagcttgt 74647 Query: 1715 caagga 1720 |||||| Sbjct: 74648 caagga 74653 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 626 ggttgtagaagcagttcaagctgtgaaga 654 ||||||||||||||| |||||||| |||| Sbjct: 69314 ggttgtagaagcagtgcaagctgtaaaga 69342
>gb|AC141106.9| Medicago truncatula clone mth2-33e18, complete sequence Length = 105951 Score = 159 bits (80), Expect = 5e-35 Identities = 170/200 (85%) Strand = Plus / Plus Query: 699 aatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcg 758 ||||| |||||||| |||||||||||||||| || || | || ||||||||||||| Sbjct: 1394 aatatattgaaggcacatggtaaaagtgccagagacagctttttgatgaatggttatgct 1453 Query: 759 ctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgct 818 || || ||||| |||||||| |||||||||||| || ||| ||||||||| ||||||| Sbjct: 1454 cttaatactggacgtgctgcccaaggaatgcctcttagggtatcccctgctaaaattgct 1513 Query: 819 tgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatct 878 |||||||||||||| ||||||||||| ||||||||| ||||||||||||| | || ||| Sbjct: 1514 tgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttcaagtattagtttct 1573 Query: 879 gatccaagggaactggagaa 898 ||||| |||||||| ||||| Sbjct: 1574 gatcccagggaactcgagaa 1593 Score = 85.7 bits (43), Expect = 6e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 2436 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 2495 Query: 1066 atgttgccaaggcaacaggtgcgacaatggt 1096 |||||||||| ||||| ||||| ||| |||| Sbjct: 2496 atgttgccaaagcaaccggtgcaacattggt 2526 Score = 58.0 bits (29), Expect = 1e-04 Identities = 101/125 (80%) Strand = Plus / Plus Query: 1341 gctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaacc 1400 |||||||| |||||||| ||||| |||||||| || ||| |||| | ||||||||||| Sbjct: 5288 gctggtggaggtgctgtcgaagcagcattatcagtttacttggaataccttgctacaact 5347 Query: 1401 cttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcatacca 1460 || ||||| ||||||| |||| || || || ||||| || ||| |||| ||||| ||| Sbjct: 5348 ctaggatcgcgggagcagttggctatagcagagtttgccgaatctctgttaatcattcca 5407 Query: 1461 aaggt 1465 ||||| Sbjct: 5408 aaggt 5412 Score = 44.1 bits (22), Expect = 1.9 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1655 tcagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagcttga 1714 ||||||||| || ||||| || ||||| ||| | ||||||| || ||||||||||||| Sbjct: 6420 tcagtttgcaactgaagctgctattactattctccggattgacgatatgatcaagcttgt 6479 Query: 1715 caagga 1720 |||||| Sbjct: 6480 caagga 6485 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 626 ggttgtagaagcagttcaagctgtgaaga 654 ||||||||||||||| |||||||| |||| Sbjct: 1146 ggttgtagaagcagtgcaagctgtaaaga 1174
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 159 bits (80), Expect = 5e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 699 aatattttgaaggctcatggtaaaagtgccaaggaaagttacctgctgaatggttatgcg 758 ||||| |||||||| |||||||||||||||| || || | || ||||||||||||| Sbjct: 5079 aatatattgaaggcacatggtaaaagtgccagagacagctttttgatgaatggttatgct 5020 Query: 759 ctgaacactggccgtgctgctcaaggaatgcctaccagagtaacccctgctagaattgct 818 || || ||||| |||||||| |||||||||||| || ||| ||||||||| ||||||| Sbjct: 5019 cttaatactggacgtgctgcccaaggaatgcctcttagggtatcccctgctaaaattgct 4960 Query: 819 tgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgtatct 878 |||||||||||||| ||||||||||| ||||||||| ||||||||||||| | || ||| Sbjct: 4959 tgtcttgatttcaatcttcagaagacaaaaatgcaattgggtgttcaagtattagtttct 4900 Query: 879 gatccaagggaactggagaa 898 ||||| |||||||| ||||| Sbjct: 4899 gatcccagggaactcgagaa 4880 Score = 85.7 bits (43), Expect = 6e-13 Identities = 79/91 (86%) Strand = Plus / Minus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 ||||||||||||||||||| |||||||| || ||||||||||| || || ||| |||| | Sbjct: 4037 agtactttgttgaggctggtgcaattgctgtgagacgtgtgcggaaagaagatatgcgtc 3978 Query: 1066 atgttgccaaggcaacaggtgcgacaatggt 1096 |||||||||| ||||| ||||| ||| |||| Sbjct: 3977 atgttgccaaagcaaccggtgcaacattggt 3947 Score = 61.9 bits (31), Expect = 8e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 418 agagagccaatgatcttgtgaggaataagattcacccgacctctattattagtgg 472 ||||||| ||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 7388 agagagcaaatgatcttgttaggaataagattcatccaacctcgattatcagtgg 7334 Score = 58.0 bits (29), Expect = 1e-04 Identities = 101/125 (80%) Strand = Plus / Minus Query: 1341 gctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaacc 1400 |||||||| |||||||| ||||| |||||||| || ||| |||| | ||||||||||| Sbjct: 1185 gctggtggaggtgctgtcgaagcagcattatcagtttacttggaataccttgctacaact 1126 Query: 1401 cttggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcatacca 1460 || ||||| ||||||| |||| || || || ||||| || ||| |||| ||||| ||| Sbjct: 1125 ctaggatcgcgggagcagttggctatagcagagtttgccgaatctctgttaatcattcca 1066 Query: 1461 aaggt 1465 ||||| Sbjct: 1065 aaggt 1061 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 626 ggttgtagaagcagttcaagctgtgaaga 654 ||||||||||||||| |||||||| |||| Sbjct: 5327 ggttgtagaagcagtgcaagctgtaaaga 5299
>gb|BT012800.1| Lycopersicon esculentum clone 113815R, mRNA sequence Length = 2210 Score = 157 bits (79), Expect = 2e-34 Identities = 307/383 (80%) Strand = Plus / Plus Query: 201 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 260 ||||||||||| || ||||| || || || || || || ||||||||||| ||||| ||| Sbjct: 233 aacatcgtcaaatcttcgcttggacctgttggccttgataagatgctcgttgatgatatt 292 Query: 261 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcgagcat 320 |||||||| || || || ||||| || || || |||||||||||| | || || |||||| Sbjct: 293 ggcgatgtaacaattactaatgatggtgctacaattctgaggatgttagaagttgagcat 352 Query: 321 cccgcggcaaaggttctcgtggaattggctgagctccaagaccgggaggttggagatgga 380 || || || |||||||| || || |||||||| || ||||| || || ||||| |||||| Sbjct: 353 ccagctgccaaggttcttgttgagttggctgaacttcaagatcgagaagttggtgatgga 412 Query: 381 actacctctgttgttatcatcgctgcagagttgctcaagagagccaatgatcttgtgagg 440 || ||||| |||||||| || |||||||| ||||| ||| |||| ||||| | ||||| Sbjct: 413 acaacctcagttgttattatagctgcagaattgcttaagggagcaaatgagttggtgaga 472 Query: 441 aataagattcacccgacctctattattagtggctacaggcttgctatgcgtgaagcatgc 500 | || |||||||| ||||| || || ||||| || ||||| || ||| | ||||||||| Sbjct: 473 cacaaaattcacccaacctcgatcatcagtggatataggctagcaatgagggaagcatgc 532 Query: 501 aagtatgtggaggaaaagctgtctgtcaaggtggaaaaacttggaaaagactcccttata 560 || ||||| || ||||| || |||| ||||| || || ||||||||||| || |||||| Sbjct: 533 aaatatgttgaagaaaaattggctgttaaggttgataagcttggaaaagattctcttata 592 Query: 561 aactgtgcaaaaactagcatgtc 583 ||||| || || || |||||||| Sbjct: 593 aactgcgccaagacaagcatgtc 615 Score = 151 bits (76), Expect = 1e-32 Identities = 385/488 (78%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgt 1043 ||||||||||| ||| || ||||||||||||| || ||||| || ||||| || |||||| Sbjct: 1016 ggaattgatgacatggcactgaagtactttgtggaagctggtgccattgcggtcagacgt 1075 Query: 1044 gtgcgtaaggaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactact 1103 || || || || ||||||||||||||||| |||||||| ||||| || |||| | || Sbjct: 1076 gtacgcaaagaagatttgcgccatgttgctaaggcaaccggtgcaactgtggtctcaaca 1135 Query: 1104 tttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgccgacgag 1163 |||||||| ||||| || |||||||| ||||| || || |||||||||||||| || ||| Sbjct: 1136 tttgctgatatggaaggagaagaaacttttgaaccatcatttcttggacatgctgatgag 1195 Query: 1164 gtcgttgaggaaaggatttctgatgatgaaataattctagtgaaaggcacaaagaacaca 1223 || || ||||| | ||| |||||||||| | ||| | || ||||| || || | | || Sbjct: 1196 gtggtggaggagcgaattgctgatgatgatgtgattatggttaaaggaaccaaaacctca 1255 Query: 1224 agtgcggtttccattatactcagaggagcaaatgacttcatgctagacgagattgaacgg 1283 ||| ||||||| | ||||| ||||| ||||||||||| ||||| |||||||| || || Sbjct: 1256 agttcggtttcattaatacttagaggtgcaaatgactttatgcttgacgagatggagagg 1315 Query: 1284 tctttgcacgatgcactgtgcattgtgaagagaactttggaatccaatacggtagttgct 1343 | | || ||||| | ||||||||||||||||| | || || | || || |||||| Sbjct: 1316 gccctccatgatgctttatgcattgtgaagagaacactagagtcaacaactgtcgttgct 1375 Query: 1344 ggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctacaaccctt 1403 |||||||| ||||| || || || |||| ||| ||| ||||| | || ||||| || ||| Sbjct: 1376 ggtggtggagctgttgaggccgctttatgtgtctacttggagtacctagctactactctt 1435 Query: 1404 ggatccagggagcaactggcgattgctgaatttgcagagtctttgttgatcataccaaag 1463 || || |||||||| ||||| ||||| ||||||| || || || | ||||||||||| Sbjct: 1436 gggtcaagggagcagctggctattgcacaatttgctgaatccttacttgtcataccaaag 1495 Query: 1464 gtccttgc 1471 || ||||| Sbjct: 1496 gttcttgc 1503 Score = 103 bits (52), Expect = 2e-18 Identities = 106/124 (85%) Strand = Plus / Plus Query: 745 tgaatggttatgcgctgaacactggccgtgctgctcaaggaatgcctaccagagtaaccc 804 |||| |||||||| ||||| |||||||||||||| |||||||||||| ||||| | | Sbjct: 777 tgaagggttatgcactgaatactggccgtgctgcccaaggaatgcctctgagagttgcgc 836 Query: 805 ctgctagaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttc 864 |||| | |||||||||||||| ||||| ||||| ||||| |||||||| |||||||||| Sbjct: 837 ctgcacggattgcttgtcttgacttcaatcttcaaaagacaaaaatgcagatgggtgttc 896 Query: 865 aagt 868 |||| Sbjct: 897 aagt 900 Score = 83.8 bits (42), Expect = 2e-12 Identities = 75/86 (87%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 ||||| ||||| |||||||||||||| || || || |||||||| ||||||||||| ||| Sbjct: 1652 gtgattgagcctgcaatgagcaaagtaaaaattatacagtttgctacagaagcagctatt 1711 Query: 1680 accattgtgaggattgatgacatgat 1705 |||||| |||| || ||||||||||| Sbjct: 1712 accattctgagaatcgatgacatgat 1737
>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding (ATTCP-1) mRNA, complete cds Length = 2063 Score = 155 bits (78), Expect = 7e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 844 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 903 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 904 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 963 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 964 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1023 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1024 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1083 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1084 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1143 Query: 1113 atggagggtgaagaaacatttgatcc 1138 |||||||| ||||||||||||||||| Sbjct: 1144 atggagggcgaagaaacatttgatcc 1169 Score = 85.7 bits (43), Expect = 6e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 225 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 284 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 256 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 315 Query: 285 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 344 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 316 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 375 Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 404 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 376 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 435 Query: 405 gcagagttgctcaagagagccaatgat 431 || |||||| | ||||| || |||||| Sbjct: 436 gctgagttgttgaagagggcaaatgat 462 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1651 gtgatcgaaccagctatgagcaaagtgaaaattatccagtttgcaacagaggcagccata 1710 Query: 1680 accattgtgaggattgatgacatgatcaa 1708 || ||| | | ||||| ||||||||||| Sbjct: 1711 acgattctacgaattgacgacatgatcaa 1739 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 1326 tccaatacggtagttgctggtggtggtgctgtagaagctgcattatctgtgtacctggag 1385 ||||| ||||| ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| Sbjct: 1357 tccaacacggtggttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggag 1416 Query: 1386 aatcttgctacaacc 1400 | |||||||||||| Sbjct: 1417 caccttgctacaacc 1431 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 589 ataaactgtgccaaaaccagcatgtcctccaaactgat 626
>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete cds Length = 2024 Score = 155 bits (78), Expect = 7e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 843 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 902 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 903 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 962 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 963 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1022 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1023 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1082 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1083 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1142 Query: 1113 atggagggtgaagaaacatttgatcc 1138 |||||||| ||||||||||||||||| Sbjct: 1143 atggagggcgaagaaacatttgatcc 1168 Score = 85.7 bits (43), Expect = 6e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 225 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 284 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 255 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 314 Query: 285 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 344 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 315 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 374 Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 404 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 375 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 434 Query: 405 gcagagttgctcaagagagccaatgat 431 || |||||| | ||||| || |||||| Sbjct: 435 gctgagttgttgaagagggcaaatgat 461 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1650 gtgatcgaaccagctatgagcaaagtgaaaattatccagtttgcaacagaggcagccata 1709 Query: 1680 accattgtgaggattgatgacatgatcaa 1708 || ||| | | ||||| ||||||||||| Sbjct: 1710 acgattctacgaattgacgacatgatcaa 1738 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 1326 tccaatacggtagttgctggtggtggtgctgtagaagctgcattatctgtgtacctggag 1385 ||||| ||||| ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| Sbjct: 1356 tccaacacggtggttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggag 1415 Query: 1386 aatcttgctacaacc 1400 | |||||||||||| Sbjct: 1416 caccttgctacaacc 1430 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 588 ataaactgtgccaaaaccagcatgtcctccaaactgat 625
>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds Length = 1718 Score = 155 bits (78), Expect = 7e-34 Identities = 264/326 (80%) Strand = Plus / Plus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 |||||||| ||||| ||||| || |||||||| |||||||| ||||||| ||||| || Sbjct: 760 attgcttgccttgacttcaatctgcagaagacaaaaatgcagctgggtgtccaagttgtt 819 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 820 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 879 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 880 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 939 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 940 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 999 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1000 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1059 Query: 1113 atggagggtgaagaaacatttgatcc 1138 |||||||| ||||||||||||||||| Sbjct: 1060 atggagggcgaagaaacatttgatcc 1085 Score = 85.7 bits (43), Expect = 6e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 225 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 284 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 172 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 231 Query: 285 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 344 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 232 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 291 Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 404 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 292 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 351 Query: 405 gcagagttgctcaagagagccaatgat 431 || |||||| | ||||| || |||||| Sbjct: 352 gctgagttgttgaagagggcaaatgat 378 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1567 gtgatcgaaccagctatgagcaaagtgaaaattatccagtttgcaacagaggcagccata 1626 Query: 1680 accattgtgaggattgatgacatgatcaa 1708 || ||| | | ||||| ||||||||||| Sbjct: 1627 acgattctacgaattgacgacatgatcaa 1655 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 1326 tccaatacggtagttgctggtggtggtgctgtagaagctgcattatctgtgtacctggag 1385 ||||| ||||| ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| Sbjct: 1273 tccaacacggtggttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggag 1332 Query: 1386 aatcttgctacaacc 1400 | |||||||||||| Sbjct: 1333 caccttgctacaacc 1347 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 505 ataaactgtgccaaaaccagcatgtcctccaaactgat 542
>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1961 Score = 139 bits (70), Expect = 4e-29 Identities = 262/326 (80%) Strand = Plus / Plus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcctt 872 |||||||| ||||| ||||| || |||||||| || |||| ||||||| ||||| || Sbjct: 828 attgcttgccttgacttcaatctgcagaagacaaaggtgcagctgggtgtccaagttgtt 887 Query: 873 gtatctgatccaagggaactggagaagatccgtgagagggaatctgacataacaaaggag 932 || ||| ||| | ||||| || ||||||||| | || ||| ||||||| ||||| ||| Sbjct: 888 gttaatgacccacgagaacttgaaaagatccgtcaaagagaagctgacatgacaaaagag 947 Query: 933 cgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaagggaattgat 992 || || |||||| ||||||| ||||| || ||||| | | ||||| ||||| ||||| Sbjct: 948 cggatagagaaacttctcaaagctggggccaatgtaattctgaccacaaaggggattgac 1007 Query: 993 gatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaag 1052 || ||| || | || |||||||| ||||| ||||| ||||| || || |||||||| || Sbjct: 1008 gacatggcacttaaatactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaa 1067 Query: 1053 gaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactacttttgctgac 1112 || || |||| |||||||||||||| ||||| ||||| |||| || |||||||||||| Sbjct: 1068 gaagacatgcgtcatgttgccaaggcgacaggagcgactctggtcaccacttttgctgac 1127 Query: 1113 atggagggtgaagaaacatttgatcc 1138 |||||||| ||||||||||||||||| Sbjct: 1128 atggagggcgaagaaacatttgatcc 1153 Score = 85.7 bits (43), Expect = 6e-13 Identities = 166/207 (80%) Strand = Plus / Plus Query: 225 cccgtcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgac 284 |||||||| |||||||||||| | |||||||| ||||| ||||| || || || ||||| Sbjct: 240 cccgtcggcctcgacaagatgttggtggatgatattggtgatgtgactattacaaatgat 299 Query: 285 ggagccaccattctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaa 344 || || || ||||| |||||| ||||||||||||| || || || |||||||| || || Sbjct: 300 ggtgctactattcttaggatgttggaggtcgagcaccctgctgctaaggttcttgtcgag 359 Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgttatcatcgct 404 || ||||| || ||||| | || || || ||||| ||||| ||||||||||| | ||| Sbjct: 360 ttagctgaacttcaagatagagaagtcggtgatgggactacatctgttgttattgtagct 419 Query: 405 gcagagttgctcaagagagccaatgat 431 || |||||| | ||||| || |||||| Sbjct: 420 gctgagttgttgaagagggcaaatgat 446 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaagatcattcagtttgccacagaagcagccatt 1679 |||||||| ||||| |||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1635 gtgatcgaaccagctatgagcaaagtgaaaattatccagtttgcaacagaggcagccata 1694 Query: 1680 accattgtgaggattgatgacatgatcaa 1708 || ||| | | ||||| ||||||||||| Sbjct: 1695 acgattctacgaattgacgacatgatcaa 1723 Score = 54.0 bits (27), Expect = 0.002 Identities = 63/75 (84%) Strand = Plus / Plus Query: 1326 tccaatacggtagttgctggtggtggtgctgtagaagctgcattatctgtgtacctggag 1385 ||||| ||||| ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| Sbjct: 1341 tccaacacggtggttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggag 1400 Query: 1386 aatcttgctacaacc 1400 | |||||||||||| Sbjct: 1401 caccttgctacaacc 1415 Score = 44.1 bits (22), Expect = 1.9 Identities = 34/38 (89%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||| | ||||||||||| |||||||| Sbjct: 573 ataaactgtgccaaagccagcatgtcctccaaactgat 610
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 119 bits (60), Expect = 4e-23 Identities = 81/88 (92%) Strand = Plus / Minus Query: 811 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 870 ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 2617890 gaattgcatgtcttggtttcaaccttcagaagacaaaagtgcaattgggtgttcaagtcc 2617831 Query: 871 ttgtatctgatccaagggaactggagaa 898 ||||| |||||||||||||||| ||||| Sbjct: 2617830 ttgtaactgatccaagggaacttgagaa 2617803 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Minus Query: 919 acataacaaaggagcgaattgagaaagttct 949 |||||||||||||||||||||||||| |||| Sbjct: 2617794 acataacaaaggagcgaattgagaaaattct 2617764
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 119 bits (60), Expect = 4e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 811 gaattgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtcc 870 ||||||| ||||||| |||||||||||||||||| ||| ||||| ||||||||||||||| Sbjct: 50119 gaattgcatgtcttggtttcaaccttcagaagacaaaagtgcaattgggtgttcaagtcc 50178 Query: 871 ttgtatctgatccaagggaactggagaa 898 ||||| |||||||||||||||| ||||| Sbjct: 50179 ttgtaactgatccaagggaacttgagaa 50206 Score = 54.0 bits (27), Expect = 0.002 Identities = 30/31 (96%) Strand = Plus / Plus Query: 919 acataacaaaggagcgaattgagaaagttct 949 |||||||||||||||||||||||||| |||| Sbjct: 50215 acataacaaaggagcgaattgagaaaattct 50245
>emb|CT028620.1| Poplar cDNA sequences Length = 557 Score = 113 bits (57), Expect = 2e-21 Identities = 189/233 (81%) Strand = Plus / Plus Query: 924 acaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaag 983 |||||||| || ||||||||| | | || ||||| || |||||||| || || || ||| Sbjct: 78 acaaaggaacgcattgagaaactcttgaaagctggagcaaatgttgtgttaactacaaag 137 Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgt 1043 ||||||||||| ||| | | ||||| ||||| |||||||| || ||||| || |||||| Sbjct: 138 ggaattgatgacatggcccttaagtattttgtggaggctggggctattgctgtgagacgt 197 Query: 1044 gtgcgtaaggaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactact 1103 || | ||||||||| |||||||||||||||||||||| ||||| ||| |||| | || Sbjct: 198 gttaggaaggaggatatgcgccatgttgccaaggcaactggtgcaacattggtttcaaca 257 Query: 1104 tttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgc 1156 |||||||| ||||| || || ||||||||||| || || ||||| ||| |||| Sbjct: 258 tttgctgatatggaaggggaggaaacatttgagccatcatttctgggatatgc 310
>emb|CT028619.1| Poplar cDNA sequences Length = 556 Score = 113 bits (57), Expect = 2e-21 Identities = 189/233 (81%) Strand = Plus / Minus Query: 924 acaaaggagcgaattgagaaagttctcaaggctggtgctaatgttgtatttaccaccaag 983 |||||||| || ||||||||| | | || ||||| || |||||||| || || || ||| Sbjct: 480 acaaaggaacgcattgagaaactcttgaaagctggagcaaatgttgtgttaactacaaag 421 Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagtaagacgt 1043 ||||||||||| ||| | | ||||| ||||| |||||||| || ||||| || |||||| Sbjct: 420 ggaattgatgacatggcccttaagtattttgtggaggctggggctattgctgtgagacgt 361 Query: 1044 gtgcgtaaggaggatttgcgccatgttgccaaggcaacaggtgcgacaatggtgactact 1103 || | ||||||||| |||||||||||||||||||||| ||||| ||| |||| | || Sbjct: 360 gttaggaaggaggatatgcgccatgttgccaaggcaactggtgcaacattggtttcaaca 301 Query: 1104 tttgctgacatggagggtgaagaaacatttgatccttcctttcttggacatgc 1156 |||||||| ||||| || || ||||||||||| || || ||||| ||| |||| Sbjct: 300 tttgctgatatggaaggggaggaaacatttgagccatcatttctgggatatgc 248
>ref|XM_758108.1| Theileria parva strain Muguga chromosome 3 T-complex protein 1 subunit alpha (TP03_0183) partial mRNA Length = 1647 Score = 75.8 bits (38), Expect = 5e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 982 agggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcag 1035 ||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 863 agggaattgatgatatgtcgatgaagtactttgttgaagctggagtaattgcag 916
>gb|BC044397.1| Danio rerio t-complex polypeptide 1, mRNA (cDNA clone MGC:55424 IMAGE:2639388), complete cds Length = 1951 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 201 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 260 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||||||||| Sbjct: 153 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggatgacatc 212 Query: 261 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 316 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 213 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 268
>ref|NM_131230.1| Danio rerio t-complex polypeptide 1 (tcp1), mRNA gb|AF143493.1|AF143493 Danio rerio t-complex polypeptide 1 (TCP1) mRNA, complete cds Length = 1897 Score = 71.9 bits (36), Expect = 8e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 201 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 260 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||||||||| Sbjct: 95 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggatgacatc 154 Query: 261 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 316 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 155 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 210
>ref|NM_170016.1| Drosophila melanogaster Tcp1-like CG5374-RB, transcript variant B (T-cp1), mRNA Length = 1928 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 169 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 228 Query: 297 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 356 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 229 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 288 Query: 357 caagaccgggaggttggagatggaactacctctgttgttatc 398 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 289 caggacgaggaggtcggcgatggcactacctcggtggttatc 330 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1589 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1643 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 935 tgaagtacttcgttgaggctggagc 959
>ref|NM_079726.3| Drosophila melanogaster Tcp1-like CG5374-RA, transcript variant A (T-cp1), mRNA Length = 1992 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 233 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 292 Query: 297 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 356 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 293 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 352 Query: 357 caagaccgggaggttggagatggaactacctctgttgttatc 398 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 353 caggacgaggaggtcggcgatggcactacctcggtggttatc 394 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1653 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1707 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 999 tgaagtacttcgttgaggctggagc 1023
>ref|XM_752333.1| Ustilago maydis 521 hypothetical protein (UM01279.1) partial mRNA Length = 1677 Score = 67.9 bits (34), Expect = 1e-07 Identities = 64/74 (86%) Strand = Plus / Plus Query: 198 gccaacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgac 257 |||||||| ||||| || || ||||| ||||| || ||||||||||||||||| |||||| Sbjct: 112 gccaacattgtcaaatcttccctcggtcccgtaggactcgacaagatgctcgtcgatgac 171 Query: 258 attggcgatgtcac 271 || || |||||||| Sbjct: 172 atcggagatgtcac 185
>gb|AY118416.1| Drosophila melanogaster RE70560 full insert cDNA Length = 1992 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 237 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 296 Query: 297 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 356 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 297 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 356 Query: 357 caagaccgggaggttggagatggaactacctctgttgttatc 398 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 357 caggacgaggaggtcggcgatggcactacctcggtggttatc 398 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1657 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1711 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 1003 tgaagtacttcgttgaggctggagc 1027
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Minus Query: 1101 acttttgctgacatggagggtgaagaaacatttgatcc 1138 |||||||||||||||||||| ||||||||||||||||| Sbjct: 19908 acttttgctgacatggagggcgaagaaacatttgatcc 19871 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Minus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 |||||||||| ||||| ||||| ||||| || || |||||||| || || || |||| | Sbjct: 20082 agtactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaagaagacatgcgtc 20023 Query: 1066 atgttgccaaggcaacaggtgcgac 1090 ||||||||||||| ||||| ||||| Sbjct: 20022 atgttgccaaggcgacaggagcgac 19998 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 21184 ataaactgtgccaaaaccagcatgtcctccaaactgat 21147 Score = 46.1 bits (23), Expect = 0.48 Identities = 53/63 (84%) Strand = Plus / Minus Query: 1338 gttgctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctaca 1397 ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| | ||||||||| Sbjct: 19431 gttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggagcaccttgctaca 19372 Query: 1398 acc 1400 ||| Sbjct: 19371 acc 19369 Score = 46.1 bits (23), Expect = 0.48 Identities = 59/71 (83%) Strand = Plus / Minus Query: 249 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 308 |||||||| ||||| ||||| || || || ||||| || || || ||||| |||||| || Sbjct: 21951 gtggatgatattggtgatgtgactattacaaatgatggtgctactattcttaggatgttg 21892 Query: 309 gaggtcgagca 319 ||||||||||| Sbjct: 21891 gaggtcgagca 21881 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1620 gtgatcgagccagcaatgagcaaagtgaa 1648 |||||||| ||||| |||||||||||||| Sbjct: 18971 gtgatcgaaccagctatgagcaaagtgaa 18943
>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds Length = 6533 Score = 67.9 bits (34), Expect = 1e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 1101 acttttgctgacatggagggtgaagaaacatttgatcc 1138 |||||||||||||||||||| ||||||||||||||||| Sbjct: 4274 acttttgctgacatggagggcgaagaaacatttgatcc 4311 Score = 58.0 bits (29), Expect = 1e-04 Identities = 71/85 (83%) Strand = Plus / Plus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 |||||||||| ||||| ||||| ||||| || || |||||||| || || || |||| | Sbjct: 4100 agtactttgtagaggcaggagctattgctgttaggcgtgtgcgcaaagaagacatgcgtc 4159 Query: 1066 atgttgccaaggcaacaggtgcgac 1090 ||||||||||||| ||||| ||||| Sbjct: 4160 atgttgccaaggcgacaggagcgac 4184 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 2998 ataaactgtgccaaaaccagcatgtcctccaaactgat 3035 Score = 46.1 bits (23), Expect = 0.48 Identities = 59/71 (83%) Strand = Plus / Plus Query: 249 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 308 |||||||| ||||| ||||| || || || ||||| || || || ||||| |||||| || Sbjct: 2225 gtggatgatattggtgatgtgactattacaaatgatggtgctactattcttaggatgttg 2284 Query: 309 gaggtcgagca 319 ||||||||||| Sbjct: 2285 gaggtcgagca 2295 Score = 46.1 bits (23), Expect = 0.48 Identities = 53/63 (84%) Strand = Plus / Plus Query: 1338 gttgctggtggtggtgctgtagaagctgcattatctgtgtacctggagaatcttgctaca 1397 ||||| ||||| ||||| || ||| | ||||| |||||||| |||||| | ||||||||| Sbjct: 4751 gttgcgggtggaggtgcagttgaatcagcattgtctgtgtatctggagcaccttgctaca 4810 Query: 1398 acc 1400 ||| Sbjct: 4811 acc 4813 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1620 gtgatcgagccagcaatgagcaaagtgaa 1648 |||||||| ||||| |||||||||||||| Sbjct: 5211 gtgatcgaaccagctatgagcaaagtgaa 5239
>gb|M21159.1|DROTCP1 D.melanogaster T complex protein 1 (Tcp-1) mRNA, complete cds Length = 1928 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 175 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 234 Query: 297 ctgaggatgctggaggtcgagcatcccgcggcaaaggttctcgtggaattggctgagctc 356 ||| | |||||||||| ||||| || || || ||||| || || || ||||| |||| Sbjct: 235 ctgcgactgctggaggtggagcacccggcagccaaggtcctggttgagctggctcagctg 294 Query: 357 caagaccgggaggttggagatggaactacctctgttgttatc 398 || ||| |||||| || ||||| |||||||| || |||||| Sbjct: 295 caggacgaggaggtcggcgatggcactacctcggtggttatc 336 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1595 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1649 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 941 tgaagtacttcgttgaggctggagc 965
>gb|BC066538.1| Danio rerio t-complex polypeptide 1, mRNA (cDNA clone MGC:77497 IMAGE:6524710), complete cds Length = 1909 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 201 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 260 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||| ||||| Sbjct: 95 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggacgacatc 154 Query: 261 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 316 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 155 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 210
>gb|AF164028.1|AF164028 Danio rerio clone TA2 t-complex polypeptide 1 (Tcp1) mRNA, partial cds Length = 1661 Score = 63.9 bits (32), Expect = 2e-06 Identities = 95/116 (81%) Strand = Plus / Plus Query: 201 aacatcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacatt 260 |||||||| ||| ||| ||||| |||||||| | ||||||||| | ||||| ||||| Sbjct: 33 aacatcgtgaagagctctctcggtcccgtcggattggacaagatgttggtggacgacatc 92 Query: 261 ggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctggaggtcga 316 || || || || ||||| |||||||| |||||||| |||| | ||||||||||||| Sbjct: 93 ggagacgtgaccatcaccaatgacggggccaccatcctgaagctgctggaggtcga 148
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 61.9 bits (31), Expect = 8e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 18316684 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 18316625 Query: 297 ctgaggatgctggaggtcgagca 319 ||| | |||||||||| ||||| Sbjct: 18316624 ctgcgactgctggaggtggagca 18316602 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 18315146 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 18315092 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 18315863 tgaagtacttcgttgaggctggagc 18315839
>gb|AC189359.1| Brassica rapa subsp. pekinensis clone KBrB044L16, complete sequence Length = 133781 Score = 61.9 bits (31), Expect = 8e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 1006 agtactttgttgaggctggagcaattgcagtaagacgtgtgcgtaaggaggatttgcgcc 1065 |||||||||| ||||| ||||| |||||||| || ||||| || || || || |||||| Sbjct: 91333 agtactttgtagaggcaggagctattgcagttaggcgtgttcgcaaagacgacatgcgcc 91274 Query: 1066 atgttgccaaggcaacagg 1084 ||||||| ||||||||||| Sbjct: 91273 atgttgctaaggcaacagg 91255 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 1101 acttttgctgacatggagggtgaagaaacatttgatcc 1138 ||||||||||||||||| || ||||||||||||||||| Sbjct: 91122 acttttgctgacatggaaggcgaagaaacatttgatcc 91085 Score = 56.0 bits (28), Expect = 5e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 813 attgcttgtcttgatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagt 868 |||||||| ||||| ||||| ||||||||||| |||||||| ||||||| ||||| Sbjct: 91787 attgcttgccttgacttcaatcttcagaagacaaaaatgcagctgggtgtccaagt 91732 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Minus Query: 369 gttggagatggaactacctctgttgttatcatcgctgcagagttgctcaag 419 ||||| ||||| ||||||||||||||||| | ||||| |||||||||||| Sbjct: 92849 gttggtgatgggactacctctgttgttattgtagctgctgagttgctcaag 92799 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 558 ataaactgtgcaaaaactagcatgtcctcgaaactgat 595 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 92311 ataaactgtgctaaaaccagcatgtcctccaaactgat 92274 Score = 50.1 bits (25), Expect = 0.031 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1656 cagtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 |||||||| ||||| ||||||||||| ||| |||| || || ||||||||||| Sbjct: 90037 cagtttgcaacagaggcagccattacgattctgagaatcgacgacatgatcaa 89985 Score = 48.1 bits (24), Expect = 0.12 Identities = 66/80 (82%) Strand = Plus / Minus Query: 240 aagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctg 299 |||||| | |||||||| ||||| ||||| || || || || ||||| || || ||||| Sbjct: 93049 aagatgttggtggatgatattggtgatgtgaccattacaaacgacggtgctactattctc 92990 Query: 300 aggatgctggaggtcgagca 319 |||||| ||||||||||||| Sbjct: 92989 aggatgttggaggtcgagca 92970 Score = 44.1 bits (22), Expect = 1.9 Identities = 64/78 (82%) Strand = Plus / Minus Query: 1365 gcattatctgtgtacctggagaatcttgctacaacccttggatccagggagcaactggcg 1424 ||||| |||||||| ||||| | |||||||||||| | || || | || ||| |||| Sbjct: 90585 gcattgtctgtgtatctggaacaccttgctacaaccttgggctctcgcgaacaattggca 90526 Query: 1425 attgctgaatttgcagag 1442 |||||||||||||||||| Sbjct: 90525 attgctgaatttgcagag 90508
>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence Length = 164501 Score = 61.9 bits (31), Expect = 8e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 67067 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 67008 Query: 297 ctgaggatgctggaggtcgagca 319 ||| | |||||||||| ||||| Sbjct: 67007 ctgcgactgctggaggtggagca 66985 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 65529 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 65475 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 66246 tgaagtacttcgttgaggctggagc 66222
>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence Length = 179562 Score = 61.9 bits (31), Expect = 8e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 237 gacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggagccaccatt 296 ||||||||||| ||||| ||||| ||||||||||| | || || || |||||||||||| Sbjct: 119780 gacaagatgctggtggacgacatcggcgatgtcacagtgaccaacgatggagccaccatt 119721 Query: 297 ctgaggatgctggaggtcgagca 319 ||| | |||||||||| ||||| Sbjct: 119720 ctgcgactgctggaggtggagca 119698 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Minus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 118242 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 118188 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 118959 tgaagtacttcgttgaggctggagc 118935
>gb|BC068901.1| Xenopus laevis t-complex polypeptide 1, mRNA (cDNA clone MGC:83095 IMAGE:6317335), complete cds Length = 1867 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgac 1700 ||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 1602 agtttgctacagaagccgccattactattctgaggattgatgac 1645 Score = 46.1 bits (23), Expect = 0.48 Identities = 41/47 (87%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 415 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 314 gttggagatggtacaacatccgttgttatcattgctgcagagctgct 360
>gb|AF143494.1|AF143494 Xenopus laevis t-complex polypeptide 1 (TCP1) mRNA, complete cds Length = 1821 Score = 56.0 bits (28), Expect = 5e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgac 1700 ||||||| |||||||| |||||||| ||| |||||||||||||| Sbjct: 1578 agtttgctacagaagccgccattactattctgaggattgatgac 1621 Score = 46.1 bits (23), Expect = 0.48 Identities = 41/47 (87%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 415 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 290 gttggagatggtacaacatccgttgttatcattgctgcagagctgct 336
>ref|NW_001091934.1| Theileria annulata strain Ankara clone C6 Length = 1898942 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Minus Query: 982 agggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcag 1035 ||||||| ||||||||||| |||| ||||||||||| ||||||| ||||||| Sbjct: 371769 agggaatcgatgatatgtcgatgaaatactttgttgaagctggagtgattgcag 371716
>ref|NM_122097.2| Arabidopsis thaliana ATP binding / protein binding (AT5G20890) mRNA, complete cds Length = 2126 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 440 gaggttggtgatggaactacctctgttgtt 469
>gb|AY062651.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1960 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 440 gaggttggtgatggaactacctctgttgtt 469
>gb|AY054210.1| Arabidopsis thaliana AT5g20890/F22D1_60 mRNA, complete cds Length = 1971 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 435 gaggttggtgatggaactacctctgttgtt 464
>gb|AY085104.1| Arabidopsis thaliana clone 12972 mRNA, complete sequence Length = 1955 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 435 gaggttggtgatggaactacctctgttgtt 464
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Minus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 32964 gaggttggtgatggaactacctctgttgtt 32935
>ref|XM_949787.1| Theileria annulata strain Ankara t-complex polypeptide 1 (TA03225) partial mRNA Length = 1647 Score = 52.0 bits (26), Expect = 0.008 Identities = 47/54 (87%) Strand = Plus / Plus Query: 982 agggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcag 1035 ||||||| ||||||||||| |||| ||||||||||| ||||||| ||||||| Sbjct: 863 agggaatcgatgatatgtcgatgaaatactttgttgaagctggagtgattgcag 916
>gb|BT002090.1| Arabidopsis thaliana Unknown protein (At5g20890) mRNA, complete cds Length = 1660 Score = 52.0 bits (26), Expect = 0.008 Identities = 29/30 (96%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||||||| ||||||||||||||||||||| Sbjct: 265 gaggttggtgatggaactacctctgttgtt 294
>gb|AC189660.2| Gallus gallus BAC clone CH261-84J8 from chromosome z, complete sequence Length = 176080 Score = 50.1 bits (25), Expect = 0.031 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1814 tgcttgtgattttccttttcttcct 1838 ||||||||||||||||||||||||| Sbjct: 57799 tgcttgtgattttccttttcttcct 57775
>ref|XM_964078.1| PREDICTED: Tribolium castaneum similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC657631), mRNA Length = 1759 Score = 50.1 bits (25), Expect = 0.031 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1677 attaccattgtgaggattgatgacatgatcaag 1709 ||||||||| |||| |||||||||||||||||| Sbjct: 1573 attaccattttgagaattgatgacatgatcaag 1605
>ref|XM_500945.1| Yarrowia lipolytica CLIB122, YALI0B15774g predicted mRNA Length = 1827 Score = 50.1 bits (25), Expect = 0.031 Identities = 37/41 (90%) Strand = Plus / Plus Query: 360 gaccgggaggttggagatggaactacctctgttgttatcat 400 ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 421 gaccgagaggttggagatggaaccacctctgtcgtgatcat 461
>gb|AF322049.1| Naegleria gruberi chaperonin subunit alpha gene, partial cds Length = 1443 Score = 50.1 bits (25), Expect = 0.031 Identities = 55/65 (84%) Strand = Plus / Plus Query: 954 gctggtgctaatgttgtatttaccaccaagggaattgatgatatgtcattgaagtacttt 1013 ||||||||||| ||| | || || || ||||| ||||||||||||| ||||| |||||| Sbjct: 709 gctggtgctaacgttattttgacaacaaagggtattgatgatatgtgtttgaaatacttt 768 Query: 1014 gttga 1018 ||||| Sbjct: 769 gttga 773
>ref|XM_718720.1| Plasmodium yoelii yoelii str. 17XNL t-complex protein 1 subunit alpha (PY03629) partial mRNA Length = 1509 Score = 50.1 bits (25), Expect = 0.031 Identities = 46/53 (86%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagt 1036 ||||| ||||||||| |||| || || |||||||| ||||||||||| ||||| Sbjct: 742 ggaatagatgatatgccattaaaatattttgttgaagctggagcaatagcagt 794
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 50.1 bits (25), Expect = 0.031 Identities = 37/41 (90%) Strand = Plus / Plus Query: 360 gaccgggaggttggagatggaactacctctgttgttatcat 400 ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 2095771 gaccgagaggttggagatggaaccacctctgtcgtgatcat 2095811
>dbj|D90344.1|MUSTCP1A Mus musculus mRNA for t-complex polypeptide 1A (Tcp-1a), complete cds Length = 1812 Score = 50.1 bits (25), Expect = 0.031 Identities = 114/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 249 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 308 |||||||| ||||| ||||| || || || || || || |||||||| |||| | | ||| Sbjct: 188 gtggatgatattggtgatgtaaccattactaacgatggtgccaccatcctgaagttactg 247 Query: 309 gaggtcgagcatcccgcggcaaaggttctcgtg-gaattggctgagctccaagaccggga 367 ||||| || |||||||| || || ||||| ||| || |||||||| || |||||| || Sbjct: 248 gaggtagaacatcccgcagccaaagttct-gtgtgagttggctgacctgcaagacaaaga 306 Query: 368 ggttggagatggaactacctc 388 |||||||||||||||||||| Sbjct: 307 agttggagatggaactacctc 327
>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence Length = 131485 Score = 46.1 bits (23), Expect = 0.48 Identities = 32/35 (91%) Strand = Plus / Minus Query: 1197 attctagtgaaaggcacaaagaacacaagtgcggt 1231 ||||| |||||||||||||||||||| || ||||| Sbjct: 13911 attctggtgaaaggcacaaagaacaccagcgcggt 13877
>gb|AC146571.13| Medicago truncatula clone mth2-104a2, complete sequence Length = 140639 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Minus Query: 369 gttggagatggaactacctctgttgtt 395 ||||| ||||||||||||||||||||| Sbjct: 15729 gttggcgatggaactacctctgttgtt 15703
>gb|BC044673.1| Xenopus laevis similar to t-complex polypeptide 1, mRNA (cDNA clone MGC:53348 IMAGE:5571020), complete cds Length = 1868 Score = 46.1 bits (23), Expect = 0.48 Identities = 41/47 (87%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 415 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 300 gttggagatggcacaacatcagttgttatcattgctgcagagctgct 346
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1338 gttgctggtggtggtgctgtaga 1360 ||||||||||||||||||||||| Sbjct: 1253922 gttgctggtggtggtgctgtaga 1253944
>dbj|AB194475.1| Delia antiqua DaTCP-1 mRNA for T-complex protein 1, alpha subunit(TCP-1-alpha)(CCT-alpha), complete cds Length = 2113 Score = 46.1 bits (23), Expect = 0.48 Identities = 41/47 (87%) Strand = Plus / Plus Query: 1659 tttgccacagaagcagccattaccattgtgaggattgatgacatgat 1705 |||||||| ||||| |||||||||||| || | |||||||| ||||| Sbjct: 1653 tttgccaccgaagccgccattaccattttgcgtattgatgatatgat 1699
>ref|NM_074985.1| Caenorhabditis elegans SKN-1 Dependent Zygotic transcript family member (sdz-16) (sdz-16) mRNA, complete cds Length = 1035 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Minus Query: 888 gaactggagaagatccgtgagag 910 ||||||||||||||||||||||| Sbjct: 576 gaactggagaagatccgtgagag 554
>emb|Z92785.1|CEF31E9 Caenorhabditis elegans Cosmid F31E9, complete sequence Length = 16865 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 888 gaactggagaagatccgtgagag 910 ||||||||||||||||||||||| Sbjct: 12773 gaactggagaagatccgtgagag 12795
>gb|AF252801.1|AF252801 Drosophila simulans strain sim8 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252800.1|AF252800 Drosophila simulans strain sim7 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252799.1|AF252799 Drosophila simulans strain sim6 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252798.1|AF252798 Drosophila simulans strain sim5 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252797.1|AF252797 Drosophila simulans strain sim4 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252796.1|AF252796 Drosophila simulans strain sim3 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252795.1|AF252795 Drosophila simulans strain sim2 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AF252794.1|AF252794 Drosophila simulans strain sim1 t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 46.1 bits (23), Expect = 0.48 Identities = 47/55 (85%) Strand = Plus / Plus Query: 1657 agtttgccacagaagcagccattaccattgtgaggattgatgacatgatcaagct 1711 |||| ||||| || || |||||||||||| || | ||||| |||||||||||||| Sbjct: 1091 agttcgccacggaggccgccattaccattttgcgtattgacgacatgatcaagct 1145 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Minus Query: 369 gttggagatggaactacctctgttgtt 395 ||||| ||||||||||||||||||||| Sbjct: 104988 gttggcgatggaactacctctgttgtt 104962
>gb|AF143495.1|AF143495 Xenopus laevis t-complex polypeptide 1 (TCP1) pseudogene, mRNA sequence Length = 1855 Score = 46.1 bits (23), Expect = 0.48 Identities = 41/47 (87%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttatcatcgctgcagagttgct 415 ||||||||||| || || || ||||||||||| ||||||||| |||| Sbjct: 301 gttggagatggcacaacatcagttgttatcattgctgcagagctgct 347
>emb|CT030165.7| M.truncatula DNA sequence from clone MTH2-150K22 on chromosome 3, complete sequence Length = 134390 Score = 46.1 bits (23), Expect = 0.48 Identities = 26/27 (96%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgtt 395 ||||| ||||||||||||||||||||| Sbjct: 24892 gttggcgatggaactacctctgttgtt 24918
>dbj|AB001085.1| Sulfolobus sp. DNA for chaperonin alpha subunit, complete cds Length = 1950 Score = 46.1 bits (23), Expect = 0.48 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1338 gttgctggtggtggtgctgtaga 1360 ||||||||||||||||||||||| Sbjct: 1363 gttgctggtggtggtgctgtaga 1385
>emb|CT837212.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115P11, full insert sequence Length = 1653 Score = 44.1 bits (22), Expect = 1.9 Identities = 28/30 (93%) Strand = Plus / Plus Query: 366 gaggttggagatggaactacctctgttgtt 395 |||| ||| ||||||||||||||||||||| Sbjct: 299 gaggctggtgatggaactacctctgttgtt 328
>ref|XM_392660.3| PREDICTED: Apis mellifera similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha), transcript variant 1 (LOC409134), mRNA Length = 1968 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1659 tttgccacagaagcagccattaccattgtgaggattgatgacatgatcaa 1708 ||||||||||||||||| || || ||| | || |||||||| |||||||| Sbjct: 1679 tttgccacagaagcagcaataacaattcttagaattgatgatatgatcaa 1728
>ref|XM_001069861.1| PREDICTED: Rattus norvegicus similar to potassium channel modulatory factor 1 (LOC684322), mRNA Length = 3391 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 ctccagtcccactgccccttcc 87 |||||||||||||||||||||| Sbjct: 2422 ctccagtcccactgccccttcc 2401
>ref|NM_001040768.1| Encephalitozoon cuniculi GB-M1 T COMPLEX PROTEIN 1 DELTA SUBUNIT (ECU02_0520) partial mRNA Length = 1455 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 279 aatgacggagccaccattctga 300 |||||||||||||||||||||| Sbjct: 139 aatgacggagccaccattctga 160
>ref|XM_641715.1| Dictyostelium discoideum AX4 hypothetical protein (tcp) mRNA, complete cds Length = 1647 Score = 44.1 bits (22), Expect = 1.9 Identities = 58/70 (82%) Strand = Plus / Plus Query: 955 ctggtgctaatgttgtatttaccaccaagggaattgatgatatgtcattgaagtactttg 1014 ||||||| ||||||||| | |||||||| || || |||||| | | ||||| ||||||| Sbjct: 845 ctggtgcaaatgttgtactcaccaccaaaggtatcgatgatttatgtttgaaatactttg 904 Query: 1015 ttgaggctgg 1024 |||| ||||| Sbjct: 905 ttgaagctgg 914
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1761 tccctggttgctgtttgttatg 1782 |||||||||||||||||||||| Sbjct: 1859629 tccctggttgctgtttgttatg 1859650
>ref|NM_001038086.1| Bos taurus similar to T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha) (MGC133746), mRNA gb|BC109781.1| Bos taurus similar to T-complex protein 1, alpha subunit (TCP-1-alpha) (CCT-alpha), mRNA (cDNA clone MGC:133746 IMAGE:8068669), complete cds Length = 1893 Score = 44.1 bits (22), Expect = 1.9 Identities = 61/74 (82%) Strand = Plus / Plus Query: 249 gtggatgacattggcgatgtcacgatcacgaatgacggagccaccattctgaggatgctg 308 |||||||||||||| ||||| || || || ||||| || || ||||| |||| | | ||| Sbjct: 246 gtggatgacattggtgatgtaaccattactaatgatggtgcaaccatcctgaagctactg 305 Query: 309 gaggtcgagcatcc 322 ||||| |||||||| Sbjct: 306 gaggtagagcatcc 319
>ref|NM_063321.2| Caenorhabditis elegans Chaperonin Containing TCP-1 family member (cct-1) (cct-1) mRNA, complete cds Length = 1873 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Plus Query: 352 agctccaagaccgggaggttggagatggaactacctctgttgttat 397 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 258 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 303
>gb|AC117387.2| Homo sapiens 3 BAC RP11-16M17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 63930 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1820 tgattttccttttcttcctctt 1841 |||||||||||||||||||||| Sbjct: 56003 tgattttccttttcttcctctt 56024
>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence Length = 131548 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1243 tcagaggagcaaatgacttcat 1264 |||||||||||||||||||||| Sbjct: 35048 tcagaggagcaaatgacttcat 35069
>emb|Z82210.2|HS431C21 Human DNA sequence from clone RP3-431C21 on chromosome Xq21 Contains a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 118426 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1130 atttgatccttcctttcttgga 1151 |||||||||||||||||||||| Sbjct: 38104 atttgatccttcctttcttgga 38125
>emb|AL356584.21| Human DNA sequence from clone RP11-60C15 on chromosome 9 Contains part of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD), complete sequence Length = 165589 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1823 ttttccttttcttcctctttgt 1844 |||||||||||||||||||||| Sbjct: 50593 ttttccttttcttcctctttgt 50614
>gb|AF442545.1|AF442545 Physarum polycephalum CCT chaperonin alpha subunit mRNA, complete cds Length = 1677 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 345 ttggctgagctccaagaccgggaggttggagatggaactacctctgttgt 394 |||||||| || ||||| | ||||||||| ||||| || ||||||||||| Sbjct: 277 ttggctgaccttcaagatcaggaggttggggatggcacaacctctgttgt 326
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 210 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 259 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 533176 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 533225
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 44.1 bits (22), Expect = 1.9 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 ccgccgccgccatggcgatcaccgcc 119 ||||||||||||||| |||||||||| Sbjct: 126782 ccgccgccgccatggtgatcaccgcc 126807
>gb|AF210627.1|AF210627 Eremothecium gossypii Gcd6 (YDR211w) gene, partial cds; Cdc42 (CDC42) gene, complete cds; and Tcp1 (YDR212w) gene, partial cds Length = 2202 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 210 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 259 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 1972 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 2021
>gb|AF226714.1|AF226714 Trichomonas vaginalis chaperonin subunit alpha1 CCTalpha (Ccta1) gene, complete cds Length = 2735 Score = 44.1 bits (22), Expect = 1.9 Identities = 58/70 (82%) Strand = Plus / Plus Query: 229 tcgggctcgacaagatgctcgtggatgacattggcgatgtcacgatcacgaatgacggag 288 |||| |||||||||||||| || ||||| ||||| || ||||| ||||| || || || | Sbjct: 221 tcggtctcgacaagatgcttgtcgatgatattggtgaagtcacaatcacaaacgatggtg 280 Query: 289 ccaccattct 298 | |||||||| Sbjct: 281 ctaccattct 290
>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence Length = 162101 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1243 tcagaggagcaaatgacttcat 1264 |||||||||||||||||||||| Sbjct: 96502 tcagaggagcaaatgacttcat 96481
>ref|NM_211636.1| Eremothecium gossypii AGL092Wp (AGL092W), mRNA Length = 1677 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 210 aagtcctcgctcggccccgtcgggctcgacaagatgctcgtggatgacat 259 ||||| ||||| ||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 121 aagtcgtcgctgggcccggtggggctggacaagatgctggtggacgacat 170
>dbj|AK112372.1| Ciona intestinalis cDNA, clone:ciad040j01, full insert sequence Length = 2020 Score = 44.1 bits (22), Expect = 1.9 Identities = 43/50 (86%) Strand = Plus / Plus Query: 825 gatttcaaccttcagaagacgaaaatgcaaatgggtgttcaagtccttgt 874 |||||||| ||||||||||| |||||| | ||||| ||||| ||||||| Sbjct: 759 gatttcaatcttcagaagaccaaaatgaagatgggagttcacatccttgt 808
>gb|AC147645.3| Gallus gallus BAC clone CH261-121C23 from chromosome unknown, complete sequence Length = 158903 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1823 ttttccttttcttcctctttgt 1844 |||||||||||||||||||||| Sbjct: 26510 ttttccttttcttcctctttgt 26531
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Minus Query: 279 aatgacggagccaccattctga 300 |||||||||||||||||||||| Sbjct: 62494 aatgacggagccaccattctga 62473
>emb|Z66500.1|CET05C12 Caenorhabditis elegans Cosmid T05C12, complete sequence Length = 33780 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Plus Query: 352 agctccaagaccgggaggttggagatggaactacctctgttgttat 397 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 17586 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 17631
>gb|U07941.1|CEU07941 Caenorhabditis elegans chaperonin subunit 1 (cct-1) gene, complete cds Length = 3047 Score = 44.1 bits (22), Expect = 1.9 Identities = 40/46 (86%) Strand = Plus / Plus Query: 352 agctccaagaccgggaggttggagatggaactacctctgttgttat 397 |||| |||||| |||||| |||||||||||||| ||||| ||||| Sbjct: 761 agctgcaagacgaggaggtcggagatggaactacttctgtcgttat 806
>gb|AC125793.2| Homo sapiens chromosome 16 clone CTD-3253I12, complete sequence Length = 117647 Score = 44.1 bits (22), Expect = 1.9 Identities = 22/22 (100%) Strand = Plus / Plus Query: 503 gtatgtggaggaaaagctgtct 524 |||||||||||||||||||||| Sbjct: 84040 gtatgtggaggaaaagctgtct 84061
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 ggcgagcgccagtccggccag 158 ||||||||||||||||||||| Sbjct: 2694065 ggcgagcgccagtccggccag 2694085
>emb|CT835693.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN028D10, full insert sequence Length = 1158 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 ccccttccccacccccgccgccgcc 104 |||||||||| |||||||||||||| Sbjct: 263 ccccttcccctcccccgccgccgcc 239
>dbj|AK243523.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100075L24, full insert sequence Length = 2334 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 ccccttccccacccccgccgccgcc 104 |||||||||| |||||||||||||| Sbjct: 236 ccccttcccctcccccgccgccgcc 212
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 91 cccccgccgccgccatggcgatcaccgcc 119 |||||||||||||||| |||| ||||||| Sbjct: 1844604 cccccgccgccgccattgcgaccaccgcc 1844576
>ref|NM_001073956.1| Oryza sativa (japonica cultivar-group) Os11g0195500 (Os11g0195500) mRNA, complete cds Length = 1980 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 ccccttccccacccccgccgccgcc 104 |||||||||| |||||||||||||| Sbjct: 181 ccccttcccctcccccgccgccgcc 157
>ref|XR_021774.1| PREDICTED: Pan troglodytes similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC743586), mRNA Length = 1873 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 993 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1033
>ref|XR_022906.1| PREDICTED: Pan troglodytes similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (65 kDa antigen) (LOC463368), mRNA Length = 1527 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 501 gttggagatggaactacctccgtggttat 529 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1116 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1156
>ref|XM_001149528.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 9 (TCP1), mRNA Length = 2338 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1745 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1785
>ref|XM_001149669.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 10 (TCP1), mRNA Length = 3490 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1745 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1785
>ref|XM_001148676.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 2 (TCP1), mRNA Length = 2346 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 966 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1006
>ref|XM_001148959.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 5 (TCP1), mRNA Length = 2504 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1124 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1164
>ref|XM_001148808.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 3 (TCP1), mRNA Length = 2249 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 869 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 909
>ref|XM_001148889.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 4 (TCP1), mRNA Length = 2512 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1132 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1172
>ref|XM_001149033.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 6 (TCP1), mRNA Length = 2675 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1295 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1335
>ref|XM_001148331.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 1 (TCP1), mRNA Length = 2542 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1162 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1202
>ref|XM_001149107.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 7 (TCP1), mRNA Length = 3140 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1760 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1800
>ref|XM_001149739.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 11 (TCP1), mRNA Length = 3125 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1745 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1785
>ref|XM_001149185.1| PREDICTED: Pan troglodytes T-complex protein 1, transcript variant 8 (TCP1), mRNA Length = 2396 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1016 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1056
>gb|DQ893771.1| Homo sapiens clone FLH165074.01L; RZPDo839F09157D TCP1 mRNA, partial sequence Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|DQ890600.1| Synthetic construct Homo sapiens clone FLH165078.01X; RZPDo839F09158D TCP1 mRNA, complete sequence Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>ref|XR_018072.1| PREDICTED: Homo sapiens similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC401329), mRNA Length = 1669 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 255 gttggagatggaactacctccgtggttat 283 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 870 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 910
>ref|XR_018738.1| PREDICTED: Homo sapiens similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC647047), mRNA Length = 1669 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 255 gttggagatggaactacctccgtggttat 283 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 870 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 910
>ref|XR_016961.1| PREDICTED: Homo sapiens similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC647047), mRNA Length = 1669 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 255 gttggagatggaactacctccgtggttat 283 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 870 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 910
>ref|XM_001097437.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 3 (TCP1), mRNA Length = 2352 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1008 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1048
>ref|XM_001097333.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 2 (TCP1), mRNA Length = 2210 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 866 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 906
>ref|XM_001097116.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 1 (TCP1), mRNA Length = 1811 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 467 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 507
>ref|XM_001097535.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 4 (TCP1), mRNA Length = 2499 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1155 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1195
>ref|XM_001097631.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 5 (TCP1), mRNA Length = 2885 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1541 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1581
>ref|XM_001098115.1| PREDICTED: Macaca mulatta T-complex protein 1, transcript variant 6 (TCP1), mRNA Length = 2370 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1026 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1066
>ref|XR_011961.1| PREDICTED: Macaca mulatta similar to T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha) (LOC708984), mRNA Length = 1562 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 395 gttggagatggaactacctcagtggttat 423
>ref|XR_011863.1| PREDICTED: Macaca mulatta T-complex protein 1 (TCP1), mRNA Length = 2003 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1093 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1133
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 ggcgagcgccagtccggccag 158 ||||||||||||||||||||| Sbjct: 2572923 ggcgagcgccagtccggccag 2572903
>emb|CT033761.14| Mouse DNA sequence from clone RP23-203P12 on chromosome 9, complete sequence Length = 208050 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1822 attttccttttcttcctcttt 1842 ||||||||||||||||||||| Sbjct: 197420 attttccttttcttcctcttt 197400
>ref|NM_030752.2| Homo sapiens t-complex 1 (TCP1), transcript variant 1, mRNA Length = 2463 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1106 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1146
>ref|NM_001008897.1| Homo sapiens t-complex 1 (TCP1), transcript variant 2, mRNA Length = 2377 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1020 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1060
>gb|AY973259.1| Leishmania major chaperonin subunit alpha mRNA, complete cds Length = 1641 Score = 42.1 bits (21), Expect = 7.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 205 tcgtcaagtcctcgctcggccccgtcgggctcgacaagatgctcgtgga 253 |||| ||||| ||||| |||||| |||| || ||||||||||| ||||| Sbjct: 104 tcgttaagtcgtcgctgggccccatcggtctggacaagatgctggtgga 152
>ref|XM_640901.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0190286) mRNA, complete cds Length = 927 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1336 tagttgctggtggtggtgctg 1356 ||||||||||||||||||||| Sbjct: 638 tagttgctggtggtggtgctg 658
>gb|AY549305.1| Dicentrarchus labrax glucocorticoid receptor mRNA, complete cds Length = 2457 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1338 gttgctggtggtggtgctgtagaag 1362 |||||||||| |||||||||||||| Sbjct: 868 gttgctggtgctggtgctgtagaag 844
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ccccttccccacccccgccgccgcc 104 |||||||||| |||||||||||||| Sbjct: 75857 ccccttcccctcccccgccgccgcc 75881
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1472 tgttaatgccgcaaaagatgc 1492 ||||||||||||||||||||| Sbjct: 463944 tgttaatgccgcaaaagatgc 463924
>gb|AY618171.1| Sterkiella histriomuscorum clone UGC1O0006_P24_F genomic sequence Length = 670 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 420 agagccaatgatcttgtgaggaataagattcacccgacctc 460 ||||| ||||||||||| | ||| ||||||||||| ||||| Sbjct: 431 agagcaaatgatcttgttaagaacaagattcaccctacctc 471
>gb|AY617573.1| Sterkiella histriomuscorum clone UGC1O0003_F19_R genomic sequence Length = 479 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 420 agagccaatgatcttgtgaggaataagattcacccgacctc 460 ||||| ||||||||||| | ||| ||||||||||| ||||| Sbjct: 431 agagcaaatgatcttgttaagaacaagattcaccctacctc 471
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 ccccttccccacccccgccgccgcc 104 ||||||||||||||||||| ||||| Sbjct: 66944 ccccttccccacccccgcccccgcc 66920
>gb|AC167222.4| Mus musculus 10 BAC RP23-261G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198762 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1824 tttccttttcttcctctttgt 1844 ||||||||||||||||||||| Sbjct: 73217 tttccttttcttcctctttgt 73197
>ref|XM_850736.1| PREDICTED: Canis familiaris similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon), transcript variant 2 (LOC606873), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 acgaatgacggagccaccattctgaggatgctggaggtcga 316 ||||||||||| ||||||||||| || ||| |||| ||||| Sbjct: 239 acgaatgacggtgccaccattctaagcatgatggacgtcga 279
>ref|XM_843210.1| PREDICTED: Canis familiaris similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon), transcript variant 1 (LOC606873), mRNA Length = 1925 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 276 acgaatgacggagccaccattctgaggatgctggaggtcga 316 ||||||||||| ||||||||||| || ||| |||| ||||| Sbjct: 239 acgaatgacggtgccaccattctaagcatgatggacgtcga 279
>gb|AY495629.1| Gibberella zeae polyketide synthase (PKS4) gene, partial cds Length = 1436 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1551 aagcagcacttatcaagcatg 1571 ||||||||||||||||||||| Sbjct: 935 aagcagcacttatcaagcatg 955
>gb|AC110822.6| Mus musculus BAC clone RP24-226H7 from chromosome 9, complete sequence Length = 144131 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1822 attttccttttcttcctcttt 1842 ||||||||||||||||||||| Sbjct: 143508 attttccttttcttcctcttt 143488
>gb|AC027269.5| Homo sapiens BAC clone RP11-100C21 from 7, complete sequence Length = 159698 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 5434 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 5394 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 gttggagatggaactacctctgttgttat 397 |||||||||||||||||||| || ||||| Sbjct: 6049 gttggagatggaactacctccgtggttat 6021
>ref|XM_382572.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02396.1) partial mRNA Length = 7827 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1551 aagcagcacttatcaagcatg 1571 ||||||||||||||||||||| Sbjct: 875 aagcagcacttatcaagcatg 895
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 379537 tgcctgcagctttattacggc 379557
>gb|BT007686.1| Synthetic construct Homo sapiens t-complex 1 mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|BT006969.1| Homo sapiens t-complex 1 mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 410453 tgcctgcagctttattacggc 410473
>ref|XM_626296.1| Cryptosporidium parvum Iowa II t-complex protein 1, alpha subunit (cgd2_600), partial mRNA Length = 1704 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1069 ttgccaaggcaacaggtgcgacaat 1093 |||||||||||||||| |||||||| Sbjct: 971 ttgccaaggcaacaggagcgacaat 995
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 328443 tgcctgcagctttattacggc 328463
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 386532 tgcctgcagctttattacggc 386552
>dbj|AB169581.1| Macaca fascicularis brain cDNA, clone: QnpA-12515, similar to human t-complex 1 (TCP1), mRNA, RefSeq: NM_030752.1 Length = 2364 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1005 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1045
>dbj|AK082404.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230047K01 product:unclassifiable, full insert sequence Length = 1340 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 ccccttccccacccccgccgccgcc 104 ||||||||||||||||||| ||||| Sbjct: 1276 ccccttccccacccccgcccccgcc 1300
>gb|AF322043.1| Trypanosoma brucei chaperonin subunit alpha gene, partial cds Length = 1465 Score = 42.1 bits (21), Expect = 7.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 387 tctgttgttatcatcgctgcagagttgctcaag 419 |||||||||||| |||| || |||||||||||| Sbjct: 142 tctgttgttatcctcgccgccgagttgctcaag 174
>emb|CR678989.2|CNS0FMUX Tetraodon nigroviridis full-length cDNA Length = 706 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 agtccggccaggacgtccgca 168 ||||||||||||||||||||| Sbjct: 263 agtccggccaggacgtccgca 283
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 ccccttccccacccccgccgccgcc 104 |||||||||| |||||||||||||| Sbjct: 4755817 ccccttcccctcccccgccgccgcc 4755793
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tccccacccccgccgccgcca 105 ||||||||||||||||||||| Sbjct: 9949133 tccccacccccgccgccgcca 9949153
>emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chromosome 6 Contains a novel gene, the SOD2 gene for superoxide dismutase 2, mitochondrial, a pseudogene similar to heterogenous nuclear ribonucleoprotein H, the gene for Wilms' tumor 1-associating protein (KIAA0105) (WTAP), the ACAT2 gene for acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase), the TCP1 gene for t-complex 1 (CCT1, Ccta, D6S230E), the 5' end of the MRPL18 gene for mitochondrial ribosomal protein L18, and 4 CpG islands, complete sequence Length = 165802 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 152720 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 152680
>gb|AC159135.11| Mus musculus 10 BAC RP23-184H24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207228 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1824 tttccttttcttcctctttgt 1844 ||||||||||||||||||||| Sbjct: 198465 tttccttttcttcctctttgt 198485
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 950 caaggctggtgctaatgttgt 970 ||||||||||||||||||||| Sbjct: 89586 caaggctggtgctaatgttgt 89606
>emb|X52882.1|HSTCP1 Homo sapiens mRNA for t-complex polypeptide 1 (TCP1 gene) Length = 2019 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 892 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 932
>gb|DQ149577.1| Paracoccus pantotrophus transposon TnPpa1, complete sequence Length = 44286 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 ccgccgccgccatggcgatca 114 ||||||||||||||||||||| Sbjct: 21064 ccgccgccgccatggcgatca 21044
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1659 tttgccacagaagcagccatt 1679 ||||||||||||||||||||| Sbjct: 135102 tttgccacagaagcagccatt 135082
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 358169 tgcctgcagctttattacggc 358189
>gb|AC157823.2| Mus musculus BAC clone RP23-382L21 from chromosome 12, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 7.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 909 agggaatctgacataacaaaggagcgaat 937 |||||||||||||||||| |||| ||||| Sbjct: 66010 agggaatctgacataacacaggaacgaat 66038
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 359524 tgcctgcagctttattacggc 359544
>gb|AC074316.7| Staphylococcus aureus clone sabac-1, complete sequence Length = 56268 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 47222 tgcctgcagctttattacggc 47202
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 379580 tgcctgcagctttattacggc 379600
>emb|CR624087.1| full-length cDNA clone CS0DM007YN14 of Fetal liver of Homo sapiens (human) Length = 1865 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR622372.1| full-length cDNA clone CS0DE005YN05 of Placenta of Homo sapiens (human) Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 975 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1015
>emb|CR619708.1| full-length cDNA clone CS0DM008YF16 of Fetal liver of Homo sapiens (human) Length = 1879 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR609567.1| full-length cDNA clone CS0DA001YB20 of Neuroblastoma of Homo sapiens (human) Length = 1887 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR617240.1| full-length cDNA clone CS0DF015YF13 of Fetal brain of Homo sapiens (human) Length = 1771 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 913 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 953
>emb|CR615945.1| full-length cDNA clone CS0DI068YA09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1916 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1054 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1094
>emb|CR613792.1| full-length cDNA clone CS0DA009YM15 of Neuroblastoma of Homo sapiens (human) Length = 1934 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1054 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1094
>emb|CR606609.1| full-length cDNA clone CS0DG007YK04 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1849 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 986 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1026
>emb|CR608240.1| full-length cDNA clone CS0DJ010YC20 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1877 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 999 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1039
>emb|CR603769.1| full-length cDNA clone CS0DH001YN13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1403 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 522 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 562
>emb|CR596767.1| full-length cDNA clone CS0DI042YC05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1917 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1056 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1096
>emb|CR590270.1| full-length cDNA clone CS0DN005YK21 of Adult brain of Homo sapiens (human) Length = 1923 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1062 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1102
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 ccgacatcatgggcgagcgcc 147 ||||||||||||||||||||| Sbjct: 3423972 ccgacatcatgggcgagcgcc 3423992
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tccccacccccgccgccgcca 105 ||||||||||||||||||||| Sbjct: 130095 tccccacccccgccgccgcca 130115
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 tccccacccccgccgccgcca 105 ||||||||||||||||||||| Sbjct: 23826 tccccacccccgccgccgcca 23846
>ref|XM_950813.1| Neurospora crassa OR74A hypothetical protein (NCU04448.1) partial mRNA Length = 1677 Score = 42.1 bits (21), Expect = 7.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 220 tcggccccgtcgggctcgacaagatgctcgtggatgacattggcgatgt 268 |||||||| ||| |||||||||||| | || ||||||||||| ||||| Sbjct: 107 tcggccccagcggtctcgacaagatgatggtcgatgacattggtgatgt 155
>gb|AF255324.1|AF255324 Drosophila simulans t-complex polypeptide 1 (T-cp1) gene, partial cds Length = 1201 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1003 tgaagtactttgttgaggctggagc 1027 |||||||||| |||||||||||||| Sbjct: 374 tgaagtacttcgttgaggctggagc 398
>gb|AY891879.1| Synthetic construct Homo sapiens clone FLH015483.01L t-complex 1 (TCP1) mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY891878.1| Synthetic construct Homo sapiens clone FLH015482.01L t-complex 1 (TCP1) mRNA, partial cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY889392.1| Synthetic construct Homo sapiens clone FLH015487.01X t-complex 1 (TCP1) mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>gb|AY889391.1| Synthetic construct Homo sapiens clone FLH015486.01X t-complex 1 (TCP1) mRNA, complete cds Length = 1671 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 871 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 911
>emb|AJ539054.1|NTA539054 Nicotiana tabacum cDNA-AFLP-fragment BT4-M34-027 Length = 149 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1822 attttccttttcttcctcttt 1842 ||||||||||||||||||||| Sbjct: 115 attttccttttcttcctcttt 95
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 375650 tgcctgcagctttattacggc 375670
>ref|XM_670282.1| Plasmodium berghei strain ANKA t-complex protein 1, alpha subunit (PB001037.03.0) partial mRNA Length = 1632 Score = 42.1 bits (21), Expect = 7.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctggagcaattgcagt 1036 ||||| ||||||||| |||| || || ||||| || ||||||||||| ||||| Sbjct: 865 ggaatagatgatatgccattaaaatattttgtcgaagctggagcaatagcagt 917
>gb|AC133947.3| Mus musculus BAC clone RP24-189I2 from 9, complete sequence Length = 168997 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1822 attttccttttcttcctcttt 1842 ||||||||||||||||||||| Sbjct: 24764 attttccttttcttcctcttt 24744
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1945 tgcctgcagctttattacggc 1965 ||||||||||||||||||||| Sbjct: 333846 tgcctgcagctttattacggc 333866
>gb|DQ019316.1| Gibberella zeae aldehyde dehydrogenase (ALD), heterokaryon incompatibility protein (HET), non-ribosomal peptide synthetase (NPS), monocarboxylate transporter like-protein (MCT), and K+ channel protein (KAT) genes, complete cds; PKS gene cluster, complete sequence; and polyketide synthase (PKS13), bZIP domain-containing transcription factor (ZEB2), protein kinase Eg2-like protein (STK), and Ca2+ ATPase (ACA) genes, complete cds Length = 49993 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1551 aagcagcacttatcaagcatg 1571 ||||||||||||||||||||| Sbjct: 28540 aagcagcacttatcaagcatg 28560
>emb|AL627312.12| Mouse DNA sequence from clone RP23-276H1 on chromosome 11, complete sequence Length = 178178 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1112 catggagggtgaagaaacatt 1132 ||||||||||||||||||||| Sbjct: 48491 catggagggtgaagaaacatt 48471
>gb|BC000665.1| Homo sapiens t-complex 1, mRNA (cDNA clone MGC:2234 IMAGE:3349237), complete cds Length = 1919 Score = 42.1 bits (21), Expect = 7.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 984 ggaattgatgatatgtcattgaagtactttgttgaggctgg 1024 |||||||||||||||| ||||||| ||||| |||||||| Sbjct: 996 ggaattgatgatatgtgtctgaagtattttgtggaggctgg 1036
>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete sequence Length = 165747 Score = 42.1 bits (21), Expect = 7.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 880 atccaagggaactggagaaga 900 ||||||||||||||||||||| Sbjct: 141363 atccaagggaactggagaaga 141383
>emb|AL627386.8| Mouse DNA sequence from clone RP23-278A10 on chromosome X, complete sequence Length = 93010 Score = 42.1 bits (21), Expect = 7.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1332 acggtagttgctggtggtggtgctg 1356 |||||||||| |||||||||||||| Sbjct: 39271 acggtagttggtggtggtggtgctg 39295 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 363,438,927 Number of extensions: 20150160 Number of successful extensions: 416632 Number of sequences better than 10.0: 202 Number of HSP's gapped: 416618 Number of HSP's successfully gapped: 331 Length of query: 1981 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1958 Effective length of database: 18,503,978,556 Effective search space: 36230790012648 Effective search space used: 36230790012648 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
