ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf26g16 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os07g16750:12007.t01535:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5395 Score = 458 bits (995), Expect = e-128 Identities = 188/282 (66%), Positives = 232/282 (82%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q KYA DL+ K G++ CK TPL+ TEKL +G P+ + D+T+YR +VG LQYLTL Sbjct: 3523 LNQAKYALDLLTKVGMKDCKSASTPLAVTEKLMAHKGNPLGTEDSTRYRSIVGGLQYLTL 3702 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD++FAVNKVC +LHAPT+ H +A KRI+RY+ T+++GL+F +S STLVSAFS++DW Sbjct: 3703 TRPDLAFAVNKVCQYLHAPTSEHLSAVKRILRYINGTVDVGLHFKRSSSTLVSAFSDADW 3882 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGF I+FGPN++SWSARKQ TVSRSS EA YKA+ANATAE+IWVQS+L+E Sbjct: 3883 AGSLDDRRSTGGFVIYFGPNIVSWSARKQPTVSRSSTEAEYKAMANATAELIWVQSVLEE 4062 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LG+K +++P WCDN+GATYLS+N VFHARTKHIEID+HFV ERVANK+ DIRFI SKDQ Sbjct: 4063 LGVKIAQSPMLWCDNLGATYLSSNPVFHARTKHIEIDYHFVRERVANKMFDIRFIGSKDQ 4242 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKGVKQAGSVRVVT 797 +ADGFTKAL QS F +NLNL KL*LR VKQ S +V+ Sbjct: 4243 IADGFTKALSIQSLRHFMYNLNLSKL*LRGSVKQCTSYLLVS 4368 Score = 278 bits (601), Expect = 9e-74 Identities = 150/272 (55%), Positives = 169/272 (62%) Frame = +3 / -3 Query: 822 CLTPFLNHNFIXXXXXXXXXXXXVRKAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSIS 1001 C T LNHN + +AFVNPSA *SF+ IN +S LFATLS TK* SIS Sbjct: 4343 CFTLPLNHNLDKLRLYMKCLKLCIDRAFVNPSAI*SFDPINLISNILFATLSLTK**SIS 4164 Query: 1002 MCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLD 1181 MCFV A*KT DKYVAP LSH G +F PNS D T + SAVA A ALY AS+LD Sbjct: 4163 MCFVRA*KTGFEDKYVAPKLSHHNIGD*AIFTPNSSRTD*TQINSAVALAIALYSASVLD 3984 Query: 1182 LETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCF 1361 L+TV CFLA H+ LGPK I PPV+ LSSR PAQS EKALT VE DLLK RP +V Sbjct: 3983 LDTVGCFLALHDTILGPK*ITKPPVDLLSSRLPAQSASEKALTRVELDLLKCRPTSTVPL 3804 Query: 1362 TYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSM 1541 YL+IR A K + VGA + *HTL TA SGLVSVKY PT LY V+S+ G P Sbjct: 3803 IYLSIRFTADKCSEVGA*RY*HTLLTANAKSGLVSVKYCSPPTILLYRVLSSVPRGFPLC 3624 Query: 1542 RDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 +FSV GV LQ P +KS AYF+* Sbjct: 3623 AINFSVTASGVEADLQSFIPTLVSKSKAYFA* 3528 Score = 169 bits (364), Expect = 4e-41 Identities = 94/272 (34%), Positives = 149/272 (54%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 S K+C RL +W RL H+ R+ R + + G Y +Q R +++ +T++ Sbjct: 3528 SSKVCLRLAN*SWYERLQISFHAASCDREVDGTQRKSSWY*GQYSVQEYCRRTTILNTHQ 3707 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T + +CC G+ + +C+ + C+ Y++I + WS +V FY+ +C F* LG Sbjct: 3708 TGFGVCC**GMSISSCSYFRTFVGCKTYTQIYQWNC*CWSAL*EV*FYSSQCLF*C*LGW 3887 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVG 1098 R*Q R CN+ WT* M C*+T++ +*+R R+ +C+ * ++G++ + + Sbjct: 3888 *SR*QKVYRRFCNLLWT*YCVMEC*ETTNSI*V*YRSRI*SYGQCYC*VNLGSVSS*RIR 4067 Query: 1097 YKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC 918 K + +V*Q +I V +S LSC NKAH*D SFC R+S K* + + VY KRS+ Sbjct: 4068 SKDCSIAYVMV*QFRGNIFVLKSGLSCTNKAH*D*LSFCKRKSSK*DV*Y*VYWIKRSNS 4247 Query: 917 *WVYKSFTYTKF*RLQT*SQLDKVVIKEGC*T 822 W+YK YT+F *S L +V+I+ C T Sbjct: 4248 RWIYKGSVYTEFKTFHV*S*LVQVMIEGECKT 4343 Score = 168 bits (361), Expect = 1e-40 Identities = 110/258 (42%), Positives = 136/258 (52%) Frame = +2 / -2 Query: 812 RTSLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMK 991 R +LF T P S L QV+I+ E+ TL S CK I LIF* NKPN++ IC S S+KM Sbjct: 4353 RCTLFYTPPQS*LGQVKIIHEMS*TLYRQSLCKSIGYLIF*SNKPNIKHLICYSFSYKMI 4174 Query: 992 IYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCL 1171 I LNVLCS MKD I Q+C IVTP L Y+ + L+P S I + C Sbjct: 4173 INLNVLCSCMKDRI*GQICCP*IVTP*HRRLSNLYS*FFKN*LNPN*LSSSIGHSFIFCF 3994 Query: 1172 DARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQ 1351 R LF S P*+ IRSK K +C SVI* + P+ IRK T R ++ TNI Sbjct: 3993 GTRPRYCWLFPSTP*HNIRSKVNYKTSCRPSVI*TTSPISIRKGTD*SRTRPLKVQTNIN 3814 Query: 1352 RMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRC 1531 IS YT S ++ M LT+L+ SK IRS +C +L S+Y T V S+V R Sbjct: 3813 SSIDISEYTFYSRQMF*SRSMKILTYLINSKRQIRSGEC*VL*SSYNTPVPSTVLSTKRI 3634 Query: 1532 SFHER*FFCTR*RSGCGF 1585 SF C *R G F Sbjct: 3633 SFVCHQLLCHS*RRGS*F 3580 Score = 90.9 bits (192), Expect = 2e-17 Identities = 67/163 (41%), Positives = 86/163 (52%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V FL+ G *MT+ Q L + LDLI HG+L N + L +Q + M L + Sbjct: 3860 VPFLMLIGLVV*MTEGLQEVL*FTLDLILCHGVLGNNQQYLGLVPKQNIKLWPMLLLS*F 4039 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G + ++ *+ L GVT+ H C I SFM EQSTLR I IL E+E QI Sbjct: 4040 GFSQFLKN*E*RLLNRLCYGVTI*GQHICPQIRSFMHEQSTLRLIIIL*EKE*QIRCLIL 4219 Query: 945 GLFIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVLNKL 817 GL QKIK M LQ+L +++V S II T S D*G V N + Sbjct: 4220 GLLDQKIK*PMDLQRLCLYRV*DISCIILTCPSYD*GGV*NSV 4348 Score = 75.3 bits (158), Expect(2) = 8e-16 Identities = 40/80 (50%), Positives = 50/80 (62%) Frame = +1 / -1 Query: 829 HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCA 1008 H I T +S*DY *++ N V + L* H+ DLL +*T YL L L QN+N SQCA Sbjct: 4336 HSPSIITWTS*DYT*NVLNSV*TEPL*IHRLFDLLIQ*T*YQTSYLLLFLLQNDNQSQCA 4157 Query: 1009 LF*HERLDWQTSMWLQHCHT 1068 LF HER D +T+M +CHT Sbjct: 4156 LFVHERPDLRTNMLPLNCHT 4097 Score = 35.9 bits (72), Expect(2) = 8e-16 Identities = 35/107 (32%), Positives = 48/107 (44%) Frame = +1 / -1 Query: 1195 LVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILL 1374 +V * +M *VQ LQ L CHL P+ + K+H * T *+ DQ+ + +I + Sbjct: 3970 VVS*HSMTQY*VQSKLQNLL*TFCHLDYQPNQHQKRH*LE*N*TS*SADQHQQFH*YI*V 3791 Query: 1375 YAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CP 1515 Y Q + L H + P QQ V *V + L C CP Sbjct: 3790 YVLQPTNVLK*EHEDIDIPY*QQTPNPVW*VLSIVVLLQYSCTEYCP 3650
>LOC_Os08g43110:12008.t04038:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4524 Score = 448 bits (973), Expect = e-125 Identities = 182/268 (67%), Positives = 225/268 (83%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K+ L LSQEKYA+DL+++ G+ CKP TPLS++EKLS+ EGT + D+T+YR +VGAL Sbjct: 3490 KDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGAL 3669 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF++NKVC FLHAPTT H+ A KRI+RYVK+T++ GL F ++PS LVS F Sbjct: 3670 QYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGF 3849 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAG DDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATAE++WVQ Sbjct: 3850 SDADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQ 4029 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L+ELG++S + WCDN+GA YLSAN +FHARTKHIE+DFHFV ERVA KLL+I +I Sbjct: 4030 TLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYI 4209 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNL 854 +KDQVADGFTKA+ + E FK+NLNL Sbjct: 4210 STKDQVADGFTKAIPVRQMEMFKNNLNL 4293 Score = 277 bits (600), Expect = 1e-73 Identities = 141/246 (57%), Positives = 162/246 (65%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFV PSAT*S I +S + ATLS TK*KS S+CFV A*K LA++Y+AP LSH Sbjct: 4247 AFVKPSAT*SLVDIYAISSNFLATLSLTK*KSTSICFVRA*KIGLAERYLAPRLSHHSLA 4068 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S + CTH+ SAVA A ALY AS+LDL+TVACFLA H+ R GPKN A PPV+ Sbjct: 4067 ARGDSTPSSCNKVCTHIISAVALARALYSASVLDLDTVACFLALHDTRFGPKNTAKPPVD 3888 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS PAQS EK LTS EG L RP+ +V TYL I A +* VVGACKN*HTLF Sbjct: 3887 LLSSGDPAQSASEKPLTSREGFLQNLRPVSTVYLTYLKILFTAAQ*VVVGACKN*HTLFI 3708 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 KEISGLV VKY +APT LY V S VPS D+FS +D+GV GL P +S Sbjct: 3707 EKEISGLVKVKYCKAPTTLLY*VES*GPSNVPSFTDNFSEVDRGVLTGLHSYIPTRRRRS 3528 Query: 1620 VAYFS* 1637 AYFS* Sbjct: 3527 DAYFS* 3510 Score = 181 bits (389), Expect = 2e-44 Identities = 101/246 (41%), Positives = 137/246 (55%) Frame = +2 / -1 Query: 899 SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETG 1078 SFCK I NLIF N ++ SHKMK+ +LC+SMKD I R++ S I+TP G Sbjct: 4248 SFCKTICNLIFSRYICNFKQLSSYPFSHKMKVNFYMLCTSMKDWISRKILSSKIITP*LG 4069 Query: 1079 SLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC* 1258 R FY+Q L L+P++F C I + R LFSS P* +I + K+CK +C* Sbjct: 4068 CSRRFYSQFLQQSLYPHNFCCCISQSFILSFSTRP*YCSLFSSTP*YKIWA*KHCKTSC* 3889 Query: 1259 TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVY 1438 +SVI SCP+ I K+T+K R E+ T I +F+IS SC ++C W M*+LTHL+Y Sbjct: 3888 SSVIWRSCPICI*KTTNKQRGIPTELKTCINCIFNIS*DPFYSCPMSCSWSM*ELTHLIY 3709 Query: 1439 SKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQV 1618 K +I SC+ IL ST T + S + +CS *FF RS FT + ++ Sbjct: 3708 RKRNIWSCQS*IL*STNYTPILSRILRSKQCSLIY**FF*G*QRSTDRFTLIHTNPS*KI 3529 Query: 1619 CCIFFL 1636 CI L Sbjct: 3528 RCILLL 3511 Score = 91.8 bits (194), Expect(2) = 5e-31 Identities = 52/139 (37%), Positives = 74/139 (53%) Frame = -2 / +3 Query: 1310 CECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*S 1131 C FF RLGR+ R*Q NR C++F S M C*KTS+ ++*+ V + C+S + Sbjct: 3837 C*WFFRCRLGRISR*QKINRRFCSVFRPKSCIMEC*KTSYSIKV*Y*S*V*SSG*CNSRN 4016 Query: 1130 HMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLG 951 ++G G + S +V* WS + C S+LSC KA+ SFC R+ Sbjct: 4017 YVGTDFVARTGSRIASSSQAMV**SWS*VSFC*SNLSCSYKAYRS*LSFCERKGS*KVA* 4196 Query: 950 HSVYSFKRSSC*WVYKSFT 894 + +Y + RS C W YKS+T Sbjct: 4197 NCIYIY*RSGCRWFYKSYT 4253 Score = 64.3 bits (134), Expect(2) = 5e-31 Identities = 38/100 (38%), Positives = 51/100 (51%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 SR++C W +*T +S + RK IS N SG Y + C +VF+ K Sbjct: 3510 SREVCIGSSTTGWYV*V*TGQYSSVNLRKIISK*GNIAWTSGFYSV*ECSWCFTVFNFDK 3689 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWS 1338 T Y K GV V TC+N++SL SC+ KIC Y+ Y S Sbjct: 3690 TRYFFFDK*GVSVLTCSNYNSLGSCKKDLKIC*IYS*YRS 3809 Score = 122 bits (260), Expect = 1e-26 Identities = 93/228 (40%), Positives = 115/228 (50%) Frame = -1 / +2 Query: 1656 RMHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLF 1477 RM +K++M + + L VN LL QKNY +EH LL+ V VL+ Sbjct: 3491 RMVSCLVKRSMHRIFYDGLVCMSVNRSVLLCQPQKNYQ*MREHCLDLRILLSIGV*LVLY 3670 Query: 1476 SI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLF 1297 SI* QD I * RCVS YM Q Q QL *DM NI+ I V S L L V+F Sbjct: 3671 SI*L*QDQIFLFR*IRCVSSYMLQLQLIGQL*KGS*DMLNIQLIQVLSSVGIPLCLLVVF 3850 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 +Q GQD MT+ QQ LQ F I +HG+LENK + L + + M Q K G Sbjct: 3851 QMQIGQDLQMTEDQQEVLQCF*AQILYHGVLENKLQYQGLVLKLSIKLWLMQQQKLCGYR 4030 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 C ++W * L P GV +LE L I SFML QS + FIL E+ Sbjct: 4031 LCCKNWE*NRLEQPSYGVIILELSIFLLIQSFMLVQSI*KLTFIL*EK 4174 Score = 77.1 bits (162), Expect(2) = 3e-15 Identities = 44/97 (45%), Positives = 57/97 (58%) Frame = +1 / -3 Query: 1195 LVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILL 1374 LVF* +M D K LQ LL CHL ILP+L+ K H Q + + D Y Y+ HIL Sbjct: 3952 LVF*HSMIQDLGLKTLQNLLLIFCHLEILPNLHLKNH*QAERDSYRT*DLYQLYI*HILR 3773 Query: 1375 YAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 QL +EL L HV+T+TP L +++Y VL NT +H Sbjct: 3772 SFLQLPNEL*LEHVRTDTPYLSKKKYLVLSKLNTVKH 3662 Score = 31.8 bits (63), Expect(2) = 3e-15 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 L+QNE+ AL+ HERLD Q LQ HT Sbjct: 4171 LSQNESQLLYALYEHERLD*QKDT*LQDYHT 4079
>LOC_Os08g17990:12008.t01669:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6087 Score = 446 bits (968), Expect = e-124 Identities = 187/279 (67%), Positives = 226/279 (81%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 N L LSQE+YAT+++K+ G+ CKPT TPLS++EKLS +G + D T+YR +VGA Sbjct: 3583 NSQGLVLSQERYATEVLKRVGMAKCKPTNTPLSTSEKLSSTQGAVLGQNDATQYRSIVGA 3762 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPDISF+VNKVC +L PT H++A KRI+RY++ T+++GL ++S STL+SA Sbjct: 3763 LQYLTLTRPDISFSVNKVCQYLQQPTVDHWSAVKRILRYIQGTVSLGLKINRSASTLISA 3942 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 F ++DWAGC+DDRRSTGGFA+F G NL+SWSARKQATVSRSS EA YKALANATAEVIW+ Sbjct: 3943 FFDADWAGCVDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKALANATAEVIWI 4122 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 + +L E+GIK WCDN+GATYLSAN VFHARTKHIEIDFHFV E+VA KLLDIRF Sbjct: 4123 RKLLDEIGIKQPNAARLWCDNLGATYLSANPVFHARTKHIEIDFHFVREQVAQKLLDIRF 4302 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 I + DQVADGFTKAL + E FK+NLNL KL*LR GVK Sbjct: 4303 ISTDDQVADGFTKALPVRRLEMFKNNLNLGKL*LRWGVK 4419 Score = 270 bits (583), Expect = 3e-71 Identities = 140/246 (56%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 +AFV PSAT*S INRMS + AT S TK*KSIS+C VLA*KT LAD+ VAP LSH Sbjct: 4346 RAFVKPSAT*SSVEINRMSSNFCATCSLTK*KSISICLVLA*KTGLADR*VAPRLSHHNL 4167 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 FIP S + H+TSAVAFASALY AS+LDL+TVACFLA E +L PKN A PPV Sbjct: 4166 AAFGCFIPISSNNFLIHITSAVAFASALYSASVLDLDTVACFLALQETKLDPKNTAKPPV 3987 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS HPAQS +KAL V DLL F P +V Y +I A++*+ VG CK HTL Sbjct: 3986 DLLSSTHPAQSASKKALIKVLADLLIFSPRLTVPCIYRSILFTALQ*STVGCCKYWHTLL 3807 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T KE+SG VSVKY +APT Y V S P + D+FS +DKGV VGL P F Sbjct: 3806 TEKEMSGRVSVKYCKAPTILRYCVASFCPRTAP*VDDNFSEVDKGVLVGLHLAMPTRFRT 3627 Query: 1617 SVAYFS 1634 SVAY S Sbjct: 3626 SVAYLS 3609 Score = 169 bits (364), Expect = 4e-41 Identities = 91/232 (39%), Positives = 129/232 (55%) Frame = +2 / -1 Query: 818 SLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIY 997 S+FNT P SQL QVEI+ + K S C+ + +LI NKPNV + +CN SHK+KIY Sbjct: 4425 SIFNTPPQSQLTQVEIVLKHLKPSNRKSLCEAVGDLIIS*NKPNV*QLLCNLFSHKVKIY 4246 Query: 998 LNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDA 1177 L + MKD I RQ+ G+ I+TP + + FY+ +* +PY S GIC CLV L A Sbjct: 4245 LYMFSPCMKDWISRQIGGTKIITP*SCGIWLFYSNFI*QFSYPYYLSRGICKCLVLSLCA 4066 Query: 1178 RSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRM 1357 R + LFS P N++R K+CK + + VI CPV + KST + ++*+ R Sbjct: 4065 RPRHRRLFSGAPGNQVRP*KHCKASGGSPVINTPCPVCVEKSTDQSTC*SVDL*SKTYRS 3886 Query: 1358 FHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 +I Y L S V +* L + + KG++R C IL ST+ T + + Sbjct: 3885 LYIPEYPLYSTPVIHRRLL*ILAYFIDRKGNVRPG*C*IL*STHNTPILCGI 3730 Score = 95.0 bits (201), Expect(3) = 8e-34 Identities = 47/120 (39%), Positives = 69/120 (57%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C ++F+T *+ L C+ + +FT T SL C+ + + + W+K QQ+ Y + Sbjct: 3759 CFTIFNTNPA*HFLFCQ*SMPIFTATYGGSLECCKEDTPVYTRNGKSWTKDQQISKYFDQ 3938 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 CFF RLGR+ *Q +R +C++F * F+ KTS +*HRG VQGT KCH * +M Sbjct: 3939 CFFRRRLGRVC**QEIHRRLCSVFRV*LGFLERQKTSDGV*V*HRG*VQGTCKCHG*GNM 4118 Score = 57.4 bits (119), Expect(3) = 8e-34 Identities = 37/81 (45%), Positives = 44/81 (54%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GV +L P CL I SFM + R*IF L E L + TFGLF IK Q+L++ Sbjct: 4175 GVIILVPPICLLIQSFMQGLNI*R*IFTL*ENRLHKSC*TFGLFQLMIKSPTASQRLFLF 4354 Query: 888 KVLKTSNIIST**SCD*GRVL 826 L+ IST SCD*G VL Sbjct: 4355 DGLRCLRTISTWVSCD*GGVL 4417 Score = 30.9 bits (61), Expect(3) = 8e-34 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -2 / +3 Query: 1634 RKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRN 1530 R+IC R + +W ++ + HSFI RK + + R+ Sbjct: 3609 REICYRSSEASWHGQVQANQHSFINLRKVVINSRS 3713 Score = 63.8 bits (133), Expect(2) = 2e-19 Identities = 37/82 (45%), Positives = 49/82 (59%) Frame = +1 / -3 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 +*HP+ ITT S*D *+ Q + L*+ ++LD +*TEC ++Q L+Q+ENLS Sbjct: 4420 L*HPTSITTYPS*DCS*TSQAVEQEEPL*SRRRLDHQLK*TECLATFVQPVLSQSENLSL 4241 Query: 1003 CALF*HERLDWQTSMWLQHCHT 1068 HERLD QT W Q HT Sbjct: 4240 YV*SLHERLD*QTDRWHQDYHT 4175 Score = 52.8 bits (109), Expect(2) = 2e-19 Identities = 28/57 (49%), Positives = 31/57 (54%) Frame = +1 / -3 Query: 1135 QLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKH 1305 Q WHL VPCT P C* LVF ++ K * K LQ+ CH LPSL KKH Sbjct: 4108 QPWHLQVPCTQPLC*T*TPSLVFWRSRKPS*TLKTLQSLRWISCHQHTLPSLRRKKH 3938 Score = 53.8 bits (111), Expect(2) = 3e-15 Identities = 32/66 (48%), Positives = 34/66 (51%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 VLF QTGQ MT LQ F L F G ENK LA R TRH QMP+L+ Y Sbjct: 3938 VLFSTQTGQGVLMTGDPPEALQCF*GLTWFPGAPENKRRCLGLAQRLSTRHLQMPRLR*Y 4117 Query: 1125 GCNPC* 1108 G C* Sbjct: 4118 G*ENC* 4135 Score = 49.2 bits (101), Expect(2) = 3e-15 Identities = 22/44 (50%), Positives = 26/44 (59%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVY 939 +V* W H+ VC SSLSC + + DRFS C R C HSVY Sbjct: 4173 MV**SWCHLSVC*SSLSCKD*TYRDRFSLCERTGCTKVARHSVY 4304
>LOC_Os02g40250:12002.t03661:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8551 Score = 446 bits (968), Expect = e-124 Identities = 182/279 (65%), Positives = 229/279 (82%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 NKN + L+QEKYA D++K+ G++ CKP TPLS++EKLS+ EGT + D T YR +VGA Sbjct: 7712 NKNGILLTQEKYAADVLKRVGMEDCKPVSTPLSTSEKLSINEGTVLGENDATHYRSIVGA 7891 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPDISF+VNKVC FLH PTTVH+ A KRI+RY+KHT+++GL S+S S LVS Sbjct: 7892 LQYLTLTRPDISFSVNKVCQFLHTPTTVHWAAVKRILRYLKHTVDLGLKISRSSSLLVSG 8071 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 +S++DWAGCLDDRRSTGGFA+F G NL+SWSA KQATVSRSS E+ YKALANATAE++WV Sbjct: 8072 YSDADWAGCLDDRRSTGGFAVFLGTNLVSWSAHKQATVSRSSTESEYKALANATAEIMWV 8251 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 QS+L ELG+++ K WCDN+GATYLS+N VFHARTK+IEIDFHFV ERV+ +LL+I F Sbjct: 8252 QSVL*ELGVQAPKASRLWCDNLGATYLSSNPVFHARTKYIEIDFHFVRERVSQRLLEIAF 8431 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 + ++DQVADG TK L Q E F++NL+L +L LR+ V+ Sbjct: 8432 VPTQDQVADGLTKPLPLQLLEKFRYNLDLERLRLREDVR 8548 Score = 276 bits (598), Expect = 2e-73 Identities = 138/244 (56%), Positives = 160/244 (65%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV PSAT*S N +S +L T S TK*KSISM VLA* T D+ VAP LSH + Sbjct: 8469 FVRPSAT*SCVGTNAISSNL*DTRSRTK*KSISMYLVLA*NTGFDDR*VAPRLSHHSREA 8290 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L + P+S+ DCTH+ SAVA A ALY S+L+ +TVAC A H+ R PKN A PPVER Sbjct: 8289 LGAWTPSSYKTDCTHIISAVALAKALYSDSVLERDTVACL*ALHDTRFVPKNTAKPPVER 8110 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS+HPAQS E LT+ E DLL RP +VCF YL I A +*TVVG CKN*HTL T Sbjct: 8109 LSSKHPAQSASEYPLTNSEEDLLILRPRSTVCFRYLRILFTAAQ*TVVGVCKN*HTLLTE 7930 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSV 1622 KEISGLV+V+Y APT L V S VPS+ D+FS++DKGV GLQ P F S Sbjct: 7929 KEISGLVNVRYCNAPTILL*CVASFSPRTVPSLIDNFSLVDKGVLTGLQSSIPTLFNTSA 7750 Query: 1623 AYFS 1634 AYFS Sbjct: 7749 AYFS 7738 Score = 179 bits (385), Expect = 6e-44 Identities = 109/272 (40%), Positives = 149/272 (54%) Frame = +2 / -1 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L N LP S + V I+ E+FK L FC+ I LI NK N+ + + +KMKIYL Sbjct: 8551 LSNILPQS*PF*V*IVSELFKQLQRQWFCQTICYLILRRNKCNL*QSLRYPFPYKMKIYL 8372 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 NVL S MK I R + S I+TP +GSL ++ L*+ L+P++FS I * L+ Sbjct: 8371 NVLGSCMKHWIRR*ISRSKIITP*SGSLGCLDSKFL*NRLYPHNFSSCIS*SLIFRFCT* 8192 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMF 1360 + + GLF S P* +I S+K+ K T TSVI*ASCP+ I ST + R + T I MF Sbjct: 8191 ARHCGLFVSTP*YQICSQKHSKATSGTSVI*ASCPISI*ISTDQQ*RRSTYLETKINCMF 8012 Query: 1361 HISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFH 1540 IS + C +NC WCM +LTH V +G+I S +C+IL T TS+ + C+F Sbjct: 8011 QISKNSFYCCPMNCSWCMQELTHFVNREGNIWSSQCKIL*CTNNTSIMRCIIFSKNCTFI 7832 Query: 1541 ER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 +R F +R RS F + F + I L Sbjct: 7831 DRQFLTSRQRSTYRFAVFHSHSFQHISSILLL 7736 Score = 84.0 bits (177), Expect(2) = 2e-27 Identities = 46/114 (40%), Positives = 65/114 (57%) Frame = -2 / +1 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T Y L C Q V V TN+SSL S + S I ETY+ WS+ + + F + F LGR Sbjct: 7915 TRYFLLC*QSVSVLAYTNYSSLGSSKKNS*ISETYS*SWSQDK*IFFTVGQWIFRC*LGR 8094 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAI 1116 M R*QTF+ W+C +F S M C +TSH + +R + G S C+ *+++G + Sbjct: 8095 MLR*QTFHWWLCCVFGNKSGIMECSQTSHSVSLKYRI*I*GFS*CNC*NYVGTV 8256 Score = 59.7 bits (124), Expect(2) = 2e-27 Identities = 32/82 (39%), Positives = 45/82 (54%) Frame = -2 / +1 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSFTY 891 +V* WS + + +SS+SC N+ H*DRFSFC + S+ RSS W K+ Sbjct: 8302 MV**SWSDLSIVESSVSCKNQVH*DRFSFCTGTGISKIARDCICSYARSSSRWSDKTTAA 8481 Query: 890 TKF*RLQT*SQLDKVVIKEGC* 825 *++Q S+ KV I+ GC* Sbjct: 8482 AIA*KVQIQSRPRKVKIEGGC* 8547 Score = 68.0 bits (142), Expect(3) = 4e-17 Identities = 47/101 (46%), Positives = 53/101 (52%) Frame = -1 / +3 Query: 1284 GQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*R 1105 GQDA*MTDV V L F + I +HG+L NKP R * M LK G + R Sbjct: 8088 GQDA*MTDVPLVALLCFWEQIWYHGVLTNKPQCLAQVQNLNIRL*LMQLLKLCGYSLFYR 8267 Query: 1104 SWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFIL 982 + K RLP GV +LE I FM E STLR*IFIL Sbjct: 8268 NLESKHPRLPDYGVIILERLIYRRIQCFMQEPSTLR*IFIL 8390 Score = 33.6 bits (67), Expect(3) = 4e-17 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = -1 / +3 Query: 1485 VLFSI*HLQDLISPLL*TRCVSFYMHQPQFTSQ 1387 V +SI H D I P L T+CVS +HQ QF Q Sbjct: 7887 VHYSILH*LDQIFPSLLTKCVSSCIHQLQFIGQ 7985 Score = 24.9 bits (48), Expect(3) = 4e-17 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = -1 / +3 Query: 942 LFIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVLN 823 LF++KIK M Q LK+S+ I T* D*GR+L+ Sbjct: 8430 LFLRKIK*QMV*QNHCRCNCLKSSDTI*T*KG*D*GRMLD 8549 Score = 37.7 bits (76), Expect(3) = 8e-08 Identities = 17/29 (58%), Positives = 17/29 (58%) Frame = +1 / -3 Query: 982 QNENLSQCALF*HERLDWQTSMWLQHCHT 1068 QNENLSQC F HE LD LQ HT Sbjct: 8390 QNENLSQCTWFLHETLDSTIDKSLQDYHT 8304 Score = 35.4 bits (71), Expect(3) = 8e-08 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 / -3 Query: 1192 WLVF*QTMK*D*VQKILQTHLLNVCHLGILPS 1287 WLV +M D K Q+H NVCHL ILP+ Sbjct: 8180 WLVCEHSMIPDLFPKTQQSHQWNVCHLSILPN 8085 Score = 34.1 bits (68), Expect(3) = 8e-08 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 / -3 Query: 1339 DQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQV 1458 DQ YVS I + L +EL LV+ +T+T C Q+R+Y V Sbjct: 8033 DQDQLYVSDI*EFFLLLPNEL*LVYARTDTLC*QRRKYLV 7914
>LOC_Os06g47730:12006.t04459:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 5894 Score = 445 bits (967), Expect = e-124 Identities = 186/276 (67%), Positives = 225/276 (81%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA DL+KK G+ CKP+ TP+S +EKLSL EGTP+ VD T+YR +VGALQ Sbjct: 5061 NGIVLTQEKYAADLLKKVGMLDCKPSNTPMSVSEKLSLHEGTPLGDVDATQYRSIVGALQ 5240 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F+VNKVC +LHAPTT H+ A KRI+RY+K +GLN KS STLVS FS Sbjct: 5241 YLTLTRPDIAFSVNKVCQYLHAPTTDHWIAVKRILRYLKQCTCLGLNIHKSGSTLVSGFS 5420 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG LDDRRSTGGFA+F G NL+SWSARKQATVSRSS E+ YKA+ANATAE++WVQ+ Sbjct: 5421 DADWAGSLDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTESEYKAIANATAEIMWVQT 5600 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L ELGIKS +T WCDN+GA YLSAN VFHARTKHIE+D++FV ERV+ KLL+I F+ Sbjct: 5601 LLTELGIKSPQTAKIWCDNLGAKYLSANPVFHARTKHIEVDYYFVRERVSQKLLEIDFVS 5780 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 S DQVADGFTK L + E+FK NLNL + LR+GV Sbjct: 5781 SNDQVADGFTKPLSVRLLENFKGNLNLSRSRLREGV 5888 Score = 273 bits (591), Expect = 2e-72 Identities = 140/246 (56%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + FV PSAT*S E +SKS T S TK* S S+CFVLA* T A++Y+AP LSH Sbjct: 5818 RGFVKPSAT*SLEETKSISKSF*LTRSLTK**STSICFVLA*NTGFAERYLAPRLSHHIF 5639 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 V L IP+S CTH+ SAVAFA ALY S+LDL+TVACFLA E R P+ ANPPV Sbjct: 5638 AV*GLLIPSSVRSVCTHIISAVAFAIALYSDSVLDLDTVACFLALQETRFDPRKTANPPV 5459 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS E LT V+ DL F P C YL I L A++*+VVGACK * TL Sbjct: 5458 DLLSSKLPAQSASENPLTKVDPDL*IFSPKQVHCLRYLNILLTAIQ*SVVGACKY*QTLL 5279 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K ISGLV VKY +APT LY V ST GVPS ++SFS+ D GV GLQ P FF K Sbjct: 5278 TEKAISGLVRVKYCKAPTILLY*VASTSPKGVPSCKESFSLTDIGVFDGLQSNIPTFFNK 5099 Query: 1617 SVAYFS 1634 S AYFS Sbjct: 5098 SAAYFS 5081 Score = 172 bits (371), Expect = 5e-42 Identities = 103/260 (39%), Positives = 140/260 (53%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V++ F++ + C+ I NLI NK N + + S+K+ + N+LCSSMK + Sbjct: 5858 VQVAFKILQKSY*QRLCETICNLIIRGNKINF*KLLTYPFSNKIIVNFNMLCSSMKHWVC 5679 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP* 1216 R++ GS IVTP LR F + LHP++F C IC C + A G LFSS P Sbjct: 5678 RKILGSKIVTPYLCCLRTFNS*FCQECLHPHNFCCCICNCFIFRFCAGPGYCSLFSSTPR 5499 Query: 1217 NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEV 1396 N I S+K CKPT *+S+I*A+ PV IR+ST++ L I* + IS Y+L S + Sbjct: 5498 N*I*SQKNCKPTS*SSII*ATSPVCIRESTNQSGSRLMNI*PQTSALLKIS*YSLDSYPM 5319 Query: 1397 NCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSG 1576 C W M LT+ V KG I S + IL ST T + SS++ RCSF R FF RS Sbjct: 5318 ICSWSMQILTNFVDRKGYIWSSES*IL*STNNTPILSSINISQRCSFM*RKFFTY*HRSI 5139 Query: 1577 CGFTTL*ARLFYQVCCIFFL 1636 FT + Q+ +FFL Sbjct: 5138 *WFTIQHSHFL*QISGVFFL 5079 Score = 80.8 bits (170), Expect(2) = 2e-21 Identities = 43/122 (35%), Positives = 66/122 (54%) Frame = -2 / +2 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C ++F+++ T Y L C+Q + +F C+N+ SL SCQ KI + +K+ V + Sbjct: 5231 CFTIFNSH*TRYSLFCQQSLSIFACSNYRSLDSCQENIKIS*AMHLFGAKYS*VWIHFG* 5410 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 * RLG R* N WVC+ S F+ C*KT + Q+ HR + KC+S +++ Sbjct: 5411 WIL*CRLGW*LR**KINWWVCSFSGIKSSFLEC*KTGYSIQVQHRI*I*SNCKCNSRNYV 5590 Query: 1124 GA 1119 GA Sbjct: 5591 GA 5596 Score = 42.8 bits (87), Expect(2) = 2e-21 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -2 / +2 Query: 1082 DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 DS +V*Q WS + C+ S+SC*NKA+* FC R Sbjct: 5633 DSKDMV*QSWSQVSFCKPSVSC*NKAY*S*LLFC*R 5740 Score = 82.6 bits (174), Expect(2) = 6e-21 Identities = 49/107 (45%), Positives = 60/107 (56%) Frame = -1 / +1 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+QTG A*M + Q VGLQ+F D I F G+LEN+ +P A + QM Q K GC Sbjct: 5419 LMQTGLVA*MIEDQLVGLQFFWDQI*FLGVLENRLQYPGPAQNLNIKQLQMQQQKLCGCK 5598 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCE 976 *++ K LR GVT+LEP L FMLEQS L+ IL E Sbjct: 5599 HS*QN*ELKVLRQQRYGVTILEPSIFLQTQCFMLEQSILKLTIILLE 5739 Score = 39.6 bits (80), Expect(2) = 6e-21 Identities = 31/79 (39%), Positives = 39/79 (49%) Frame = -1 / +1 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 KKN *+ +VN LL KN+L KEHL LL+ V VL++I* D Sbjct: 5080 KKNTPLIC*RKWECWIVNHQILLCQ*VKNFLYMKEHLWEMLMLLSIGVLLVLYNI*LSLD 5259 Query: 1455 LISPLL*TRCVSFYMHQPQ 1399 I P L T+ V+ M Q Q Sbjct: 5260 QI*PFLSTKFVNICMLQLQ 5316 Score = 68.0 bits (142), Expect = 2e-10 Identities = 43/108 (39%), Positives = 52/108 (48%) Frame = +1 / -3 Query: 982 QNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPC 1161 QN + Q ALF*HE L Q WLQ CHT + S F + AP * L HL + Sbjct: 5733 QNNSQLQYALF*HETLGLQKDTWLQDCHTISLLSEDF*FLVLSGVFAPT*FLLLHLQLLY 5554 Query: 1162 TLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKH 1305 C W VF* + K D + + LQTH L HL PSL+ + H Sbjct: 5553 IQILCWTWIL*PVF*HSKKLDLIPEKLQTHQLIFYHLSYQPSLHQRIH 5410
>LOC_Os10g13690:12010.t01096:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7044 Score = 445 bits (965), Expect = e-124 Identities = 183/284 (64%), Positives = 225/284 (79%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L LSQ+KY D++K+ G+ CKP PTPLS++EKLS+ EG+ + D T YR +VGALQ Sbjct: 5047 DGLVLSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQ 5226 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F++NKVC FLH+PT H++A KRI+RY++ T+ +GL KS S LV+AFS Sbjct: 5227 YLTLTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFS 5406 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGC+DDRRST GFA+F G NLISWS RKQATVSRSS EA YKALANATAEVIWVQ+ Sbjct: 5407 DADWAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQT 5586 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +LKELGI+ WCDN+GATYLSAN +FHARTKHIE+ FHFV ERVA KLL++RF+ Sbjct: 5587 LLKELGIQCPSMARLWCDNLGATYLSANPIFHARTKHIEVYFHFVRERVAQKLLEVRFVS 5766 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVKQAGSVRV 803 + DQVADGFTK L Q +F+HNLNL KL*LR V+ S R+ Sbjct: 5767 TNDQVADGFTKPLSVQKLREFQHNLNLSKL*LRGAVRVEISFRI 5898 Score = 238 bits (514), Expect = 9e-62 Identities = 129/246 (52%), Positives = 150/246 (60%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT S N S+S AT S TK K SMCFVLA* LADK VAP LSH + Sbjct: 5795 VKPSATWSLVETNLTSRSFCATRSLTKWK*TSMCFVLA*NIGLADK*VAPKLSHHNLAMD 5616 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 IP+SF+ CT +TSAVA A ALY AS+LDL+TVAC ++RL P+N ANP V+ L Sbjct: 5615 GHCIPSSFNKVCTQITSAVALAKALYSASVLDLDTVACLRTLQDIRLLPRNTANPLVDLL 5436 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS HPAQS E A TS++ D PI +V YL I L A + VG CKN HTL K Sbjct: 5435 SSTHPAQSASENAFTSID*DFCILSPIPTVPLKYLIILLTADQCVKVGECKNWHTLLIEK 5256 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 ISG V+V+Y RAPT L LV S +PS D+FS +DKGVG GLQ P F S Sbjct: 5255 AISGRVNVRYWRAPTILL*LVASPGPKRLPSCTDNFSDVDKGVGAGLQVDIPILFNISCV 5076 Query: 1626 YFS*ER 1643 Y S*+R Sbjct: 5075 YLS*DR 5058 Score = 125 bits (267), Expect(2) = 6e-34 Identities = 69/164 (42%), Positives = 94/164 (57%) Frame = +2 / -1 Query: 827 NTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNV 1006 N+ P S L QV+I+ + K L T F + IS L+ NK N+++ + N SHKM+I NV Sbjct: 5874 NSPPQS*L*QVKIVLKFAKFLNTERFGEAISYLVISRNKSNLKKLLRNPFSHKMEINFNV 5695 Query: 1007 LCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSG 1186 LC MK + RQ+ + I+TP++ R YT+ L* LHP F C I LV C RS Sbjct: 5694 LCPCMKYWVSRQISCTQIITPQSCHGRTLYTKFL*QSLHPDYFCCCIGQSLVFCFCTRSR 5515 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCR 1318 S LF+ P +I S KY KPT +S+I SCP+ I + +K R Sbjct: 5514 YSSLFAYTPGYKITS*KYSKPTSRSSIINTSCPICI*ECIYKHR 5383 Score = 40.5 bits (82), Expect(2) = 6e-34 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +2 / -1 Query: 1418 KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FF 1555 +L +L+ KG+IRS +CQIL+S+ T V S + + F R*FF Sbjct: 5283 ELAYLIN*KGNIRSSQCQILESSNNTPVISCISRT*KTPFLYR*FF 5146 Score = 82.6 bits (174), Expect(3) = 3e-25 Identities = 39/95 (41%), Positives = 55/95 (57%) Frame = -2 / +3 Query: 1250 WVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLF 1071 WVC I *S+ + C +TS+C I*+R R+QG +C+S S++GA KG Y Sbjct: 5451 WVCCISRK*SYILECTQTSYCI*I*YRSRIQGFGQCNSRSNLGANFVKGTWYTMSVHGKI 5630 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 +V* ++ VC ++SC +KAH* F FC R C Sbjct: 5631 VV**FGCNLFVC*PNISCKDKAH*SLFPFCERTGC 5735 Score = 48.3 bits (99), Expect(3) = 3e-25 Identities = 34/105 (32%), Positives = 48/105 (45%) Frame = -2 / +3 Query: 1589 L*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTC 1410 L* + F+ RK I GR ++R *+Q S V D T*Y L G+ V Sbjct: 5112 L*ACANPFVNIRKIICTGRESFRSWRCN*LQEYCWSSPVSDIDST*YCLFN**GMPVLAL 5291 Query: 1409 TNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRM 1275 + +L C +I E Y Y ++ ++ Y C+C RLGRM Sbjct: 5292 SYFDTLVCC*KNYQIFERYCWYGTQDTEISVYACKCILRCRLGRM 5426 Score = 23.5 bits (45), Expect(3) = 3e-25 Identities = 12/34 (35%), Positives = 22/34 (64%) Frame = -2 / +3 Query: 923 SC*WVYKSFTYTKF*RLQT*SQLDKVVIKEGC*T 822 S *W++++ ++ R+ S L KV+I+ GC*+ Sbjct: 5778 SS*WLHQTAQCSETSRISAQS*LVKVMIEGGC*S 5879 Score = 76.7 bits (161), Expect(2) = 2e-14 Identities = 57/156 (36%), Positives = 74/156 (47%) Frame = -1 / +2 Query: 1293 IQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNP 1114 +Q GQD M + VGL YF ++I + G+ NK L+ DL +Q TR M Q K GC Sbjct: 5408 MQIGQDVLMIEDLLVGLLYF*EVILYPGVYANKLLYLDLVQKQNTRLWPMQQQK*SGCKL 5587 Query: 1113 C*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFI 934 C*R+ V GV + CL FM QSTL+ I IL E L+ + LF+ Sbjct: 5588 C*RNLVYNVRPWQDCGVIIWVQLICLLTQYFMQGQSTLKFISIL*ENGLRRSFLRLDLFL 5767 Query: 933 QKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVL 826 K LM V + + I T S D*G +L Sbjct: 5768 LMTK*LMASPNRSVFRNFANFSTILTCQSYD*GGLL 5875 Score = 29.9 bits (59), Expect(2) = 2e-14 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = -1 / +2 Query: 1638 LKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQ 1459 LK N+ +*+ + V+ L QKNYL K *+ L T V L SI*H Sbjct: 5063 LKTNIHMIY*RE*VCRPVSLRQPLCQHQKNYLYRKGVF*VLEMQLITGVLLELSSI*H*L 5242 Query: 1458 DLISP 1444 DLI P Sbjct: 5243 DLILP 5257 Score = 57.0 bits (118), Expect = 4e-07 Identities = 45/114 (39%), Positives = 54/114 (47%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLV 1155 L+QN N QCAL HE L QT+ + HT +Y PL AP L L H Sbjct: 5725 LSQNGNKLQCALSLHEILG*QTNKLHPNYHTTILPWTDIVYQVPLTKFAPRLLLLLHWPK 5546 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV* 1317 PC L *I Q LV + *D +I QTH H ILP+L+ + H Q * Sbjct: 5545 PCILLLY*I*IQ*LVCVHSRI*DYFLEIQQTH**IFYHQHILPNLHLRMHLQA* 5384
>LOC_Os02g23870:12002.t02085:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5833 Score = 444 bits (964), Expect = e-124 Identities = 181/268 (67%), Positives = 224/268 (83%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K+ L LSQEKYA+DL+++ G+ CKP TPLS++EKLS+ EGT + D+T+YR +VGAL Sbjct: 5000 KDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGAL 5179 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF++NKVC FLHAPTT H+ A KRI+RYVK+T++ GL F ++PS LVS F Sbjct: 5180 QYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGF 5359 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAG DRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATAE++WVQ Sbjct: 5360 SDADWAGSPYDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQ 5539 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L+ELG++S + WCDN+GA YLSAN +FHARTKHIE+DFHFV ERVA KLL+I +I Sbjct: 5540 TLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYI 5719 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNL 854 +KDQVADGFTKA+ + E FK+NLNL Sbjct: 5720 STKDQVADGFTKAIPVRQMEMFKNNLNL 5803 Score = 275 bits (594), Expect = 8e-73 Identities = 140/246 (56%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFV PSAT*S I +S + ATLS TK*KS S+CFV A*K LA++Y+AP LSH Sbjct: 5757 AFVKPSAT*SLVDIYAISSNFLATLSLTK*KSTSICFVRA*KIGLAERYLAPRLSHHSLA 5578 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S + CTH+ SAVA A ALY AS+LDL+TVACFLA H+ R GPKN A PPV+ Sbjct: 5577 ARGDSTPSSCNKVCTHIISAVALARALYSASVLDLDTVACFLALHDTRFGPKNTAKPPVD 5398 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LS PAQS EK LTS EG L RP+ +V TYL I A +* VVGACKN*HTLF Sbjct: 5397 LLSYGDPAQSASEKPLTSREGFLQNLRPVSTVYLTYLKILFTAAQ*VVVGACKN*HTLFI 5218 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 KE+SGLV VKY +APT LY V S VPS DSFS +D+GV GL P +S Sbjct: 5217 EKEMSGLVKVKYCKAPTTLLY*VES*GPSNVPSFTDSFSEVDRGVLTGLHSYIPTRRRRS 5038 Query: 1620 VAYFS* 1637 AYFS* Sbjct: 5037 DAYFS* 5020 Score = 182 bits (391), Expect = 8e-45 Identities = 100/246 (40%), Positives = 137/246 (55%) Frame = +2 / -1 Query: 899 SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETG 1078 SFCK I NLIF N ++ SHKMK+ +LC+SMKD I R++ S I+TP G Sbjct: 5758 SFCKTICNLIFSRYICNFKQLSSYPFSHKMKVNFYMLCTSMKDWISRKILSSKIITP*LG 5579 Query: 1079 SLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC* 1258 R FY+Q L L+P++F C I + R LFSS P* +I + K+CK +C* Sbjct: 5578 CSRRFYSQFLQQSLYPHNFCCCISQSFILSFSTRP*YCSLFSSTP*YKIWA*KHCKTSC* 5399 Query: 1259 TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVY 1438 +SVI SCP+ I K+T+K R E+ T I +F+IS SC ++C W M*+LTHL+Y Sbjct: 5398 SSVIWRSCPICI*KTTNKQRGIPTELKTRINCIFNIS*DPFYSCPMSCSWSM*ELTHLIY 5219 Query: 1439 SKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQV 1618 K ++ SC+ IL ST T + S + +CS *FF RS FT + ++ Sbjct: 5218 RKRNVWSCQS*IL*STNYTPILSRILRSKQCSLIY**FF*G*QRSTDRFTLIHTNPS*KI 5039 Query: 1619 CCIFFL 1636 CI L Sbjct: 5038 RCILLL 5021 Score = 88.1 bits (186), Expect(2) = 3e-30 Identities = 51/139 (36%), Positives = 73/139 (52%) Frame = -2 / +1 Query: 1310 CECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*S 1131 C FF RLGR+ *Q NR C++F S M C*KTS+ ++*+ V + C+S + Sbjct: 5347 C*WFFRCRLGRISI*QKINRRFCSVFRPKSCIMEC*KTSYSIKV*Y*S*V*SSG*CNSRN 5526 Query: 1130 HMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLG 951 ++G G + S +V* WS + C S+LSC KA+ SFC R+ Sbjct: 5527 YVGTDFVARTGSRIASSSQAMV**SWS*VSFC*SNLSCSYKAYRS*LSFCERKGS*KVA* 5706 Query: 950 HSVYSFKRSSC*WVYKSFT 894 + +Y + RS C W YKS+T Sbjct: 5707 NCIYIY*RSGCRWFYKSYT 5763 Score = 65.2 bits (136), Expect(2) = 3e-30 Identities = 38/100 (38%), Positives = 52/100 (52%) Frame = -2 / +1 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 SR++C W +*T +S + RKTIS N SG Y + C +VF+ K Sbjct: 5020 SREVCIGSSTTGWYV*V*TGQYSSVNLRKTISK*GNIAWTSGFYSV*ECSWCFTVFNFDK 5199 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWS 1338 T + K GV V TC+N++SL SC+ KIC Y+ Y S Sbjct: 5200 TRHFFFDK*GVSVLTCSNYNSLGSCKKDLKIC*IYS*YGS 5319 Score = 119 bits (255), Expect = 5e-26 Identities = 92/228 (40%), Positives = 114/228 (50%) Frame = -1 / +3 Query: 1656 RMHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLF 1477 RM +K++M + + L VN LL QKNY +EH LL+ V VL+ Sbjct: 5001 RMVSCLVKRSMHRIFYDGLVCMSVNRSVLLCQPQKNYQ*MREHCLDLRILLSIGV*LVLY 5180 Query: 1476 SI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLF 1297 SI* QD * RCVS YM Q Q QL *DM NI+ I V S L L V+F Sbjct: 5181 SI*L*QDQTFLFR*IRCVSSYMLQLQLIGQL*KGS*DMLNIQLIRVLSSVGIPLCLLVVF 5360 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 +Q GQD MT+ QQ LQ F I +HG+LENK + L + + M Q K G Sbjct: 5361 QMQIGQDLHMTEDQQEVLQCF*AQILYHGVLENKLQYQGLVLKLSIKLWLMQQQKLCGYR 5540 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 C ++W * L P GV +LE L I SFML QS + FIL E+ Sbjct: 5541 LCCKNWE*NRLEQPSYGVIILELSIFLLIQSFMLVQSI*KLTFIL*EK 5684 Score = 72.5 bits (152), Expect(2) = 1e-13 Identities = 42/97 (43%), Positives = 56/97 (57%) Frame = +1 / -3 Query: 1195 LVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILL 1374 LVF* +M D K LQ LL CH+ ILP+L+ K H Q + + D Y Y+ HIL Sbjct: 5462 LVF*HSMIQDLGLKTLQNLLLIFCHMEILPNLHLKNH*QAERDSYRT*DPYQLYI*HILR 5283 Query: 1375 YAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 QL +EL L HV+T+TP L +++ VL NT +H Sbjct: 5282 SFLQLPNEL*LEHVRTDTPYLSKKKCLVLSKLNTVKH 5172 Score = 31.8 bits (63), Expect(2) = 1e-13 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 L+QNE+ AL+ HERLD Q LQ HT Sbjct: 5681 LSQNESQLLYALYEHERLD*QKDT*LQDYHT 5589
>LOC_Os09g20250:12009.t01759:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4324 Score = 443 bits (962), Expect = e-123 Identities = 184/277 (66%), Positives = 224/277 (80%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + LSQEKYATDL+KK G+ CKP TP+S +EKLSL EG+ + D T+YR +VGAL Sbjct: 3488 QNGIVLSQEKYATDLLKKVGMSDCKPACTPMSVSEKLSLHEGSLLGPDDATQYRSIVGAL 3667 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAP TVH+ A KRI+RY+K +G+ F KS STLVS F Sbjct: 3668 QYLTLTRPDIAFSVNKVCQFLHAPHTVHWIAVKRILRYLKQCAQLGIEFHKSGSTLVSGF 3847 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAG LDDRRSTGGFAIF G NL+SWSARKQATVSRSS E+ YKA+ANATAE++WVQ Sbjct: 3848 SDADWAGSLDDRRSTGGFAIFLGSNLVSWSARKQATVSRSSTESEYKAIANATAEIMWVQ 4027 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L ELGIKS + WCDN+GA Y+SAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4028 TLLAELGIKSPRAAKIWCDNLGAKYMSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 4207 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 4208 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 4318 Score = 272 bits (588), Expect = 6e-72 Identities = 144/244 (59%), Positives = 159/244 (65%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S +S+S TLS TK* S S+CFVLA* T AD Y+AP LSH L Sbjct: 4239 VKPSAT*SLVETKSISRSF*LTLSLTK**STSICFVLA*NTGFADIYLAPRLSHHIFAAL 4060 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L IPNS S CTHM SAVAFA ALY S+LDLETVACFLA E R PKNIA PPV+ L Sbjct: 4059 GLLIPNSASKVCTHMISAVAFAIALYSDSVLDLETVACFLALQETRFDPKNIAKPPVDLL 3880 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SSR PAQS E LT V+ DL P + CF YL I A++ TV GACKN* TL T K Sbjct: 3879 SSRLPAQSASENPLTRVDPDL*NSIPS*AHCFKYLRILFTAIQCTV*GACKN*QTLLTEK 3700 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 ISGLV VKY +APT LY V S+ PS R+SFS+ D GV GLQ P F +KSVA Sbjct: 3699 AISGLVRVKYCKAPTILLY*VASSGPNKEPS*RESFSLTDIGVHAGLQSDIPTFLSKSVA 3520 Query: 1626 YFS* 1637 YFS* Sbjct: 3519 YFS* 3508 Score = 111 bits (236), Expect(2) = 1e-24 Identities = 66/166 (39%), Positives = 88/166 (53%) Frame = +2 / -1 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S Y+V+I E+ + + I NLI NK N+ +F+ S+K+ + Sbjct: 4324 LTNTLSQS*PYKVKIALEILQKSYRQWLSETICNLIVS*NKINL*KFLTYPFSNKVIVNF 4145 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 + CS MK I + S IVTP R F + GL+P+DF IC + L R Sbjct: 4144 YMFCSGMKHWIC*HIFSSKIVTPYFCGPRTFNS*FCK*GLYPHDFCSSICNSFILRLCTR 3965 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCR 1318 SGN L S P N+I +KYCK +C* SVI A+ PV IRK T+K R Sbjct: 3964 SGNCSLLSGTPGNQI*PQKYCKASC*PSVIQATSPVCIRKPTNKSR 3827 Score = 23.5 bits (45), Expect(2) = 1e-24 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +1 / -3 Query: 1411 HVKTNTPCLQQRRYQVL*VSNTEEH 1485 HVK + C Q+++YQ * N +H Sbjct: 3734 HVKIDRLC*QRKQYQA**ELNIAKH 3660 Score = 93.2 bits (197), Expect(2) = 2e-22 Identities = 46/121 (38%), Positives = 68/121 (56%) Frame = -2 / +1 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C ++F+++ *Y C Q + +FTC++H +L S + S I + W+ + Y+C Sbjct: 3661 CFAIFNSH*A*YCFLC*QSLSIFTCSSHCTLDSSKKNS*ILKAMCSAWN*VS*IRIYSC* 3840 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 F* RLG P *Q NR +CNIF S F+ C K S+ FQI*+R V KC+ +H+ Sbjct: 3841 WVF*CRLGW*PG*QKVNRRLCNIFGVKSGFLECQKASYSFQI*YRV*V*SYCKCYCRNHV 4020 Query: 1124 G 1122 G Sbjct: 4021 G 4023 Score = 33.6 bits (67), Expect(2) = 2e-22 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = -2 / +1 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRE 972 +V*Q WS I V +SS+SC NK + S C R+ Sbjct: 4075 MV*QSWS*IYVSKSSVSCQNKTYRS*LSLC*RK 4173 Score = 66.6 bits (139), Expect = 5e-10 Identities = 47/115 (40%), Positives = 59/115 (51%) Frame = -1 / +3 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L V FL+QTG A MT+ QQ LQYF I F G+ E+K FPDL + QM Sbjct: 3828 LLLLVGFLMQTGLVAWMTEGQQEALQYFWGQIWFPGVPESKLQFPDLVQSLSIKLLQMLL 4007 Query: 1137 LKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 KS G P ++ K L GVT+LE + C I FM EQ+ + L E+ Sbjct: 4008 QKSCGYKPYLQN*ELKVLGPQKYGVTILELNICQQIQCFMPEQNI*KLTITLLEK 4172 Score = 43.2 bits (88), Expect = 0.005 Identities = 23/45 (51%), Positives = 26/45 (57%) Frame = +1 / -3 Query: 1177 *IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 *IWK L F + K D KILQ+ LL CH G PSL+ K H Q Sbjct: 3968 *IWKL*LAFWHSRKPDLTPKILQSLLLTFCHPGYQPSLHQKTH*Q 3834
>LOC_Os05g42448:12005.t03785:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4863 Score = 443 bits (962), Expect = e-123 Identities = 181/267 (67%), Positives = 222/267 (83%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q KYA D + K G++ CK TPL+ TEKL +G P+ + D+T+YR +VG LQYLTL Sbjct: 4063 LNQAKYALDFLTKVGMKDCKSASTPLAVTEKLMAHKGNPLGTEDSTQYRSIVGGLQYLTL 4242 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD++FAVNKVC +LHAPT+ H+ A KRI+RY+K T+++GL+F +S STLVSAFS++DW Sbjct: 4243 TRPDLAFAVNKVCQYLHAPTSEHWLAVKRILRYIKGTVDVGLHFKRSSSTLVSAFSDADW 4422 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGF I+FGPN++SWSARKQ TV RSS EA YKA+ANATAE+IWVQS+L+E Sbjct: 4423 AGSLDDRRSTGGFVIYFGPNIVSWSARKQPTVFRSSTEAEYKAMANATAELIWVQSVLEE 4602 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LG+K ++ P WCDN+GATYLS+N VFHARTKHIEID+HFV ERVANK+LDIRFI SKDQ Sbjct: 4603 LGVKIAQPPVLWCDNLGATYLSSNPVFHARTKHIEIDYHFVRERVANKMLDIRFIGSKDQ 4782 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 +ADGFTKAL QS F +NLNL KL* Sbjct: 4783 IADGFTKALSIQSLRYFMYNLNLSKL* 4863 Score = 269 bits (582), Expect = 4e-71 Identities = 144/249 (57%), Positives = 162/249 (65%) Frame = +3 / -2 Query: 891 VRKAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQ 1070 + KAFVNPSA *SF+ IN +S LFATLS TK* SISMCFV A*KT DKYVAP LSH Sbjct: 4814 IDKAFVNPSAI*SFDPINLISSILFATLSLTK**SISMCFVRA*KTGFEDKYVAPKLSHH 4635 Query: 1071 KQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANP 1250 G +F PNS D T + SAVA A ALY AS+LDL TV CFLA H+ LGPK I P Sbjct: 4634 NTGG*AIFTPNSSRTD*TQINSAVALAIALYSASVLDLNTVGCFLALHDTILGPK*ITKP 4455 Query: 1251 PVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HT 1430 PV+ LSSR PAQS EKALT VE DLLK +P +V YL+IR A + + VGA + *HT Sbjct: 4454 PVDLLSSRLPAQSASEKALTRVELDLLKCKPTSTVPLIYLSIRFTANQCSEVGA*RY*HT 4275 Query: 1431 LFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFF 1610 L TAK SGLVSVKY PT LY V+S+ G P +FSV GV LQ P Sbjct: 4274 LLTAKAKSGLVSVKYCSPPTILLY*VLSSVPRGFPLCAINFSVTASGVEADLQSFIPTLV 4095 Query: 1611 TKSVAYFS* 1637 KS AYF+* Sbjct: 4094 RKSKAYFA* 4068 Score = 157 bits (337), Expect = 2e-37 Identities = 87/251 (34%), Positives = 137/251 (54%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 S K+C L +W RL H+ R+ R + + G + +Q R +++ +T++ Sbjct: 4068 SSKVCLGLSN*SWYERLQISFHAASCDREVDGTQRKSSWY*G*HSVQEYCRRTTILNTHQ 4247 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T + CC G+ + +C+ +L C+ Y++I + W +V FY+ +C F* LG Sbjct: 4248 TGFGFCC**GMSISSCSYFRTLVGCETYTEIYQRNC*CWFAL*EV*FYSSQCLF*C*LGW 4427 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVG 1098 R*Q CN+ WT* M C*+T++ +*+R R+ +C+ * ++G++ + +G Sbjct: 4428 *SR*QKVYWRFCNLLWT*YCVMEC*ETTNSV*V*YRSRI*SYGQCYC*VNLGSVSS*RIG 4607 Query: 1097 YKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC 918 K + +V*Q S+I V +SSLSC NKAH*D S C R+S K* + VY KRS+ Sbjct: 4608 SKDCSTTCVMV*QFRSNIFVLKSSLSCTNKAH*D*LSLCKRKSSK*DA*Y*VYWIKRSNS 4787 Query: 917 *WVYKSFTYTK 885 WVYK F YT+ Sbjct: 4788 RWVYKGFVYTE 4820 Score = 143 bits (306), Expect = 4e-33 Identities = 82/180 (45%), Positives = 101/180 (56%) Frame = +2 / -1 Query: 848 LYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD 1027 L QV+I+ E+ KTL S CKPI LIF* NKPN++ IC S S+K+ I LNVLCS MKD Sbjct: 4857 LGQVKIVHEISKTLYRQSLCKPIGYLIF*SNKPNIKHLICYSFSYKVIINLNVLCSCMKD 4678 Query: 1028 *IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 I Q+C S IVTP L Y+Q + L+P S I + C R + LF S Sbjct: 4677 WI*GQICCS*IVTP*HRWLSNLYSQFFKN*LNPN*LSSSIGHSFIFCFGTRPKHCWLFPS 4498 Query: 1208 RP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGS 1387 P*+ IRSK K + SVI* + P+ IRK T R ++ TNI F IS YT S Sbjct: 4497 TP*HNIRSKVNYKTSSRPSVI*TTSPISIRKGTD*SRTRPLKVQTNINSSFDISQYTFHS 4318 Score = 91.8 bits (194), Expect = 1e-17 Identities = 62/150 (41%), Positives = 79/150 (52%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V FL+ G *MT+ L + LDLI HG+L N L +Q + M L + Sbjct: 4400 VPFLMLIGLVV*MTEGLLEVL*FTLDLILCHGVLGNNQQCLGLVPKQNIKLWPMLLLS*F 4579 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G + ++W *+ L GVT+ E H C I SFM EQSTLR I L E+E QI Sbjct: 4580 GFSQFLKNWE*RLLNHLCYGVTI*EQHICPQIQSFMHEQSTLRLIITL*EKE*QIRCLIL 4759 Query: 945 GLFIQKIKLLMGLQKLYVHKVLKTSNIIST 856 GL QKIK MGLQ+L +++VL S I T Sbjct: 4760 GLLDQKIK*PMGLQRLCLYRVLDISCTILT 4849 Score = 73.9 bits (155), Expect(2) = 2e-14 Identities = 39/74 (52%), Positives = 50/74 (67%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T +S*D *++ + V K L*TH+ DLL +*T YL L L Q++N SQCALF HER Sbjct: 4858 TWTS*DCT*NI*DSV*TKPL*THRLFDLLIQ*T*YQASYLLLFLLQSDNQSQCALFVHER 4679 Query: 1027 LDWQTSMWLQHCHT 1068 LD +T+M L +CHT Sbjct: 4678 LDLRTNMLLLNCHT 4637 Score = 32.2 bits (64), Expect(2) = 2e-14 Identities = 29/91 (31%), Positives = 44/91 (48%) Frame = +1 / -3 Query: 1195 LVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILL 1374 +V * +M *VQ LQ CHL P+ + K+H * T *+ +Q+ ++ +I + Sbjct: 4510 VVS*HSMTQY*VQSKLQNLQ*TFCHLDYQPNQHQKRH*LE*N*TS*SANQHQQFL*YISV 4331 Query: 1375 YAWQL*SELWLVHVKTNTPCLQQRRYQVL*V 1467 Y Q + L H + P QQ+ V *V Sbjct: 4330 YVSQPTNVLK*EHEDIDIPY*QQKPNPVW*V 4238
>LOC_Os12g30600:12012.t02767:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 7533 Score = 441 bits (957), Expect = e-123 Identities = 184/277 (66%), Positives = 223/277 (80%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 5797 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 5976 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 5977 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 6156 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFAIF G NL+SW+ARKQATVSRSSIE+ YKA+ANATAE++WVQ Sbjct: 6157 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQ 6336 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L EL IKS K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 6337 TLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 6516 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 6517 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 6627 Score = 230 bits (497), Expect(2) = 7e-67 Identities = 116/198 (58%), Positives = 130/198 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S +S+S T S TK* S SMCFVLA* T LADKY+AP LSH Sbjct: 6557 RGLVNPSAT*SLVETKSISRSF*LTRSLTK**STSMCFVLA*NTGLADKYLAPRLSHHIL 6378 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L I NS S CTH+ SAVA A ALY SMLDL+TVACFLA E R P+NIANPPV Sbjct: 6377 AAFGLLISNSASKVCTHIISAVALAIALYSDSMLDLDTVACFLAFQETRFEPRNIANPPV 6198 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LT V+ DL P CF YL I A++ TVVGACKN TL Sbjct: 6197 DLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQCTVVGACKNWQTLL 6018 Query: 1437 TAKEISGLVSVKY*RAPT 1490 T K +SGLV VKY +APT Sbjct: 6017 TEKAMSGLVRVKYCKAPT 5964 Score = 45.5 bits (93), Expect(2) = 7e-67 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 5921 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 5817 Score = 111 bits (238), Expect = 1e-23 Identities = 69/162 (42%), Positives = 90/162 (55%) Frame = +2 / -1 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S QV+I FE+ + F + I NLI NK N +F+ S K+ + Sbjct: 6633 LTNTLSQSGPNQVQIAFEILQESY*QRFSESICNLIISGNKINF*KFLTYPFSDKVIVNF 6454 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 V S MK I Q+ S I+TP S F L LHP+ F GI V L AR Sbjct: 6453 YVFRSGMKHWIS*QILSSKIITPYFSSFWTFNL*LCK*SLHPHYFCSGIGNSFVF*LYAR 6274 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKST 1306 S +SGLFSS P ++I ++KYCK +C*+SVI* +CPV IR++T Sbjct: 6273 SRHSGLFSSIPGDQI*TQKYCKSSC*SSVI*TACPVCIREAT 6148 Score = 68.0 bits (142), Expect(2) = 2e-13 Identities = 33/69 (47%), Positives = 42/69 (60%) Frame = -2 / +3 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V Y + * RLGR+ R*Q NR +CNI S + C*KTSHC I*HR R+Q + Sbjct: 6129 VRIYFSQWLL*CRLGRLFR*QKINRRICNISGFKSGLLEC*KTSHCV*I*HRVRIQSYCQ 6308 Query: 1145 CHS*SHMGA 1119 CH +++GA Sbjct: 6309 CHCRNNVGA 6335 Score = 28.6 bits (56), Expect(2) = 2e-13 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 +V* WS + V SS+SC N+ H S C R Sbjct: 6384 MV**SWS*VFVS*SSVSCQNETHRS*LSLCQR 6479 Score = 70.3 bits (147), Expect = 4e-11 Identities = 46/101 (45%), Positives = 55/101 (54%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTGQ *MT+ QQ LQYF I G+LENKPL DLA Q T+ MP K Sbjct: 6149 VASLMQTGQAV*MTEDQQEDLQYFWVQIWSPGMLENKPLCLDLA*SQNTKLLPMPLQK*C 6328 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQST 1003 GC +S K +L GV +LE C I FM E++T Sbjct: 6329 GCRLYLQS*RLKVQKLLKYGVIILELSICQLIQCFMPERNT 6451 Score = 55.1 bits (114), Expect = 1e-06 Identities = 29/62 (46%), Positives = 34/62 (54%) Frame = +1 / -3 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP WH C L C*I QWLVF* + + D +ILQ LL CHL LPSL+ + Sbjct: 6334 APTLFLQWHWQ*LCILTLC*I*TQWLVF*HSRRPDLNPEILQILLLIFCHLNSLPSLHQR 6155 Query: 1300 KH 1305 H Sbjct: 6154 SH 6149
>LOC_Os12g26180:12012.t02334:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4383 Score = 439 bits (952), Expect = e-122 Identities = 183/277 (66%), Positives = 222/277 (80%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 3547 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 3726 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 3727 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 3906 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFAIF G NL+SW+ARKQATVSRSS E+ YKA+ANATAE++WVQ Sbjct: 3907 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQ 4086 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L EL IKS K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4087 TLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 4266 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 4267 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 4377 Score = 228 bits (493), Expect(2) = 2e-66 Identities = 115/198 (58%), Positives = 130/198 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S +S+S T S TK* S SMCFVLA* T LADKY+AP LSH Sbjct: 4307 RGLVNPSAT*SLVETKSISRSF*LTRSLTK**STSMCFVLA*NTGLADKYLAPRLSHHIL 4128 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L I NS S CTH+ SAVA A ALY S+LDL+TVACFLA E R P+NIANPPV Sbjct: 4127 AAFGLLISNSASKVCTHIISAVALAIALYSDSVLDLDTVACFLAFQETRFEPRNIANPPV 3948 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LT V+ DL P CF YL I A++ TVVGACKN TL Sbjct: 3947 DLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQCTVVGACKNWQTLL 3768 Query: 1437 TAKEISGLVSVKY*RAPT 1490 T K +SGLV VKY +APT Sbjct: 3767 TEKAMSGLVRVKYCKAPT 3714 Score = 45.5 bits (93), Expect(2) = 2e-66 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 3671 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 3567 Score = 111 bits (238), Expect = 1e-23 Identities = 68/163 (41%), Positives = 91/163 (55%) Frame = +2 / -1 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S QV+I FE+ + F + I NLI NK N +F+ S K+ + Sbjct: 4383 LTNTLSQSGPNQVQIAFEILQESY*QRFSESICNLIISGNKINF*KFLTYPFSDKVIVNF 4204 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 V S MK I Q+ S I+TP S F L LHP+ F GI V L AR Sbjct: 4203 YVFRSGMKHWIS*QILSSKIITPYFSSFWTFNL*LCK*SLHPHYFCSGIGNSFVF*LCAR 4024 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 S +SGLFSS P ++I ++KYCK +C*+S+I* +CPV IR++T+ Sbjct: 4023 SRHSGLFSSIPGDQI*TQKYCKSSC*SSII*TACPVCIREATN 3895 Score = 61.6 bits (128), Expect(2) = 2e-11 Identities = 29/57 (50%), Positives = 37/57 (64%) Frame = -2 / +3 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 RLGR+ R* NR +CNI S + C*KTSHC I*HR R+Q +CH +++GA Sbjct: 3915 RLGRLFR**KINRRICNISGFKSGLLEC*KTSHCV*I*HRVRIQSYCQCHCRNNVGA 4085 Score = 28.6 bits (56), Expect(2) = 2e-11 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 +V* WS + V SS+SC N+ H S C R Sbjct: 4134 MV**SWS*VFVS*SSVSCQNETHRS*LSLCQR 4229 Score = 69.3 bits (145), Expect = 7e-11 Identities = 45/101 (44%), Positives = 54/101 (53%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTGQ *M + QQ LQYF I G+LENKPL DLA Q T+ MP K Sbjct: 3899 VASLMQTGQAV*MIEDQQEDLQYFWVQIWSPGMLENKPLCLDLAQSQNTKLLPMPLQK*C 4078 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQST 1003 GC +S K +L GV +LE C I FM E++T Sbjct: 4079 GCRLYLQS*RLKVQKLLKYGVIILELSICQLIQCFMPERNT 4201 Score = 50.1 bits (103), Expect = 4e-05 Identities = 28/62 (45%), Positives = 33/62 (53%) Frame = +1 / -3 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP WH C L C*I QWLVF* + + D +ILQ LL HL LPSL+ + Sbjct: 4084 APTLFLQWHWQ*LCILTLC*I*TQWLVF*HSRRPDLNPEILQILLLIFYHLNSLPSLHQR 3905 Query: 1300 KH 1305 H Sbjct: 3904 SH 3899
>LOC_Os02g16080:12002.t01401:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 5485 Score = 439 bits (952), Expect = e-122 Identities = 183/277 (66%), Positives = 222/277 (80%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 4134 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 4313 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 4314 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 4493 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFAIF G NL+SW+ARKQATVSRSS E+ YKA+ANATAE++WVQ Sbjct: 4494 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQ 4673 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L EL IKS K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4674 TLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 4853 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 4854 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 4964 Score = 228 bits (493), Expect(2) = 2e-66 Identities = 115/198 (58%), Positives = 130/198 (65%) Frame = +3 / -1 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S +S+S T S TK* S SMCFVLA* T LADKY+AP LSH Sbjct: 4894 RGLVNPSAT*SLVETKSISRSF*LTRSLTK**STSMCFVLA*NTGLADKYLAPRLSHHIL 4715 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L I NS S CTH+ SAVA A ALY S+LDL+TVACFLA E R P+NIANPPV Sbjct: 4714 AAFGLLISNSASKVCTHIISAVALAIALYSDSVLDLDTVACFLAFQETRFEPRNIANPPV 4535 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LT V+ DL P CF YL I A++ TVVGACKN TL Sbjct: 4534 DLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQCTVVGACKNWQTLL 4355 Query: 1437 TAKEISGLVSVKY*RAPT 1490 T K +SGLV VKY +APT Sbjct: 4354 TEKAMSGLVRVKYCKAPT 4301 Score = 45.5 bits (93), Expect(2) = 2e-66 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -1 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 4258 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 4154 Score = 112 bits (239), Expect = 8e-24 Identities = 69/163 (42%), Positives = 91/163 (55%) Frame = +2 / -3 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S QV+I FE+ + F + I NLI NK N +F+ S K+ + Sbjct: 4970 LTNTLSQSGPNQVQIAFEILQESY*QRFSESICNLIISGNKINF*KFLTYPFSDKVIVNF 4791 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 V S MK I Q+ S I+TP S F L LHP+ F GI V L AR Sbjct: 4790 YVFRSGMKHWIS*QILSSKIITPYFSSFWTFNL*LCK*SLHPHYFCSGIGNSFVF*LCAR 4611 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 S +SGLFSS P ++I ++KYCK +C*+SVI* +CPV IR++T+ Sbjct: 4610 SRHSGLFSSIPGDQI*TQKYCKSSC*SSVI*TACPVCIREATN 4482 Score = 65.7 bits (137), Expect(2) = 1e-12 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = -2 / +2 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 RLGR+ R*Q NR +CNI S + C*KTSHC I*HR R+Q +CH +++GA Sbjct: 4502 RLGRLFR*QKINRRICNISGFKSGLLEC*KTSHCV*I*HRVRIQSYCQCHCRNNVGA 4672 Score = 28.6 bits (56), Expect(2) = 1e-12 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 / +2 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 +V* WS + V SS+SC N+ H S C R Sbjct: 4721 MV**SWS*VFVS*SSVSCQNETHRS*LSLCQR 4816 Score = 72.1 bits (151), Expect = 1e-11 Identities = 46/101 (45%), Positives = 55/101 (54%) Frame = -1 / +1 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTGQ *MT+ QQ LQYF I G+LENKPL DLA Q T+ MP K Sbjct: 4486 VASLMQTGQAV*MTEDQQEDLQYFWVQIWSPGMLENKPLCLDLAQSQNTKLLPMPLQK*C 4665 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQST 1003 GC +S K +L GV +LE C I FM E++T Sbjct: 4666 GCRLYLQS*RLKVQKLLKYGVIILELSICQLIQCFMPERNT 4788 Score = 55.1 bits (114), Expect = 1e-06 Identities = 29/62 (46%), Positives = 34/62 (54%) Frame = +1 / -2 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP WH C L C*I QWLVF* + + D +ILQ LL CHL LPSL+ + Sbjct: 4671 APTLFLQWHWQ*LCILTLC*I*TQWLVF*HSRRPDLNPEILQILLLIFCHLNSLPSLHQR 4492 Query: 1300 KH 1305 H Sbjct: 4491 SH 4486
>LOC_Os06g13430:12006.t01218:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4383 Score = 437 bits (949), Expect = e-122 Identities = 182/277 (65%), Positives = 222/277 (80%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 3547 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 3726 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC +LHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 3727 QYLTLTRPDIAFSVNKVCQYLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 3906 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFAIF G NL+SW+ARKQATVSRSS E+ YKA+ANATAE++WVQ Sbjct: 3907 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQ 4086 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L EL IKS K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4087 TLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFV 4266 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 4267 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 4377 Score = 225 bits (485), Expect(2) = 3e-65 Identities = 114/198 (57%), Positives = 129/198 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S +S+S T S TK* S SMCFVLA* T LADKY+AP LSH Sbjct: 4307 RGLVNPSAT*SLVETKSISRSF*LTRSLTK**STSMCFVLA*NTGLADKYLAPRLSHHIL 4128 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L I NS S CTH+ SAVA A ALY S+LDL+TVACFLA E R P+NIANPPV Sbjct: 4127 AAFGLLISNSASKVCTHIISAVALAIALYSDSVLDLDTVACFLAFQETRFEPRNIANPPV 3948 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LT V+ DL P CF YL I A++ TVVGACK TL Sbjct: 3947 DLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQCTVVGACKYWQTLL 3768 Query: 1437 TAKEISGLVSVKY*RAPT 1490 T K +SGLV VKY +APT Sbjct: 3767 TEKAMSGLVRVKYCKAPT 3714 Score = 45.5 bits (93), Expect(2) = 3e-65 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 3671 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 3567 Score = 112 bits (239), Expect = 8e-24 Identities = 69/163 (42%), Positives = 91/163 (55%) Frame = +2 / -1 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S QV+I FE+ + F + I NLI NK N +F+ S K+ + Sbjct: 4383 LTNTLSQSGPNQVQIAFEILQESY*QRFSESICNLIISGNKINF*KFLTYPFSDKVIVNF 4204 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 V S MK I Q+ S I+TP S F L LHP+ F GI V L AR Sbjct: 4203 YVFRSGMKHWIS*QILSSKIITPYFSSFWTFNL*LCK*SLHPHYFCSGIGNSFVF*LCAR 4024 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 S +SGLFSS P ++I ++KYCK +C*+SVI* +CPV IR++T+ Sbjct: 4023 SRHSGLFSSIPGDQI*TQKYCKSSC*SSVI*TACPVCIREATN 3895 Score = 65.7 bits (137), Expect(2) = 1e-12 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = -2 / +3 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 RLGR+ R*Q NR +CNI S + C*KTSHC I*HR R+Q +CH +++GA Sbjct: 3915 RLGRLFR*QKINRRICNISGFKSGLLEC*KTSHCV*I*HRVRIQSYCQCHCRNNVGA 4085 Score = 28.6 bits (56), Expect(2) = 1e-12 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 +V* WS + V SS+SC N+ H S C R Sbjct: 4134 MV**SWS*VFVS*SSVSCQNETHRS*LSLCQR 4229 Score = 72.1 bits (151), Expect = 1e-11 Identities = 46/101 (45%), Positives = 55/101 (54%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTGQ *MT+ QQ LQYF I G+LENKPL DLA Q T+ MP K Sbjct: 3899 VASLMQTGQAV*MTEDQQEDLQYFWVQIWSPGMLENKPLCLDLAQSQNTKLLPMPLQK*C 4078 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQST 1003 GC +S K +L GV +LE C I FM E++T Sbjct: 4079 GCRLYLQS*RLKVQKLLKYGVIILELSICQLIQCFMPERNT 4201 Score = 55.1 bits (114), Expect = 1e-06 Identities = 29/62 (46%), Positives = 34/62 (54%) Frame = +1 / -3 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP WH C L C*I QWLVF* + + D +ILQ LL CHL LPSL+ + Sbjct: 4084 APTLFLQWHWQ*LCILTLC*I*TQWLVF*HSRRPDLNPEILQILLLIFCHLNSLPSLHQR 3905 Query: 1300 KH 1305 H Sbjct: 3904 SH 3899
>LOC_Os03g20080:12003.t01769:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4439 Score = 437 bits (948), Expect = e-121 Identities = 179/268 (66%), Positives = 222/268 (82%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K+ L LSQEKYA+DL+++ G+ CKP TPLS++EKLS+ EGT + D+T+Y+ +VGAL Sbjct: 3606 KDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYKSVVGAL 3785 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF++NKVC FLHAPTT H+ A KRI+RYVK+T++ GL F ++PS LVS F Sbjct: 3786 QYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGF 3965 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++D AG DDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATAE++WVQ Sbjct: 3966 SDAD*AGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQ 4145 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 +L+ELG++S + WCDN+GA YLSAN +FHARTKHIE+DFHFV ERVA KLL+I +I Sbjct: 4146 ILLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLLEIAYI 4325 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNL 854 +KDQVADGFTKA+ + E FK+N NL Sbjct: 4326 STKDQVADGFTKAIPVRQMEMFKNNFNL 4409 Score = 273 bits (591), Expect = 2e-72 Identities = 140/246 (56%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFV PSAT*S I +S + ATLS TK*KS S+CFV A*K LA++Y+AP LSH Sbjct: 4363 AFVKPSAT*SLVDIYAISSNFLATLSLTK*KSTSICFVRA*KIGLAERYLAPRLSHHSLA 4184 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S + CTH+ SAVA A ALY AS+LDL+TVACFLA H+ R GPKN A PPV+ Sbjct: 4183 ARGDSTPSSCNKICTHIISAVALARALYSASVLDLDTVACFLALHDTRFGPKNTAKPPVD 4004 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS PA S EK LTS EG L RP+ +V TYL I A +* VVGACKN*HTLF Sbjct: 4003 LLSSGDPA*SASEKPLTSREGFLQNLRPVSTVYLTYLKILFTAAQ*VVVGACKN*HTLFI 3824 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 KEISGLV VKY +APT LY V S VPS D+FS +D+GV GL P +S Sbjct: 3823 EKEISGLVKVKYCKAPTTLLY*VES*GPSNVPSFTDNFSEVDRGVLTGLHSYIPTRRRRS 3644 Query: 1620 VAYFS* 1637 AYFS* Sbjct: 3643 DAYFS* 3626 Score = 176 bits (378), Expect = 5e-43 Identities = 100/246 (40%), Positives = 136/246 (55%) Frame = +2 / -1 Query: 899 SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETG 1078 SFCK I NLIF N ++ SHKMK+ +LC+SMKD I R++ S I+TP G Sbjct: 4364 SFCKTICNLIFSRYICNFKQLSSYPFSHKMKVNFYMLCTSMKDWISRKILSSKIITP*LG 4185 Query: 1079 SLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC* 1258 R FY+Q L L+P++F C I + R LFSS P* +I + K+CK +C* Sbjct: 4184 CSRRFYSQFLQQNLYPHNFCCCISQSFILSFSTRP*YCSLFSSTP*YKIWA*KHCKTSC* 4005 Query: 1259 TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVY 1438 +SVI SC + I K+T+K R E+ T I +F+IS SC ++C W M*+LTHL+Y Sbjct: 4004 SSVIWRSCLICI*KTTNKQRGIPTELKTCINCIFNIS*DPFYSCPMSCSWSM*ELTHLIY 3825 Query: 1439 SKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQV 1618 K +I SC+ IL ST T + S + +CS *FF RS FT + ++ Sbjct: 3824 RKRNIWSCQS*IL*STNYTLILSRILRSKQCSLIY**FF*G*QRSTDRFTLIHTNPS*KI 3645 Query: 1619 CCIFFL 1636 CI L Sbjct: 3644 RCILLL 3627 Score = 91.8 bits (194), Expect(2) = 5e-31 Identities = 52/139 (37%), Positives = 74/139 (53%) Frame = -2 / +2 Query: 1310 CECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*S 1131 C FF RLGR+ R*Q NR C++F S M C*KTS+ ++*+ V + C+S + Sbjct: 3953 C*WFFRCRLGRISR*QKINRRFCSVFRPKSCIMEC*KTSYSIKV*Y*S*V*SSG*CNSRN 4132 Query: 1130 HMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLG 951 ++G G + S +V* WS + C S+LSC KA+ SFC R+ Sbjct: 4133 YVGTDFVARTGSRIASSSQAMV**SWS*VSFC*SNLSCSYKAYRS*LSFCERKGS*KVA* 4312 Query: 950 HSVYSFKRSSC*WVYKSFT 894 + +Y + RS C W YKS+T Sbjct: 4313 NCIYIY*RSGCRWFYKSYT 4369 Score = 64.3 bits (134), Expect(2) = 5e-31 Identities = 38/100 (38%), Positives = 51/100 (51%) Frame = -2 / +2 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 SR++C W +*T +S + RK IS N SG Y + C +VF+ K Sbjct: 3626 SREVCIGSSTTGWYV*V*TGQYSSVNLRKIISK*GNIAWTSGFYSV*ECSWCFTVFNFDK 3805 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWS 1338 T Y K GV V TC+N++SL SC+ KIC Y+ Y S Sbjct: 3806 TRYFFFDK*GVSVLTCSNYNSLGSCKKDLKIC*IYS*YRS 3925 Score = 117 bits (250), Expect = 2e-25 Identities = 92/228 (40%), Positives = 114/228 (50%) Frame = -1 / +1 Query: 1656 RMHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLF 1477 RM +K++M + + L VN LL QKNY +EH LL+ V VL+ Sbjct: 3607 RMVSCLVKRSMHRIFYDGLVCMSVNRSVLLCQPQKNYQ*MREHCLDLRILLSIRV*LVLY 3786 Query: 1476 SI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLF 1297 SI* QD I * RCVS YM Q Q QL *DM NI+ I V S L L V+F Sbjct: 3787 SI*L*QDQIFLFR*IRCVSSYMLQLQLIGQL*KGS*DMLNIQLIQVLSSVGIPLCLLVVF 3966 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 +Q QD MT+ QQ LQ F I +HG+LENK + L + + M Q K G Sbjct: 3967 QMQIRQDLQMTEDQQEVLQCF*AQILYHGVLENKLQYQGLVLKLSIKLWLMQQQKLCGYR 4146 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 C ++W * L P GV +LE L I SFML QS + FIL E+ Sbjct: 4147 FCCKNWE*NRLEQPSYGVIILELSIFLLIQSFMLVQSI*KLTFIL*EK 4290 Score = 77.1 bits (162), Expect(2) = 3e-15 Identities = 44/97 (45%), Positives = 57/97 (58%) Frame = +1 / -3 Query: 1195 LVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILL 1374 LVF* +M D K LQ LL CHL ILP+L+ K H Q + + D Y Y+ HIL Sbjct: 4068 LVF*HSMIQDLGLKTLQNLLLIFCHLEILPNLHLKNH*QAERDSYRT*DLYQLYI*HILR 3889 Query: 1375 YAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 QL +EL L HV+T+TP L +++Y VL NT +H Sbjct: 3888 SFLQLPNEL*LEHVRTDTPYLSKKKYLVLSKLNTVKH 3778 Score = 31.8 bits (63), Expect(2) = 3e-15 Identities = 16/31 (51%), Positives = 19/31 (61%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 L+QNE+ AL+ HERLD Q LQ HT Sbjct: 4287 LSQNESQLLYALYEHERLD*QKDT*LQDYHT 4195
>LOC_Os03g64080:12003.t05622:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 15359 Score = 437 bits (948), Expect = e-121 Identities = 182/267 (68%), Positives = 216/267 (80%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L QEKYA+DL+K+ + CKP TPLS +EKLS GT + D T+YR +VGALQYLTL Sbjct: 14559 LKQEKYASDLLKRASMLDCKPVSTPLSVSEKLSAHSGTALGETDATRYRSIVGALQYLTL 14738 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISFAVNKVC FLH+PT H+ A KRI+RYVK ++++GL S+S STLVSAF ++DW Sbjct: 14739 TRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGLKISRSSSTLVSAFLDADW 14918 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGFA+F G NL+SWSARKQATVSRSS EA YKA+ANATAEV+WVQ++LKE Sbjct: 14919 AGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWVQALLKE 15098 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI S +T C WCDN+GATYL+ N VFHARTKHIEID+HFV ERVA K L+I+FI S DQ Sbjct: 15099 LGINSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFISSGDQ 15278 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTK L +F++NLNL KL* Sbjct: 15279 VADGFTKPLGAPQLRNFRYNLNLDKL* 15359 Score = 277 bits (600), Expect = 1e-73 Identities = 143/246 (58%), Positives = 164/246 (66%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S E IN +S ATLS TK* SIS+C V A* T L K VAP LSH Sbjct: 15304 RGLVNPSAT*SPEDINLISNCFLATLSLTK**SISICLVRA*NTGLTAK*VAPRLSHHIH 15125 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 V FIP+S S TH+TSAVAFA+ALY AS+LDL+TVACFLA E +L P+N A PPV Sbjct: 15124 AVSGEFIPSSLSRA*THITSAVAFATALYSASVLDLDTVACFLALQETKLDPRNTAKPPV 14945 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS PAQS +KALT V+ + L RP + FTYL I A++*++VG CKN* TLF Sbjct: 14944 DLLSSIDPAQSASKKALTRVDDERLILRPRSTENFTYLNILFTAIQ*SIVGLCKN*QTLF 14765 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 TA EISGLV V+Y*RAPT LYLV S VP DSFS D+GV GLQ F K Sbjct: 14764 TANEISGLVKVRY*RAPTILLYLVASVSPRAVPL*ADSFSDTDRGVLTGLQSSILALFNK 14585 Query: 1617 SVAYFS 1634 S AYFS Sbjct: 14584 SEAYFS 14567 Score = 148 bits (317), Expect = 1e-34 Identities = 91/244 (37%), Positives = 130/244 (53%) Frame = -2 / +2 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 +RKIC +K+ RL*T +S + RKT+S N R + *IQ SSV D Sbjct: 14564 TRKICL*FVEKSKYARL*TC*YSSVCIRKTVSS*WNCSRRNRCN*IQKYSWSSSVSDFD* 14743 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 *Y +C K G+ VFT +N+ SL + KICE + WS + ++C CFF LGR Sbjct: 14744 A*YFICSK*GLSVFT*SNYRSLDGSEEDIKICEILS*SWS*DKSFIIHSC*CFFRC*LGR 14923 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVG 1098 + *Q N C + * F+ C KT + +I +R +Q KC+ ++G+ Sbjct: 14924 IN**QKINWRFCCVSGV*FGFLECKKTGYSIKIKYRS*IQSCCKCNGRGNVGSGST*RAR 15103 Query: 1097 YKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC 918 K *+ +++V* S++L C S +SC N +*DR SFC RE C+ + + VY F+ SSC Sbjct: 15104 NKFT*NCMYVV**SGSYLLGC*SCVSCTN*TY*DRLSFCQREGCQKAIRNQVYIFR*SSC 15283 Query: 917 *WVY 906 WVY Sbjct: 15284 RWVY 15295 Score = 66.1 bits (138), Expect(4) = 7e-30 Identities = 41/98 (41%), Positives = 51/98 (52%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+ E+ K T F KPI NLI * K + N LS KM +YLN+ S MK I Sbjct: 15344 VKIVSEIPKLWSTERFSKPICNLIT*RYKLDF*LLSGNPLSDKMIVYLNMFSSCMKHRIN 15165 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC 1150 QV S I+TP T S R Y+ L L+P+ IC Sbjct: 15164 SQVSSSQIITPHTCSFR*IYS*LFK*SLNPHYLCRCIC 15051 Score = 52.4 bits (108), Expect(4) = 7e-30 Identities = 28/58 (48%), Positives = 34/58 (58%) Frame = +2 / -1 Query: 1340 TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 T I FHIS Y L + W M*KLT L+Y K +IR + QILKS+ TSV S + Sbjct: 14861 TKIN*EFHIS*YPLHCHPMIYSWTM*KLTDLIYCK*NIRPSQSQILKSSNYTSVSSCI 14688 Score = 42.8 bits (87), Expect(4) = 7e-30 Identities = 21/39 (53%), Positives = 28/39 (71%) Frame = +2 / -1 Query: 1196 LFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHK 1312 LFS P N+IR +K+ K + *+SVI SCP+ I KST+K Sbjct: 15005 LFSCTPGNQIRPQKHSKTSS*SSVIN*SCPISI*KSTNK 14889 Score = 25.8 bits (50), Expect(4) = 7e-30 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 / -3 Query: 1549 VFLY*IKEWVWVYNLVGQAFLPSLLHIFLEKDEVH 1653 VFL +E+ VYNL F + HIFL + H Sbjct: 14652 VFLIQTEEY*QVYNLAYLLFSTNQRHIFLVSVKYH 14548 Score = 72.5 bits (152), Expect(2) = 4e-18 Identities = 59/151 (39%), Positives = 77/151 (50%) Frame = -1 / +1 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 VLF + GQD MT+ Q L F LI F G+ EN+ + D + T+ QM + + Sbjct: 14896 VLF*MLIGQDQLMTEDQLEVLLCFWGLIWFPGVQENRLQYQDQVQKLNTKLLQMQRQR*C 15075 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G +S * L+L V GV + E T L I FM E + LR* IL ER L ++ Sbjct: 15076 GFRLYLKS*E*IHLKLHVCGVIIWELLTWLLILCFMHELNILR*TIILSERGLPESN*KS 15255 Query: 945 GLFIQKIKLLMGLQKLYVHKVLKTSNIIST* 853 L++Q IKL MGL L V L S+ I T* Sbjct: 15256 SLYLQVIKLQMGLLNLSVLHNLGISDTILT* 15348 Score = 40.0 bits (81), Expect(2) = 4e-18 Identities = 35/77 (45%), Positives = 40/77 (51%) Frame = -1 / +1 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 KKNM *K +VN LL L QKN E L* + L+T+V LFSI* Sbjct: 14566 KKNMPLIC*KEQVC*IVNLLVLLCLYQKNCQLIVELL*EKQMQLDTEV*LELFSI*L*LG 14745 Query: 1455 LISPLL*TRCVSFYMHQ 1405 LI L * R VSFY+ Q Sbjct: 14746 LIFHLQ*IRSVSFYIVQ 14796 Score = 38.6 bits (78), Expect(2) = 5e-05 Identities = 31/74 (41%), Positives = 39/74 (52%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D +*+ + ++ *TH QLD L *T + Q SL QN++LSQ F HE Sbjct: 15354 TYLS*DCI*NS*VVEHREV**THLQLDHLKI*T*FLIAFWQPSL*QNDSLSQYV*FVHET 15175 Query: 1027 LDWQTSMWLQHCHT 1068 D Q S L HT Sbjct: 15174 QD*QPSK*LPDYHT 15133 Score = 37.3 bits (75), Expect(2) = 5e-05 Identities = 23/56 (41%), Positives = 32/56 (57%) Frame = +1 / -3 Query: 1339 DQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI* 1506 DQ +SHIL+ + ++L L +VKT+ P L Q +YQ S+TEE CI* Sbjct: 14862 DQDQLRISHILISSSLPSNDL*LDYVKTDRPYLLQMKYQA*SKSDTEELQLYFCI* 14695
>LOC_Os09g38950:12009.t03362:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 5081 Score = 436 bits (947), Expect = e-121 Identities = 182/277 (65%), Positives = 220/277 (79%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 2830 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 3009 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 3010 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 3189 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFAIF G NL+SW+ RKQATVSRSS E+ YKA+ANATAE++WVQ Sbjct: 3190 SDADWAGCLDDRRSTGGFAIFLGSNLVSWNTRKQATVSRSSTESEYKAIANATAEIMWVQ 3369 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L EL IKS K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV KLL+I F+ Sbjct: 3370 TLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVTQKLLEIDFV 3549 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGV 827 + DQVADGFTK L + E+FK NLNL++ LR+GV Sbjct: 3550 STNDQVADGFTKPLSVRLLENFKSNLNLVRSGLREGV 3660 Score = 227 bits (490), Expect(2) = 6e-66 Identities = 114/198 (57%), Positives = 129/198 (65%) Frame = +3 / -1 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S +S+S T S TK* S SMCFVLA* T LADKY+AP LSH Sbjct: 3590 RGLVNPSAT*SLVETKSISRSF*VTRSLTK**STSMCFVLA*NTGLADKYLAPRLSHHIL 3411 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L I NS S CTH+ SAVA A ALY S+LDL+TVACFL E R P+NIANPPV Sbjct: 3410 AAFGLLISNSASKVCTHIISAVALAIALYSDSVLDLDTVACFLVFQETRFEPRNIANPPV 3231 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LT V+ DL P CF YL I A++ TVVGACKN TL Sbjct: 3230 DLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQCTVVGACKNWQTLL 3051 Query: 1437 TAKEISGLVSVKY*RAPT 1490 T K +SGLV VKY +APT Sbjct: 3050 TEKAMSGLVRVKYCKAPT 2997 Score = 45.5 bits (93), Expect(2) = 6e-66 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -1 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 2954 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 2850 Score = 111 bits (238), Expect = 1e-23 Identities = 69/162 (42%), Positives = 90/162 (55%) Frame = +2 / -3 Query: 821 LFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYL 1000 L NTL S QV+I FE+ + F + I NLI NK N +F+ S K+ + Sbjct: 3666 LTNTLSQSGPNQVQIAFEILQESY*QRFSESICNLIISGNKINF*KFLSYPFSDKVIVNF 3487 Query: 1001 NVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDAR 1180 V S MK I Q+ S I+TP S F L LHP+ F GI V L AR Sbjct: 3486 YVFRSGMKHWIS*QILSSKIITPYFSSFWTFNL*LCK*SLHPHYFCSGIGNSFVF*LCAR 3307 Query: 1181 SGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKST 1306 S +SGLFSS P ++I ++KYCK +C*+SVI* +CPV IR++T Sbjct: 3306 SRHSGLFSSIPGDQI*TQKYCKSSC*SSVI*TACPVCIREAT 3181 Score = 62.9 bits (131), Expect(2) = 6e-12 Identities = 32/69 (46%), Positives = 41/69 (59%) Frame = -2 / +3 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V Y + * RLGR+ R*Q NR +CNI S + *KTSHC I*HR R+Q + Sbjct: 3162 VRIYFSQWLL*CRLGRLFR*QKINRRICNISGFKSGLLEY*KTSHCV*I*HRVRIQSYCQ 3341 Query: 1145 CHS*SHMGA 1119 CH +++GA Sbjct: 3342 CHCRNNVGA 3368 Score = 28.6 bits (56), Expect(2) = 6e-12 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 +V* WS + V SS+SC N+ H S C R Sbjct: 3417 MV**SWS*VFVS*SSVSCQNETHRS*LSLCQR 3512 Score = 72.1 bits (151), Expect = 1e-11 Identities = 46/101 (45%), Positives = 55/101 (54%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTGQ *MT+ QQ LQYF I G+LENKPL DLA Q T+ MP K Sbjct: 3182 VASLMQTGQAV*MTEDQQEDLQYFWVQIWSPGILENKPLCLDLAQSQNTKLLPMPLQK*C 3361 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQST 1003 GC +S K +L GV +LE C I FM E++T Sbjct: 3362 GCRLYLQS*RLKVQKLLKYGVIILELSICQLIQCFMPERNT 3484 Score = 54.7 bits (113), Expect = 2e-06 Identities = 29/62 (46%), Positives = 34/62 (54%) Frame = +1 / -2 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP WH C L C*I QWLVF* + + D +ILQ LL CHL LPSL+ + Sbjct: 3367 APTLFLQWHWQ*LCILTLC*I*TQWLVF*YSRRPDLNPEILQILLLIFCHLNSLPSLHQR 3188 Query: 1300 KH 1305 H Sbjct: 3187 SH 3182
>LOC_Os07g39230:12007.t03584:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4325 Score = 436 bits (947), Expect = e-121 Identities = 177/263 (67%), Positives = 215/263 (81%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ + CK TPLS +EKLS EG P+ D+T+YR LVGALQYLTL Sbjct: 3522 LTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTL 3701 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+SF+VNKVC +LHAPTT H+ AAKRI+RY+KHT+ +GL SKS S LVSAFS++DW Sbjct: 3702 TRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADW 3881 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRS EA YKALANATAE++W+Q++L E Sbjct: 3882 AGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSITEAEYKALANATAEIMWIQTLLHE 4061 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI+ K WCDN+GA Y++AN VFHARTKHIE+D+HFV ERVA KLL + +I +KDQ Sbjct: 4062 LGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQ 4241 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 VADGFTK L + E F++NLNL Sbjct: 4242 VADGFTKTLSVRQLEMFRNNLNL 4310 Score = 262 bits (567), Expect = 4e-69 Identities = 137/243 (56%), Positives = 155/243 (63%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S I KS AT S TK* S S+C V A*KT LA Y AP LSH +L Sbjct: 4258 VKPSAT*SLVDIYSTCKSFLATRSRTK**STSICLVRA*KTGLAVIYFAPILSHHTLAIL 4079 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 IP+S S C H+ SAVA A ALY AS++DL+TVAC A + RLGP A PPVER Sbjct: 4078 GT*IPSS*SKVCIHIISAVALAKALYSASVIDLDTVACLRALQDTRLGPIKTAKPPVERR 3899 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS+HPAQS EKALT E DLL F P +VCF YL I LAA + VVGACK HTLFT Sbjct: 3898 SSKHPAQSASEKALTRRELDLLIFSPSLTVCFKYLKILLAAAQCLVVGACKYWHTLFTEN 3719 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 + SGLV VKY APTR LYLV+S+ G+PS +FS +DKGV LQ F S+A Sbjct: 3718 DKSGLVRVKYCNAPTRLLYLVLSSGPRGLPS*ALNFSEIDKGVLTALQSLIFTLFNTSIA 3539 Query: 1626 YFS 1634 YFS Sbjct: 3538 YFS 3530 Score = 138 bits (297), Expect = 8e-32 Identities = 85/227 (37%), Positives = 119/227 (52%) Frame = +2 / -1 Query: 956 EFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDF 1135 +F CN L++K+ IYL++L +SMK+ I + +NI+TP + +Q + GL+P++ Sbjct: 4208 KFSCNPLTNKVIIYLDMLGASMKNRISCHILCTNIITPYLSNFGYLNSQFMK*GLYPHNL 4029 Query: 1136 SCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKC 1315 I L+ C RSG S L + P ++IR K K T +I SCP+ IR+ST+K Sbjct: 4028 CSSISQSLIFCFCNRSGYSSLLTCTPGHKIRPYKNSKTPSRTPIIQTSCPICIRESTYKK 3849 Query: 1316 RRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQT 1495 R LA * + MF IS L + GWCM L HL+Y K I S + QIL+ + QT Sbjct: 3848 RIRLANF*PKLNCMFQISQNPLSRRPMLSGWCMQILAHLIY*K**IWSSQSQILQCSNQT 3669 Query: 1496 SVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 SV +V R +F *FF R RS FT + IF L Sbjct: 3668 SVPGTVFWSKRITFMST*FF*NRQRSIDCFTVTHIHSL*HIHSIFLL 3528 Score = 89.5 bits (189), Expect(2) = 1e-24 Identities = 50/123 (40%), Positives = 68/123 (55%) Frame = -2 / +2 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y +Q SG +VFD+ T +++ K GV VF CTNH +L +I ETY+ W+K Sbjct: 3656 YQVQKSGWSIAVFDSD*TRFIIFSK*GVPVFACTNH*ALGGG*EDFEIFETYS*AWAKN* 3835 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 QV F +C+CF * RLGRM * F C + *S + C S+C QI +R R+ G Sbjct: 3836 QV*FSSCKCFL*CRLGRMFG*SAFYWGFCCFYRA*SCVLECT*ASYCIQIYYRSRI*GFG 4015 Query: 1148 KCH 1140 C+ Sbjct: 4016 *CY 4024 Score = 45.1 bits (92), Expect(2) = 1e-24 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = -2 / +2 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 +V* W + S SC ++A+ R S C CK T +Y ++RSSC*W+++ Sbjct: 4094 MV**YWCKVYDS*SCFSCSHQAYRGRLSLCS*AGCKKTFTSGIYIYQRSSC*WLHQ 4261 Score = 47.8 bits (98), Expect(3) = 1e-14 Identities = 40/106 (37%), Positives = 54/106 (50%) Frame = -1 / +1 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+*NI+ L * AS +L L*VL L+Q GQD M V L + LI G+ +K Sbjct: 3793 *DI*NIQLSLG*KLASLILFL*VLSLMQIGQDVWMIGVLLGVLLFL*GLILCPGVHVSKL 3972 Query: 1191 LFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTML 1054 L+PDL +Q R M + G P +W + +L GV +L Sbjct: 3973 LYPDLLQKQNIRLWLMLLQRLCGYKPYFMNWEFRYPKLLRYGVIIL 4110 Score = 37.3 bits (75), Expect(3) = 1e-14 Identities = 26/57 (45%), Positives = 29/57 (50%) Frame = -1 / +1 Query: 1572 LLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQP 1402 LL L QKN + K L Q T+ T+VW SI* D I * RC S MHQP Sbjct: 3592 LLCLFQKN*VLMKVILLDQKTVPGTEVWLEHCSI*L*LDQIYHFQ*IRCASICMHQP 3762 Score = 32.7 bits (65), Expect(3) = 1e-14 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -1 / +1 Query: 1023 FMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 FML S R*I L LQ N + + +++ KIKLLM Sbjct: 4141 FMLAPSISR*IITLFVSGLQENFYKWNIYLPKIKLLM 4251 Score = 38.6 bits (78), Expect(2) = 5e-06 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = +1 / -3 Query: 1402 WLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CPLNL*VFLP*EIVFLY*IKEWVW 1581 WLVH T TP L + V SNT PD C C L +L ++FL * KE+ Sbjct: 3762 WLVHANTGTPYLLKMINLV*SESNTAMLQPDFCTWYCLLVQEDYLHEHLIFLK*TKEY*L 3583 Query: 1582 VYN 1590 +Y+ Sbjct: 3582 LYS 3574 Score = 32.7 bits (65), Expect(2) = 5e-06 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +1 / -3 Query: 1258 NVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHI 1368 N H ILP+L+ +KH Q TC* L Q YVS+I Sbjct: 3906 NADHPNILPNLHQRKHLQEEN*TC*FLAQA*LYVSNI 3796
>LOC_Os07g16990:12007.t01559:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4335 Score = 436 bits (946), Expect = e-121 Identities = 182/267 (68%), Positives = 215/267 (80%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L QEKYA DL+K+ + CKP TPLS +EKLS GT + D T+YR +VGALQYLTL Sbjct: 3535 LKQEKYAYDLLKRASMLDCKPVSTPLSVSEKLSAHSGTALGETDATRYRSIVGALQYLTL 3714 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISFAVNKVC FLH+PT H+ A KRI+RYVK ++++GL S+S STLVSAFS++DW Sbjct: 3715 TRPDISFAVNKVCQFLHSPTIDHWMAVKRILRYVKFSVDLGLKISRSSSTLVSAFSDADW 3894 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGFA+F G NL+SWSARKQATVSRSS EA YKA+ANATAEV+WVQ++LKE Sbjct: 3895 AGSIDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWVQALLKE 4074 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI S +T C WCDN+GATYL+ N VFHARTKHIEID+HFV ERVA K L+I+FI S DQ Sbjct: 4075 LGIDSPETACMWCDNLGATYLAVNPVFHARTKHIEIDYHFVRERVARKQLEIKFISSGDQ 4254 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 V DGFTK L +F++NLNL KL* Sbjct: 4255 VTDGFTKPLGAPQLRNFRYNLNLDKL* 4335 Score = 270 bits (585), Expect = 1e-71 Identities = 141/246 (57%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPS T*S E IN +S ATLS TK* SIS+C V A* T L K VAP LSH Sbjct: 4280 RGLVNPSVT*SPEDINLISNCFLATLSLTK**SISICLVRA*NTGLTAK*VAPRLSHHIH 4101 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 V IP+S S TH+TSAVAFA+ALY AS+LDL+TVACFLA E + P+N A PPV Sbjct: 4100 AVSGESIPSSLSRA*THITSAVAFATALYSASVLDLDTVACFLALQETKFDPRNTAKPPV 3921 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS PAQS EKALT V+ + L RP + FTYL I A++*++VG CKN* TLF Sbjct: 3920 DLLSSIDPAQSASEKALTRVDDERLILRPRSTENFTYLKILFTAIQ*SIVGLCKN*QTLF 3741 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 TA EISGLV V+Y*RAPT LYLV S VP DSFS D+GV GLQ F K Sbjct: 3740 TANEISGLVKVRY*RAPTILLYLVASVSPRAVPL*ADSFSDTDRGVLTGLQSSILALFNK 3561 Query: 1617 SVAYFS 1634 S AYFS Sbjct: 3560 S*AYFS 3543 Score = 64.3 bits (134), Expect(4) = 8e-28 Identities = 40/98 (40%), Positives = 50/98 (51%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+ E+ K T F KPI NLI * K + N S KM +YLN+ S MK I Sbjct: 4320 VKIVSEIPKLWSTERFSKPICNLIT*RYKLDF*LLSGNPFSDKMIVYLNMFSSCMKHRIN 4141 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC 1150 QV S I+TP T S R Y+ L L+P+ IC Sbjct: 4140 SQVSSSQIITPHTCSFR*IYS*LFK*SLNPHYLCRCIC 4027 Score = 47.8 bits (98), Expect(4) = 8e-28 Identities = 26/58 (44%), Positives = 33/58 (56%) Frame = +2 / -1 Query: 1340 TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 T I FHIS L + W M*KLT L+Y K +IR + QILKS+ TS+ S + Sbjct: 3837 TKIN*EFHIS*NPLHCHPMIYSWTM*KLTDLIYCK*NIRPSQSQILKSSNYTSISSCI 3664 Score = 42.8 bits (87), Expect(4) = 8e-28 Identities = 21/39 (53%), Positives = 28/39 (71%) Frame = +2 / -1 Query: 1196 LFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHK 1312 LFS P N+IR +K+ K + *+SVI SCP+ I KST+K Sbjct: 3981 LFSCTPGNQIRPQKHSKTSS*SSVIN*SCPISI*KSTNK 3865 Score = 25.4 bits (49), Expect(4) = 8e-28 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 / -3 Query: 1549 VFLY*IKEWVWVYNLVGQAFLPSLLHIFLEKDEVH 1653 VFL +E+ VYNL F + HIFL + H Sbjct: 3628 VFLIQTEEY*QVYNLAYLLFSTNHRHIFLVSVKYH 3524 Score = 88.6 bits (187), Expect(2) = 2e-27 Identities = 60/173 (34%), Positives = 87/173 (50%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 +RKIC +K+ RL*T +S + RKT+S N R + *I SSV D Sbjct: 3540 TRKICL*FVEKSKYARL*TC*YSSVCIRKTVSS*WNCSRRNRCN*I*KYSWSSSVSDFD* 3719 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 *Y +C K G+ VFT +N+ SL + KICE + WS + ++C CFF LGR Sbjct: 3720 A*YFICSK*GLSVFT*SNYRSLDGSEEDFKICEILS*SWS*DKSFIIHSC*CFFRC*LGR 3899 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 + *Q N C + F+ C KT + +I +R +Q KC+ ++G+ Sbjct: 3900 IN**QKINWRFCCVSGVEFGFLECKKTGYSIKIKYRS*IQSCCKCNGRGNVGS 4058 Score = 55.6 bits (115), Expect(2) = 2e-27 Identities = 26/60 (43%), Positives = 39/60 (65%) Frame = -2 / +3 Query: 1085 *DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 *+ +++V* S++L C S +SC N +*DR SFC R+ C+ + + VY F+ SS WVY Sbjct: 4092 *NCMYVV**SGSYLLGC*SCVSCTN*TY*DRLSFCQRKGCQKAIRNQVYIFR*SSYRWVY 4271 Score = 69.3 bits (145), Expect(2) = 1e-16 Identities = 57/151 (37%), Positives = 76/151 (50%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 VLF + GQD MT+ Q L F I F G+ EN+ + D + T+ QM + + Sbjct: 3872 VLFQMLIGQDQLMTEDQLEVLLCFWGRIWFPGVQENRLQYQDQVQKLNTKLLQMQRQR*C 4051 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G +S * L+L V GV + E T L I FM E + LR* IL E+ L ++ Sbjct: 4052 GFRLYLKS*E*IHLKLHVCGVIIWELLTWLLILCFMHELNILR*TIILSEKGLPESN*KS 4231 Query: 945 GLFIQKIKLLMGLQKLYVHKVLKTSNIIST* 853 L++Q IKL MGL L V L S+ I T* Sbjct: 4232 SLYLQVIKLQMGLLNLSVLHNLGISDTILT* 4324 Score = 38.2 bits (77), Expect(2) = 1e-16 Identities = 34/77 (44%), Positives = 39/77 (50%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 KKNM *K +VN LL L QKN E L* + L+ +V LFSI* Sbjct: 3542 KKNMPMIC*KEQVC*IVNLLVLLCLYQKNCQLIVELL*EKQMQLDIEV*LELFSI*L*LG 3721 Query: 1455 LISPLL*TRCVSFYMHQ 1405 LI L * R VSFY+ Q Sbjct: 3722 LIFHLQ*IRSVSFYIVQ 3772 Score = 34.1 bits (68), Expect(2) = 0.012 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = +1 / -3 Query: 1339 DQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEE 1482 DQ +SHIL + ++L L +VKT+ P L Q +YQ S+TEE Sbjct: 3838 DQDQLRISHILKSSSLPSNDL*LDYVKTDRPYLLQMKYQA*SKSDTEE 3695 Score = 31.8 bits (63), Expect(2) = 0.012 Identities = 29/74 (39%), Positives = 37/74 (50%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D +*+ + ++ *TH LD L *T + Q L QN++LSQ F HE Sbjct: 4330 TYLS*DCI*NS*VVEHREV**THL*LDHLKI*T*FLIAFWQPFL*QNDSLSQYV*FVHET 4151 Query: 1027 LDWQTSMWLQHCHT 1068 D Q S L HT Sbjct: 4150 QD*QPSK*LPDYHT 4109
>LOC_Os05g13510:12005.t01129:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4323 Score = 436 bits (946), Expect = e-121 Identities = 176/267 (65%), Positives = 215/267 (80%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA D++K+ + CK TPLS +EKLS EG P D+T+YR LVGALQ Sbjct: 3508 NGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQ 3687 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPD+SF+VNKVC +LHAPTT H+ AAKRI+RY+KHT+ +GL SKS S LVSAFS Sbjct: 3688 YLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFS 3867 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGCLDDR STGGFA+F GPNL+SWSARKQATVSRSS EA YKALAN TAE++W+Q+ Sbjct: 3868 DADWAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQT 4047 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L ELGI++ K WCDN+GA Y++AN VFHARTKHIE+D+HFV ERVA K L + +I Sbjct: 4048 LLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQVEYIS 4227 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNL 854 +KDQVADGFTK L + E F++NLNL Sbjct: 4228 TKDQVADGFTKTLSVRQLEMFRNNLNL 4308 Score = 260 bits (562), Expect = 2e-68 Identities = 136/243 (55%), Positives = 154/243 (63%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S I K+ AT S TK* S S+C V A*KT LA Y AP LSH +L Sbjct: 4256 VKPSAT*SLVDIYSTCKNFLATRSRTK**STSICLVRA*KTGLAVIYFAPILSHHTLAIL 4077 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 IP+S S C H+ SAV A ALY AS+LDL+TVAC A H+ RLGP A PPVE Sbjct: 4076 GA*IPSS*SKVCIHIISAVTLAKALYSASVLDLDTVACLRALHDTRLGPIKTAKPPVECR 3897 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS+HPAQS EKALT E DLL F P +VCF YL I LAA + VVGACK HTLFT Sbjct: 3896 SSKHPAQSASEKALTRRELDLLIFSPSLTVCFKYLKILLAAAQCLVVGACKYWHTLFTEN 3717 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 + SGLV VKY APTR LYLV+S+ G+PS +FS +DKGV LQ F S+A Sbjct: 3716 DKSGLVRVKYCNAPTRLLYLVLSSGPKGLPS*ALNFSEIDKGVLTALQSLIFTLFNTSIA 3537 Query: 1626 YFS 1634 YFS Sbjct: 3536 YFS 3528 Score = 144 bits (309), Expect = 2e-33 Identities = 87/227 (38%), Positives = 120/227 (52%) Frame = +2 / -1 Query: 956 EFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDF 1135 +F CN L++K+ IYLN+L +SMK+ I + +NI+TP + +Q + GL+P++ Sbjct: 4206 KFSCNPLTNKVIIYLNMLGASMKNRISCHILCTNIITPYLSNFGCLNSQFMK*GLYPHNL 4027 Query: 1136 SCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKC 1315 I L+ CL RSG S L + P*++IR K K +I SCP+ IR+ST+K Sbjct: 4026 CSNISQSLIFCLCTRSGYSSLLACTP*HKIRPYKNSKTPSRMPIIQTSCPICIRESTYKK 3847 Query: 1316 RRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQT 1495 R LA * + MF IS L + GWCM L HL+Y K I S + QIL+ + QT Sbjct: 3846 RIRLANF*PKLNCMFQISQNPLSRRPMLSGWCMQILAHLIY*K**IWSSQSQILQCSNQT 3667 Query: 1496 SVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 SV +V R +F *FF R RS FT + IF L Sbjct: 3666 SVPGTVFWSKRITFMST*FF*NRQRSIDCFTVTHIHSL*HIHSIFLL 3526 Score = 108 bits (231), Expect(2) = 3e-30 Identities = 64/166 (38%), Positives = 92/166 (55%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYK 1458 +R+IC K++ L*+ +SF+ +RK R ++ Y +Q SG +VFD+ Sbjct: 3525 TREICYGCVKESEYE*L*SSQYSFVYFRKIKCS*R*SFWTRRQYQVQKSGWSIAVFDSD* 3704 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T +++ K GV VF CTNH +L +I ETY+ W+K QV F +C+CF * RLGR Sbjct: 3705 TRFIIFSK*GVPVFACTNH*ALGGG*EDFEIFETYS*AWAKN*QV*FSSCKCFL*CRLGR 3884 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCH 1140 M * F C + *S M C + S+C QI*+RGR+ G C+ Sbjct: 3885 MFG*SAFYWGFCCFYRA*SCVMECTQASYCIQI*YRGRI*GFG*CY 4022 Score = 44.6 bits (91), Expect(2) = 3e-30 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 +V* W + S SC ++A+* R S C CK +Y ++RSSC*W+++ Sbjct: 4092 MV**YWCKVYDS*SCFSCSHQAY*GRLSLCS*AGCKKIFTSGIYIYQRSSC*WLHQ 4259 Score = 54.2 bits (112), Expect(3) = 3e-17 Identities = 41/106 (38%), Positives = 55/106 (51%) Frame = -1 / +2 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+*NI+ L * AS +L L*VL L+Q GQD M + L + LI HG+ +K Sbjct: 3791 *DI*NIQLSLG*KLASLILFL*VLSLMQIGQDVWMIGILLGVLLFL*GLILCHGVHASKL 3970 Query: 1191 LFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTML 1054 L+PDL RQ R M + G P +W + +L GV +L Sbjct: 3971 LYPDLVQRQNIRLWLMLLQRLCGYKPYFMNWEFRHPKLLRYGVIIL 4108 Score = 37.3 bits (75), Expect(3) = 3e-17 Identities = 26/57 (45%), Positives = 29/57 (50%) Frame = -1 / +2 Query: 1572 LLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQP 1402 LL L QKN + K L Q T+ T+VW SI* D I * RC S MHQP Sbjct: 3590 LLCLFQKN*VLMKVILLDQKTVPGTEVWLEHCSI*L*LDQIYHFQ*IRCASICMHQP 3760 Score = 35.4 bits (71), Expect(3) = 3e-17 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = -1 / +2 Query: 1023 FMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 FML S LR*I L LQ N + + +++ KIKLLM Sbjct: 4139 FMLAPSILR*IITLFVSGLQENFYKWNIYLPKIKLLM 4249 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 30/71 (42%), Positives = 35/71 (49%) Frame = +1 / -3 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*N 1335 P LP *IW Q L +M D* Q N H ILP+L+ +KH Q TC* Sbjct: 4006 PYILPLY*IWIQ*LACVHSMTQD*AL*KQQNPQ*NADHPNILPNLHQRKHLQEEN*TC*F 3827 Query: 1336 LDQYSAYVSHI 1368 L Q YVS+I Sbjct: 3826 LAQA*LYVSNI 3794 Score = 38.6 bits (78), Expect(2) = 3e-08 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = +1 / -3 Query: 1402 WLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CPLNL*VFLP*EIVFLY*IKEWVW 1581 WLVH T TP L + V SNT PD C C L +L ++FL * KE+ Sbjct: 3760 WLVHANTGTPYLLKMINLV*SESNTAMLQPDFCTWYCLLVQKDYLHEHLIFLK*TKEY*L 3581 Query: 1582 VYN 1590 +Y+ Sbjct: 3580 LYS 3572
>LOC_Os06g13540:12006.t01229:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4353 Score = 435 bits (945), Expect = e-121 Identities = 179/272 (65%), Positives = 215/272 (79%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 ++ +L LSQ KYAT+L+ + GL+ CKP TPL+ +EK S + G + D TKYR +VG Sbjct: 3517 SEGSLVLSQRKYATELISRAGLRNCKPVSTPLAVSEKFSSVGGVLLSEEDGTKYRSIVGG 3696 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPDI+FAVNK C +LH+PTT+H+TA KR++RYV TL GL +S ST +SA Sbjct: 3697 LQYLTLTRPDIAFAVNKACQYLHSPTTLHWTAVKRVLRYVSGTLTFGLKIGRSDSTTISA 3876 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 FS++DWAGC DDRRSTGGFAIF G NLISWSARKQATVSRSS EA YKALANATAEVIW+ Sbjct: 3877 FSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWI 4056 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 Q++LKELG+ K WCDN+GATYLSAN VFHARTKHIE+D+HFV ERVA +LLDIRF Sbjct: 4057 QTLLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVAQRLLDIRF 4236 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 I S DQ+ADGFTKA + F++NLNL K+ Sbjct: 4237 ISSGDQLADGFTKAQSLSKLQIFRNNLNLCKV 4332 Score = 250 bits (541), Expect = 2e-65 Identities = 132/244 (54%), Positives = 150/244 (61%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 A V PSA *S E INR+S + AT S TK* S SMC VLA* T LA++ VAP LSHQ Sbjct: 4277 ALVKPSAN*SPEDINRISNNRCATRSLTK**STSMCLVLA*NTGLAER*VAPILSHQSTA 4098 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S S MTSAVA A+ALY AS+L+ ETVACFLA H+++L P+ IA PPVE Sbjct: 4097 AFGCDTPSSLSKV*IQMTSAVALANALYSASVLERETVACFLALHDIKLKPRKIAKPPVE 3918 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 RLSS HPAQS E AL VE DL FRP V TYL AV+ VVG CK *H LFT Sbjct: 3917 RLSSEHPAQSASENALIVVESDLPIFRPNVKVPLTYLKTLFTAVQCKVVGECKY*HALFT 3738 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 AK +SG V+VKY PT LY V S+ P ++FS GV GLQ P S Sbjct: 3737 AKAMSGRVNVKYCNPPTILLYFVPSSSLNSTPPTDENFSETASGVLTGLQFLNPALLINS 3558 Query: 1620 VAYF 1631 VAYF Sbjct: 3557 VAYF 3546 Score = 134 bits (288), Expect = 1e-30 Identities = 77/191 (40%), Positives = 109/191 (57%) Frame = +2 / -1 Query: 941 KPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGL 1120 KP++Q+ + N S+KM IY +V S MK + R++ +NIVTP+ SL Y++ L GL Sbjct: 4236 KPDIQQPLRNPFSNKMIIYFDVFSSGMKHRVSREISCTNIVTPKYCSLWL*YSKFLKQGL 4057 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRK 1300 +P DFS I *CLV C AR+GN LFS P* I +K+ K T *TS+I* SCP+ I + Sbjct: 4056 NPNDFSSSIS*CLVLCFCARAGNCSLFSCTP*Y*IETKENSKTTS*TSII*TSCPICI*E 3877 Query: 1301 STHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILK 1480 T+ + *T Q +IS +L V W +* LT L++ KG +R+ IL Sbjct: 3876 RTNSSGV*SSNF*TKCQSATNISQNSLYRRPVQSCW*V*ILTCLIHRKGYVRTS*R*IL* 3697 Query: 1481 STYQTSVFSSV 1513 T T + ++ Sbjct: 3696 PTNNTPILCTI 3664 Score = 97.7 bits (207), Expect(2) = 1e-27 Identities = 47/118 (39%), Positives = 69/118 (58%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++F+ +*+ LC + G+ +FT TN+ +L + +IC + + WSK ++ + C Sbjct: 3699 TIFNVNSS*HSLCGE*GMSIFTLTNNFALDGGKESFEIC*WHFDIWSKNWKIRLHYY*CV 3878 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 RLGRM R* TFN W C W + M C KTS+ F +*HR RVQG S C+ *SH+ Sbjct: 3879 LRCRLGRMFR**TFNWWFCYFPWFQFNIMECKKTSYSFPL*HRSRVQGIS*CYC*SHL 4052 Score = 46.9 bits (96), Expect(2) = 1e-27 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 LV*Q W ++ +C +SC N H R SFC R C +G+ VY F S W + Sbjct: 4107 LV*QYWCNLSLC*PCVSCQN*THRSRLSFC*RTGCATVVGYPVYIFW*SISRWFH 4271 Score = 95.0 bits (201), Expect(2) = 3e-20 Identities = 54/120 (45%), Positives = 67/120 (55%) Frame = -1 / +2 Query: 1293 IQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNP 1114 +Q GQD M DVQ V L + L I +HG+ ENK FP LA +Q TRH* M LKS+G P Sbjct: 3884 MQIGQDVQMIDVQLVVLLFSLVSI*YHGVQENKLQFPALAQKQSTRH*LMLLLKSFGFKP 4063 Query: 1113 C*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFI 934 C R+ RL GVT+L L FM E +T +*I IL E L+ W GL++ Sbjct: 4064 CLRNLEYHNQRLQYFGVTILVQLISLLTLCFMPELNTSK*IIILLENGLRNGCWISGLYL 4243 Score = 24.9 bits (48), Expect(2) = 3e-20 Identities = 25/83 (30%), Positives = 39/83 (46%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K NMQ + L + N L L +K++ E+ *++ + + V V ++I* Sbjct: 3542 KGNMQLS*SVELG*GIANR*VLHLLFRKSFHR*VEYC*VKKMVQSIGVLLVGYNI*R*LV 3721 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQ 1387 L PL * R V+ Y HQ T + Sbjct: 3722 LT*PLR*IRHVNIYTHQQLCTGR 3790 Score = 78.5 bits (165), Expect = 1e-13 Identities = 53/133 (39%), Positives = 66/133 (49%) Frame = +1 / -3 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES* 1086 * H +D *T P Q L QN+NL +C F HE Q Q+CHT+ + Sbjct: 4270 *NHLLIDHQKI*TGYPTTVAQPVL*QNDNLLRCV*FWHETQG*QRDKLHQYCHTKVLQPL 4091 Query: 1087 SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVC 1266 + P A *LQ H L+PCTL C* K LVF +M +* Q Q H LNV Sbjct: 4090 VVILQVP*ARFESK*LQQ*H*LMPCTLLLC*SGKL*LVFLHSMILN*NQGK*QNHQLNVY 3911 Query: 1267 HLGILPSLN*KKH 1305 HL ILP+L+ + H Sbjct: 3910 HLNILPNLHLRTH 3872
>LOC_Os10g40800:12010.t03319:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4262 Score = 435 bits (945), Expect = e-121 Identities = 177/263 (67%), Positives = 215/263 (81%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ + CK TPLS +EKLS EG P+ D+T+YR LVGALQYLTL Sbjct: 3459 LTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTL 3638 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+SF+VNKVC +LHA TT H+ AAKRI+RY+KHT+ +GL SKS S LVSAFS++DW Sbjct: 3639 TRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADW 3818 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATAE++W+Q++L E Sbjct: 3819 AGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHE 3998 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI+ K WCDN+GA Y++AN VFHARTKHIE+D+HFV ERVA KLL + +I +KDQ Sbjct: 3999 LGIQVPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQ 4178 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 VADGFTK L + E F++NLNL Sbjct: 4179 VADGFTKTLSVRQLEMFRNNLNL 4247 Score = 264 bits (571), Expect = 1e-69 Identities = 138/243 (56%), Positives = 155/243 (63%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S I KS AT S TK* S S+C V A*KT LA Y AP LSH +L Sbjct: 4195 VKPSAT*SLVDIYSTCKSFLATRSRTK**STSICLVRA*KTGLAVIYFAPILSHHTLAIL 4016 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 IP+S S C H+ SAVA A ALY AS+LDL+TVAC A H+ RLGP A PPVER Sbjct: 4015 GT*IPSS*SKVCIHIISAVALAKALYSASVLDLDTVACLRALHDTRLGPIKTAKPPVERR 3836 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS+HPAQS EKALT E DLL F P +VCF YL I LAA + VV ACK HTLFT Sbjct: 3835 SSKHPAQSASEKALTRRELDLLIFSPSLTVCFKYLKILLAATQCLVVAACKYWHTLFTEN 3656 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 + SGLV VKY APTR LYLV+S+ G+PS +FS +DKGV LQ F S+A Sbjct: 3655 DKSGLVRVKYCNAPTRLLYLVLSSGPRGLPS*ALNFSEIDKGVLTALQSLIFTLFNTSIA 3476 Query: 1626 YFS 1634 YFS Sbjct: 3475 YFS 3467 Score = 136 bits (291), Expect = 5e-31 Identities = 85/227 (37%), Positives = 119/227 (52%) Frame = +2 / -1 Query: 956 EFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDF 1135 +F CN L++K+ IYL++L +SMK+ I + +NI+TP + +Q + GL+P++ Sbjct: 4145 KFSCNPLTNKVIIYLDMLGASMKNRISCHILCTNIITPYLSNFGYLNSQFMK*GLYPHNL 3966 Query: 1136 SCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKC 1315 I L+ C RSG S L + P*++IR K K T +I SCP+ IR+ST+K Sbjct: 3965 CSSISQSLIFCFCTRSGYSSLLTCTP*HKIRPYKNSKTPSRTPIIQTSCPICIRESTYKK 3786 Query: 1316 RRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQT 1495 R LA * + MF IS L + G CM L HL+Y K I S + QIL+ + QT Sbjct: 3785 RIRLANF*PKLNCMFQISQNPLSRHPMLSGCCMQILAHLIY*K**IWSSQSQILQCSNQT 3606 Query: 1496 SVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 SV +V R +F *FF R RS FT + IF L Sbjct: 3605 SVPGTVFWSKRITFMST*FF*NRQRSIDCFTVTHIHSL*HIHSIFLL 3465 Score = 89.5 bits (189), Expect(2) = 1e-24 Identities = 50/123 (40%), Positives = 68/123 (55%) Frame = -2 / +2 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y +Q SG +VFD+ T +++ K GV VF C+NH +L +I ETY+ W+K Sbjct: 3593 YQVQKSGWSIAVFDSD*TRFIIFSK*GVPVFACSNH*ALGGG*EDFEIFETYS*AWAKN* 3772 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 QV F +C+CF * RLGRM * F C + *S M C +C QI*+R R+ G Sbjct: 3773 QV*FSSCKCFL*CRLGRMFG*SAFYWGFCCFYRA*SCVMECT*AGYCIQI*YRSRI*GFG 3952 Query: 1148 KCH 1140 C+ Sbjct: 3953 *CY 3961 Score = 45.1 bits (92), Expect(2) = 1e-24 Identities = 20/56 (35%), Positives = 31/56 (55%) Frame = -2 / +2 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 +V* W + S SC ++A+ R S C CK T +Y ++RSSC*W+++ Sbjct: 4031 MV**YWCKVYDS*SCFSCSHQAYRGRLSLCS*AGCKKTFTSGIYIYQRSSC*WLHQ 4198 Score = 51.5 bits (106), Expect(3) = 1e-14 Identities = 40/106 (37%), Positives = 55/106 (51%) Frame = -1 / +1 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+*NI+ L * AS +L L*VL L+Q GQD M V L + LI HG+ ++ Sbjct: 3730 *DI*NIQLSLG*KLASLILFL*VLSLMQIGQDVWMIGVLLGVLLFL*GLILCHGVHVSRL 3909 Query: 1191 LFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTML 1054 L+PDL +Q R M + G P +W + +L GV +L Sbjct: 3910 LYPDLVQKQNIRLWLMLLQRLCGYKPYFMNWEFRYPKLLRYGVIIL 4047 Score = 33.6 bits (67), Expect(3) = 1e-14 Identities = 25/57 (43%), Positives = 28/57 (49%) Frame = -1 / +1 Query: 1572 LLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQP 1402 LL L QKN + K L Q T+ T+VW SI* D I * RC S M QP Sbjct: 3529 LLCLFQKN*VLMKVILLDQKTVPGTEVWLEHCSI*L*LDQIYHFQ*IRCASICMQQP 3699 Score = 32.7 bits (65), Expect(3) = 1e-14 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -1 / +1 Query: 1023 FMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 FML S R*I L LQ N + + +++ KIKLLM Sbjct: 4078 FMLAPSISR*IITLFVSGLQENFYKWNIYLPKIKLLM 4188 Score = 37.3 bits (75), Expect(2) = 3e-06 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +1 / -3 Query: 1402 WLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CPLNL*VFLP*EIVFLY*IKEWVW 1581 WL+H T TP L + V SNT PD C C L +L ++FL * KE+ Sbjct: 3699 WLLHANTGTPYLLKMINLV*SESNTAMLQPDFCTWYCLLVQEDYLHEHLIFLK*TKEY*L 3520 Query: 1582 VYN 1590 +Y+ Sbjct: 3519 LYS 3511 Score = 35.0 bits (70), Expect(2) = 3e-06 Identities = 28/71 (39%), Positives = 34/71 (47%) Frame = +1 / -3 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*N 1335 P L *IW Q + +M D* Q N H ILP+L+ +KH Q TC* Sbjct: 3945 PYILLLY*IWIQ*PAYVHSMTQD*AL*KQQNPQ*NADHPNILPNLHQRKHLQEEN*TC*F 3766 Query: 1336 LDQYSAYVSHI 1368 L Q YVS+I Sbjct: 3765 LAQA*LYVSNI 3733
>LOC_Os06g37290:12006.t03424:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4326 Score = 434 bits (942), Expect = e-121 Identities = 173/268 (64%), Positives = 219/268 (81%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L L+ EKYA+D++++ G+ CKP TPLS +EKLS G + D+T+YR +VGALQ Sbjct: 3517 DGLVLT*EKYASDVLRRVGMSDCKPVNTPLSISEKLSSQGGASLGPNDSTQYRSIVGALQ 3696 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC +LHAP T H+ A KRI+RY+KHT+ +GL +KS S LVSAF+ Sbjct: 3697 YLTLTRPDISFSVNKVCQYLHAPATDHWAAVKRILRYIKHTVKLGLQINKSSSLLVSAFT 3876 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSSIEA YKALANATAE++W+Q+ Sbjct: 3877 DADWAGCLDDRRSTGGFAVFVGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWIQT 4056 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L+ELG+K + WCDN+GA YL+AN VFHARTKHIE+D+HFV ERVA KLL++ ++ Sbjct: 4057 LLQELGVKGPRAAKVWCDNIGAKYLTANPVFHARTKHIEVDYHFVRERVARKLLEVEYVS 4236 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLI 851 SKDQVADGF K L + E F++NLNL+ Sbjct: 4237 SKDQVADGFIKTLTVRQMEMFRNNLNLV 4320 Score = 270 bits (583), Expect = 3e-71 Identities = 138/246 (56%), Positives = 158/246 (64%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 K + PSAT*S + S +L AT S TK* S S+CFVLA*KT A KY+AP LSH Sbjct: 4274 KVLIKPSAT*SLDETYSTSSNLRATRSLTK**STSICFVLA*KTGFAVKYLAPILSHHTL 4095 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L F P+S S C H+ SAVAFA+ALY AS+LDLETVACF A + RLGP ANPPV Sbjct: 4094 AALGPFTPSS*SNVCIHIISAVAFANALYSASILDLETVACFRALQDTRLGPTKTANPPV 3915 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSR PAQS ALTS E DLL RP F+VCF YL I A +*+V GACK *HTLF Sbjct: 3914 DLLSSRQPAQSASVNALTSKELDLLICRPSFTVCFIYLNILFTAAQ*SVAGACKY*HTLF 3735 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T +ISGLV+VKY APT Y V+S P D+FS +D+GV GLQ P Sbjct: 3734 TENDISGLVNVKYCSAPTMLRY*VLSLGPRDAPP*LDNFSEMDRGVFTGLQSLIPTLLRT 3555 Query: 1617 SVAYFS 1634 S AYFS Sbjct: 3554 SEAYFS 3537 Score = 152 bits (326), Expect = 8e-36 Identities = 78/182 (42%), Positives = 107/182 (58%) Frame = +2 / -1 Query: 968 NSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGI 1147 NS S+KM I+L +LCS MK+ I V SNI+TP R FYT+ L L+P++F C I Sbjct: 4203 NSFSNKMIIHLYMLCSGMKNWICC*VFSSNIITPYLSGSRPFYTKFLK*CLYPHNFCCCI 4024 Query: 1148 C*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGL 1327 C CLV + S + LFS P ++RS K K + +SVI +CP+ I K T+K R L Sbjct: 4023 CQCLVFSFNT*SRDCSLFSCTPRYKVRSYKNSKSSSGSSVIKTACPICISKCTNKQRTRL 3844 Query: 1328 AEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFS 1507 +*T MF+I Y+ C + C W M* LT+LVY K I SC CQIL+ + ++ S Sbjct: 3843 VNL*TKFHSMFYIPQYSFYRCPMICSWSM*ILTYLVY*K*YIWSC*CQILQCSNYAAILS 3664 Query: 1508 SV 1513 ++ Sbjct: 3663 AI 3658 Score = 123 bits (264), Expect = 3e-27 Identities = 68/172 (39%), Positives = 97/172 (56%) Frame = -2 / +3 Query: 1481 SSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCEC 1302 ++VFD KT Y++ KQG+ VFTC+++ SL S + ++ +TY E WS QV F+ C C Sbjct: 3690 TAVFDINKTRYIIFSKQGMSVFTCSSYRSLGSGKKNIEVYKTYCETWSTD*QV*FFAC*C 3869 Query: 1301 FF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 +* RLGR+ *Q + +C T* + C KTS+ I + +QG KC+S +++ Sbjct: 3870 IY*CRLGRLS**QKIHWRICCFCRT*PCILECTKTSYSL*IKY*S*IQGIGKCNSRNYVD 4049 Query: 1121 AIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 G K+ * +V* WS IL +SS SC NKA+ SFC R SC Sbjct: 4050 TNITSGTWCKRA*SR*GMV**YWS*ILNSKSSFSCQNKAYRGGLSFC*RTSC 4205 Score = 58.3 bits (121), Expect(2) = 8e-16 Identities = 30/71 (42%), Positives = 42/71 (59%) Frame = +1 / -3 Query: 1264 CHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQ 1443 CH LP+L+ H Q TC*++DQ S YV + ++ L ++L L HV T+ PCL + Sbjct: 3907 CHQDSLPNLHQ*MH*QAKN*TC*SVDQVSQYVLYTSIFFLPLPNDL*LEHVNTDIPCLLK 3728 Query: 1444 RRYQVL*VSNT 1476 Y VL +SNT Sbjct: 3727 MIYLVLLMSNT 3695 Score = 46.4 bits (95), Expect(2) = 8e-16 Identities = 27/65 (41%), Positives = 34/65 (52%) Frame = +1 / -3 Query: 967 QLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWH 1146 QL L QN+N ALF HE+LD S+ LQ+ HT *+ L+ P * L H Sbjct: 4204 QLVL*QNDNPPLYALFWHEKLDLLLSI*LQYYHTIP*RL*ALLHQVPEVMFVST*FLLLH 4025 Query: 1147 LLVPC 1161 L +PC Sbjct: 4024 LPMPC 4010 Score = 84.9 bits (179), Expect = 1e-15 Identities = 73/170 (42%), Positives = 84/170 (49%) Frame = -1 / +2 Query: 1476 SI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLF 1297 SI*H QD I *TR VS YM Q Q Q * +*NI * LV S +L L V Sbjct: 3695 SI*H*QDQIYHFQ*TRYVSIYMLQLQIIGQR*KEY*GI*NIL*NLVYRLTSLVLCLLVHL 3874 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+Q GQ MT+ L + DL + G+ ENK D + TRH QM Q K G Sbjct: 3875 LMQIGQAVLMTEDPLEDLLFL*DLTLYLGVHENKLQSLDQVLKLNTRHWQMQQQKLCGYK 4054 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCEREL 967 R+ V*K L GV +LE +T I FM EQS R I IL E EL Sbjct: 4055 HYFRNLV*KGLEPLRYGVIILELNT*QQIQFFMPEQSI*RWIIILLENEL 4204
>LOC_Os06g39540:12006.t03651:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4353 Score = 433 bits (940), Expect = e-120 Identities = 178/272 (65%), Positives = 214/272 (78%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 ++ +L LSQ KYAT+L+ + L+ CKP TPL+ +EK S + G + D TKYR +VG Sbjct: 3517 SEGSLVLSQRKYATELISRARLRNCKPVSTPLAVSEKFSSVGGVLLSEEDGTKYRSIVGG 3696 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPDI+FAVNK C +LH+PTT+H+TA KR++RYV TL GL +S ST +SA Sbjct: 3697 LQYLTLTRPDIAFAVNKACQYLHSPTTLHWTAVKRVLRYVSGTLTFGLKIGRSDSTTISA 3876 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 FS++DWAGC DDRRSTGGFAIF G NLISWSARKQATVSRSS EA YKALANATAEVIW+ Sbjct: 3877 FSDADWAGCSDDRRSTGGFAIFLGSNLISWSARKQATVSRSSTEAEYKALANATAEVIWI 4056 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 Q++LKELG+ K WCDN+GATYLSAN VFHARTKHIE+D+HFV ERVA +LLDIRF Sbjct: 4057 QTLLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVAQRLLDIRF 4236 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 I S DQ+ADGFTKA + F++NLNL K+ Sbjct: 4237 ISSGDQLADGFTKAQSLSKLQIFRNNLNLCKV 4332 Score = 246 bits (531), Expect = 4e-64 Identities = 131/244 (53%), Positives = 149/244 (61%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 A V PSA *S E INR+S + AT S TK* S SMC VLA* T LA++ VAP LSHQ Sbjct: 4277 ALVKPSAN*SPEDINRISNNRCATRSLTK**STSMCLVLA*NTGLAER*VAPILSHQSTA 4098 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S S MTSAVA A+ALY AS+L+ ETVACFLA H+++L P+ IA PPVE Sbjct: 4097 AFGCDTPSSLSKV*IQMTSAVALANALYSASVLERETVACFLALHDIKLEPRKIAKPPVE 3918 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 RLSS HPAQS E AL VE DL FRP V TYL AV+ VVG CK *H LFT Sbjct: 3917 RLSSEHPAQSASENALIVVESDLPIFRPNVKVPLTYLKTLFTAVQCKVVGECKY*HALFT 3738 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 AK +SG V+VKY PT LY V S+ P ++FS GV GLQ S Sbjct: 3737 AKAMSGRVNVKYCNPPTILLYFVPSSSLNSTPPTDENFSETASGVLTGLQFLNLALLINS 3558 Query: 1620 VAYF 1631 VAYF Sbjct: 3557 VAYF 3546 Score = 133 bits (286), Expect = 3e-30 Identities = 77/191 (40%), Positives = 109/191 (57%) Frame = +2 / -1 Query: 941 KPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGL 1120 KP++Q+ + N S+KM IY +V S MK + R++ +NIVTP+ SL Y++ L GL Sbjct: 4236 KPDIQQPLRNPFSNKMIIYFDVFSSGMKHRVSREISCTNIVTPKYCSLWL*YSKFLKQGL 4057 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRK 1300 +P DFS I *CLV C AR+GN LFS P* I +K+ K T *TS+I* SCP+ I + Sbjct: 4056 NPNDFSSSIS*CLVLCFCARAGNCSLFSCTP*Y*IGTKENSKTTS*TSII*TSCPICI*E 3877 Query: 1301 STHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILK 1480 T+ + *T Q +IS +L V W +* LT L++ KG +R+ IL Sbjct: 3876 RTNSSGV*SSNF*TKCQSATNISQNSLYRRPVQSCW*V*ILTCLIHRKGYVRTS*R*IL* 3697 Query: 1481 STYQTSVFSSV 1513 T T + ++ Sbjct: 3696 PTNNTPILCTI 3664 Score = 97.7 bits (207), Expect(2) = 1e-27 Identities = 47/118 (39%), Positives = 69/118 (58%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++F+ +*+ LC + G+ +FT TN+ +L + +IC + + WSK ++ + C Sbjct: 3699 TIFNVNSS*HSLCGE*GMSIFTLTNNFALDGGKESFEIC*WHFDIWSKNWKIRLHYY*CV 3878 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 RLGRM R* TFN W C W + M C KTS+ F +*HR RVQG S C+ *SH+ Sbjct: 3879 LRCRLGRMFR**TFNWWFCYFPWFQFNIMECKKTSYSFPL*HRSRVQGIS*CYC*SHL 4052 Score = 46.9 bits (96), Expect(2) = 1e-27 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 LV*Q W ++ +C +SC N H R SFC R C +G+ VY F S W + Sbjct: 4107 LV*QYWCNLSLC*PCVSCQN*THRSRLSFC*RTGCATVVGYPVYIFW*SISRWFH 4271 Score = 94.5 bits (200), Expect(2) = 4e-20 Identities = 54/120 (45%), Positives = 67/120 (55%) Frame = -1 / +2 Query: 1293 IQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNP 1114 +Q GQD M DVQ V L + L I +HG+ ENK FP LA +Q TRH* M LKS+G P Sbjct: 3884 MQIGQDVQMIDVQLVVLLFSLVPI*YHGVQENKLQFPALAQKQSTRH*LMLLLKSFGFKP 4063 Query: 1113 C*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFI 934 C R+ RL GVT+L L FM E +T +*I IL E L+ W GL++ Sbjct: 4064 CLRNLEYHNQRLQYFGVTILVQLISLLTLCFMPELNTSK*IIILLENGLRNGCWISGLYL 4243 Score = 24.9 bits (48), Expect(2) = 4e-20 Identities = 25/83 (30%), Positives = 39/83 (46%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K NMQ + L + N L L +K++ E+ *++ + + V V ++I* Sbjct: 3542 KGNMQLS*SVELG*GIANR*VLHLLFRKSFHR*VEYC*VKKMVQSIGVLLVGYNI*R*LV 3721 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQ 1387 L PL * R V+ Y HQ T + Sbjct: 3722 LT*PLR*IRHVNIYTHQQLCTGR 3790 Score = 56.1 bits (116), Expect(2) = 1e-10 Identities = 39/103 (37%), Positives = 48/103 (46%) Frame = +1 / -3 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES* 1086 * H +D *T P Q L QN+NL +C F HE Q Q+CHT+ + Sbjct: 4270 *NHLLIDHQKI*TGYPTTVAQPVL*QNDNLLRCV*FWHETQG*QRDKLHQYCHTKVLQPL 4091 Query: 1087 SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTM 1215 + P A *LQ H L+PCTL C* K LVF +M Sbjct: 4090 VVILQVP*ARFESK*LQQ*H*LMPCTLLLC*SGKL*LVFLHSM 3962 Score = 30.9 bits (61), Expect(2) = 1e-10 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / -3 Query: 1243 QTHLLNVCHLGILPSLN*KKH 1305 Q H LNV HL ILP+L+ + H Sbjct: 3934 QNHQLNVYHLNILPNLHLRTH 3872
>LOC_Os03g36684:12003.t03137:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5964 Score = 433 bits (939), Expect = e-120 Identities = 176/263 (66%), Positives = 213/263 (80%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ + CK TPLS +EKLS EGTP+ VD+T YR LVGAL YLTL Sbjct: 349 LTQEKYAKDVLKRVNMSDCKAVNTPLSISEKLSAYEGTPLGPVDSTWYRSLVGALHYLTL 528 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+SF+VNKVC +LHAPTT H+ AAKRI+RY+KHT+ +GL KS S LVSAFS++DW Sbjct: 529 TRPDLSFSVNKVCQYLHAPTTEHWAAAKRILRYLKHTVKLGLKIGKSNSLLVSAFSDADW 708 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKAL NATAE++W+Q++L E Sbjct: 709 AGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALENATAEIMWIQTLLHE 888 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI+ KT WCDN+GATY+ AN VF+ARTKHIE+D+HFV ERVA KLL + +I + DQ Sbjct: 889 LGIQVPKTAKVWCDNIGATYMIANPVFYARTKHIEVDYHFVRERVAQKLLQVEYISTNDQ 1068 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 V DGFTK L + E F++NLNL Sbjct: 1069 VVDGFTKTLTVKQVEMFRNNLNL 1137 Score = 269 bits (581), Expect = 5e-71 Identities = 143/246 (58%), Positives = 161/246 (65%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPS T*S I S AT S TK* S S+CFV A* T LA VAP LSH Sbjct: 1094 RVLVNPSTT*SLVDIYSTCNSFCATRSRTK**STSICFVRA*NTGLAII*VAPILSHHTL 915 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 VL IP+S S C H+ SAVAF+SALY AS+LDL+TVAC A H+ RLGP N A PPV Sbjct: 914 AVLGT*IPSS*SKVCIHIISAVAFSSALYSASVLDLDTVACLRALHDTRLGPINTAKPPV 735 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 ERLSSRHPAQS EKALTS E DL F+P +VCF YL I LAA + +VVGAC+ * TLF Sbjct: 734 ERLSSRHPAQSASEKALTSKELDLPIFKPSLTVCFRYLRILLAAAQCSVVGACRY*QTLF 555 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K+ SGLV VK RAPTR LY V+ST GVPS +FS +D GV LQ F Sbjct: 554 TEKDKSGLVKVK*CRAPTRLLYHVLSTGPRGVPS*ALNFSEIDSGVLTALQSLILTRFNT 375 Query: 1617 SVAYFS 1634 S+AYFS Sbjct: 374 SLAYFS 357 Score = 161 bits (347), Expect = 1e-38 Identities = 96/247 (38%), Positives = 132/247 (53%) Frame = +2 / -1 Query: 899 SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETG 1078 SF K I NLI N+Q+ + NS S+K+ +YLN+LC+S+K + + +NIVTP Sbjct: 1092 SFGKSIYNLIISRYIFNLQQLLRNSFSNKVIVYLNMLCTSIKHRVSYHISCTNIVTPYLS 913 Query: 1079 SLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC* 1258 S R Q + L+P++ S I C + C S +S LF+ P* +I S K+ K + * Sbjct: 912 SFRHLNPQFMKQSLYPHNLSSSIFQCFIFCFCTGSRHSSLFTCTP*YKIGSYKHGKTSS* 733 Query: 1259 TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVY 1438 T VI SCP+ IRKST+K + T + MF IS LGS V C W M LT+ VY Sbjct: 732 TPVIQTSCPICIRKSTNKQGIRFTNLQTKLNCMF*ISQNPLGSSPVFCCWSMQILTNFVY 553 Query: 1439 SKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQV 1618 +G IRS + QI++ T +TSV +++ RCSF F R S FT F + Sbjct: 552 *EG*IRSSQSQIMQGTNKTSVPCTINWSKRCSFISTQLF*DRQWSINCFTVTHINSF*HI 373 Query: 1619 CCIFFLR 1639 I LR Sbjct: 372 LSILLLR 352 Score = 141 bits (303), Expect = 1e-32 Identities = 84/230 (36%), Positives = 121/230 (52%) Frame = -2 / +3 Query: 1589 L*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTC 1410 L*+ +S + RK RNT S Y +Q S C ++FD T*++L KQ + V C Sbjct: 402 L*SS*YSTVYLRKVECL*RNTSWTS**YMVQKSCWCPALFDFD*T*FILLSKQSLSVSAC 581 Query: 1409 TNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFW 1230 +N+ +L CQ S+I +TY+ W + + F C CFF* RLGRM *Q FN C ++ Sbjct: 582 SNNRTLGCCQEDSEISKTYS*AWFEDW*I*FLAC*CFF*CRLGRMSG*QAFNWRFCRVYR 761 Query: 1229 T*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWS 1050 T S M C TS+C I +R R+ T KC+ * ++ A G *+ +V*Q W Sbjct: 762 TQSCIMECT*TSYCV*IQYRSRI*STGKCYC*DYVDTNFAS*TGDSGA*NC*GMV*QYWC 941 Query: 1049 HILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 ++ + C KA+* R S C R SC + +Y + SSC W+Y++ Sbjct: 942 NLYDS*PCVLCSYKAY*GRLSLCSRTSCAEAVAG*IYIY**SSCRWIYQN 1091 Score = 93.2 bits (197), Expect(2) = 5e-23 Identities = 76/194 (39%), Positives = 99/194 (51%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K++M + * L V L L QK+ + KEHL Q + T+V V I* D Sbjct: 356 KRSMLRMC*NELI*VTVKQLILHCLSQKS*VLMKEHLLDQLIVHGTEVLLVPCII*L*LD 535 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQD 1276 LI P *T+ VS M Q Q T LP *D+*NI+ LV* + + L VLFL+Q GQD Sbjct: 536 LIYPSQ*TKFVSICMLQQQNTGLLPRGF*DI*NIQLSLV*RLVNLIPCLLVLFLMQIGQD 715 Query: 1275 A*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV 1096 MT VQ L D I +HG+ NK L D +Q +H +M L+ G C +W Sbjct: 716 VWMTGVQLEVLPCL*DPILYHGVHVNKLLCLDPVQKQNIKHWKMLLLRLCGYKLCFMNWG 895 Query: 1095 *KALRLPVSGVTML 1054 + L+L GVT+L Sbjct: 896 FRCLKLLRYGVTIL 937 Score = 35.9 bits (72), Expect(2) = 5e-23 Identities = 23/56 (41%), Positives = 30/56 (53%) Frame = -1 / +2 Query: 1023 FMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST 856 FML QS LR* L E EL+ + +++ IKL M L KL + + S II T Sbjct: 968 FMLVQSILR*TITLFENELRRSCCRLNIYLLMIKL*MDLPKL*LSNR*RCSEII*T 1135 Score = 34.5 bits (69), Expect(2) = 1e-04 Identities = 20/49 (40%), Positives = 23/49 (46%) Frame = +1 / -3 Query: 1354 YVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDIC 1500 YV I +WQ S L L H T+ CL +R QV SN H D C Sbjct: 637 YVLDISESSWQQPSVLLLEHADTDKLCLLRRINQV*SKSNNAGHQQDFC 491 Score = 31.8 bits (63), Expect(2) = 1e-04 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = +1 / -3 Query: 1189 QWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 Q LV+ +M D V Q LN CH ILP+L+ KKH Q Sbjct: 802 Q*LVYVHSMIQDWVL*TRQNLQLNACHPDILPNLHQKKH*Q 680
>LOC_Os03g50180:12003.t04361:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6179 Score = 432 bits (938), Expect = e-120 Identities = 181/272 (66%), Positives = 222/272 (81%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+Q+KYATDL+KK G+ CKP TPLS +EKLSL EG+ + D T+Y +VGALQ Sbjct: 5363 NGIVLTQDKYATDLLKKVGMLNCKPATTPLSVSEKLSLHEGSLLGPNDATQYISIVGALQ 5542 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F+VNKVC*FLHAPTTVH+TA KRI+RY+K ++GLN +S STLVS FS Sbjct: 5543 YLTLTRPDIAFSVNKVC*FLHAPTTVHWTAVKRILRYIKQCTSMGLNIDRSGSTLVSGFS 5722 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG +DDR+STGGFA+F G NL+SW+ARKQATVSRSS E+ YKA+ANATAE++WVQ+ Sbjct: 5723 DADWAGSVDDRKSTGGFAVFIGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQT 5902 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L ELGIKS + CDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 5903 LLAELGIKSPRAAKI*CDNLGAKYLSANSVFHARTKHIEVDYHFVRERVSQKLLEIDFVS 6082 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*L 839 S DQVADGFTK L + E+FK NLNL +L*L Sbjct: 6083 SGDQVADGFTKPLSVRLLENFKSNLNLKRL*L 6178 Score = 281 bits (607), Expect = 1e-74 Identities = 147/268 (54%), Positives = 165/268 (61%) Frame = +3 / -3 Query: 840 NHNFIXXXXXXXXXXXXVRKAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA 1019 NHN + VNPSAT*S E +S + T S TK* S S+CFVLA Sbjct: 6177 NHNRLRLRLLLKFSSSRTDNGLVNPSAT*SPEETKSISSNF*LTRSLTK**STSICFVLA 5998 Query: 1020 *KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVAC 1199 *KT ADKY+AP LSHQ L IPNS + CTH+ SAVAFA ALY S+LDLETVAC Sbjct: 5997 *KTEFADKYLAPRLSHQIFAARGLLIPNSANKVCTHIISAVAFAMALYSDSVLDLETVAC 5818 Query: 1200 FLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIR 1379 FLA H+ R P N A PPV+ LSS PAQS E LTSV+ DL PI CF YL I Sbjct: 5817 FLAFHDTRFEPMNTAKPPVDFLSSTLPAQSASENPLTSVDPDLSILSPILVHCFIYLNIL 5638 Query: 1380 LAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSV 1559 AV+ TVVGA +N*HTL T K ISGLV VKY APT +Y V S PS +D+FS+ Sbjct: 5637 FTAVQCTVVGA*RN*HTLLTEKAISGLVRVKYCNAPTILIYCVASLGPKRDPSCKDNFSL 5458 Query: 1560 LDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 DKGV GLQ P FF+KSVAY S* R Sbjct: 5457 TDKGVVAGLQFNIPTFFSKSVAYLS*VR 5374 Score = 73.5 bits (154), Expect(3) = 4e-26 Identities = 41/83 (49%), Positives = 49/83 (59%) Frame = +2 / -2 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F KPI NLI * NK N F+ + S K+ I L +LCSSMK+*I QV GS I+T Sbjct: 6115 FSKPICNLIT*RNKINF**FLTHPFSDKVIINLYMLCSSMKN*IC*QVFGSKIITSNLCC 5936 Query: 1082 LRAFYTQLL*HGLHPYDFSCGIC 1150 R QL * GL+P+ F C IC Sbjct: 5935 SRTLDPQLC**GLYPHYFCCCIC 5867 Score = 60.2 bits (125), Expect(3) = 4e-26 Identities = 37/109 (33%), Positives = 58/109 (53%) Frame = +2 / -2 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 +SGLFSS P*+ I + ++ K + SVI + P+ I +STHKC I + +F+I Sbjct: 5830 DSGLFSSIP*H*I*AYEHSKTSSGLSVIYTASPICI*ESTHKCGPRPVYIKPHTSTLFYI 5651 Query: 1367 SYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 S Y+ C ++C M +LTHL+ + I + IL T T + + Sbjct: 5650 SQYSFYCCPMHCCRSMKELTHLINRESYIWPSES*IL*CTNYTYILCCI 5504 Score = 23.5 bits (45), Expect(3) = 4e-26 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +1 / -1 Query: 1564 IKEWVWVYNLVGQAFLPSLLHIFLEKDEVH 1653 IKEW VYN L + H + E ++ H Sbjct: 5453 IKEW*QVYNSTSLPSLVNQ*HTYPE*EQCH 5364 Score = 111 bits (238), Expect = 1e-23 Identities = 66/170 (38%), Positives = 95/170 (55%) Frame = -2 / +1 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C +VF+++ Y C GVLV +C+ +S+L S + +I +T Y + ++QV +TCE Sbjct: 5533 CITVFNSH*ARYSFLC**GVLVPSCSYNSALDSSKKNIEIYKTVY*YGA*YRQVWVHTCE 5712 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 RLG R*Q + C + S M C*KTSHC ++ +R RVQ SKC+S +++ Sbjct: 5713 WILRCRLGWQCR*QKVHWRFCCVHRLKSSVMEC*KTSHCLKVKYRVRVQSHSKCNSRNNV 5892 Query: 1124 GAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 G VG ++ S L+* WS ILV + S SC*NKA+ S C R Sbjct: 5893 GTNLISRVGDQESSSSKDLM**SWSQILVSKFSFSC*NKAYRG*LSLCQR 6042 Score = 39.1 bits (79), Expect(3) = 2e-12 Identities = 27/74 (36%), Positives = 36/74 (48%) Frame = +1 / -1 Query: 1264 CHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQ 1443 CHL P+L+ + HSQV TC Y V +I ++ L + L H TNTP Q+ Sbjct: 5753 CHLHCQPNLHLRIHSQVWTQTCLY*APY*YTVLYISIFFLLLSNALL*EHEGTNTPY*QR 5574 Query: 1444 RRYQVL*VSNTEEH 1485 + Y * NT H Sbjct: 5573 KLYLA**ELNTVMH 5532 Score = 37.3 bits (75), Expect(3) = 2e-12 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +1 / -1 Query: 982 QNENLSQCALF*HERLDWQTSMWLQHCHTRN 1074 Q++N ALF*HE+L+ TS+WLQ H ++ Sbjct: 6035 QSDNQPLYALF*HEKLNLLTSIWLQDYHIKS 5943 Score = 33.6 bits (67), Expect(3) = 2e-12 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = +1 / -1 Query: 1099 PTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D 1224 PT L P L HLL CTL +QWLVF* +M D Sbjct: 5918 PTLLIRFVPTLFLLLHLLWLCTLTLYLTLRQWLVF*HSMTLD 5793 Score = 68.9 bits (144), Expect = 1e-10 Identities = 38/80 (47%), Positives = 44/80 (55%) Frame = -1 / +3 Query: 1215 HGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCL 1036 HG+LENKPL Q T+ *QM Q K G P *+SW + L V +LEP+TC Sbjct: 5802 HGMLENKPLSQGQVQSQSTKP*QMQQQK*CGYKPY*QSWGSRVLEQQRFDVIILEPNTCQ 5981 Query: 1035 PI*SFMLEQSTLR*IFILCE 976 I FMLEQS R I L E Sbjct: 5982 QIQFFMLEQSI*RLIITLSE 6041
>LOC_Os04g43720:12004.t03912:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5380 Score = 432 bits (937), Expect = e-120 Identities = 178/277 (64%), Positives = 215/277 (77%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 ++ +L LSQ KYAT+L+ + GL+ CKP TPL+ +EK S + G + D TKYR +VG Sbjct: 3553 SEGSLVLSQRKYATELISRAGLRNCKPVSTPLAVSEKFSSVGGVLLSEEDGTKYRSIVGG 3732 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPDI+FAVNK C +LH+PTT+H+TA KR++RYV TL GL +S ST +SA Sbjct: 3733 LQYLTLTRPDIAFAVNKACQYLHSPTTLHWTAVKRVLRYVSGTLTFGLKIGRSDSTTISA 3912 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 FS++DWAGC DDRRSTGGFAIF G NLISWSARKQATVSRSS EA YKALANATAEVIW+ Sbjct: 3913 FSDADWAGCSDDRRSTGGFAIFLGFNLISWSARKQATVSRSSTEAEYKALANATAEVIWI 4092 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 Q++LKELG+ K WCDN+GATYLSAN VFHARTKHIE+D+HFV ERV +LLDIRF Sbjct: 4093 QTLLKELGVSQPKAAVLWCDNIGATYLSANPVFHARTKHIEVDYHFVRERVVQRLLDIRF 4272 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKG 830 I S DQ+ADGFTKA F++NLNL ++ + G Sbjct: 4273 ISSGDQLADGFTKAQSLSKLRIFRNNLNLCEVMIEGG 4383 Score = 248 bits (537), Expect = 6e-65 Identities = 131/244 (53%), Positives = 149/244 (61%) Frame = +3 / -3 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 A V PSA *S E INR+S + T S TK* S SMC VLA* T LA++ VAP LSHQ Sbjct: 4313 ALVKPSAN*SPEDINRISNNRCTTRSLTK**STSMCLVLA*NTGLAER*VAPILSHQSTA 4134 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S S MTSAVA A+ALY AS+L+ ETVACFLA H+++L P+ IA PPVE Sbjct: 4133 AFGCDTPSSLSKV*IQMTSAVALANALYSASVLERETVACFLALHDIKLKPRKIAKPPVE 3954 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 RLSS HPAQS E AL VE DL FRP V TYL AV+ VVG CK *H LFT Sbjct: 3953 RLSSEHPAQSASENALIVVESDLPIFRPNVKVPLTYLKTLFTAVQCKVVGECKY*HALFT 3774 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 AK +SG V+VKY PT LY V S+ P ++FS GV GLQ P S Sbjct: 3773 AKAMSGRVNVKYCNPPTILLYFVPSSSLNSTPPTDENFSETASGVLTGLQFLNPALLINS 3594 Query: 1620 VAYF 1631 VAYF Sbjct: 3593 VAYF 3582 Score = 133 bits (284), Expect = 5e-30 Identities = 76/191 (39%), Positives = 108/191 (56%) Frame = +2 / -2 Query: 941 KPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGL 1120 KP++Q+ + N S+KM IY +V S MK + R++ +NIVTP+ SL Y++ L GL Sbjct: 4272 KPDIQQPLHNPFSNKMIIYFDVFSSGMKHRVSREISCTNIVTPKYCSLWL*YSKFLKQGL 4093 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRK 1300 +P DFS I *CLV C AR+GN LFS P* I +K+ K T *TS+I* SCP+ I + Sbjct: 4092 NPNDFSSSIS*CLVLCFCARAGNCSLFSCTP*Y*IETKENSKTTS*TSII*TSCPICI*E 3913 Query: 1301 STHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILK 1480 T+ + *T Q +IS +L V W +* LT ++ KG +R+ IL Sbjct: 3912 RTNSSGV*SSNF*TKCQSATNISQNSLYRRPVQSCW*V*ILTCFIHRKGYVRTS*R*IL* 3733 Query: 1481 STYQTSVFSSV 1513 T T + ++ Sbjct: 3732 PTNNTPILCTI 3700 Score = 95.0 bits (201), Expect(2) = 8e-27 Identities = 46/118 (38%), Positives = 68/118 (57%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++F+ +*+ LC + + +FT TN+ +L + +IC + + WSK ++ + C Sbjct: 3735 TIFNVNSS*HSLCGE*SMSIFTLTNNFALDGGKESFEIC*WHFDIWSKNWKIRLHYY*CV 3914 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 RLGRM R* TFN W C W + M C KTS+ F +*HR RVQG S C+ *SH+ Sbjct: 3915 LRCRLGRMFR**TFNWWFCYFPWFQFNIMECKKTSYSFPL*HRSRVQGIS*CYC*SHL 4088 Score = 46.9 bits (96), Expect(2) = 8e-27 Identities = 22/55 (40%), Positives = 29/55 (52%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 LV*Q W ++ +C +SC N H R SFC R C +G+ VY F S W + Sbjct: 4143 LV*QYWCNLSLC*PCVSCQN*THRSRLSFC*RTGCATVVGYPVYIFW*SISRWFH 4307 Score = 93.2 bits (197), Expect(2) = 2e-19 Identities = 54/120 (45%), Positives = 66/120 (55%) Frame = -1 / +2 Query: 1293 IQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNP 1114 +Q GQD M DVQ V L + L I +HG+ ENK FP LA +Q TRH* M LKS+G P Sbjct: 3920 MQIGQDVQMIDVQLVVLLFSLVSI*YHGVQENKLQFPALAQKQSTRH*LMLLLKSFGFKP 4099 Query: 1113 C*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFI 934 C R+ RL GVT+L L FM E +T +*I IL E L W GL++ Sbjct: 4100 CLRNLEYHNQRLQYFGVTILVQLISLLTLCFMPELNTSK*IIILLENGLCNGCWISGLYL 4279 Score = 23.5 bits (45), Expect(2) = 2e-19 Identities = 24/83 (28%), Positives = 39/83 (46%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K NMQ + L + N L L +K++ E+ *++ + + V V ++I* Sbjct: 3578 KGNMQLS*SVELG*GIANR*VLHLLFRKSFHR*VEYC*VKKMVQSIGVLLVGYNI*R*LV 3757 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQ 1387 L PL * + V+ Y HQ T + Sbjct: 3758 LT*PLR*IKHVNIYTHQQLCTGR 3826 Score = 78.5 bits (165), Expect = 1e-13 Identities = 53/133 (39%), Positives = 66/133 (49%) Frame = +1 / -1 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES* 1086 * H +D *T P Q L QN+NL +C F HE Q Q+CHT+ + Sbjct: 4306 *NHLLIDHQKI*TGYPTTVAQPVL*QNDNLLRCV*FWHETQG*QRDKLHQYCHTKVLQPL 4127 Query: 1087 SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVC 1266 + P A *LQ H L+PCTL C* K LVF +M +* Q Q H LNV Sbjct: 4126 VVILQVP*ARFESK*LQQ*H*LMPCTLLLC*SGKL*LVFLHSMILN*NQGK*QNHQLNVY 3947 Query: 1267 HLGILPSLN*KKH 1305 HL ILP+L+ + H Sbjct: 3946 HLNILPNLHLRTH 3908
>LOC_Os11g40860:12011.t03627:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4398 Score = 431 bits (935), Expect = e-120 Identities = 178/270 (65%), Positives = 219/270 (81%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N L L+Q KY +DL+K+ + CKP TPLS+TEKLSL EG + D T+YR +VGALQ Sbjct: 3583 NGLILTQGKYISDLLKRTNMADCKPVNTPLSTTEKLSLHEGDLLGPNDATQYRSIVGALQ 3762 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC*FLHAPTTVH TA KRI+RY+K+T ++G+ F++S TLVSAF+ Sbjct: 3763 YLTLTRPDISFSVNKVC*FLHAPTTVH*TAVKRILRYLKYTSSLGIKFNRSVFTLVSAFT 3942 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGCLDDRRSTGGFA++ G NL+SWSARKQATVSRSS EA YKALANATAEV+W+Q Sbjct: 3943 DADWAGCLDDRRSTGGFAVYLGSNLVSWSARKQATVSRSSTEAEYKALANATAEVMWIQR 4122 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L +LGI++ ++ WCDN+GA LSAN VFHARTKHIE+D+HFV E V NKLL++ +I Sbjct: 4123 LLNQLGIQAPRSAKIWCDNIGAKCLSANPVFHARTKHIEVDYHFVREHVLNKLLEVEYIS 4302 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 S DQVADGFTK L + E F++NLNL L Sbjct: 4303 SGDQVADGFTKPLAVKQLEMFRNNLNLRSL 4392 Score = 265 bits (573), Expect = 7e-70 Identities = 142/241 (58%), Positives = 160/241 (66%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 VNPSAT*S E I S SLF T S TK* S S+C V A*KT LADK++AP LSHQ L Sbjct: 4331 VNPSAT*SPEEIYSTSSSLFRTCSLTK**STSICLVRA*KTGLADKHLAPILSHQIFADL 4152 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 +P+ FS H+TSAVAFA+ALY AS+LDLETVACFLA H+ RL P+ ANPPV+R Sbjct: 4151 GA*MPS*FSSL*IHITSAVAFANALYSASVLDLETVACFLALHDTRLEPRYTANPPVDRR 3972 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SSR PAQS KALT V DLL P V F YL I L AV+*TVVGA +N* TL T Sbjct: 3971 SSRQPAQSASVKALTRVNTDLLNLIPKLDVYFRYLKILLTAVQ*TVVGA*RN*QTLLTEN 3792 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 +ISGLV VKY +APT LY V S PS RD+FSV+D+GV GLQ F KS Sbjct: 3791 DISGLVRVKYCKAPTMLLY*VASLGPSKSPSCRDNFSVVDRGVFTGLQSAIFVLFNKSDI 3612 Query: 1626 Y 1628 Y Sbjct: 3611 Y 3609 Score = 90.0 bits (190), Expect(2) = 1e-24 Identities = 49/138 (35%), Positives = 74/138 (53%) Frame = +2 / -1 Query: 1100 QLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*AS 1279 +L+* L+P+ SC IC*CLV C N LF P*+++ +K Y K +C +S+I + Sbjct: 4137 KLI*QPLNPHYLSCSIC*CLVFCFCTGP*NCSLFPCTP*HKVGAKIYSKSSCRSSIIKTT 3958 Query: 1280 CPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRS 1459 P+ I K T+K + + T R+F + + C VNC M KLT L+ + I Sbjct: 3957 SPICICKGTNKSKH*SIKFNTQT*RIF*VPQDSFNCCSVNCCRSMKKLTDLINRE*YIWP 3778 Query: 1460 CKCQILKSTYQTSVFSSV 1513 + IL+S Y S+ SS+ Sbjct: 3777 SQS*ILQSPYYASILSSI 3724 Score = 44.6 bits (91), Expect(2) = 1e-24 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTP 1069 F + IS LI N N+++ + N S K+ I+L + +SMK+ I Q GSNI+TP Sbjct: 4335 FSESISYLITGRNIFNLKQLVQNMFSDKVIIHLYMFSASMKNWIS*QTLGSNIITP 4168 Score = 77.6 bits (163), Expect(2) = 2e-19 Identities = 42/117 (35%), Positives = 61/117 (52%) Frame = -2 / +3 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 + Y+C C + RLG + * T R +C I W M C +TS+ F++ +R R+QG SK Sbjct: 3912 ISVYSC*CLYRCRLGWLS**STIYRRICCISWLQPCVMECKETSYSFKVQYRSRIQGISK 4091 Query: 1145 CHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVR 975 C+S* ++ + AK + S LV* WS + V SS SC + + S C R Sbjct: 4092 CYS*GNVDSEAAKSTWHSSTKVSENLV**YWSQVFVS*SSFSCSH*TYRGGLSLCQR 4262 Score = 39.6 bits (80), Expect(2) = 2e-19 Identities = 26/83 (31%), Positives = 45/83 (54%) Frame = -2 / +3 Query: 1592 RL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFT 1413 RL*T ++ I YRK +S R R Y + R +VF++ Y++ C G+LV + Sbjct: 3645 RL*TSKYTSINYRKVVST*R*FTRTQ*CYSV*KHSRGFAVFNSD*ARYIILC**GLLVSS 3824 Query: 1412 CTNHSSLHSCQAYSKICETYAEY 1344 C+ +SSL+S ++ + Y ++ Sbjct: 3825 CSYNSSLNSS*KNLEVPKIYVKF 3893 Score = 67.0 bits (140), Expect(2) = 5e-13 Identities = 65/176 (36%), Positives = 79/176 (44%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K N+ *K +++VN LY +QK+ L K * LL+ + * L SI* Sbjct: 3602 KVNIYLIC*KEQIWQIVNQ*IHLYQLQKSCLYMKVIY*DPMMLLSIEA**GLCSI*L*LG 3781 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQD 1276 I L R VSF+M QFT Q * *NIR + V L L V +Q G Sbjct: 3782 QIYHSLLIRSVSFFMLLQQFTEQQLKES*GT*NIRQVWVLNLIDQCLLLLVPLQMQIGLV 3961 Query: 1275 A*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC* 1108 M D Q L Y L HG+ NK F +Q TRH*QM QL+ G C* Sbjct: 3962 VLMIDDLQEDLLYILAPTLCHGVQGNKLQFQGPVQKQNTRH*QMLQLR*CGFRGC* 4129 Score = 28.1 bits (55), Expect(2) = 5e-13 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 GV +LEP C I FML + R I L E + +F+ I+ LM Sbjct: 4169 GVIILEPSVCQLIQFFMLALNI*RWIITLSENMF*TSCLRLNIFLPVIR*LM 4324
>LOC_Os09g13780:12009.t01167:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4309 Score = 427 bits (926), Expect = e-118 Identities = 172/267 (64%), Positives = 215/267 (80%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N L LSQ KY +DL+K+ + CKP TPLS+TEKLS+ EG + D T YR +VGALQ Sbjct: 3494 NGLMLSQGKYISDLLKRTNMSDCKPVNTPLSTTEKLSVHEGDLLGPHDATHYRSIVGALQ 3673 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLT PDI ++VNKVC FLHAPTTVH+ A KRI+RY+K+T ++GL F++S S VSAF+ Sbjct: 3674 YLTLTMPDIVYSVNKVCQFLHAPTTVHWAAVKRILRYLKYTSSLGLKFNRSSSLFVSAFT 3853 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 N+DWAGCLDDRRSTGGFA++ G NL+SWSARKQATVSRSS EA YKALANAT EV+W+Q+ Sbjct: 3854 NADWAGCLDDRRSTGGFAVYLGSNLVSWSARKQATVSRSSTEAEYKALANATVEVLWIQT 4033 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L+ELG+K+ ++ WCDN+GA +LSAN +FH RTKHIE+D+HFV ERV NKLL++ +I Sbjct: 4034 LLQELGVKAPRSAKIWCDNIGAKHLSANPMFHTRTKHIEVDYHFVRERVLNKLLEVEYIS 4213 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNL 854 S+DQVADGFTK L + E F+ NLNL Sbjct: 4214 SEDQVADGFTKPLPVKQLEMFRSNLNL 4294 Score = 250 bits (540), Expect = 2e-65 Identities = 133/244 (54%), Positives = 154/244 (63%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*S E I S +LF T S TK* S S+CFV * ADK +AP LSHQ Sbjct: 4251 RGLVNPSAT*SSEEIYSTSSNLFRTRSRTK**STSICFVRV*NIGFADKCLAPILSHQIF 4072 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L P+S + H TS VAFASALY AS+LDL+TVACFLA H+ RL P+ A PPV Sbjct: 4071 ADLGALTPSSCNKV*IHNTSTVAFASALYSASVLDLDTVACFLALHDTRLEPR*TAKPPV 3892 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 +RLSSRHPAQS KALT+ + DLL F+P V F Y I A +*TVVGAC+N* TLF Sbjct: 3891 DRLSSRHPAQSAFVKALTNRDEDLLNFKPRLDVYFRYRKILFTAAQ*TVVGACRN*QTLF 3712 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T ISG+V V+Y APT L V S PS D+FSV+DKGV GLQ F+K Sbjct: 3711 TE*TISGMVKVRYCNAPTILL*CVAS*GPNKSPS*TDNFSVVDKGVFTGLQSLIFVLFSK 3532 Query: 1617 SVAY 1628 S Y Sbjct: 3531 SDIY 3520 Score = 68.4 bits (143), Expect(3) = 2e-26 Identities = 36/74 (48%), Positives = 46/74 (62%) Frame = +2 / -1 Query: 1097 TQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*A 1276 T+ L* GL+P C IC C V L AR G+S LFS P*+++R+K CK + VI* Sbjct: 4051 TKFL*QGLNPQYLYCCICQCFVFSLRARPGHSCLFSCTP*HKVRAKINCKTSSRPPVI*T 3872 Query: 1277 SCPV*IRKSTHKCR 1318 S P+ I KST+K R Sbjct: 3871 SSPICICKSTNKQR 3830 Score = 56.1 bits (116), Expect(3) = 2e-26 Identities = 28/57 (49%), Positives = 40/57 (70%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F +PIS+LIF* N + + I N+LS+KM I+ N+ C+SMK I Q+ SNI+TP+ Sbjct: 4246 FGEPISHLIF*GNIFHFK*LIQNTLSNKMIIHFNMFCTSMKHWIC*QMFSSNIITPD 4076 Score = 33.6 bits (67), Expect(3) = 2e-26 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = +2 / -1 Query: 1394 VNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFC 1558 VNC M*KLT+ ++ IR + Q+L Y TS+ S+ + S FC Sbjct: 3754 VNCCRSM*KLTNFIHRINYIRHGQSQVL*CPYYTSIMRSIMRTQQISLMN*QLFC 3590 Score = 96.4 bits (204), Expect(2) = 7e-20 Identities = 62/155 (40%), Positives = 81/155 (52%) Frame = -1 / +3 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L VL +Q G D *MT LQ+ L L HG+ ENK L P LA R T+H QM Q Sbjct: 3831 LCLLVLLQMQIGLDV*MTGGLLEVLQFILALTLCHGVQENKQLCPGLARRLNTKHWQMQQ 4010 Query: 1137 LKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQIN 958 + G PC ++ V + SGV +LE + C I F+L Q+ L+ I IL E I+ Sbjct: 4011 *RYCGFRPCYKNLVLRRQGQQKSGVIILELNICQQIQCFILVQNILKWIIILFESVF*IS 4190 Query: 957 SWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST* 853 + +F QKIK LMG L++ + S I T* Sbjct: 4191 YLKWNIFPQKIKWLMGSPNLFLLNSSRCSEAILT* 4295 Score = 22.1 bits (42), Expect(2) = 7e-20 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -1 / +3 Query: 1443 LL*TRCVSFYMHQPQFT 1393 +L* + VSFYM QFT Sbjct: 3705 IL*IKFVSFYMLLQQFT 3755 Score = 74.8 bits (157), Expect(2) = 1e-18 Identities = 39/105 (37%), Positives = 55/105 (52%) Frame = -2 / +1 Query: 1451 YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMP 1272 Y L C+ + V TC+ +SSL + + + Y + K + C CF+ RLG M Sbjct: 3697 YSLFCE*SLSVSTCSYNSSLGCSKKDLTVSKVYIKSRLKI**IFISVC*CFYKCRLGWMS 3876 Query: 1271 R*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS 1137 R*Q C++ W * M C KTS+C Q+*H G +Q T KC+S Sbjct: 3877 R*QAVYWRFCSLSWL*PCVMECKKTSNCVQV*HGG*IQSTGKCNS 4011 Score = 39.6 bits (80), Expect(2) = 1e-18 Identities = 22/57 (38%), Positives = 32/57 (56%) Frame = -2 / +1 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 LV* WS V +S++S K +* SFC R +* +Y +RSS *WV+++ Sbjct: 4078 LV**YWS*TFVSKSNVSYSYKTY*SGLSFCSRACSE*VT*SGIYFLRRSSG*WVHQT 4248 Score = 46.9 bits (96), Expect(2) = 1e-12 Identities = 24/55 (43%), Positives = 33/55 (60%) Frame = +1 / -3 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTR 1071 *THQ LDLL + Y + +L QN+N Q L+ +E LD T++ LQ+ HTR Sbjct: 4241 *THQPLDLLRKYIPLQVTYSEHALEQNDNPLQYVLYEYETLDLLTNV*LQYYHTR 4077 Score = 46.9 bits (96), Expect(2) = 1e-12 Identities = 27/58 (46%), Positives = 30/58 (51%) Frame = +1 / -3 Query: 1138 LWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 L HL V C P C* W Q LVF +M * Q LQ CHL I P+L+ KH Q Sbjct: 4010 LLHLPVLCIQPPC*TWTQLLVFLHSMTQG*SQDKLQNLQ*TACHLDIQPNLHL*KH*Q 3837
>LOC_Os08g17420:12008.t01612:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4394 Score = 426 bits (925), Expect = e-118 Identities = 177/265 (66%), Positives = 213/265 (80%) Frame = -3 / +3 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYL 1469 L LSQ +YA+D++K+ G+ CKP TPLS+TEKLS+ +G + D + YR +VGALQYL Sbjct: 3594 LVLSQARYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYL 3773 Query: 1468 TLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNS 1289 TLTRPD+SF+VNKVC FLH+PTTVH++A KRI+RY+K T+ GL F KS S L+SAFS++ Sbjct: 3774 TLTRPDLSFSVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDA 3953 Query: 1288 DWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSML 1109 DWAGC DDRRSTGGFA+F GPNLISWSARKQATVSRSS EA YKALANATAEV+W++ +L Sbjct: 3954 DWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATAEVMWLRKIL 4133 Query: 1108 KELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSK 929 EL I WCDN+GATYLSAN VFHARTKHIEI +HFV E+VA KLLDIRFI + Sbjct: 4134 DELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIYYHFVREQVAKKLLDIRFISTT 4313 Query: 928 DQVADGFTKALRTQSFEDFKHNLNL 854 D++ADGFTK+L S F+HNLNL Sbjct: 4314 DKLADGFTKSLPAPSLAQFRHNLNL 4388 Score = 230 bits (496), Expect(2) = 2e-63 Identities = 117/195 (60%), Positives = 132/195 (67%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSA+ S INR+S S FAT S TK* ISMCFVLA*KT LADK VAP LSH Sbjct: 4336 VKPSASLSVVDINRISSSFFATCSLTK***ISMCFVLA*KTGLADK*VAPKLSHHNCATE 4157 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L I NS + H+TSAVA A ALY AS+LDLETVACFLA E++LGPK A PPV+ L Sbjct: 4156 GLAILNSSKIFLNHITSAVALAKALYSASVLDLETVACFLALQEIKLGPKKTAKPPVDLL 3977 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS PAQS EKAL S+E DL P +V F YL IR A + TVVG C+N* TLFT Sbjct: 3976 SSEQPAQSASEKALISIESDLPNLSPNSTVPFIYLKIRFTADQCTVVGLCRN*QTLFTEN 3797 Query: 1446 EISGLVSVKY*RAPT 1490 + SGLV V+Y +APT Sbjct: 3796 DKSGLVRVRYCKAPT 3752 Score = 34.5 bits (69), Expect(2) = 2e-63 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 PS D+FSV+DKGV GLQ P S AY + Sbjct: 3709 PSSIDNFSVVDKGVLAGLQIDIPALLRISEAYLA 3608 Score = 140 bits (301), Expect = 2e-32 Identities = 89/241 (36%), Positives = 130/241 (53%) Frame = +2 / -1 Query: 848 LYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD 1027 L QVEI+ ++ T F + IS LI K ++ + N LSHKM I LNVLC MKD Sbjct: 4394 LAQVEIVSKLC*TRRRQGFSETIS*LICCRYKSYIK*LLRNLLSHKMIINLNVLCPCMKD 4215 Query: 1028 *IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 I + S I+TP+ R+ +Q + + P++F I * + C RS N LFSS Sbjct: 4214 WIS**ISSSQIITPQLCYRRSCNSQFIQNFP*PHNFCRSIS*GFILCFSTRSRNRSLFSS 4035 Query: 1208 RP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGS 1387 P N +R+++ CK +C +S+I + PV IRKST+K R L + + F+I + Sbjct: 4034 TPRN*VRTQENCKTSCRSSIIRTTSPVSIRKSTNKHRIRLTKSKSKFHSPFYIP*NSFYC 3855 Query: 1388 CEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR* 1567 ++C M*KLT LVY + + S + +IL+S Y S+ +S+ S R FF +R* Sbjct: 3854 *PMHCSRTM*KLTDLVY*E**VWSSQSEILQSPYNASIMTSIILSQEISIFNRQFFSSR* 3675 Query: 1568 R 1570 R Sbjct: 3674 R 3672 Score = 51.0 bits (105), Expect(2) = 7e-15 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = -2 / +2 Query: 1079 SLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 S +V* S++ + SSLSC +KAH*D SFC R SC+ +++Y + R + *W + Sbjct: 4163 STIVV**FGSYLFIS*SSLSCKDKAH*DLLSFCERASCEEAT*YTIYIYNR*AS*WFH 4336 Score = 50.6 bits (104), Expect(2) = 7e-15 Identities = 35/108 (32%), Positives = 56/108 (51%) Frame = -2 / +2 Query: 1448 LLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR 1269 ++ KQG+ + T + +S+L S + K+ + W+ V FY CFF* LG + Sbjct: 3794 IILSKQGLSIST*SYYSALVSSKTNFKVYKRDCGIWT*IW*V*FYAY*CFF*C*LGWLF* 3973 Query: 1268 *QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 * R C+ +* +F+ C*KT + F I*+ RV S C+ S++ Sbjct: 3974 **KIYRRFCSFLGS*LNFLEC*KTGYGF*I*Y*SRV*SLS*CYGRSYV 4117 Score = 36.8 bits (74), Expect(2) = 9e-06 Identities = 27/68 (39%), Positives = 36/68 (52%) Frame = -1 / +1 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 S +L L VLFL+ TG M + Q LQ+ L F G+LEN+ F DL +Q + * Sbjct: 3916 SLILCLLVLFLMLTGLVVLMIEDLQEVLQFSWVLT*FLGVLENRLRFLDLVLKQSIKP*L 4095 Query: 1146 MPQLKSYG 1123 M + K G Sbjct: 4096 MLRQKLCG 4119 Score = 33.6 bits (67), Expect(2) = 9e-06 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = -1 / +1 Query: 1026 SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 SFM QSTLR I IL E +L+ + + L++Q+I LM Sbjct: 4216 SFMQGQSTLRFIIIL*ESKLRRSYLIYDLYLQQIS*LM 4329 Score = 41.4 bits (84), Expect = 0.019 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +1 / -3 Query: 967 QLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 QL+L+QN+N SQCAL HERLD + L + HT Sbjct: 4275 QLALSQNDNKSQCALSLHERLD*LINK*LPNYHT 4174
>LOC_Os03g44240:12003.t03812:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4361 Score = 426 bits (924), Expect = e-118 Identities = 172/267 (64%), Positives = 217/267 (81%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA+DL+K+ G+ CKP TP+S+TEK+S+ G+ + D T+YR +VGALQYLTL Sbjct: 3561 LTQEKYASDLLKRAGMSDCKPVATPMSNTEKMSVHSGSVLGEHDATRYRSIVGALQYLTL 3740 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISF++NKVC FLH+PTT H+ A KRI+RY+K ++ +GL ++S STLVSAFS++DW Sbjct: 3741 TRPDISFSINKVCQFLHSPTTQHWMAVKRILRYIKSSVGLGLKINRSSSTLVSAFSDADW 3920 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGFA+F G NL+SWSARK ATV RSS EA YKA+ANATAEV+W+Q +L+E Sbjct: 3921 AGSVDDRRSTGGFAVFLGSNLVSWSARK*ATVYRSSTEAEYKAVANATAEVMWIQILLQE 4100 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 +G++ T WCDN+GATYLS N VFHARTKHIE+D+HFV ERVA K L+I+FI S DQ Sbjct: 4101 IGVQVPSTAKLWCDNLGATYLSVNPVFHARTKHIEVDYHFVRERVARKQLEIKFISSGDQ 4280 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTK + Q DF++NLNL KL* Sbjct: 4281 VADGFTKPISVQQLRDFRNNLNLDKL* 4361 Score = 257 bits (556), Expect = 1e-67 Identities = 141/244 (57%), Positives = 155/244 (63%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S E IN +S ATLS TK* S S+C VLA* T L D+YVAP LSH V Sbjct: 4297 VKPSAT*SPEDINFISSCFLATLSLTK**STSICLVLA*NTGLTDRYVAPKLSHHNLAVD 4118 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 P S S H+TSAVAFA+ALY AS+LDL TVA FLA H+ R PK ANPPV+ L Sbjct: 4117 GT*TPIS*SKI*IHITSAVAFATALYSASVLDL*TVAYFLALHDTRFDPKKTANPPVDLL 3938 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS PAQS EKALT VE DLL RP + YL I L A++ VVG CKN* TLF K Sbjct: 3937 SSTDPAQSASEKALTRVEEDLLILRPRPTEDLIYLKILLTAIQCCVVGLCKN*QTLFIEK 3758 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 EISG V VKY +APT LYLV S P D FSVLD GV GLQ P F++S A Sbjct: 3757 EISGRVKVKYCKAPTILLYLVASCSPRTEPL*TDIFSVLDIGVATGLQSDIPALFSRSEA 3578 Query: 1626 YFS* 1637 YFS* Sbjct: 3577 YFS* 3566 Score = 89.5 bits (189), Expect(3) = 2e-29 Identities = 51/109 (46%), Positives = 66/109 (60%) Frame = +2 / -1 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 N LFSS P* +I S+K CK TC*+SVI SCP+ IRKST+K RR + T R +I Sbjct: 4016 NCSLFSSTP*YQI*SQKDCKSTC*SSVIY*SCPICIRKSTNKSRRRPVNLKTKTNRRLNI 3837 Query: 1367 SYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 S L + G M*KLT+L+Y K +I S Q+L S+ TS+ S + Sbjct: 3836 SQNPLDCHPMLRGRTM*KLTNLIY*KRNIWSS*SQVL*SSNNTSISSCI 3690 Score = 56.5 bits (117), Expect(3) = 2e-29 Identities = 35/98 (35%), Positives = 49/98 (50%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+ ++ K L F K I +LI K +Q NS S+KM I+ +L S MK I Sbjct: 4346 VKIVSKISKLLNRDWFSKTICHLITRRYKFYLQLLPSNSFSNKMIIHFYMLSSGMKHRID 4167 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC 1150 Q+C S I+TP+ R L L+P+ C IC Sbjct: 4166 *QICSS*IITPQLSCRRNLNPNFLK*NLNPHYLCCSIC 4053 Score = 22.1 bits (42), Expect(3) = 2e-29 Identities = 11/24 (45%), Positives = 11/24 (45%) Frame = +1 / -3 Query: 1582 VYNLVGQAFLPSLLHIFLEKDEVH 1653 VYNL L HIFLE H Sbjct: 3621 VYNLTYLPSLVDQRHIFLELTRYH 3550 Score = 122 bits (261), Expect(2) = 5e-29 Identities = 73/191 (38%), Positives = 99/191 (51%) Frame = -2 / +2 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 +V D T Y K G+ VFT + H++L Q +I + WS QV FY+C CF Sbjct: 3725 TVLDFNSTRYFFFNK*GLSVFT*SYHAALDGSQEDFEIY*VFCWSWS*D*QVFFYSC*CF 3904 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 F* RLGR+ R*Q NRW+C++F S M C*K + + +R + SKC+S ++ + Sbjct: 3905 F*CRLGRISR*QKINRWICSLFGIKSGIMEC*KIGYSL*VKYRS*I*SGSKCYSRGNVDS 4084 Query: 1118 IHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVY 939 G DS +V* S+I V QS +SC N A+ SFC R+SC G +Y Sbjct: 4085 DFTSGNWGSSSVDS*VVV**FRSYISVSQSCVSCQN*AYRSGLSFC*RKSC*EATGDKIY 4264 Query: 938 SFKRSSC*WVY 906 F SS W Y Sbjct: 4265 IFW*SSGRWFY 4297 Score = 26.7 bits (52), Expect(2) = 5e-29 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 / +2 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTIS 1542 SRKIC K+ RL*T ++++ YR+ +S Sbjct: 3566 SRKICL*STKEGRYVRL*TCCYTYVQYRENVS 3661 Score = 61.1 bits (127), Expect(2) = 8e-14 Identities = 32/61 (52%), Positives = 39/61 (63%) Frame = -1 / +1 Query: 1320 LLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMP 1141 LL L VLFL+Q GQD *MT+ QQV LQ F D I +HG+LEN+ F + + *QM Sbjct: 3883 LLLLLVLFLMQIGQDQ*MTEDQQVDLQSFWDQIWYHGVLENRLQFIGQVQKLNIKR*QML 4062 Query: 1140 Q 1138 Q Sbjct: 4063 Q 4065 Score = 36.8 bits (74), Expect(2) = 8e-14 Identities = 26/72 (36%), Positives = 35/72 (48%) Frame = -1 / +1 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GV + E H C I FM E S + I IL E+EL ++W L++ IK M L + Sbjct: 4135 GVII*ELHICQSILCFMPELSI*KWIIILLEKELLGSNWR*NLYLLVIKWQMVLLNQSLF 4314 Query: 888 KVLKTSNIIST* 853 L+ I T* Sbjct: 4315 NSLEILETILT* 4350 Score = 54.7 bits (113), Expect = 2e-06 Identities = 28/49 (57%), Positives = 34/49 (69%) Frame = +1 / -3 Query: 1198 VF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQ 1344 +F* +M D + K LQ HLL CHL ILP+L+ KKH Q *K TC*+ DQ Sbjct: 4005 IF*HSMIPDLIPKRLQIHLLIFCHLLILPNLHQKKH*QE*KKTC*S*DQ 3859
>LOC_Os01g22110:12001.t01946:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2474 Score = 424 bits (921), Expect = e-118 Identities = 174/263 (66%), Positives = 214/263 (81%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ + CK TPLS++EKLS EGTP+ VD+T+YR LVGALQYLTL Sbjct: 1672 LTQEKYAKDVLKRVNMSDCKAVNTPLSTSEKLSAHEGTPLGPVDSTRYRSLVGALQYLTL 1851 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+S++VNKVC +LHA TT H+ A KRI+RY+KHT+ +GL SKS S LVSAFS++D Sbjct: 1852 TRPDLSYSVNKVCQYLHALTTDHWAATKRILRYLKHTIKLGLKISKSNSLLVSAFSDAD* 2031 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATAE++W+ ++L E Sbjct: 2032 AGCLDDRRSTGGFAVFIGPNLMSWSARKQATVSRSSTEAEYKALANATAEIMWIHALLHE 2211 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LG++ + WCDN+GA YLSAN VFHARTKHIE+D+HFV ERVA KLL + +I +KDQ Sbjct: 2212 LGVQVPRAAKVWCDNIGAKYLSANHVFHARTKHIEVDYHFVRERVARKLLQVEYISTKDQ 2391 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 VADGFTK L + F++NLNL Sbjct: 2392 VADGFTKTLTVKLLVMFRNNLNL 2460 Score = 278 bits (601), Expect = 9e-74 Identities = 144/243 (59%), Positives = 161/243 (66%) Frame = +3 / -1 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 VNPSAT*S I + AT S TK* S SMCFV A* T LADKY AP LSH L Sbjct: 2408 VNPSAT*SLVDIYSTCNNFRATRSRTK**STSMCFVRA*NT*LADKYFAPILSHHTLAAL 2229 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 P+S S C H+ SAVA A ALY AS+LDL+TVACF A H++RLGP N A PPVERL Sbjct: 2228 GT*TPSS*SKACIHIISAVALAKALYSASVLDLDTVACFRALHDIRLGPINTAKPPVERL 2049 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SSRHPA S EKALTS E DLL F+P VC YL I L A +*+VV ACK *HTLFT Sbjct: 2048 SSRHPA*SASEKALTSRELDLLIFKPSLIVCLRYLRILLVAAQ*SVVRACKY*HTLFTE* 1869 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 + SGLV V+Y +APTR LYLV+ST GVPS +FS +DKGV LQ F S+A Sbjct: 1868 DRSGLVKVRYCKAPTRLLYLVLSTGPRGVPS*ALNFSEVDKGVFTALQSLMFTLFNTSLA 1689 Query: 1626 YFS 1634 YFS Sbjct: 1688 YFS 1680 Score = 154 bits (330), Expect = 2e-36 Identities = 98/261 (37%), Positives = 140/261 (53%) Frame = +2 / -3 Query: 854 QVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*I 1033 +V I+ E ++ +* KPI NLI N+Q+ CN+LS+KM IY NV C+SMK I Sbjct: 2460 KV*IVSEHYQQFNS*CLGKPICNLILGGYILNLQQLPCNTLSNKMIIYFNVFCASMKHMI 2281 Query: 1034 GRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP 1213 + +NI+TP R + L+ ++P++FSCGI L+ C RSG SGL S P Sbjct: 2280 S**IFCTNIITPYLSCSRHLNS*LMK*SMYPHNFSCGISQSLIFCFCTRSGYSGLLSRTP 2101 Query: 1214 *NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCE 1393 *++I S K+ K + T +I SC + IR+ST+K L ++ T M IS LGS Sbjct: 2100 *HKIGSYKHSKTSSGTPIIQTSCLICIRESTNKQGIRLTDLQTKFNCMLEISQNPLGSSP 1921 Query: 1394 VNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RS 1573 + C M LT+ V+ I + QIL+ST +TSV +++ RC+F * F +R*RS Sbjct: 1920 MICC*SMQILTYFVH*IR*IWPSQSQILQSTNKTSVPCTINWSKRCTFMST*LF*SR*RS 1741 Query: 1574 GCGFTTL*ARLFYQVCCIFFL 1636 F + I FL Sbjct: 1740 VYSFAITHVYSL*HILSILFL 1678 Score = 103 bits (219), Expect(2) = 9e-31 Identities = 60/150 (40%), Positives = 81/150 (54%) Frame = -2 / +3 Query: 1574 HSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSS 1395 HSFI +RK R T S Y +Q S C ++ D +L +Q + VF C+N+ S Sbjct: 1740 HSFIYFRKVKCS*RYTSWTS**YKVQKSCWCFAISDFD*ARSILFSEQSMSVFACSNNRS 1919 Query: 1394 LHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHF 1215 L Q S+I + Y W + Q V F C CF * RLGRM * F+ C ++ T S+ Sbjct: 1920 LGCYQEDSEISQAYN*TWFEDQ*V*FPAC*CFL*CRLGRMSG**AFHWRFCCVYRTQSYV 2099 Query: 1214 MVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 M C K SHC QI*+R R+ G CHS*+++ Sbjct: 2100 MECAKASHCIQI*YRSRI*GFG*CHS*NYV 2189 Score = 51.9 bits (107), Expect(2) = 9e-31 Identities = 24/56 (42%), Positives = 31/56 (55%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 +V* W I + S +SC +K H* R SFC R C + VY + SSC WVY+ Sbjct: 2244 MV**YWCKIFIS*SCVSCSHKTH*SRLSFCSRACCTEVVAG*VYIHQGSSCRWVYQ 2411 Score = 78.5 bits (165), Expect(2) = 6e-19 Identities = 62/150 (41%), Positives = 79/150 (52%) Frame = -1 / +2 Query: 1572 LLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQFT 1393 LLYL+QK+ + K HL Q + T+V VL +I* I + *T+ VS M Q Sbjct: 1742 LLYLLQKS*VLMKVHLLDQLIVQGTEVLLVLCNI*L*LGQIYLIQ*TKYVSICML*QQII 1921 Query: 1392 SQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFH 1213 LP *D+ +I+ LV* S S + L VL L+Q QD M V L D I H Sbjct: 1922 GLLPRGF*DISSIQLNLV*RSVSLIPCLLVLSLMQIRQDVWMIGVPLEVLLCL*DPILCH 2101 Query: 1212 GLLENKPLFPDLASRQGTRH*QMPQLKSYG 1123 G+ E+KPL+PDL +Q R MPQLK G Sbjct: 2102 GVRESKPLYPDLVQKQNIRLWLMPQLKLCG 2191 Score = 36.8 bits (74), Expect(2) = 6e-19 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQK 901 GV +L + I FML Q+TL+*I IL E L + ++ +IKL MGL + Sbjct: 2246 GVIILVQNIYQLIMCFMLAQNTLK*IIILFESVLHGSCCRLSIYPPRIKLQMGLPR 2413 Score = 57.9 bits (120), Expect(2) = 2e-11 Identities = 39/102 (38%), Positives = 49/102 (48%) Frame = +1 / -2 Query: 1129 *LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHS 1308 * QLWH P L *IW QWL F +M *D V Q N H ILP+L+ +KH Sbjct: 2185 *FQLWH*PKPYILLLY*IWIQWLAFAHSMT*DWVL*TQQNLQWNAYHPDILPNLHQRKH* 2006 Query: 1309 QV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPC 1434 Q T *+ +Q Y I +W ++L L H T+ C Sbjct: 2005 QAGN*TY*SSNQV*LYA*DISESSW*QPNDLLLEHANTDILC 1880 Score = 31.8 bits (63), Expect(2) = 2e-11 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +1 / -2 Query: 964 LQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 +Q +L QN+NL QC L HE D ++ Q+ HT Sbjct: 2350 VQHALEQNDNLLQCVLCEHETHD*LINILHQYYHT 2246
>LOC_Os03g36610:12003.t03130:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2022 Score = 423 bits (919), Expect = e-117 Identities = 172/263 (65%), Positives = 213/263 (80%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ + CK TPLS + KLS EGTP+ VD+T+YR LVGALQYLTL Sbjct: 853 LAQEKYAKDVLKRVNMSDCKAVNTPLSIS*KLSAHEGTPLGPVDSTRYRNLVGALQYLTL 1032 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+SF+VNKVC +LHAPTT H+ AKRI+RY+KHT+ +GL SKS S LVSAFS++DW Sbjct: 1033 TRPDLSFSVNKVCQYLHAPTTEHWAVAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADW 1212 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDR STGGFA+F GPNL+SWSARKQATVS SS EA YKALANATA+++W+ ++L E Sbjct: 1213 AGCLDDRLSTGGFAVFIGPNLVSWSARKQATVSSSSTEAEYKALANATAKIMWI*TLLHE 1392 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LG+++ KT WCDN+GATY++AN +F ARTKHIE+D+HFV ERVA KLL + +I + DQ Sbjct: 1393 LGVQAPKTAKVWCDNIGATYMTANPMFRARTKHIEVDYHFVRERVARKLLQVEYISTNDQ 1572 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 VADGFTK L + E F+ NLNL Sbjct: 1573 VADGFTKTLTVKQLEMFRKNLNL 1641 Score = 263 bits (568), Expect = 3e-69 Identities = 136/246 (55%), Positives = 159/246 (64%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + VNPSAT*SF + + AT S TK* S S+CFV A LA YVAP LSH Sbjct: 1598 RVLVNPSAT*SFVDMYSTCNNFRATRSRTK**STSICFVRARNIGLAVIYVAPMLSHHTL 1419 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 VL PNS S H+ AVA A+ALY AS+L+L+TVAC A H+ RLGP N A PPV Sbjct: 1418 AVLGA*TPNS*SKVYIHIILAVALANALYSASVLELDTVACLRALHDTRLGPINTAKPPV 1239 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+HPAQS E ALTS E DLL F+P +VCF YL I LA + +VVGACK *HTLF Sbjct: 1238 DSLSSKHPAQSASENALTSKELDLLIFKPSLTVCFRYLRILLATAQCSVVGACKY*HTLF 1059 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K+ SGLV V+Y +APTR LYLV+ST GVPS +F +DKGV LQ F Sbjct: 1058 TEKDRSGLVRVRYCKAPTRFLYLVLSTGPRGVPS*ALNFYEIDKGVLTALQSLMLTRFNT 879 Query: 1617 SVAYFS 1634 S+AYFS Sbjct: 878 SLAYFS 861 Score = 150 bits (322), Expect = 3e-35 Identities = 85/224 (37%), Positives = 121/224 (54%) Frame = +2 / -1 Query: 965 CNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCG 1144 CNS S+KM ++ N+LC+S K I +C +N+VTP R +QL+ GL+P++ S Sbjct: 1530 CNSFSNKMIVHFNMLCTSTKHRISCHICCTNVVTPYLSCFRRLNSQLMK*GLYPHNLSSC 1351 Query: 1145 IC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRG 1324 I CL+ C + +S L + P*++I S K+ K + * VI SCP+ IRK T+K Sbjct: 1350 ISQCLIFCFCT*TRHSSLLTCTP*HKIGSYKHSKASS**PVIQTSCPICIRKRTNKQGVR 1171 Query: 1325 LAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVF 1504 +*T + M IS LG+ + C W M LT+ V+ K IRS + QIL+ST + S+ Sbjct: 1170 FTNL*TKLNCML*ISQNPLGNSPMFCCWSMQILTYFVH*KR*IRSSQSQILQSTNKVSIP 991 Query: 1505 SSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 ++H RC F * R*RS F F + IFFL Sbjct: 990 CTIHWSKRCPFMST*LL*DR*RSINSFAITHVNPF*HILSIFFL 859 Score = 115 bits (246), Expect = 8e-25 Identities = 75/224 (33%), Positives = 111/224 (49%) Frame = -2 / +3 Query: 1574 HSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSS 1395 +SFI K R+T SG Y + C ++ D+ T + +Q + VF C+N+ + Sbjct: 921 YSFIYLIKVKCS*RDTSWTSG*YKV*KPCWCFAISDSD*TGSIFFSEQSMSVFACSNNRT 1100 Query: 1394 LHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHF 1215 L CQ S+I + Y+ W K + C C F* RLGRM *Q N +C ++ T S Sbjct: 1101 LGCCQEDSEISKAYS*AWFKD**I*LLAC*CVF*CRLGRMFG*QAINWRLCCVYRTQSCV 1280 Query: 1214 MVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVC 1035 M C S+C +R R+ G C+ * ++ VG *+S +V*Q W +I Sbjct: 1281 MECT*ASYCV*FKYRSRI*GIG*CNC*DYVDIDLTS*VGSSSA*NS*GMV*QHWCNIYDS 1460 Query: 1034 QSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 S +SC KA+* SFC R SC + ++ K SSC W+++ Sbjct: 1461 *SYVSCSYKAY*SGLSFCSRTSCTEVVTGRIHIHK*SSCRWIHQ 1592 Score = 99.6 bits (211), Expect = 6e-20 Identities = 89/246 (36%), Positives = 113/246 (45%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 KKNM + * L + LLYL K+ + K HL QW + + VL +I* D Sbjct: 860 KKNMLRMC*NGLT*VIAKLLILLYLSHKS*VLMKGHLLDQWIVQGIETLLVLCNI*L*LD 1039 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQD 1276 I *T+ VS M Q Q LP *D+*+I+ LV* + L V FL+Q GQD Sbjct: 1040 RIYLFQ*TKYVSICMLQQQNIGLLPRGF*DI*SIQLSLV*RLVNLTPCLLVRFLMQIGQD 1219 Query: 1275 A*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV 1096 MT Q L D I HG+ +K L +Q RH M L+ G P SW Sbjct: 1220 VWMTGYQLEALLCL*DPILCHGVHVSKLLCLVQVQKQNIRHWLMQLLRLCGYRPYFMSWE 1399 Query: 1095 *KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLL 916 K L+ GVT L H I F+L QS L+ IL E EL + + + Q IKL Sbjct: 1400 FKRLKQLRYGVTTLVQHI*QLILCFVLVQSILKWTIILFENELHGSCYR*NTYPQMIKLQ 1579 Query: 915 MGLQKL 898 M +L Sbjct: 1580 MDSPRL 1597 Score = 37.7 bits (76), Expect(2) = 3e-05 Identities = 28/82 (34%), Positives = 38/82 (46%) Frame = +1 / -3 Query: 1189 QWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHI 1368 Q L + +M D V Q+ L CH ILP+L+ K H Q *+L+Q Y I Sbjct: 1306 Q*LAYVHSMTQDWVL*TQQSLQLIACHPNILPNLHQKTH*QARS*IY*SLNQA*LYALDI 1127 Query: 1369 LLYAWQL*SELWLVHVKTNTPC 1434 +WQ + L L H T+ C Sbjct: 1126 SESSWQQPNVLLLEHANTDILC 1061 Score = 30.9 bits (61), Expect(2) = 3e-05 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +1 / -3 Query: 964 LQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 +QL L QN++ Q AL+ HE D + M Q CHT Sbjct: 1531 VQLVLEQNDSPLQYALYEHET*D*LSYMLHQCCHT 1427
>LOC_Os09g29700:12009.t02648:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4875 Score = 423 bits (917), Expect = e-117 Identities = 177/275 (64%), Positives = 212/275 (77%) Frame = -3 / +3 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYL 1469 L LSQ+KYA +L+ + GL+ CKP TPLS +EK S G + D+T YR +VG LQYL Sbjct: 3483 LILSQKKYANELLNRAGLKECKPVNTPLSISEKFSASSGKLLSDKDSTNYRSVVGGLQYL 3662 Query: 1468 TLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNS 1289 TLTRPDI+FAVNK +LH PTT H+ A KRI+RY+ T++ L F+KS S +VS FS++ Sbjct: 3663 TLTRPDIAFAVNKARQYLHCPTTNHWIAVKRILRYISGTVDFRLRFTKSESNIVSGFSDA 3842 Query: 1288 DWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSML 1109 DWAGC DDRRSTGGFA+F+G NLISW+ARKQATVSRSS EA YKALANATAE+IWVQ++L Sbjct: 3843 DWAGCSDDRRSTGGFAVFYGSNLISWTARKQATVSRSSTEAEYKALANATAEIIWVQTLL 4022 Query: 1108 KELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSK 929 KELG+ K WC N+GATYLSAN VFHARTKHIE+D+HFV ERVA K L+IRFI S Sbjct: 4023 KELGVSQPKAALLWCGNIGATYLSANPVFHARTKHIEVDYHFVRERVAEKSLEIRFISSN 4202 Query: 928 DQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 DQ+ADGFTKA +F++NLNL KL*LR VK Sbjct: 4203 DQLADGFTKAQSLNKLNNFRNNLNLCKL*LRGSVK 4307 Score = 243 bits (525), Expect = 3e-63 Identities = 123/244 (50%), Positives = 149/244 (61%) Frame = +3 / -3 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 A V PSA+*SF+ INR+S AT S TK* S S+CFVLA* T A++YVAP L HQ Sbjct: 4231 ALVKPSAS*SFDEINRISSDFSATRSRTK**STSICFVLA*NTGFAERYVAPILPHQSNA 4052 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 P+S S CTH+ SAVAFA+ALY AS+LD +TVAC A HE++L P ANPPV+ Sbjct: 4051 AFG*ETPSSLSKVCTHIISAVAFANALYSASVLDRDTVACLRAVHEIKLEP*KTANPPVD 3872 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS PAQS EK LT + D + +V YL I A++* VVG CK * L T Sbjct: 3871 LLSSEQPAQSASEKPLTMFDSDFVNLNLKSTVPLIYLRILFTAIQ*LVVGQCKY*RALLT 3692 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 A ISG V+VKY*R PT L LV+S P ++FS ++ GV GL +P F S Sbjct: 3691 ANAISGRVNVKY*RPPTTLL*LVLSLSLNNFPEDAENFSDIESGVLTGLHSFKPARFNNS 3512 Query: 1620 VAYF 1631 AYF Sbjct: 3511 FAYF 3500 Score = 156 bits (336), Expect = 3e-37 Identities = 92/232 (39%), Positives = 134/232 (57%) Frame = +2 / -2 Query: 818 SLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIY 997 S+FNT P S L QV+I+ E+ + + F K IS LI * NKPN+ F+ ++LS+++ I Sbjct: 4313 SMFNTPPQS*LTQVKIVSEIIQLVQ*LGFGKTISKLII**NKPNL**FLSHTLSNEVIIN 4134 Query: 998 LNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDA 1177 L++ SMK I R++C SNI TP+ R ++LL L+PY+FSC I C + C Sbjct: 4133 LDMFRPSMKHWIRRKICSSNIATPKQCRFRLRNSKLLKQSLYPYNFSCSIRQCFIFCFCT 3954 Query: 1178 RSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRM 1357 RS + LF+S P*N+IR+ K K + +S+I + P+ IRK+T E *+ I Sbjct: 3953 RSRHCSLFTSSP*NQIRAIKNSKSSSRSSIIRTTSPICIRKTTDNV*F*FCES*SKIHGS 3774 Query: 1358 FHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 +IS L S + W M* LT V K IR+ +C +LK+T T V S++ Sbjct: 3773 TYIS*NPLHSYPMISCWTM*ILTSFVDCKRYIRTGQC*VLKTTNYTPVVSTI 3618 Score = 53.8 bits (111), Expect(3) = 3e-22 Identities = 29/68 (42%), Positives = 38/68 (55%) Frame = -1 / +1 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V+FL+Q G M + L +F+ LI FHGLL N+ DL +Q +H +M QLK Y Sbjct: 3826 VVFLMQIGLVVLMIEDLLEDLLFFMALI*FHGLLVNRLQCLDLVQKQNIKHWRMLQLKLY 4005 Query: 1125 GCNPC*RS 1102 G C RS Sbjct: 4006 GYKLCLRS 4029 Score = 52.8 bits (109), Expect(3) = 3e-22 Identities = 29/76 (38%), Positives = 42/76 (55%) Frame = -2 / +2 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y*+Q SSV + +*Y +C +Q VFT +N+ SL SC+ SKI + + K Sbjct: 3623 Y*LQECSWWSSVLNIDPS*YSVCSQQSSSVFTLSNN*SLDSCEEDSKIYKWNRGF*IKIH 3802 Query: 1328 QVPFYTCECFF*FRLG 1281 ++ C+ FF* RLG Sbjct: 3803 KIRIKHCQWFF*CRLG 3850 Score = 37.3 bits (75), Expect(3) = 3e-22 Identities = 25/56 (44%), Positives = 28/56 (50%) Frame = -1 / +1 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQK 901 GV +LE H L I FML ++ R I E N FGLF Q I LLM L K Sbjct: 4063 GVAILELHIFLRIQCFMLGRNISRLIITSFESVWLRNH*RFGLFHQMISLLMVLPK 4230 Score = 62.5 bits (130), Expect(2) = 4e-11 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = -2 / +2 Query: 1247 VCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFL 1068 +C W * FM C T + I*+R R+ +C+S*++MG A G + L Sbjct: 3884 ICCFLWL*FDFMDCS*TGYSVSI*YRSRI*SIGECYS*NYMGTNFA*GAWSFSTESGIAL 4063 Query: 1067 V*QCWSHILVCQSSLSC*NKAH 1002 V Q WS+I C+SS+SC*++ + Sbjct: 4064 VWQYWSYISFCESSVSC*DETY 4129 Score = 26.3 bits (51), Expect(2) = 4e-11 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2 / +2 Query: 947 SVYSFKRSSC*WVYKS 900 SVY K S+C*W Y+S Sbjct: 4184 SVYFIK*SAC*WFYQS 4231 Score = 53.3 bits (110), Expect = 5e-06 Identities = 33/83 (39%), Positives = 44/83 (53%) Frame = +1 / -1 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 V*H I T +S*D *+ L * HQQ D L +*TE + +L +++N + Sbjct: 4308 V*HSPSIITYTS*DCF*NYSTCSMTGLW*NHQQADHLMK*TESLVISQPHALERSDNQPR 4129 Query: 1003 CALF*HERLDWQTSMWLQHCHTR 1071 *HE LD Q M LQ+CHT+ Sbjct: 4128 YVSS*HETLDSQKDM*LQYCHTK 4060
>LOC_Os09g26970:12009.t02376:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8453 Score = 423 bits (917), Expect = e-117 Identities = 173/266 (65%), Positives = 210/266 (78%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 LSQEKY DL+K+ + CKP TPLS TEKLS+ +G + D T YR +VGALQYLTL Sbjct: 7650 LSQEKYVKDLLKRINMDKCKPVSTPLSPTEKLSIHQGDVLGPNDATNYRSIVGALQYLTL 7829 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISF+VNKVC +LH+PTTVH+ A KRI+RY++ T +GL KS S LVS FS++DW Sbjct: 7830 TRPDISFSVNKVCQYLHSPTTVHWAAVKRILRYLQQTSGLGLKIRKSSSLLVSGFSDADW 8009 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA++ GPNL+SWSARKQ TVSRSS EA YKALAN TAE++WVQ++LKE Sbjct: 8010 AGCLDDRRSTGGFAVYLGPNLVSWSARKQPTVSRSSTEAEYKALANVTAEIMWVQTLLKE 8189 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 + I+ KT WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I ++ S+DQ Sbjct: 8190 IKIEVPKTAKVWCDNIGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIEYVPSQDQ 8369 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL 845 VADGFTK L + F++NLNL L Sbjct: 8370 VADGFTKPLNEKQLAVFRYNLNLYGL 8447 Score = 239 bits (516), Expect(2) = 1e-62 Identities = 128/230 (55%), Positives = 142/230 (61%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 K FVNPSAT*S E +S + TLS TK* S S+C V A* T LA++Y AP LSH Sbjct: 8395 KGFVNPSAT*SCEGTYSISNNFLDTLSRTK**STSICLVRA*NTGLAERYFAPMLSHHTF 8216 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 V I SF+ CTHM SAV A ALY AS+LDL+TV C A + RLGPK A PPV Sbjct: 8215 AVFGTSILISFNRVCTHMISAVTLAKALYSASVLDLDTVGCLRALQDTRLGPK*TAKPPV 8036 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+ PAQS EK LTS E D L RP VC YL I L A +*TVVG CK * TL Sbjct: 8035 DLLSSKQPAQSASEKPLTSKEEDFLILRPSPDVCCKYLRILLTAAQ*TVVGECKY*QTLL 7856 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGL 1586 T KEISGLV VKY APT L LV S P +SFSV D+GV GL Sbjct: 7855 TEKEISGLVRVKYCNAPTMLL*LVASLGPRTSP*CIESFSVGDRGVLTGL 7706 Score = 22.6 bits (43), Expect(2) = 1e-62 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +1 / -3 Query: 1618 LLHIFLEKDEVH 1653 LLHIFLE E H Sbjct: 7674 LLHIFLEITEYH 7639 Score = 128 bits (274), Expect = 1e-28 Identities = 72/204 (35%), Positives = 108/204 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 FCK I NLI * N Q+F S ++KM +Y +L +SMK I R++ SN++TP Sbjct: 8390 FCKSICNLIL*RNILYFQQFPRYSFTNKMIVYFYMLSTSMKHRISREILCSNVITPYLCC 8211 Query: 1082 LRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*T 1261 FY L LHP+D SC I L+ C S + LF+ P ++IR + K T + Sbjct: 8210 FWYFYLDLFQQSLHPHDLSCDISQSLIFCFCT*S*HCRLFTCTPRHKIRPQINSKATSGS 8031 Query: 1262 SVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYS 1441 +I*A+CP+ IR++T K RR L+ + T + + IS L +NC W +* LT + Sbjct: 8030 PII*ATCPISIRETTDK*RRRLSYLKTKPRCLLQISQNPLDCSPMNCSWRV*VLTDFIN* 7851 Query: 1442 KGDIRSCKCQILKSTYQTSVFSSV 1513 + +I QIL+ + + S+ Sbjct: 7850 ERNIWPS*SQILQCSNYAPIIGSI 7779 Score = 78.0 bits (164), Expect(2) = 4e-23 Identities = 44/120 (36%), Positives = 66/120 (55%) Frame = -2 / +2 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++FD+ Y + V T +N+SSL Q S+I T WS ++V F+TC+ F Sbjct: 7814 AIFDSN*ARYFFLS**SLSVLTLSNYSSLGCSQEDSEIFATNIWAWS*DKKVFFFTCQWF 7993 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 * LGR+ R* + W+C +F *S + C T++ +I +R R+ G CHS* H+GA Sbjct: 7994 L*C*LGRLLR**EIHWWLCCLFGA*SCVLECT*TTYSVKIKYRSRI*GFG*CHS*DHVGA 8173 Score = 51.5 bits (106), Expect(2) = 4e-23 Identities = 23/52 (44%), Positives = 32/52 (61%) Frame = -2 / +2 Query: 1055 WSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 WS + +C S +SC A+ R SFC +S +G+ V SF RSSC W+YK+ Sbjct: 8237 WSKVSLC*SCVSCSY*AYRSRLSFCS*KSI*EIVGNRVCSFTRSSCRWIYKT 8392 Score = 70.7 bits (148), Expect = 3e-11 Identities = 54/141 (38%), Positives = 67/141 (47%) Frame = -1 / +1 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 S LL+L V+ L+ GQ A*M V L + LI G+ N D +Q R Sbjct: 7966 SLLLYLSVVSLMLIGQVA*MIGDPLVALLFIWGLILCLGVHVNNLQCQDQVQKQNIRLWL 8145 Query: 1146 MPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCEREL 967 M QL+S GC C*+ *K + GV LE L I FML S +* IL +E Sbjct: 8146 MSQLRSCGCKLC*KRSR*KYQKQQRYGVITLEQSISLLILCFMLVLSI*K*TIILFVKEY 8325 Query: 966 QINSWTFGLFIQKIKLLMGLQ 904 N W +F+ KIKL M LQ Sbjct: 8326 LGNCWK*SMFLHKIKLQMDLQ 8388 Score = 36.3 bits (73), Expect = 0.62 Identities = 23/57 (40%), Positives = 30/57 (52%) Frame = +1 / -3 Query: 898 KLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 ++L* H QLDL+ E T P + L QN++L A + HE D Q LQ HT Sbjct: 8394 RVL*IHLQLDLVKEHTLFPTIS*ILFHEQNDSLLLYA*YEHETQD*QRDTLLQCYHT 8224
>LOC_Os02g01050:12002.t00005:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4356 Score = 421 bits (914), Expect = e-117 Identities = 177/265 (66%), Positives = 210/265 (79%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYL 1469 L LSQ +YA+D++K+ G+ CKP TPLS+TEKLS+ +G + D + YR +VGALQYL Sbjct: 3556 LVLSQARYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYL 3735 Query: 1468 TLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNS 1289 TLTRPD+SF+VNKVC FLH+PTTVH+ A KRI+RY+K T+ GL F KS S L+SAFS++ Sbjct: 3736 TLTRPDLSFSVNKVCQFLHSPTTVHWLAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDA 3915 Query: 1288 DWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSML 1109 DWAGC DRRSTG FA+F GPNLISWSARKQATVSRSS EA YKALANATAEV+WV+ +L Sbjct: 3916 DWAGCSADRRSTGCFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATAEVMWVRKIL 4095 Query: 1108 KELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSK 929 EL I WCDN+GATYLSAN VFHARTKHIEID+HFV E+VA KLLDIRFI + Sbjct: 4096 DELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIRFISTI 4275 Query: 928 DQVADGFTKALRTQSFEDFKHNLNL 854 DQ+ADGF K+L S F+HNLNL Sbjct: 4276 DQLADGFIKSLPAPSLAQFRHNLNL 4350 Score = 232 bits (500), Expect(2) = 5e-64 Identities = 117/195 (60%), Positives = 134/195 (68%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 + PSA+*S INR+S S FAT S TK* SISMCFVLA*KT LADK VAP LSH Sbjct: 4298 MKPSAS*SIVDINRISSSFFATCSLTK**SISMCFVLA*KTGLADK*VAPKLSHHNCATE 4119 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L I NS + TH+TSAVA A ALY AS+LDLETVACFLA E++LGPK A PV+ L Sbjct: 4118 GLAILNSSKIFLTHITSAVALAKALYSASVLDLETVACFLALQEIKLGPKKTAKHPVDLL 3939 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 S+ PAQS EKAL S+E DL P +V F YL IR A + TVVG C+N* TLFT Sbjct: 3938 SAEQPAQSASEKALISIESDLPNLSPNSTVPFIYLKIRFTANQCTVVGLCRN*QTLFTEN 3759 Query: 1446 EISGLVSVKY*RAPT 1490 + SGLV V+Y +APT Sbjct: 3758 DKSGLVRVRYCKAPT 3714 Score = 34.5 bits (69), Expect(2) = 5e-64 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 PS D+FSV+DKGV GLQ P S AY + Sbjct: 3671 PSSIDNFSVVDKGVLAGLQIDIPALLRISEAYLA 3570 Score = 143 bits (306), Expect = 4e-33 Identities = 90/241 (37%), Positives = 132/241 (54%) Frame = +2 / -1 Query: 848 LYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD 1027 L QVEI+ ++ T F + IS LI+ K ++ + N LSHKM I LNVLC MKD Sbjct: 4356 LAQVEIVSKLC*TRRRQGFNETIS*LIYCRYKSYIK*LLRNLLSHKMIINLNVLCPCMKD 4177 Query: 1028 *IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 I + S I+TP+ R+ +Q + + +P++F I * L+ C RS N LFSS Sbjct: 4176 WIS**ISSSQIITPQLCYRRSCNSQFIQNFPYPHNFCRSIS*GLILCFSTRSRNRSLFSS 3997 Query: 1208 RP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGS 1387 P N +R+++ CK +C +S+ + PV IRKST+K R L + + F+I + Sbjct: 3996 TPRN*VRTQENCKTSCRSSISRTTSPVSIRKSTNKHRIRLTKSKSKFHSPFYIP*NSFYC 3817 Query: 1388 CEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR* 1567 ++C M*KLT LVY + I S + +IL+S Y S+ +S+ S R FF +R* Sbjct: 3816 *PMHCSRTM*KLTDLVY*E**IWSSQSEILQSPYNASIMTSIILS*EISIFNRQFFSSR* 3637 Query: 1568 R 1570 R Sbjct: 3636 R 3634 Score = 59.3 bits (123), Expect(2) = 3e-18 Identities = 38/112 (33%), Positives = 60/112 (53%) Frame = -2 / +3 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T +++ KQG+ + T + +S+L S + K+ + W+ V FY CFF* LG Sbjct: 3747 TRFIILSKQGLSIST*SYYSALVSSKTNFKVYKRDCGIWT*IW*V*FYAY*CFF*C*LGW 3926 Query: 1277 MPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 + * R C+ +* +F+ C*KT + F I*+ RV G S C+ S++G Sbjct: 3927 LFC**KIYRMFCSFLGS*LNFLEC*KTGYGF*I*Y*SRV*GLS*CYGRSYVG 4082 Score = 53.8 bits (111), Expect(2) = 3e-18 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = -2 / +3 Query: 1079 SLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 S +V* S++ + SSLSC +KAH*D SFC R SC+ +++Y + RS+ *W + Sbjct: 4125 STIVV**FGSYLFIS*SSLSCKDKAH*D*LSFCERASCEEAT*YTIYIYNRSAS*WFH 4298 Score = 36.3 bits (73), Expect(3) = 9e-07 Identities = 27/68 (39%), Positives = 36/68 (52%) Frame = -1 / +2 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 S +L L VLFL+ TG + + Q LQ+ L F G+LEN+ F DL +Q R * Sbjct: 3878 SLILCLLVLFLMLTGLVVLLIEDLQDVLQFSWVLT*FLGVLENRLRFLDLVLKQSIRP*L 4057 Query: 1146 MPQLKSYG 1123 M + K G Sbjct: 4058 MLRQKLCG 4081 Score = 31.3 bits (62), Expect(3) = 9e-07 Identities = 18/38 (47%), Positives = 24/38 (63%) Frame = -1 / +2 Query: 1026 SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 SFM QSTLR I IL E +L+ + + L++Q I LM Sbjct: 4178 SFMQGQSTLRLIIIL*ESKLRRSYLIYDLYLQ*IS*LM 4291 Score = 22.6 bits (43), Expect(3) = 9e-07 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = -1 / +2 Query: 1569 LYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYM 1411 LYL+ KN L E * + L+ + * L SI D I *TR V+FY+ Sbjct: 3635 LYLLLKNCLLKMEIS*DKMMLVIIEAL*GLCSISL*LDQIYHSQ*TRSVNFYI 3793 Score = 41.4 bits (84), Expect = 0.019 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +1 / -3 Query: 967 QLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 QL+L+QN+N SQCAL HERLD + L + HT Sbjct: 4237 QLALSQNDNQSQCALSLHERLD*LINK*LPNYHT 4136
>LOC_Os10g30510:12010.t02384:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4362 Score = 421 bits (913), Expect = e-117 Identities = 176/265 (66%), Positives = 209/265 (78%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYL 1469 L LSQ YA+D++K+ G+ CKP TPLS+TEKLS+ +G + D + YR +VGALQYL Sbjct: 3562 LVLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYL 3741 Query: 1468 TLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNS 1289 TLTR D+SF VNKVC FLH+PTTVH++A KRI+RY+K T+ GL F KS S L+SAFS++ Sbjct: 3742 TLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDA 3921 Query: 1288 DWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSML 1109 DWAGC DDRRSTGGFA+F GPNLISWSARKQATVSRSS EA YKALANAT EV WV+ +L Sbjct: 3922 DWAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKIL 4101 Query: 1108 KELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSK 929 EL I WCDN+GATYLSAN VFHARTKHIEID+HFV E+VA KLLDI+FI + Sbjct: 4102 DELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFVREQVAKKLLDIQFISTT 4281 Query: 928 DQVADGFTKALRTQSFEDFKHNLNL 854 DQ+ADGFTK+L S ++HNLNL Sbjct: 4282 DQLADGFTKSLPAPSLAQYRHNLNL 4356 Score = 229 bits (495), Expect(2) = 3e-63 Identities = 117/195 (60%), Positives = 132/195 (67%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSA+*S IN +S S FAT S TK* SISMCFVLA*KT LADK VAP LSH Sbjct: 4304 VKPSAS*SVVDINCISSSFFATCSLTK**SISMCFVLA*KTGLADK*VAPKLSHHNCATE 4125 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L I NS + TH+TS VA A ALY AS+LDLETVACFLA E++LGPK A PPV+ L Sbjct: 4124 GLAILNSSKIFLTHVTSVVALAKALYSASVLDLETVACFLALQEIKLGPKKTAKPPVDLL 3945 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS PAQS EKAL S+E DL P +V F YL IR A + TVVG C+N* TLFT Sbjct: 3944 SSEQPAQSASEKALISIESDLPNLSPNSTVPFIYLKIRFTADQCTVVGLCRN*QTLFTKN 3765 Query: 1446 EISGLVSVKY*RAPT 1490 + S LV V+Y +APT Sbjct: 3764 DKSDLVRVRYCKAPT 3720 Score = 34.1 bits (68), Expect(2) = 3e-63 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAY 1628 PS D+FSV+DKGV GLQ P S AY Sbjct: 3677 PSSIDNFSVVDKGVLAGLQIDIPALLRISEAY 3582 Score = 142 bits (304), Expect = 8e-33 Identities = 90/241 (37%), Positives = 130/241 (53%) Frame = +2 / -1 Query: 848 LYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD 1027 L QVEI+ + T F + IS LI K ++ + N LSHKM I LNVLC MKD Sbjct: 4362 LAQVEIVSILC*TRRRQGFSETIS*LICCRYKLYIK*LLRNLLSHKMIINLNVLCPCMKD 4183 Query: 1028 *IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 I + S I+TP+ R+ +Q + + +P +F I * L+ C RS N LFSS Sbjct: 4182 WIS**ISSSQIITPQLCYRRSCNSQFIQNFPYPRNFCRSIS*GLILCFSTRSRNRSLFSS 4003 Query: 1208 RP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGS 1387 P N +R+++ CK +C +S+I + PV IRKST+K R L + + F+I + Sbjct: 4002 TPRN*VRTQENCKTSCRSSIIRTTSPVSIRKSTNKHRIRLTKSKSKFHSPFYIP*NSFYC 3823 Query: 1388 CEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR* 1567 ++C M*KLT LVY + + S + +IL+S Y S+ +S+ S R FF +R* Sbjct: 3822 *PMHCSRTM*KLTDLVYQE**V*SSQSEILQSPYNASIMTSIILSQEISIFNRQFFSSR* 3643 Query: 1568 R 1570 R Sbjct: 3642 R 3640 Score = 55.1 bits (114), Expect(2) = 5e-17 Identities = 37/105 (35%), Positives = 56/105 (53%) Frame = -2 / +3 Query: 1436 KQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTF 1257 KQG+ + T + +S+L S + K+ + W+ V FY CFF* LG + * Sbjct: 3774 KQGLSIST*SYYSALVSSKTNFKVYKRDCGIWT*IW*V*FYAY*CFF*C*LGWLF***KI 3953 Query: 1256 NRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 R C+ +* +F+ C*KT + F I*+ RV G S C+ S++G Sbjct: 3954 YRRFCSFLGS*LNFLEC*KTGYGF*I*Y*SRV*GLS*CYDRSYVG 4088 Score = 53.8 bits (111), Expect(2) = 5e-17 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = -2 / +3 Query: 1079 SLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 S +V* S++ + SSLSC +KAH*D SFC R SC+ +++Y + RS+ *W + Sbjct: 4131 STIVV**FGSYLFIS*SSLSCKDKAH*D*LSFCERASCEEAT*YTIYIYNRSAS*WFH 4304 Score = 38.2 bits (77), Expect(2) = 3e-06 Identities = 28/68 (41%), Positives = 36/68 (52%) Frame = -1 / +2 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 S +L L VLFL+ TG M + Q LQ+ L F G+LEN+ F DL +Q R * Sbjct: 3884 SLILCLLVLFLMLTGLVVLMIEDLQEVLQFSWVLT*FLGVLENRLRFLDLVLKQSIRP*L 4063 Query: 1146 MPQLKSYG 1123 M + K G Sbjct: 4064 MLRQKLRG 4087 Score = 34.1 bits (68), Expect(2) = 3e-06 Identities = 18/38 (47%), Positives = 25/38 (65%) Frame = -1 / +2 Query: 1026 SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 SFM QSTLR I IL E +L+ + + L++Q+I LM Sbjct: 4184 SFMQGQSTLRLIIIL*ESKLRRSYLIYNLYLQQIS*LM 4297 Score = 41.4 bits (84), Expect(2) = 1e-04 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +1 / -3 Query: 967 QLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 QL+L+QN+N SQCAL HERLD + L + HT Sbjct: 4243 QLALSQNDNQSQCALSLHERLD*LINK*LPNYHT 4142 Score = 25.4 bits (49), Expect(2) = 1e-04 Identities = 25/61 (40%), Positives = 29/61 (47%) Frame = +1 / -3 Query: 1123 PI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KK 1302 P *L H L P TL + *I K VF* + K * + LQ L H PS + KK Sbjct: 4087 PT*LLS*H*LRPYTLLQY*I*KP*PVF*HSKKLS*DPRKLQNLL*IFYHQNNQPSQHQKK 3908 Query: 1303 H 1305 H Sbjct: 3907 H 3905
>LOC_Os03g06540:12003.t00521:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4347 Score = 420 bits (912), Expect = e-116 Identities = 175/267 (65%), Positives = 213/267 (79%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q+KY DL+++ + CKP TPLS++EKLS+ EG P+ D T YR +VGALQYLTL Sbjct: 3547 LTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTL 3726 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F VNKVC FLHAPTT H+ A KRI+RY+K +GL SKS S LVSA+S++DW Sbjct: 3727 TRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADW 3906 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGFA+F G NL+SWSARKQATVSRSS E+ YKALANATAE++WVQ++L E Sbjct: 3907 AGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAE 4086 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L ++S WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ + DQ Sbjct: 4087 LQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQ 4266 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTKAL + E+FK+NLNL KL* Sbjct: 4267 VADGFTKALSVRQLENFKYNLNLGKL* 4347 Score = 264 bits (571), Expect = 1e-69 Identities = 136/249 (54%), Positives = 159/249 (63%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KAFV PSAT*S +S + TLS TK* S SMC VLA* T LA++Y+AP LSH Sbjct: 4292 KAFVKPSAT*SPVGTKSISNNFLETLSRTK**STSMCLVLA*NTGLAERYLAPKLSHHNF 4113 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L NS + CTH+ SAVA A ALY S+LDLETVACF A H+ RL PKN A PPV Sbjct: 4112 AIDGLSTCNSANKVCTHIISAVALAKALYSDSVLDLETVACFRALHDTRLSPKNTAKPPV 3933 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSR PAQS E ALT+++ DLL P CF YL I L A + VVGACKN* TLF Sbjct: 3932 DLLSSREPAQSASE*ALTNIDLDLLNLSPSLVHCFKYLKILLTAAQWCVVGACKN*QTLF 3753 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K ISGLV+V+Y +APT L V S G PS D+FS++D+GV GLQ K Sbjct: 3752 TGKAISGLVNVRYCKAPTTLL*CVASFGPKGSPSFIDNFSLVDRGVLTGLQSNIFTLLNK 3573 Query: 1617 SVAYFS*ER 1643 S+ Y S* R Sbjct: 3572 SLTYLS*VR 3546 Score = 102 bits (218), Expect(2) = 3e-30 Identities = 59/149 (39%), Positives = 82/149 (55%) Frame = +2 / -1 Query: 1118 LHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IR 1297 L+P++ C I + L RS NS LF P*++I S +YCK +C + VI* + P+ I Sbjct: 4071 LYPHNLCCSISQSFIF*LCTRSRNSSLFPCTP*HKIIS*EYCKTSCRSPVI*GTSPICI* 3892 Query: 1298 KSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 ST+ R LA + + + IS +L SC + C W M*KLT+L+Y K +IR +C IL Sbjct: 3891 ISTY*HRSRLA*LKSKSSTLLQIS*NSLNSCPMVCSWSM*KLTNLIYRKSNIRPSQC*IL 3712 Query: 1478 KSTYQTSVFSSVH*IYRCSFHER*FFCTR 1564 ST TS+ + R SF R F R Sbjct: 3711 *STNYTSIMCCIIWS*RISFIYRQFLTCR 3625 Score = 50.6 bits (104), Expect(2) = 3e-30 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+ ++ + S CK I NLI +K N +F NS S+KM I L V S MK I Sbjct: 4332 VKIVLKILQLSN*QSLCKTICNLISCRHKINF*QFP*NSFSNKMIINLYVFSSGMKHRIS 4153 Query: 1037 RQVCGSNIVTPE 1072 R++ S I+TP+ Sbjct: 4152 RKILSS*IITPQ 4117 Score = 90.4 bits (191), Expect(2) = 2e-24 Identities = 48/121 (39%), Positives = 66/121 (54%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C +V + *Y CK G+ +FTC+N++ L SC KI E W+ +QV Y + Sbjct: 3705 CFTVSNID*A*YCFSCK*GLSIFTCSNYTPLGSC*ENFKIFEAMY*TWT*VKQV*IYVSK 3884 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 C F RLG PR*Q R C+I *S M C +TS+CF I*+R R+ C+S ++ Sbjct: 3885 CLFRCRLGWFPR*QEIYRRFCSILRR*SCVMECTETSYCF*I*YRVRI*SFG*CYSRDYV 4064 Query: 1124 G 1122 G Sbjct: 4065 G 4067 Score = 43.7 bits (89), Expect(2) = 2e-24 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = -2 / +3 Query: 1037 CQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSF 897 C S +SC N H SFC R+S K + + +++RSSC W YK F Sbjct: 4152 C*SCVSCQN*THRG*LSFCSRKSFKEIVRN*FCAYRRSSCRWFYKGF 4292 Score = 56.5 bits (117), Expect(2) = 3e-14 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +1 / -3 Query: 1177 *IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAY 1356 *I KQ LV +M D + +ILQ L CHLG P+L+ KH * TC Q Sbjct: 4012 *I*KQ*LVSVHSMTQDYLLRILQNLL*ISCHLGNQPNLHLNKHLLT*I*TCLT*VQV*YI 3833 Query: 1357 VSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 S+IL ++ QL + + L HVK + P LQ+++YQ + +T +H Sbjct: 3832 ASNILKFS*QLPNGV*LEHVKIDKPYLQEKQYQA*SMLDTVKH 3704 Score = 42.8 bits (87), Expect(2) = 3e-14 Identities = 29/74 (39%), Positives = 35/74 (47%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D *+ K L* H QLDLL + + L+L L QN+N C F HE Sbjct: 4342 TFLS*DCT*NSPTVELTKPL*NHLQLDLL*AQNQFLTISLKLFLEQNDNQPLCV*FWHET 4163 Query: 1027 LDWQTSMWLQHCHT 1068 D Q L + HT Sbjct: 4162 QD*QKDT*LLNYHT 4121 Score = 35.4 bits (71), Expect(2) = 4e-05 Identities = 22/51 (43%), Positives = 27/51 (52%) Frame = -1 / +2 Query: 1308 *VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTR 1156 *VL +Q G *MT Q LQY ++I HG+ NK LF DL Q + Sbjct: 3881 *VLIQMQIGLVP*MTGDLQEVLQYS*EIILCHGVHGNKLLFLDLVQSQNIK 4033 Score = 32.7 bits (65), Expect(2) = 4e-05 Identities = 26/57 (45%), Positives = 30/57 (52%) Frame = -1 / +2 Query: 1554 KNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQFTSQL 1384 +N L KE L* Q +V VL+SI*H LI L* R V+FYM Q QL Sbjct: 3635 RNCL*MKEIL*DQMMQHIIEV*LVLYSI*H*LGLILLFL*IRFVNFYMLQLHTIGQL 3805
>LOC_Os03g14410:12003.t01230:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4303 Score = 420 bits (911), Expect = e-116 Identities = 173/271 (63%), Positives = 214/271 (78%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+Q+KYA DL+++ + CKP TPLS++EKLS EG + +D T YR +VGALQ Sbjct: 3491 NGIILTQDKYACDLLRRVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQ 3670 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F VNKVC FLHAPTT+H+ A KRI+RY+KH +GL KS S LVSA+S Sbjct: 3671 YLTLTRPDIAFPVNKVCQFLHAPTTIHWVAVKRILRYLKHCTKLGLKLCKSKSMLVSAYS 3850 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG LDDRRSTGGFA+F G NL+SW ARKQATVSRSS E+ YKALANATAE++WVQ+ Sbjct: 3851 DADWAGSLDDRRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQT 4030 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L EL ++S WCDN+GA YLS+N VFH RTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4031 LLTELQVQSPPMAKLWCDNLGAKYLSSNPVFHTRTKHIEVDYHFVRERVSQKLLEIDFVP 4210 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 + DQVADGFTKAL + E+FKHNLNL +L* Sbjct: 4211 TGDQVADGFTKALPVRQLENFKHNLNLGRL* 4303 Score = 237 bits (511), Expect = 2e-61 Identities = 127/246 (51%), Positives = 149/246 (60%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KA V PSAT*S +S + TLS TK* S S+C VL *KT L ++Y+AP LSH Sbjct: 4248 KALVKPSAT*SPVGTKSISNNF*DTLSRTK**STSICLVLV*KTGLEERYLAPRLSHHNF 4069 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L NS + CTHM SAVA A ALY S+LDLETVACF A + RL P+ A PPV Sbjct: 4068 AIGGLCTCNSVNKVCTHMISAVALARALYSDSVLDLETVACFRAHQDTRLSPRKTAKPPV 3889 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSR PAQS E ALTS++ DL F P CF YL I L A +* VVGA +N* TL Sbjct: 3888 DLLSSRDPAQSASE*ALTSIDLDLHSFNPSLVQCFKYLKILLTATQ*IVVGA*RN*QTLL 3709 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K +SGLV V+Y RAPT L V S PS D+FS++D GV GLQ + Sbjct: 3708 TGKAMSGLVKVRYWRAPTTLL*FVASKGPSKSPS*ADNFSLVDNGVLTGLQSNIFTLLKR 3529 Query: 1617 SVAYFS 1634 S AY S Sbjct: 3528 SQAYLS 3511 Score = 100 bits (213), Expect(2) = 5e-29 Identities = 54/132 (40%), Positives = 73/132 (55%) Frame = +2 / -1 Query: 1118 LHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IR 1297 L+P+DF C I V R GN L P ++ S+K CK C*+S+I SCPV I Sbjct: 4027 LYPHDFCCSISKSFVF*FSTRPGNCSLLPCTPRYQVVSQKNCKTPC*SSIIKRSCPVCI* 3848 Query: 1298 KSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 ST+K R GLA + MF IS +L +N GWCM +LT+LV K ++ S + IL Sbjct: 3847 ISTNKHRLGLA*LQPKFSTMFQIS*DSLNCNPMNSGWCMKELTNLVNWKSNVWSSQG*IL 3668 Query: 1478 KSTYQTSVFSSV 1513 +ST TS+ + Sbjct: 3667 ESTNYTSIICCI 3632 Score = 48.7 bits (100), Expect(2) = 5e-29 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 VEI+ ++F S K ISNLI K N+ +F+ S S+KM + +L S MK+ I Sbjct: 4288 VEIVLKIF*LSNRQSLSKAISNLISCRYKINL*QFLRYSFSNKMIVNFYMLSSGMKNRIR 4109 Query: 1037 RQVCGSNIVTPE 1072 R++ S I+TP+ Sbjct: 4108 RKILSS*IITPQ 4073 Score = 96.8 bits (205), Expect = 4e-19 Identities = 77/197 (39%), Positives = 100/197 (50%) Frame = -1 / +3 Query: 1434 TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQ 1255 TR VS +MHQP F *D+*NI L * ASP L L VL +QTGQD M + Q Sbjct: 3711 TRFVSSFMHQPLFIGLQLRES*DI*NIVLNLG*SYASPSLCLLVLIQMQTGQDLLMIEDQ 3890 Query: 1254 QVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLP 1075 Q LQ+F + + G+ +K FP L Q T+ M Q KS G C*+++ K Sbjct: 3891 QGVLQFFWETTWYLGVHGSKLQFPGLVLNQNTKLLLMLQQKSCGYKLC*QNYKCKVHLWQ 4070 Query: 1074 VSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 GV + E L I F+ E S + IL E+E N L++Q+IKLLM L +L Sbjct: 4071 SCGVII*ELSIFLLILFFIPELSI*KLTIILFEKEYLKNC*RLILYLQEIKLLMALLRLC 4250 Query: 894 VHKVLKTSNIIST**SC 844 + K + IST* C Sbjct: 4251 LLDS*KILSTIST*EGC 4301 Score = 75.8 bits (159), Expect(2) = 1e-16 Identities = 44/121 (36%), Positives = 61/121 (50%) Frame = -2 / +1 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 CS V + T + QG+ V +CTNH SL KI ET W + QV Y C Sbjct: 3661 CSPVSNLD*TRHCFSS*QGLSVPSCTNHYSLGCS*ENLKIFETLY*TWVEAMQVQVYAC* 3840 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 C F RLGR+ * NR C+ +VC + S+ FQ+*+ R+Q + C+S +H+ Sbjct: 3841 CLFRCRLGRIS***KINRGFCSFSGRQPGILVCTEASYSFQV*Y*IRIQSSC*CYSRNHV 4020 Query: 1124 G 1122 G Sbjct: 4021 G 4023 Score = 31.8 bits (63), Expect(2) = 1e-16 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -2 / +1 Query: 1031 SSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSF 897 S S N A+ SFC R+S + +++RSSC*W+Y F Sbjct: 4114 SCFSYQN*AYRS*LSFCSRKSISKIVRD*FCTYRRSSC*WLY*GF 4248 Score = 49.6 bits (102), Expect(2) = 1e-06 Identities = 33/82 (40%), Positives = 43/82 (52%) Frame = +1 / -3 Query: 1240 LQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVK 1419 LQ LL H ILPSL+ KH Q * TC Q VS+IL ++ +E WLVH Sbjct: 3905 LQNPLLIFYHQEILPSLHLNKH*QA*TWTCIASTQV*YNVSNILRFS*LQPNE*WLVHEG 3726 Query: 1420 TNTPCLQQRRYQVL*VSNTEEH 1485 T+ PC +++ V +T EH Sbjct: 3725 TDKPC*LEKQCLV*SRLDTGEH 3660 Score = 29.9 bits (59), Expect(2) = 1e-06 Identities = 25/75 (33%), Positives = 35/75 (46%) Frame = +1 / -3 Query: 844 TTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HE 1023 TT *D *+ K *+HQQLDLL + ++ L L QN++ A F +E Sbjct: 4301 TTFLG*DCA*NFLTV*QAKP**SHQQLDLL*VQNQSLTIFEILFLEQNDSQLLYA*FWYE 4122 Query: 1024 RLDWQTSMWLQHCHT 1068 + D + L HT Sbjct: 4121 KQD*KKDT*LLDYHT 4077
>LOC_Os01g67690:12001.t06126:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4347 Score = 420 bits (911), Expect = e-116 Identities = 173/271 (63%), Positives = 216/271 (79%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA D++K+ + CKP TPLS +EKL+L EG+P+ D T+YR +VGALQ Sbjct: 3535 NGVILTQEKYANDMLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQ 3714 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+++VNKVC FLHAPTT H+ A KRI+RY+ ++GL+ KS STLV +S Sbjct: 3715 YLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHGYS 3894 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++D AG +DDR+STGGFA+F G NL+SWSARKQ TVSRSS EA YKA+AN TAE+IWVQ+ Sbjct: 3895 DADGAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQT 4074 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +LKELGI+S K WCDN+GA YLSAN VFHA+TKHI +D+HFV ERV+ KLL+I F+ Sbjct: 4075 VLKELGIESPKAAKIWCDNLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDFVP 4254 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 S DQVADGFTKAL + E+FKHNLNL +L* Sbjct: 4255 SGDQVADGFTKALSARLLENFKHNLNLTRL* 4347 Score = 239 bits (516), Expect = 5e-62 Identities = 132/246 (53%), Positives = 154/246 (62%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFVNPSAT S + +S S T S TK* S +CFV A* T LADKY+AP LSHQ Sbjct: 4289 AFVNPSATWSPDGTKSISNSFCDTRSLTK**STCICFVFA*NTGLADKYLAPKLSHQILA 4110 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 L IPNSF+ CTH++SAV FA+ALY AS+LDL+TV CFLA + RL PKN ANPPV+ Sbjct: 4109 ALGDSIPNSFNTVCTHISSAVVFATALYSASVLDLDTVGCFLALQDTRLEPKNTANPPVD 3930 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS PA S E T VE L P F YL I A++* VVGA +N* TLFT Sbjct: 3929 FLSSILPAPSASEYP*TRVEALLCT*SPRLVHWFKYLRILFTAIQ*LVVGA*RN*QTLFT 3750 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 +SGLV VKY +APT LY V S G PS R +FS+ ++GV GLQ F+ S Sbjct: 3749 E*AMSGLVKVKYCKAPTILLYCVASLGPKGDPSYRVNFSLTERGVLTGLQFDILTLFSIS 3570 Query: 1620 VAYFS* 1637 AYFS* Sbjct: 3569 FAYFS* 3552 Score = 146 bits (313), Expect(2) = 1e-37 Identities = 71/157 (45%), Positives = 98/157 (62%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+F++FK CKP+SNL+ * NK N+ + + +S S+KM I + +LC MK I Sbjct: 4332 VKIVFKIFKKSS*QCLCKPVSNLVS*WNKINL*QLL*HSFSYKMIINMYMLCLCMKHRIS 4153 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP* 1216 + GS ++TP GS R +Q *HGL+PY F C IC L+ CL A +S LF S P Sbjct: 4152 **IFGS*VITPNLGSFRRLNSQFF*HGLYPYQFGCSICHSLIFCLCA*P*HSRLFPSTPG 3973 Query: 1217 NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGL 1327 ++IR++KYCK +C* SVI +CPV IR +K R L Sbjct: 3972 HKIRTQKYCKSSC*FSVIYTTCPVCIRIPMNKSRSTL 3862 Score = 31.8 bits (63), Expect(2) = 1e-37 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 / -1 Query: 1412 M*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 M KLT+ VY +RSC+ Q+L ST TS+ + Sbjct: 3777 MKKLTNFVY*ISYVRSCQGQVL*STNYTSILCCI 3676 Score = 122 bits (260), Expect = 1e-26 Identities = 74/194 (38%), Positives = 103/194 (53%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C ++ D KT*+ L KQ + V +C+ + SL S + KI E + + Q FY+C Sbjct: 3705 CFTILDLDKT*HSLFSKQSLSVSSCSYYQSLDSSKKNPKILEPVHKSRTSCTQECFYSCS 3884 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 F* R GR R*Q NR +C+IF *S + C*+T++C ++ HRGR+ G K +S + M Sbjct: 3885 WVF*CRRGR*YR*QKINRRICSIFGF*SCVLEC*ETAYCVKVKHRGRI*GCGKYYSRTDM 4064 Query: 1124 GAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHS 945 G K +G * LV* S I + S +SC +KA+ SFC R S + Sbjct: 4065 GTNRVKRIGN*VS*SCQDLV**LRSQIFIS*SCVSCKDKAYTC*LSFCKRTSVTEAVRD* 4244 Query: 944 VYSFKRSSC*WVYK 903 S +R SC* VYK Sbjct: 4245 FCSIRRPSC*RVYK 4286 Score = 95.5 bits (202), Expect(2) = 1e-25 Identities = 67/156 (42%), Positives = 79/156 (50%) Frame = -1 / +2 Query: 1320 LLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMP 1141 LL L + L+QTGQ *MT+ QQ LQYF LI G+L N L A RQ R Q+ Sbjct: 3869 LLLLFMGILMQTGQVV*MTENQQEDLQYFWVLILCPGVLGNSLLCQGQAQRQNIRLWQIL 4048 Query: 1140 QLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQI 961 Q YG PC*++W L+LP GV EP+ I FM QS I IL E E Sbjct: 4049 QPN*YGYKPC*KNWELSLLKLPRFGVIT*EPNIYQLILCFMQRQSIYMLIIIL*ENECHR 4228 Query: 960 NSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST* 853 + LF Q+ KLL GLQ+ LK N I T* Sbjct: 4229 SC*RLILFHQETKLLTGLQRHCQLDFLKILNTILT* 4336 Score = 42.8 bits (87), Expect(2) = 1e-25 Identities = 27/76 (35%), Positives = 44/76 (57%) Frame = -1 / +2 Query: 1638 LKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQ 1459 LK++MQ *+ L ++ + LL+L+ KN L ++H + N +V VL++ * Q Sbjct: 3551 LKRSMQMIC*RELICQIASQLVLLFLLVKN*LYMRDHPWVLMMQHNIEV*LVLYNT*P*Q 3730 Query: 1458 DLISPLL*TRCVSFYM 1411 DL + *T+ VSF+M Sbjct: 3731 DLT*LIQ*TKFVSFFM 3778 Score = 87.2 bits (184), Expect = 3e-16 Identities = 61/157 (38%), Positives = 77/157 (49%) Frame = +1 / -3 Query: 859 *DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQ 1038 *D V*+ Q L*T QQL LL E + + L L QN+N AL HE D Sbjct: 4330 *DCV*NFQEVELTVPL*TRQQLGLLMEQNQSLTASVTLVLLQNDNQHVYALSLHETQD*L 4151 Query: 1039 TSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK 1218 ++WL HT++ + * +P L PI ++L +L P LP C Q V * + Sbjct: 4150 INIWLLSYHTKSWQL*ETQFPILLTRFVPISVRL*YLPQPYILPLCLTLTQ*AVS*HSRT 3971 Query: 1219 *D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC 1329 D* KILQ LL CHL LP L+ H Q *K +C Sbjct: 3970 QD*NPKILQILLLIFCHLYYLPRLHQNTHEQE*KHSC 3860
>LOC_Os07g29520:12007.t02642:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4370 Score = 419 bits (910), Expect = e-116 Identities = 175/271 (64%), Positives = 214/271 (78%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+Q+KYATDL+KK + CKP TP+S +EKLS+ EG+ + D T++R +VGALQ Sbjct: 3558 NGIVLTQDKYATDLLKKVEMMNCKPITTPMSVSEKLSVHEGSLLGPNDATQFRSIVGALQ 3737 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F+VNKVC FLH PTT+H+ A KRI+RY+K +GLN KS STLVS FS Sbjct: 3738 YLTLTRPDIAFSVNKVCQFLHTPTTIHWAAVKRILRYLKSCTKMGLNIHKSGSTLVSGFS 3917 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG +DDRRST GFAIF G NL+SW+ARKQATVSRS E+ YKA+ANATAE++WVQ+ Sbjct: 3918 DADWAGSIDDRRSTSGFAIFIGSNLVSWNARKQATVSRSITESEYKAIANATAEIMWVQT 4097 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L ELG KS + WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ Sbjct: 4098 LLLELGTKSPQAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLNIDFVS 4277 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 S DQVADGFTK L T E FK NLNL +L* Sbjct: 4278 SGDQVADGFTKPLSTNLLEKFKANLNLSRL* 4370 Score = 250 bits (540), Expect = 2e-65 Identities = 137/248 (55%), Positives = 152/248 (61%) Frame = +3 / -2 Query: 891 VRKAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQ 1070 V VNPSAT*S E M + TLS TK* S SMCFVLA*KT ADKY AP LSHQ Sbjct: 4321 VDSGLVNPSAT*SPEETKSMFSNF*LTLSLTK**STSMCFVLA*KTGFADKYFAPRLSHQ 4142 Query: 1071 KQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANP 1250 L +PNS S CTH+ SAVA A ALY S++DL+TVACFLA H+ RL P IANP Sbjct: 4141 IFAA*GLLVPNSKSRVCTHIISAVALAIALYSDSVIDLDTVACFLAFHDTRLEPIKIANP 3962 Query: 1251 PVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HT 1430 V+ LSS PAQS E LT V+ DL F PI F YL+I A + VVG +N* T Sbjct: 3961 LVDLLSSMLPAQSASENPLTRVDPDLCIFSPILVHDFKYLSILFTAAQCIVVGV*RN*QT 3782 Query: 1431 LFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFF 1610 L T ISGLVSVKY +APT L V S PS DSFS+ D GV +GLQ FF Sbjct: 3781 LLTENAISGLVSVKYCKAPTMLLN*VASLGPKRDPSCTDSFSLTDIGVVIGLQFIISTFF 3602 Query: 1611 TKSVAYFS 1634 KSVAY S Sbjct: 3601 NKSVAYLS 3578 Score = 143 bits (306), Expect = 4e-33 Identities = 93/210 (44%), Positives = 116/210 (55%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I E + +C F K ISNLI NK NVQ+F+ S KM I L VLCS MK+ I Sbjct: 4355 VKIGLEFLQEIC*QWFSKSISNLITRRNKINVQQFLTYPFSDKMIINLYVLCSGMKNRIC 4176 Query: 1037 RQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP* 1216 + IVTP LR +QL L+P++FSC I C V L RS GLFSS P* Sbjct: 4175 **ILCPKIVTPNFCCLRTLSSQL*KQSLYPHNFSCCIGYCFVF*LCNRS*YCGLFSSIP* 3996 Query: 1217 NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEV 1396 + IR+ K K T * SVI A+ PV IR+ST+ I*+++ IS Y SC V Sbjct: 3995 H*IRTNKDSKSTS*PSVIYATSPVCIRESTN*SGP*FVYI*SHLST*LQISKYPFYSCPV 3816 Query: 1397 NCGWCM*KLTHLVYSKGDIRSCKCQILKST 1486 CG M +LT + K IRS KCQ+L S+ Sbjct: 3815 YCGRGMKELTDFIDRKCYIRSSKCQVL*SS 3726 Score = 132 bits (283), Expect = 7e-30 Identities = 72/191 (37%), Positives = 104/191 (54%) Frame = -2 / +2 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++ DTY T*Y + C+ + V + H++L SC+ + I E +K+ Q+ ++ Sbjct: 3734 TILDTY*T*YSIFCQ*SLSVPSYPYHNTLGSCKKDT*IFEVMY*DGTKYTQIRVHSS*WI 3913 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 * RLG R*Q N W+C ++W *S M C*KT H +I +R R+Q S+C+S*+++G Sbjct: 3914 L*CRLGW*HR*QKVN*WICYLYWF*SSVMEC*KTGHSIKIYYRVRIQSNSQCNS*NYVGT 4093 Query: 1118 IHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVY 939 A VG + S LV*Q W + + +S SC NKAH SFC R+ H Sbjct: 4094 DSAFRVGN*ESSSSKNLV*QSWGKVFISKSCFSCQNKAHRG*LSFCQRKGKSEIAEH*FC 4273 Query: 938 SFKRSSC*WVY 906 F SSC*W+Y Sbjct: 4274 FFG*SSC*WIY 4306 Score = 95.5 bits (202), Expect(2) = 6e-24 Identities = 60/130 (46%), Positives = 72/130 (55%) Frame = -1 / +1 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+QTG A*MT+ Q V L L LI HG+LEN+P + DL Q T+ * M QLK G Sbjct: 3916 LMQTGLVA*MTEGQLVDLLSLLVLI*CHGMLENRPQYQDLLQSQNTKQ*PMQQLKLCGYR 4095 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLF 937 C SW + L+ GVT+L I FM EQST R I IL E+ N T LF Sbjct: 4096 LCF*SWELRVLKQQKFGVTILGQSIYQQILFFMPEQST*RLIIILSEKG*VRNC*TLILF 4275 Query: 936 IQKIKLLMGL 907 ++ IKLLM L Sbjct: 4276 LRVIKLLMDL 4305 Score = 36.8 bits (74), Expect(2) = 6e-24 Identities = 29/84 (34%), Positives = 39/84 (46%) Frame = -1 / +1 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 K NM +*+ L VN LL KN L + + LN L++ *HL D Sbjct: 3577 KINMPPIY*RKLK**TVNQSQLLCQ*VKNCLYMRGLFWVLMMQLNLGA*LELYNT*HLLD 3756 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQL 1384 LI L + VS ++ PQ+T QL Sbjct: 3757 LI*HFLSIKSVSSFIPLPQYTGQL 3828 Score = 47.3 bits (97), Expect(2) = 6e-12 Identities = 31/70 (44%), Positives = 36/70 (51%) Frame = +1 / -3 Query: 1096 YPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLG 1275 +PT A P * QL H L+ C L *I W VF* +M D* Q Q H L CHL Sbjct: 4116 FPTLKAESVPT*FQLLHWLLLCILTL**ILILWPVF*HSMTLD*NQ*R*QIH*LTFCHLC 3937 Query: 1276 ILPSLN*KKH 1305 PSL+ + H Sbjct: 3936 YQPSLHQRIH 3907 Score = 44.1 bits (90), Expect(2) = 6e-12 Identities = 27/75 (36%), Positives = 37/75 (49%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 TL *D+ * + + * HQQLD + +C + L QN+N CALF HE+ Sbjct: 4365 TLIG*DWP*ISPRDLLTVV**IHQQLDHPKKQNQCSAISDLPFL*QNDNQPLCALFWHEK 4186 Query: 1027 LDWQTSMWLQHCHTR 1071 D + Q CHT+ Sbjct: 4185 QDLLINTLPQDCHTK 4141
>LOC_Os11g46010:12011.t04126:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2973 Score = 419 bits (909), Expect = e-116 Identities = 169/267 (63%), Positives = 215/267 (80%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + + L+QEKYA+D++++ G+Q CKP TPL ++EKL + EGT + DTT+YR +VGAL Sbjct: 2158 DGIMLTQEKYASDILRRVGMQDCKPVSTPLLASEKLLVHEGTLLGQKDTTQYRSIVGALP 2337 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC FLH+PTTVH+T KRI+RY+K+T+N GL SKS S LVS F Sbjct: 2338 YLTLTRPDISFSVNKVCQFLHSPTTVHWTVVKRILRYLKYTVNCGLRISKSSSLLVSGFC 2517 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGCLDDRRSTGGFA+F G NL+SWSARKQ TVSRSS EA YKALA+ AE++W+Q+ Sbjct: 2518 DADWAGCLDDRRSTGGFAVFLGSNLVSWSARKQTTVSRSSTEAEYKALADTKAEIMWLQT 2697 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L E+GI++ K WCDNVGA YLS N +FHARTKHIE+D++ V ERV+ KLL+I +I Sbjct: 2698 LLYEIGIETPKAAKVWCDNVGAKYLSVNPMFHARTKHIEVDYYIVRERVSRKLLEIEYIS 2877 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNL 854 SKDQ+A GFTK+L + FE FK NLN+ Sbjct: 2878 SKDQIAYGFTKSLTVRPFEVFKSNLNI 2958 Score = 256 bits (554), Expect = 3e-67 Identities = 131/244 (53%), Positives = 155/244 (63%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV P A *S + I +S S TLS T * S S+C V A* ++Y+APTLSHQ Sbjct: 2909 FVKPYAI*SLDEIYSISSSFLETLSRTM**STSICLVRA*NIGFTERYLAPTLSHQTFAA 2730 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 + +P S+S +HM SA A+ALY AS+LDL+TV CFLA H+ RL P+ ANPPV+R Sbjct: 2729 FGVSMPISYSKVWSHMISAFVSANALYSASVLDLDTVVCFLALHDTRLEPRKTANPPVDR 2550 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS+HPAQS +K LTS E DLL P F+V YL I L V+*TVVG CKN HTLFT Sbjct: 2549 LSSKHPAQSASQKPLTSKEEDLLILSPQFTVYLRYLKILLTTVQ*TVVGECKNWHTLFTE 2370 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSV 1622 EISGLV V+Y +APT LY VVS VPS ++FS KGV GLQ C P S Sbjct: 2369 NEISGLVRVRYGKAPTILLYCVVSFCPSKVPS*TNNFSDASKGVLTGLQSCIPTRRRISD 2190 Query: 1623 AYFS 1634 AYFS Sbjct: 2189 AYFS 2178 Score = 141 bits (302), Expect = 2e-32 Identities = 87/223 (39%), Positives = 118/223 (52%) Frame = +2 / -1 Query: 968 NSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGI 1147 NS S+ + + + +SMK I R++ SNIVTP+ SL FY L+ L P+DFS I Sbjct: 2844 NSFSNNVIVNFYMFSTSMKHRIYRKILSSNIVTPDLCSLWRFYANLIQQSLEPHDFSFCI 2665 Query: 1148 C*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGL 1327 CLV C S + L S P*+ +R+KK CK + + VI SCPV I K+T+K R G Sbjct: 2664 SQCLVLCFCT*S*HCCLLSCTP*H*VRAKKDCKSSSRSPVIQTSCPVCITKTTNKQRGGF 2485 Query: 1328 AEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFS 1507 + *+ I + IS L C VNC W M*KL +L+Y + +I S K QI + T V Sbjct: 2484 TDS*STIHCILKIS*DPLDYCPVNCSWRM*KLAYLIY*E*NIWSSKSQIW*GSNYTPVLC 2305 Query: 1508 SVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 + + +F FF RS FT L + + CIFFL Sbjct: 2304 CIFLS*QSAFMN*QFF*C*QRSTYWFTVLHSYTPKNIRCIFFL 2176 Score = 99.1 bits (210), Expect(2) = 4e-23 Identities = 58/155 (37%), Positives = 83/155 (53%) Frame = -2 / +3 Query: 1589 L*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTC 1410 L*T +SF RK +S R+ R + +Q ++ D+Y T Y + K G+ VFT Sbjct: 2223 L*TSKYSFASIRKIVSS*RHFARTKRYNTVQEYSWSLTISDSY*TRYFILSK*GMPVFTF 2402 Query: 1409 TNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFW 1230 +N+SSL S Q KI Y+E W+K Q + + C F * RLGRM *Q +C++ W Sbjct: 2403 SNYSSLDSSQEDLKIS*VYSELWTKNQ*ILLFAC*WFL*CRLGRMFG*QAIYWRICSLSW 2582 Query: 1229 T*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 * M C K ++ +I +R RVQG S*+H+ Sbjct: 2583 L*PSVMECKKANNSVKIKYRSRVQGIG*YKS*NHV 2687 Score = 30.4 bits (60), Expect(2) = 4e-23 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC 1017 LV*QCWS + C+S +SC Sbjct: 2742 LV*QCWS*VSFCKSYVSC 2795 Score = 99.1 bits (210), Expect = 8e-20 Identities = 75/186 (40%), Positives = 96/186 (51%) Frame = -1 / +2 Query: 1479 FSI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VL 1300 + I* L D I * R SFY+ Q QFT Q *D+ +I+*I+ * S +P L L V+ Sbjct: 2333 YHI*LLLDQIFHSQ*IRYASFYILQLQFTGQ*SRGS*DILSIQ*IVD*ESVNPPLCLLVV 2512 Query: 1299 FLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGC 1120 F++QTGQD MT LQ FL L HG+ E+K D +Q TRH + +LKS G Sbjct: 2513 FVMQTGQDVWMTGDLLEDLQSFLALT*CHGVQESKQQCQDQVQKQSTRHWLIQKLKSCGS 2692 Query: 1119 NPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGL 940 C *K RL SGVTMLE L I FML + + L E+E + + Sbjct: 2693 KLCCMRLA*KRQRLQRSGVTMLELSIFL*ILCFMLVLNI*KLTITLFEKEFLESYLR*NI 2872 Query: 939 FIQKIK 922 F +IK Sbjct: 2873 FHPRIK 2890 Score = 73.9 bits (155), Expect = 3e-12 Identities = 56/147 (38%), Positives = 69/147 (46%) Frame = +1 / -3 Query: 1018 HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWL 1197 HE D Q LQHCHTR + +FL + A * QL + +PCTL I Sbjct: 2794 HET*DLQKDT*LQHCHTRPLQPLAFLCQSHTAKFGAT*FQLLYQPMPCTLLLYLILTLLF 2615 Query: 1198 VF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLY 1377 F +M * Q+ LQ CH ILPSL+ K H Q + * L S Y IL Sbjct: 2614 AFLHSMTLG*SQERLQILQ*IACHPNILPSLHHKNH*QAKRRIY*FLVHNSLYT*DILRS 2435 Query: 1378 AWQL*SELWLVHVKTNTPCLQQRRYQV 1458 + L SEL L +VKT P L + +Y V Sbjct: 2434 S*LLSSEL*LENVKTGIPYLLRMKYLV 2354
>LOC_Os06g17100:12006.t01582:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4301 Score = 418 bits (908), Expect = e-116 Identities = 171/263 (65%), Positives = 212/263 (80%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++++ + CK TPLS +E LS GTP+ D+TKYR LVGALQYLTL Sbjct: 3498 LTQEKYAKDVLRRVNMSECKAVNTPLSISEILSAQGGTPLGPEDSTKYRSLVGALQYLTL 3677 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+SF+VNKVC +LHAPTT ++ AAKRI+RY+KHT+ +GL SKS S LVSAFS++DW Sbjct: 3678 TRPDLSFSVNKVCQYLHAPTTEYWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADW 3857 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANATA+++W+Q++L E Sbjct: 3858 AGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAKIMWIQTLLLE 4037 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LG++ + CDN+GA YLS+N VFH RTKHIE+D+HFV ERVA KLL + +I + DQ Sbjct: 4038 LGVQVPRAAKVRCDNIGAKYLSSNPVFHTRTKHIEVDYHFVRERVARKLLQVEYISTTDQ 4217 Query: 922 VADGFTKALRTQSFEDFKHNLNL 854 VADGFTK L + E F++NLNL Sbjct: 4218 VADGFTKTLAVRQLEMFRNNLNL 4286 Score = 249 bits (539), Expect = 3e-65 Identities = 131/243 (53%), Positives = 151/243 (62%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S + +L AT S TK* S S+CFV * T L DKY AP LSH L Sbjct: 4234 VKPSAT*SVVDMYSTCNNLRATRSRTK**STSICFVRV*NTGLDDKYFAPILSHLTLAAL 4055 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 P+S S C H+ AVA A ALY AS+LD +TVAC A H+ RLGP A PPV+R Sbjct: 4054 GT*TPSSRSNVCIHIILAVALAKALYSASVLDRDTVACLRALHDTRLGPIKTAKPPVDRR 3875 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS+HPAQS EKALT E DLL F P +VCF YL I LAA + +VVGACK *HTLFT K Sbjct: 3874 SSKHPAQSASEKALTRRELDLLIFNPSLTVCFKYLRILLAATQYSVVGACKY*HTLFTEK 3695 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 + SGLV VKY RAPT+ LYLV+S+ GVP + S +D GV L S+A Sbjct: 3694 DKSGLVKVKYCRAPTKLLYLVLSSGPRGVPP*ALNISEIDNGVLTALHSLIFTLLNTSLA 3515 Query: 1626 YFS 1634 YFS Sbjct: 3514 YFS 3506 Score = 134 bits (288), Expect = 1e-30 Identities = 79/202 (39%), Positives = 114/202 (56%) Frame = +2 / -1 Query: 908 KPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLR 1087 K ISNLI ++Q+ CNS S+KM I+ N+ C+SMK I + +NI+TP G R Sbjct: 4232 KTISNLICSRYVLHLQQLTCNSFSNKMIIHFNMFCTSMKHRIR**IFCTNIITPYLGCSR 4053 Query: 1088 AFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSV 1267 ++ L+P++FS I + C S +S LF+ P*++IR K K + + + Sbjct: 4052 HLNSKFKK*CLYPHNFSSSISQGFIFCFCT*S*HSCLFTCTP*HKIRPYKNSKTSGGSPI 3873 Query: 1268 I*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKG 1447 I SCP+ IR+ST+K R L ++* + IS LG V C W M LTH V+ +G Sbjct: 3872 IQTSCPICIRESTNKKRIRLTDL*PKFNCVL*ISQNPLGCYPVFCSWSMQILTHFVH*EG 3693 Query: 1448 DIRSCKCQILKSTYQTSVFSSV 1513 I S QIL+S+ QTSVFS++ Sbjct: 3692 QIWSS*SQILQSSNQTSVFSTI 3627 Score = 86.8 bits (183), Expect(2) = 2e-24 Identities = 50/128 (39%), Positives = 70/128 (54%) Frame = -2 / +2 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y*IQ G S+VFD T ++L +Q V VF C+N+ L S Q S+I + ++ W K Q Sbjct: 3632 Y*IQKFGWSSAVFDFN*TRFVLLSEQSVSVFACSNYRILGSSQEDSEIFKAHS*TWVKDQ 3811 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 V F +C CF * RLGRM * +R C + *S M C T +C I +R R+ Sbjct: 3812 *V*FSSC*CFL*CRLGRMFG*SAIHRRFCCFYRA*SCVMECT*TGNCVTIKYRSRI*SLG 3991 Query: 1148 KCHS*SHM 1125 C+ *+++ Sbjct: 3992 *CYC*NYV 4015 Score = 47.3 bits (97), Expect(2) = 2e-24 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = -2 / +2 Query: 1055 WSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 W I + S +S K +* SFC R SC * + V+ + RSSC*W Y+ Sbjct: 4085 WCKIFII*SCVSYSYKTY*SGLSFCSRTSCT*VVASGVHIYYRSSC*WFYQ 4237 Score = 65.2 bits (136), Expect = 1e-09 Identities = 53/132 (40%), Positives = 66/132 (50%) Frame = -1 / +1 Query: 1518 QWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV 1339 Q +LNT+VW L SI* D I P *T+CVS M Q Q T P *D+*+ + L Sbjct: 3622 QKIVLNTEVWLELCSI*L*LDQICPSQ*TKCVSICMLQLQNTG*QPRGF*DI*STQLNLG 3801 Query: 1338 *ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGT 1159 * S S +L L VL L+Q GQD M L + LI HG+ N+ L D +Q Sbjct: 3802 *RSVSLILFLLVLSLMQIGQDVWMIGDPPEVLLFL*GLILCHGVHVNRQLCHDQVQKQNI 3981 Query: 1158 RH*QMPQLKSYG 1123 + M LK G Sbjct: 3982 KPWLMLLLKLCG 4017 Score = 46.0 bits (94), Expect(2) = 6e-08 Identities = 32/80 (40%), Positives = 41/80 (51%) Frame = +1 / -3 Query: 1267 HLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQR 1446 H ILP+L+ +KH Q T *+L Q +I +W L S L L H T+T C +R Sbjct: 3873 HPNILPNLHQRKH*QEEN*TY*SLTQV*LCALNISESSWLLPSIL*LEHANTDTLCSLRR 3694 Query: 1447 RYQVL*VSNTEEHLPDICI* 1506 V SNT E P+ CI* Sbjct: 3693 TNLV*LKSNTAELQPNFCI* 3634 Score = 38.2 bits (77), Expect(2) = 6e-08 Identities = 22/54 (40%), Positives = 29/54 (53%) Frame = +1 / -3 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 * HQQLDL T Y+QL L QN+N Q L+ +E D ++ Q+ HT Sbjct: 4233 *NHQQLDL**ICTPLATTYVQLVLEQNDNPLQYVLYEYETQD*MINILHQYYHT 4072
>LOC_Os05g39920:12005.t03532:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4350 Score = 418 bits (908), Expect = e-116 Identities = 174/267 (65%), Positives = 210/267 (78%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L QEKYATDL+KK G+ CKP TP+S++EKLS GT + D TKYR +VGALQYLTL Sbjct: 3550 LKQEKYATDLLKKAGMMDCKPVSTPISTSEKLSAYSGTVLGENDATKYRSIVGALQYLTL 3729 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISF+VNKVC FLH+PT H+T+ K I+RY+K +++GL S S LVSAF ++DW Sbjct: 3730 TRPDISFSVNKVCQFLHSPTVEHWTSVKMILRYIKS*VDLGLKICHSSSMLVSAFLDADW 3909 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGF +F G NL+S SARKQATVSRSS EA YKA+ANATAEV+W+Q+ LKE Sbjct: 3910 AGSVDDRRSTGGFVVFLGSNLVS*SARKQATVSRSSTEAEYKAVANATAEVMWIQTFLKE 4089 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 +G+ +S+ C WCDN+GATYLS N VF+ARTKHIE+D+HF ERVA K L I+FI S DQ Sbjct: 4090 IGVNTSQAACLWCDNLGATYLSVNPVFYARTKHIEVDYHFFRERVARKQLVIKFISSGDQ 4269 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTK L Q +F+HNLNL KL* Sbjct: 4270 VADGFTKPLSVQLLRNFRHNLNLDKL* 4350 Score = 260 bits (563), Expect = 2e-68 Identities = 133/243 (54%), Positives = 159/243 (65%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT S E IN ++ ATLS K* S S+C VLA* T L ++YVAP LSH KQ Sbjct: 4286 VKPSATWSPEDINFITNCFLATLSLKK**STSICLVLA*NTGLTERYVAPRLSHHKQAA* 4107 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 ++ P S C H+TSAVA A+ALY AS+LDL+TVACFLA + +L PKN PPV+ L Sbjct: 4106 DVLTPISLRKVCIHITSAVALATALYSASVLDLDTVACFLAL*DTKLDPKNTTKPPVDLL 3927 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS PAQS +KALTS+E + F+P + F YL I V+ + VG CKN* TLFT K Sbjct: 3926 SSTDPAQSASKKALTSIEDE*HIFKPKST*DFIYLNIIFTDVQCSTVGLCKN*QTLFTEK 3747 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 EISGLV VKY +APT LYLV S VP D+FS ++ GV GLQ P FF+KSVA Sbjct: 3746 EISGLVKVKYCKAPTILLYLVASFSPRTVPL*ADNFSEVEIGVLTGLQSIIPAFFSKSVA 3567 Query: 1626 YFS 1634 YFS Sbjct: 3566 YFS 3558 Score = 141 bits (303), Expect = 1e-32 Identities = 85/204 (41%), Positives = 113/204 (55%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F K ISNL+ * K Q F NS S KM I+ +L S +K I ++C + I+TP T S Sbjct: 4290 FSKTISNLVS*RYKFYHQLFPGNSFSEKMIIHFYMLSSGIKHRIN*KICSTKIITP*TSS 4111 Query: 1082 LRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*T 1261 LR + L L+P+ F I CLV CL G S L SS + S+K+ K + * Sbjct: 4110 LRCINSNFLKKSLYPHYFCSCISYCLVFCLCT*PGYSSLLSSTLGY*VGSQKHNKASS*P 3931 Query: 1262 SVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYS 1441 S+I SCP+ I KSTHK RR + T I +IS Y C + W M KLT+LV+ Sbjct: 3930 SIIHRSCPISI*KSTHKHRR*MTYFQTQINLRLYISQYHFH*CPMFNCWTMQKLTNLVH* 3751 Query: 1442 KGDIRSCKCQILKSTYQTSVFSSV 1513 +G+IRS QIL+S+ TS+FS + Sbjct: 3750 EGNIRSG*SQILQSSNYTSIFSCI 3679 Score = 61.6 bits (128), Expect(4) = 3e-25 Identities = 28/65 (43%), Positives = 40/65 (61%) Frame = -2 / +3 Query: 1319 FYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCH 1140 FY CECFF LGR+ * N +C +F + C*K S+C Q+ +RGR+QG+S C+ Sbjct: 3873 FYACECFFRC*LGRICG**KVNWRLCCVFGIQLSILEC*KASYCIQVKYRGRIQGSS*CN 4052 Query: 1139 S*SHM 1125 S++ Sbjct: 4053 CRSNV 4067 Score = 55.1 bits (114), Expect(4) = 3e-25 Identities = 25/57 (43%), Positives = 34/57 (59%) Frame = -2 / +3 Query: 1076 LFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 LF+V* W +I S + C N A+ SF R+SC+ T+G +Y F+R SC*W Y Sbjct: 4116 LFMV**SWCYISFS*SCVLCQN*AYRSGLSFFQRKSCQETIGDKIYIFRRPSC*WFY 4286 Score = 28.6 bits (56), Expect(4) = 3e-25 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNY 1546 +KNM + *+ L +VN LL+L+Q+NY Sbjct: 3557 RKNMLRIC*RKLE*WIVNQLVLLFLLQRNY 3646 Score = 26.3 bits (51), Expect(4) = 3e-25 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTN 1404 ++FD +T*Y L +QG+ +F +N Sbjct: 3714 AIFDFNQT*YFLLSEQGLSIFA*SN 3788 Score = 44.6 bits (91), Expect(2) = 1e-10 Identities = 32/76 (42%), Positives = 42/76 (55%) Frame = -1 / +2 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+*+++ I V* LL L*VLF + GQD M + Q L F D + +LE+K Sbjct: 3821 *DI*SLKLIWV*KYVIHLLCL*VLF*MLIGQDLWMIEGQLEALLCFWDPT*YPRVLESKL 4000 Query: 1191 LFPDLASRQGTRH*QM 1144 L+P RQ TR * M Sbjct: 4001 LYPGQVQRQNTRQ*LM 4048 Score = 42.3 bits (86), Expect(2) = 1e-10 Identities = 26/60 (43%), Positives = 34/60 (56%) Frame = -1 / +2 Query: 1086 LRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGL 907 L+L V GV +L H I FM E S + I I E+EL N+W L++Q+ KLLM L Sbjct: 4106 LKLLVYGVIILVLHIFQLILCFMPELSI*KWIIIFSEKELPGNNW**NLYLQETKLLMVL 4285 Score = 43.2 bits (88), Expect(3) = 7e-10 Identities = 25/59 (42%), Positives = 31/59 (52%) Frame = +1 / -3 Query: 1144 HLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*K 1320 H L+PC LP W Q L F* + + K Q+ L H ILP+ + KKHSQ *K Sbjct: 4048 H*LLPCILPLYLTWIQ*LAF*HSRILSWIPKTQQSLQLTFYHPQILPNQHLKKHSQA*K 3872 Score = 34.5 bits (69), Expect(3) = 7e-10 Identities = 30/78 (38%), Positives = 37/78 (47%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D V*+ + * HQQL LL * P V QL L +N+N A F H+ Sbjct: 4345 TYLS*DCV*NFLAAEPTMV**NHQQLGLLKI*ILSPIVSWQLFL*KNDNPLLYA*FWHKT 4166 Query: 1027 LDWQTSMWLQHCHTRNRE 1080 D M Q HT N++ Sbjct: 4165 QD*LKDM*HQDYHTINKQ 4112 Score = 23.5 bits (45), Expect(3) = 7e-10 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +1 / -3 Query: 1405 LVHVKTNTPCLQQRRYQVL*VSN 1473 L + K + PC +R+YQV SN Sbjct: 3787 LDYAKIDKPCSLRRKYQVWLKSN 3719
>LOC_Os01g63960:12001.t05764:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4350 Score = 418 bits (907), Expect = e-116 Identities = 175/267 (65%), Positives = 212/267 (79%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q+KY DL+++ + CKP TPLS++EKLS+ EG P+ D T YR +VGALQYLTL Sbjct: 3550 LTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTL 3729 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F VNKVC FLHAPTT H+ A KRI+RY+K +GL SKS S LVSA S++DW Sbjct: 3730 TRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSACSDADW 3909 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGFA+F G NL+SWSARKQATVSRSS E+ YKALANATAE++WVQ++L E Sbjct: 3910 AGSLDDRRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAE 4089 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L ++S WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ KLL+I F+ + DQ Sbjct: 4090 LQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQ 4269 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTKAL + E+FK+NLNL KL* Sbjct: 4270 VADGFTKALSVRQLENFKYNLNLGKL* 4350 Score = 266 bits (576), Expect = 3e-70 Identities = 136/249 (54%), Positives = 160/249 (64%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KAFV PSAT*S +S + TLS TK* S SMC VLA* T LA++Y+AP LSH Sbjct: 4295 KAFVKPSAT*SPVGTKSISNNFLETLSRTK**STSMCLVLA*NTGLAERYLAPKLSHHNF 4116 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L NS + CTH+ SAVA A ALY S+LDLETVACF A H+ RL PKN A PPV Sbjct: 4115 AIDGLSTCNSANKVCTHIISAVALAKALYSDSVLDLETVACFRALHDTRLSPKNTAKPPV 3936 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSR PAQS E+ALT+++ DLL P CF YL I L A + VVGACKN* TLF Sbjct: 3935 DLLSSREPAQSASEQALTNIDLDLLNLSPSLVHCFKYLKILLTAAQWCVVGACKN*QTLF 3756 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K ISGLV+V+Y +APT L V S G PS D+FS++D+GV GLQ K Sbjct: 3755 TGKAISGLVNVRYCKAPTTLL*CVASFGPKGSPSFIDNFSLVDRGVLTGLQSNIFTLLNK 3576 Query: 1617 SVAYFS*ER 1643 S+ Y S* R Sbjct: 3575 SLTYLS*VR 3549 Score = 103 bits (220), Expect(2) = 2e-30 Identities = 59/149 (39%), Positives = 82/149 (55%) Frame = +2 / -1 Query: 1118 LHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IR 1297 L+P++ C I + L RS NS LF P*++I S +YCK +C + VI* + P+ I Sbjct: 4074 LYPHNLCCSISQSFIF*LCTRSRNSSLFPCTP*HKIIS*EYCKTSCRSPVI*GTSPICI* 3895 Query: 1298 KSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 ST+ R LA + + + IS +L SC + C W M*KLT+L+Y K +IR +C IL Sbjct: 3894 TSTY*HRSRLA*LKSKSSTLLQIS*NSLNSCPMVCSWSM*KLTNLIYRKSNIRPSQC*IL 3715 Query: 1478 KSTYQTSVFSSVH*IYRCSFHER*FFCTR 1564 ST TS+ + R SF R F R Sbjct: 3714 *STNYTSIMCCIIWS*RISFIYRQFLTCR 3628 Score = 50.6 bits (104), Expect(2) = 2e-30 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I+ ++ + S CK I NLI +K N +F NS S+KM I L V S MK I Sbjct: 4335 VKIVLKILQLSN*QSLCKTICNLISCRHKINF*QFP*NSFSNKMIINLYVFSSGMKHRIS 4156 Query: 1037 RQVCGSNIVTPE 1072 R++ S I+TP+ Sbjct: 4155 RKILSS*IITPQ 4120 Score = 90.4 bits (191), Expect(2) = 2e-24 Identities = 48/121 (39%), Positives = 66/121 (54%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C +V + *Y CK G+ +FTC+N++ L SC KI E W+ +QV Y + Sbjct: 3708 CFTVSNID*A*YCFSCK*GLSIFTCSNYTPLGSC*ENFKIFEAMY*TWT*VKQV*IYVSK 3887 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 C F RLG PR*Q R C+I *S M C +TS+CF I*+R R+ C+S ++ Sbjct: 3888 CLFRCRLGWFPR*QEIYRRFCSILRR*SCVMECTETSYCF*I*YRVRI*SFG*CYSRDYV 4067 Query: 1124 G 1122 G Sbjct: 4068 G 4070 Score = 43.7 bits (89), Expect(2) = 2e-24 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = -2 / +3 Query: 1037 CQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSF 897 C S +SC N H SFC R+S K + + +++RSSC W YK F Sbjct: 4155 C*SCVSCQN*THRG*LSFCSRKSFKEIVRN*FCAYRRSSCRWFYKGF 4295 Score = 56.5 bits (117), Expect(2) = 3e-14 Identities = 40/103 (38%), Positives = 57/103 (55%) Frame = +1 / -3 Query: 1177 *IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAY 1356 *I KQ LV +M D + +ILQ L CHLG P+L+ KH * TC Q Sbjct: 4015 *I*KQ*LVSVHSMTQDYLLRILQNLL*ISCHLGNQPNLHLNKHLLT*I*TCLT*VQV*YI 3836 Query: 1357 VSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 S+IL ++ QL + + L HVK + P LQ+++YQ + +T +H Sbjct: 3835 ASNILKFS*QLPNGV*LEHVKIDKPYLQEKQYQA*SMLDTVKH 3707 Score = 42.8 bits (87), Expect(2) = 3e-14 Identities = 29/74 (39%), Positives = 35/74 (47%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D *+ K L* H QLDLL + + L+L L QN+N C F HE Sbjct: 4345 TFLS*DCT*NSPTVELTKPL*NHLQLDLL*AQNQFLTISLKLFLEQNDNQPLCV*FWHET 4166 Query: 1027 LDWQTSMWLQHCHT 1068 D Q L + HT Sbjct: 4165 QD*QKDT*LLNYHT 4124 Score = 35.0 bits (70), Expect(2) = 6e-05 Identities = 22/51 (43%), Positives = 27/51 (52%) Frame = -1 / +2 Query: 1308 *VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTR 1156 *VL +Q G *MT Q LQY ++I HG+ NK LF DL Q + Sbjct: 3884 *VLVQMQIGLVP*MTGDLQEVLQYS*EIILCHGVHGNKLLFLDLVQSQNIK 4036 Score = 32.7 bits (65), Expect(2) = 6e-05 Identities = 26/57 (45%), Positives = 30/57 (52%) Frame = -1 / +2 Query: 1554 KNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQFTSQL 1384 +N L KE L* Q +V VL+SI*H LI L* R V+FYM Q QL Sbjct: 3638 RNCL*MKEIL*DQMMQHIIEV*LVLYSI*H*LGLILLFL*IRFVNFYMLQLHTIGQL 3808
>LOC_Os05g25330:12005.t02189:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4429 Score = 418 bits (907), Expect = e-116 Identities = 172/269 (63%), Positives = 216/269 (80%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K++L ++QE+YATDL+K+ ++ KP TPLSS+EK+S+ EG + D +Y +VGAL Sbjct: 3545 KDSLLINQERYATDLLKRVAMKNSKPVNTPLSSSEKISVYEGEKLGPEDAIRYISIVGAL 3724 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF+VNKVC FLH PTTVH+ A KRI+RYV+ T+N+GL F+++ S LVS F Sbjct: 3725 QYLTLTRPDISFSVNKVCQFLHTPTTVHWAAVKRILRYVQGTVNLGLKFNQASSMLVSGF 3904 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGC DDR+STGGFA+F G NLIS SARKQ TVSRSS EA YKALANATAE++WVQ Sbjct: 3905 SDADWAGCPDDRKSTGGFAVFLGSNLIS*SARKQPTVSRSSTEAEYKALANATAEIMWVQ 4084 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 +L ELG+K C WCDN+GA YLSAN VFHARTKHIEIDFHFV E+V+ KLLDI FI Sbjct: 4085 KLLDELGVKHPIAACLWCDNLGAKYLSANPVFHARTKHIEIDFHFVREQVSRKLLDIWFI 4264 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLI 851 ++ +Q+ADGFT+AL + +F+ NLNL+ Sbjct: 4265 NTNNQLADGFTEALPVRKLNEFRRNLNLV 4351 Score = 276 bits (597), Expect = 3e-73 Identities = 140/246 (56%), Positives = 163/246 (66%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KA VNPSA * F IN+MS + T S TK*KSIS+C VLA*KT LADKY+AP LSH K Sbjct: 4305 KASVNPSAN*LFVLINQMSSNFRDTCSRTK*KSISICLVLA*KTGLADKYLAPRLSHHKH 4126 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + PNS S CTH+ SAVAFA ALY AS+LDLETV CFLA +++L P+N A PPV Sbjct: 4125 AAIGCLTPNSSSNFCTHIISAVAFARALYSASVLDLETVGCFLAL*DIKLLPRNTAKPPV 3946 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS HPAQS E LTS++ L F P +V TY +I A +*TVVG CKN*HTL Sbjct: 3945 DFLSSGHPAQSASENPLTSIDDA*LNFNPRLTVP*TYRSILFTAAQ*TVVGVCKN*HTLL 3766 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T KEISG V V+Y*RAPT +YL+ S+ PS D FS D+GV GL +K Sbjct: 3765 TEKEISGRVKVRY*RAPTILMYLIASSGPNFSPS*TDIFSEDDRGVLTGLLFFIATLLSK 3586 Query: 1617 SVAYFS 1634 SVAY S Sbjct: 3585 SVAYLS 3568 Score = 155 bits (333), Expect = 8e-37 Identities = 88/216 (40%), Positives = 120/216 (55%) Frame = +2 / -1 Query: 854 QVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*I 1033 QVEI ++ + * F KPIS LI +NKPNVQ+F S+K+KI N+ S MK+ I Sbjct: 4348 QVEIAPKLIEFTHW*GFGKPISQLIVCINKPNVQQFSRYLFSNKVKINFNMFGSGMKNRI 4169 Query: 1034 GRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP 1213 RQ+ GS I+TP T Q + L+P+ F IC L+ CL N LF S Sbjct: 4168 SRQILGSKIITP*TCRNWMLDPQFIKQFLYPHYFCSSICKGLILCLCT*PRNCRLFPSTL 3989 Query: 1214 *NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCE 1393 +I KK+ K +C S+I AS P+ IRKSTHK R L + *+ I +I Y+ C Sbjct: 3988 RYQITPKKHSKTSCRFSIIWASSPICIRKSTHKHR*CLIKF*SKINCSLNIPKYSFHCCP 3809 Query: 1394 VNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSV 1501 +NC W M*+LT+ + + +I S +ILK T+ T V Sbjct: 3808 MNCSWSM*ELTYFINRERNIWSS*SKILKGTHNTYV 3701 Score = 137 bits (293), Expect = 3e-31 Identities = 73/197 (37%), Positives = 103/197 (52%) Frame = -2 / +1 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C SV T Y C + + T +N+SSL S + + +C + W K Y CE Sbjct: 3718 CPSVSYFNSTRYFFLC**SMSILTYSNYSSLGSSEKNTSVCSRNS*SWIKI*SSIIYACE 3897 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 F* RLG MPR* R C + W * + C*+T++ F + +RGRV G KC+ +++ Sbjct: 3898 WIF*CRLGWMPR**KIYRRFCCVSWE*FDILEC*ETTYSF*VKYRGRV*GPCKCYCRNNV 4077 Query: 1124 GAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHS 945 G A +G + +F+V* WS + VC S SC N+ +*+ FS C R GH Sbjct: 4078 GTEIA**IGGQASNCGMFMV**SWSQVFVC*SCFSCQNQTY*N*FSLCSRTGISKIAGHL 4257 Query: 944 VYSFKRSSC*WVYKSFT 894 VY +K+S *WVY+S T Sbjct: 4258 VY*YKQSVG*WVYRSLT 4308 Score = 59.7 bits (124), Expect(2) = 3e-12 Identities = 29/63 (46%), Positives = 37/63 (58%) Frame = +1 / -3 Query: 886 FVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCH 1065 + V+L *THQ D L *T+CP ++ L Q+EN Q F HE+ D QT+ WLQ H Sbjct: 4316 YALVRLR*THQPTDCLY**TKCPAIFEIPVLEQSENQFQYVWFWHEKQD*QTNTWLQDYH 4137 Query: 1066 TRN 1074 T N Sbjct: 4136 TIN 4128 Score = 39.1 bits (79), Expect(2) = 3e-12 Identities = 28/79 (35%), Positives = 43/79 (54%) Frame = +1 / -3 Query: 1267 HLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQR 1446 HLGI P+L+ K HSQ * * L Q ++ H ++ L +EL L +V+ + Q++ Sbjct: 3935 HLGIQPNLHQKIHSQA*MMLD*ILIQD*LFLEHTEVFFSLLPNEL*LEYVRIDILY*QRK 3756 Query: 1447 RYQVL*VSNTEEHLPDICI 1503 +Y V +TE H +CI Sbjct: 3755 KYLVELK*DTEGHPQYLCI 3699 Score = 63.4 bits (132), Expect = 4e-09 Identities = 32/60 (53%), Positives = 35/60 (58%) Frame = -1 / +3 Query: 1074 VSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 V GV +LEP CL I FM E + L+ IF L E N WTFGL IQ I LMGL K Y Sbjct: 4128 VYGVIILEPSICLLILFFMPEPNILKLIFTLFENRYLENCWTFGLLIQTISWLMGLPKPY 4307
>LOC_Os12g24710:12012.t02195:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4729 Score = 417 bits (905), Expect = e-115 Identities = 177/284 (62%), Positives = 219/284 (77%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L LSQ+KY D++K+ G+ CKP PTPLS++EKLS+ EG+ + D T YR +VGAL Sbjct: 3413 DGLVLSQDKYTHDILKRMGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGAL* 3592 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F+VNKVC FLH+PT H++A I+RY+++ L +GL KS S LVSAFS Sbjct: 3593 YLTLTRPDIAFSVNKVCQFLHSPTLTHWSAV*TIIRYLRNILGMGLKIQKSQSMLVSAFS 3772 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGC+DDRRST GFA+F G NLIS SARKQAT SRSS EA YKALANATAEVI V++ Sbjct: 3773 DADWAGCVDDRRSTSGFAVFLGSNLIS*SARKQATASRSSTEAEYKALANATAEVI*VKT 3952 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +LKELGI+ WCDN+ ATYLSAN +FHARTKHIE+DFHFV ERV KLL++RF+ Sbjct: 3953 LLKELGIQCPSMARLWCDNLSATYLSANPIFHARTKHIEVDFHFVRERVVQKLLEVRFVS 4132 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVKQAGSVRV 803 + DQVADGFTK+L Q +F+HNLNL K *LR V+ S R+ Sbjct: 4133 TNDQVADGFTKSLSFQKLHEFQHNLNLSKS*LRGAVRVEISFRI 4264 Score = 229 bits (494), Expect = 5e-59 Identities = 128/246 (52%), Positives = 149/246 (60%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT S N S+S T S TK KS SMCFVLA* LADK VA LSH + Sbjct: 4161 VKPSATWSLVETNLTSRSFCTTRSLTKWKSTSMCFVLA*NIGLADK*VALKLSHHNLAID 3982 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 IP+SF+ T +TSAVA A ALY AS+LDL+ VAC A ++RL P+N ANP V+ L Sbjct: 3981 GHCIPSSFNKVFT*ITSAVALAKALYSASVLDLDAVACLRAL*DIRLLPRNTANPLVDLL 3802 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS HPAQS E ALTS++ D PI + YL I A + VG CKN HTL T K Sbjct: 3801 SSTHPAQSASENALTSID*DFCILSPIPRIFLKYLIIV*TADQCVKVGECKNWHTLLTEK 3622 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 ISG V+V+Y*RAPT L LV S +PS D+FS +DKGVG GLQ P F S Sbjct: 3621 AISGRVNVRY*RAPTILL*LVASPGPKRLPSCTDNFSDVDKGVGAGLQVDIPILFNISCV 3442 Query: 1626 YFS*ER 1643 Y S*+R Sbjct: 3441 YLS*DR 3424 Score = 121 bits (259), Expect(2) = 1e-32 Identities = 72/187 (38%), Positives = 102/187 (54%) Frame = +2 / -1 Query: 827 NTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNV 1006 N+ P S L QV+I+ + K L T F + IS L+ NK N+++ + N SHKM+I NV Sbjct: 4240 NSPPQS*L*QVKIVLKFMKFLKTERFGEAISYLVISRNKSNLKKLLHNPFSHKMEINFNV 4061 Query: 1007 LCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSG 1186 LC MK + RQ+ + I+TP++ RA YT+ L* H F C I LV C RS Sbjct: 4060 LCPCMKYWVSRQISCTQIITPQSCHRRALYTKFL*QSFHLDYFCCCIGQSLVFCFCTRSR 3881 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 S LF+ +I S KY KPT +S+I SCP+ I + T+K R + ++ + + I Sbjct: 3880 CSSLFACTLGYKITS*KYSKPTSRSSIINTSCPIGI*ECTYKHRLRFLYLESHTKNISQI 3701 Query: 1367 SYYTLGS 1387 S L S Sbjct: 3700 SDNCLNS 3680 Score = 40.0 bits (81), Expect(2) = 1e-32 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = +2 / -1 Query: 1418 KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FF 1555 +L +L+ KG+IRS +CQ+L+S+ T V S + + F R*FF Sbjct: 3649 ELAYLIN*KGNIRSSQCQVLESSNNTPVISCISRT*KTPFLYR*FF 3512 Score = 54.2 bits (112), Expect(3) = 3e-20 Identities = 23/52 (44%), Positives = 33/52 (63%) Frame = -2 / +1 Query: 1250 WVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGY 1095 WVC I *S+ + C +TS+C I*+R R+QG +C+S S++G KG Y Sbjct: 3817 WVCCISRK*SYILECTQTSYCI*I*YRSRIQGFGQCNSRSNLGENFVKGTWY 3972 Score = 48.3 bits (99), Expect(3) = 3e-20 Identities = 33/105 (31%), Positives = 49/105 (46%) Frame = -2 / +1 Query: 1589 L*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTC 1410 L* + F+ RK I GR ++R *+Q S V D T*Y L G+ + Sbjct: 3478 L*ACANPFVNIRKIICTGRESFRSWRCN*LQEYCWSSLVPDIDST*YCLFS**GMPILAL 3657 Query: 1409 TNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRM 1275 + +L C +I E Y+ Y ++ ++ Y C+C RLGRM Sbjct: 3658 SYFDTLVCCLNNYQIFEKYSWYGTQDTEISVYACKCILRCRLGRM 3792 Score = 34.5 bits (69), Expect(3) = 3e-20 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 / +1 Query: 1049 HILVCQSSLSC*NKAH*DRFSFCVRESC 966 ++ VC ++SC +KAH* F FC R C Sbjct: 4018 NLFVC*PNISCKDKAH*S*FPFCERTGC 4101 Score = 57.9 bits (120), Expect(2) = 3e-08 Identities = 58/164 (35%), Positives = 73/164 (44%) Frame = -1 / +3 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L*V + GQD M + VGL YF ++I + + NK L DL +Q TR M Q Sbjct: 3750 LCL*VHSQMPIGQDVLMIEDLLVGLLYF*EVILYPRVHANKLLHLDLVQKQNTRLWPMQQ 3929 Query: 1137 LKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQIN 958 K C*R+ V A GV + CL FM QSTL+ I IL E L + Sbjct: 3930 QK*SR*KLC*RNLVYNARLWQDCGVII*VQLICLLTQYFMQGQSTLKLISIL*ENGLCRS 4109 Query: 957 SWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVL 826 LF+ K LM V + + I T S D*G +L Sbjct: 4110 FLRLDLFLLMTK*LMASPNRSVFRNFMNFSTILTCQSHD*GGLL 4241 Score = 27.6 bits (54), Expect(2) = 3e-08 Identities = 24/65 (36%), Positives = 30/65 (46%) Frame = -1 / +3 Query: 1638 LKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQ 1459 LK N+ +*+ + V+ L QKNYL K *+ L T V L S *H Sbjct: 3429 LKINIHMIY*REWVCRPVSLRQPLCQHQKNYLYRKGVF*VLEMQLITGVLLELSST*H*L 3608 Query: 1458 DLISP 1444 DLI P Sbjct: 3609 DLILP 3623 Score = 53.8 bits (111), Expect = 4e-06 Identities = 43/114 (37%), Positives = 53/114 (46%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLV 1155 L+QN N QCAL HE L QT+ + HT +Y PL +P L L H Sbjct: 4091 LSQNGNQLQCALSLHEILG*QTNKLHSNYHTTILP*TGIVYQVPLTKFSPRLLLLLHWPK 3912 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV* 1317 PC L *I Q LV + *D +I QTH H ILP+ + + H Q * Sbjct: 3911 PCILLLY*I*MQ*LVCVHSRI*DYFLEIQQTH**IFYHQHILPNRHLRMHLQA* 3750
>LOC_Os11g07650:12011.t00656:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4908 Score = 417 bits (905), Expect = e-115 Identities = 171/268 (63%), Positives = 216/268 (80%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+K+ G+ CK + TP++ ++KLSL EG+ + D T+YR +VGAL Sbjct: 3545 ENGIVLTQDKYANDLLKRVGMSDCKHSNTPMTVSDKLSLHEGSLLGDSDATQYRSIVGAL 3724 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC LHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 3725 QYLTLTRPDIAFSVNKVCQLLHAPTTVHWVAVKRILRYLKQCTCLGLKIHKSGSTLVSGF 3904 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAG LDDRRSTGGFA+F G NL+SWSARKQATVSRSS ++ YKA+ANATAE++WVQ Sbjct: 3905 SDADWAGSLDDRRSTGGFAVFLGSNLVSWSARKQATVSRSSTKSEYKAIANATAEIMWVQ 4084 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 ++L ELGIKS + WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV++KLL+I F+ Sbjct: 4085 TLLAELGIKSPQAAMIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSHKLLEIDFV 4264 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNL 854 S DQVADGFT+ L + + FK+NLNL Sbjct: 4265 SSGDQVADGFTEPLSERLLDRFKYNLNL 4348 Score = 253 bits (547), Expect = 3e-66 Identities = 136/243 (55%), Positives = 152/243 (62%) Frame = +3 / -1 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V PSAT*S E +SKSL TLS TK* S S+C VLA* T ADKY AP LSHQ Sbjct: 4296 VKPSAT*SPEETKSISKSL*LTLSLTK**STSICLVLA*NTGFADKYFAPRLSHQIIAA* 4117 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L IPNS CTH+ SAVAFA ALY +LDL+TVACFLA + R P+N ANPPV+ L Sbjct: 4116 GLLIPNSARRVCTHIISAVAFAIALYSDFVLDLDTVACFLALQDTRFDPRNTANPPVDLL 3937 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAK 1445 SS+ PAQS EK LT VE DL P C YL+I L A + TVVGAC N* TL T K Sbjct: 3936 SSKLPAQSASEKPLTRVEPDLWILSPKHVHCLRYLSILLTATQCTVVGACNN*QTLLTEK 3757 Query: 1446 EISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVA 1625 +SGLV VKY*RAPT LY V S PS R+S S+ GV LQ P F +S+A Sbjct: 3756 AMSGLVRVKY*RAPTILLYWVASLSPKRDPSCRESLSLTVIGVFECLQSDIPTLFNRSLA 3577 Query: 1626 YFS 1634 Y S Sbjct: 3576 YLS 3568 Score = 128 bits (275), Expect = 8e-29 Identities = 81/217 (37%), Positives = 112/217 (51%) Frame = +2 / -3 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 FCK I NLI NK N+ +F+ S ++ +Y N+ SSMK I + S I+ P+ Sbjct: 4300 FCKTICNLITRGNKINL*KFMTYPFSDEVIVYFNMFSSSMKHRIC**IFCSKIIAPDHCC 4121 Query: 1082 LRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*T 1261 LR F Q L+P++F C IC CLV A S GLFSS P I +K+ KPTC + Sbjct: 4120 LRTFNPQFCKKSLYPHNFCCCICNCLVLRFCAGSRYRGLFSSTPRY*I*PQKHSKPTCGS 3941 Query: 1262 SVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYS 1441 VI + P+ IR++T+ R L ++ + +F I Y + CM LT V Sbjct: 3940 PVIQTTSPIRIRETTN*SRT*LMDLKS*TCTLFEIPKYPFNCYPMYSCRCMQ*LTDFVNR 3761 Query: 1442 KGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*F 1552 KG +RS K ILKST T + S+ + SF +R F Sbjct: 3760 KGYVRSSKG*ILKSTNDTPILGSITISQKRSFMQREF 3650 Score = 73.0 bits (153), Expect(3) = 1e-18 Identities = 48/123 (39%), Positives = 64/123 (52%) Frame = -2 / +1 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V FY+ F * LG *Q +RWVC + S + C*KTSH I H+ VQG K Sbjct: 3877 VRFYSS*WFL*CGLGW*FG*QEIHRWVCCVSGVKSSILEC*KTSHGI*IQHKI*VQGNCK 4056 Query: 1145 CHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 C+S +++G + +G K S LV WS I + +S +SC*N +* R S R+ Sbjct: 4057 CNSRNYVGTNSSCRIGD*KSSSSNDLVR*SWSKIFISKSGVSC*N*TY*SRLSLRQRKGK 4236 Query: 965 K*T 957 *T Sbjct: 4237 S*T 4245 Score = 34.1 bits (68), Expect(3) = 1e-18 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = -2 / +1 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHS 1386 CSS+F+ Y T*+ L C Q + + CT + +L S Sbjct: 3718 CSSIFNPY*T*HSLFC*QSLSIIACTYNCTLGS 3816 Score = 24.4 bits (47), Expect(3) = 1e-18 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = -2 / +1 Query: 1637 SRKICNRLGKKAWPTRL*THTHSF 1566 +R+IC +K W RL T HS+ Sbjct: 3565 TRQICQ*SIEKGWYVRLQTFKHSY 3636 Score = 68.0 bits (142), Expect = 2e-10 Identities = 51/134 (38%), Positives = 65/134 (48%) Frame = -1 / +3 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V+ L++ G MT QVGL F I + G+LENKP + D A TR QM Q K Sbjct: 3897 VVSLMRIGLVVWMTGDPQVGLLCFWGQI*YLGVLENKPRYLDPAQNLSTRQLQMQQQKLC 4076 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G ++W K L+ SG +LE + I FMLE + L+* E+ IN Sbjct: 4077 GYKLFLQNWGLKVLKQQ*SGAIILEQNIYQQIRCFMLELNILK*TITSSEKG*VINF*RL 4256 Query: 945 GLFIQKIKLLMGLQ 904 LF IKL M LQ Sbjct: 4257 ILFPLVIKLQMVLQ 4298 Score = 64.3 bits (134), Expect = 2e-09 Identities = 46/135 (34%), Positives = 63/135 (46%) Frame = +1 / -2 Query: 901 LL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRE 1080 +L* H QLD + + +VY L ++++L Q F*HE D ++ LQ TR+ Sbjct: 4301 VL*NHLQLDHQRKQNQSLKVYDLPFL*RSDSLLQYV*F*HETPDLLINILLQDYRTRSLL 4122 Query: 1081 S*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLN 1260 F P P * L HL +PCT C I WLVF* + D + QTHL Sbjct: 4121 LEDF*SPILQEEFVPT*FLLLHLQLPCTQILCWI*IPWLVF*HSKILDLTPETQQTHLWI 3942 Query: 1261 VCHLGILPSLN*KKH 1305 CH P+ + + H Sbjct: 3941 SCHPNYQPNPHQRNH 3897
>LOC_Os10g04640:12010.t00348:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4343 Score = 417 bits (905), Expect = e-115 Identities = 173/273 (63%), Positives = 214/273 (78%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QE+YA+++VK+ ++ CK TPLS+ EKLS EG + D T+YR +VGALQYLTL Sbjct: 3522 LNQERYASEIVKRVSMENCKSVGTPLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTL 3701 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISF+VNKVC FL PTTVH+ KRI+RYVK TL +GL KS S +VSA+S++DW Sbjct: 3702 TRPDISFSVNKVCQFLQNPTTVHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADW 3881 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 A CLDD+RSTGGFA+F G NLISW+ARKQATVSRSS EA YKALANATAE++WV+ +L+E Sbjct: 3882 ADCLDDKRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEE 4061 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 LGI WCDN+GATYLS N VFHARTKHIEID+HFV E+VA K L ++F+ S+DQ Sbjct: 4062 LGISHPGPSQLWCDNIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFVPSQDQ 4241 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 VADGFTKAL + + F++NLNL+ L LR V+ Sbjct: 4242 VADGFTKALPVRQLQMFRNNLNLVDLRLRGSVR 4340 Score = 179 bits (385), Expect(2) = 7e-57 Identities = 95/181 (52%), Positives = 112/181 (61%) Frame = +3 / -2 Query: 1095 IPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSR 1274 IPNS S TH+ SAVA A+ALY AS+LDL+TVACFLA ++R P+ A PPV+ LSSR Sbjct: 4069 IPNSSSSFLTHIISAVALANALYSASVLDLDTVACFLAFQDIRFDPRKTAKPPVDLLSSR 3890 Query: 1275 HPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEIS 1454 AQS E ALT + D FRP V FTYL I L + TVVG +N* TL T K+IS Sbjct: 3889 QSAQSASE*ALTIFDEDFSTFRPSPKVPFTYLRILLTVAQCTVVGF*RN*QTLLTEKDIS 3710 Query: 1455 GLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 GLV VKY* APT Y V S PS D+FS +++GV LQ T S+AY S Sbjct: 3709 GLVKVKY*SAPTTLRY*VASFSPSFSPS*ADNFSTVERGVPTDLQFSMLTLLTISLAYLS 3530 Query: 1635 * 1637 * Sbjct: 3529 * 3527 Score = 63.4 bits (132), Expect(2) = 7e-57 Identities = 34/57 (59%), Positives = 39/57 (68%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 +A VNPSAT S + N + AT S TK* SIS+CFVLA*KT L D+ VAP LSH Sbjct: 4267 RALVNPSATWS*DGTNCSASCFCATCSLTK**SISICFVLA*KTGLTDR*VAPILSH 4097 Score = 88.6 bits (187), Expect(2) = 7e-23 Identities = 55/144 (38%), Positives = 74/144 (51%) Frame = +2 / -1 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRK 1300 HP+ F I C + C + L S P I S K CK +C + VI*A P+ IR Sbjct: 4043 HPHYFCSCISQCFILCFCT*P*HCSLLPSIPGY*I*S*KNCKASCRSFVI*AISPISIRI 3864 Query: 1301 STHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILK 1480 ST+ *T Q FHIS +L SC ++C W + KLT+L+ KG IRS Q+LK Sbjct: 3863 STYNI**RFFNF*TKPQGSFHISKDSLNSCPMHCCWILKKLTNLINRKGYIRSS*SQVLK 3684 Query: 1481 STYQTSVFSSVH*IYRCSFHER*F 1552 ++ T+V S + +F R*F Sbjct: 3683 CSHHTAVLSCIFLSKFLTFIGR*F 3612 Score = 40.0 bits (81), Expect(2) = 7e-23 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +2 / -1 Query: 962 ICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTP 1069 +CN S+K+ IYL + C MKD I R + + I+TP Sbjct: 4202 LCNLFSNKVIIYLYMFCPCMKDRINR*ISSTYIITP 4095 Score = 70.7 bits (148), Expect(2) = 1e-17 Identities = 40/127 (31%), Positives = 67/127 (52%) Frame = -2 / +2 Query: 1502 IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQV 1323 + G +S+ D T*Y+L C G+ V + +N+S+L +C ICE WSK ++ Sbjct: 3662 VPQCGGSTSILDFN*T*YILFC**GLSVSSESNNSALGNC*ENP*ICERNLGAWSKS*KI 3841 Query: 1322 PFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKC 1143 C+C F* LG +PR*Q R +C+ S+ + C*+ + ++ +R RV C Sbjct: 3842 FIKYCKCLF*C*LG*LPR*QKIYRRLCSFSRIKSNILEC*EAGYSVKVKYRSRV*SIG*C 4021 Query: 1142 HS*SHMG 1122 + +++G Sbjct: 4022 NCRNNVG 4042 Score = 40.0 bits (81), Expect(2) = 1e-17 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -2 / +2 Query: 1049 HILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 ++ +C S LSC +K + DR S C R C +V + R S W+++S Sbjct: 4115 YLSIC*SCLSCKDKTYRDRLSLC*RTGCTEATSTTVCTISRPSGRWIHQS 4264 Score = 32.7 bits (65), Expect(3) = 2e-07 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = -1 / +1 Query: 1311 L*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH 1153 L*VL L+ G A*MT Q LQ+F D I + G+L ++ +Q +H Sbjct: 3853 L*VLILMLIGLIA*MTKDLQEALQFF*DQI*YPGMLGSRLQCQGQVQKQSIKH 4011 Score = 30.9 bits (61), Expect(3) = 2e-07 Identities = 19/41 (46%), Positives = 22/41 (53%) Frame = -1 / +1 Query: 1506 LNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQFTSQL 1384 L+T VW F+ * DLI P L R VSF+ Q Q QL Sbjct: 3658 LSTAVWWEHFNT*L*LDLIYPFLLIRFVSFFRIQQQCIGQL 3780 Score = 29.5 bits (58), Expect(3) = 2e-07 Identities = 26/72 (36%), Positives = 35/72 (48%) Frame = -1 / +1 Query: 1038 LPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIS 859 L I SFM Q+ R*I L E L ++ + L+ K K M KL++ K I Sbjct: 4126 LLILSFMQGQNI*R*IITLLENRLHRSN*HYSLYHLKTKWQMDSPKLFLFGSYKCFVTIL 4305 Query: 858 T**SCD*GRVLN 823 *+ D*G VL+ Sbjct: 4306 IL*T*D*GGVLD 4341 Score = 29.9 bits (59), Expect(2) = 0.66 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +1 / -3 Query: 1336 LDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQV 1458 LDQ ++SHI ++ QL + L L +T+ P Q+R YQV Sbjct: 3828 LDQAPRFLSHI*GFS*QLPNALLLDSEETDKPY*QKRIYQV 3706 Score = 23.5 bits (45), Expect(2) = 0.66 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 / -3 Query: 1222 D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 D + + LQ+ L CHLG P+ + KH Q Sbjct: 3942 DLILEKLQSLL*IFCHLGNQPNQHQNKHLQ 3853
>LOC_Os02g32300:12002.t02873:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4329 Score = 415 bits (900), Expect = e-115 Identities = 171/270 (63%), Positives = 213/270 (78%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N L LSQEKY TDL+K+ + CKP TP+S +EKLSL +G + S D T+YR +VGALQ Sbjct: 3514 NGLILSQEKYVTDLLKRVNMDKCKPVSTPMSVSEKLSLHQGEVLASGDATRYRSIVGALQ 3693 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF VNKVC +LHAPTTVH+ A KRI+RY + T +GL +KSPS LV+ F+ Sbjct: 3694 YLTLTRPDISFLVNKVCQYLHAPTTVHWAAVKRILRYFQQTTKLGLKITKSPSFLVNGFT 3873 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG LDDRRSTGGFA++ G NL+SWSARKQATVSRSS EA YKALAN AE++W+Q+ Sbjct: 3874 DADWAGYLDDRRSTGGFAVYLGSNLVSWSARKQATVSRSSTEAEYKALANVIAELMWIQT 4053 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L+EL +++ + WCDN+GA YLSAN VFHARTKHI +D+HFV E V+ KLL+I FI Sbjct: 4054 LLRELRVQAPQAAKVWCDNLGAKYLSANPVFHARTKHIGVDYHFVREWVSRKLLEIEFIS 4233 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 S+DQVADGFTK+L + + F+HNLNL L Sbjct: 4234 SEDQVADGFTKSLTERQLKLFRHNLNLRSL 4323 Score = 190 bits (409), Expect(2) = 3e-62 Identities = 95/172 (55%), Positives = 114/172 (66%) Frame = +3 / -2 Query: 1125 HMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKA 1304 H+ SA+ A ALY AS+LDL+TVAC A HE RL P+ ANPPV+ LSSR PAQS K Sbjct: 4043 HINSAMTLAKALYSASVLDLDTVACLRALHETRLEPR*TANPPVDLLSSR*PAQSASVKP 3864 Query: 1305 LTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RA 1484 LT EGDL+ RP F VC+ YL I A +*TVVGAC+ HTLFT E+SGLV+V+Y A Sbjct: 3863 LTRNEGDLVILRPNFVVCWKYLRILFTAAQ*TVVGACRYWHTLFTKNEMSGLVNVRYCSA 3684 Query: 1485 PTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*E 1640 PT LYLV S ++ P +D+FS D GV GL F+KSV YFS*+ Sbjct: 3683 PTILLYLVASPDARTSP*CKDNFSDTDIGVLTGLHLSILTRFSKSVTYFS*D 3528 Score = 70.3 bits (147), Expect(2) = 3e-62 Identities = 35/57 (61%), Positives = 40/57 (70%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FVNPSAT*S E IN +S+S T S TK* S +C VLA* T LA++Y AP LSH Sbjct: 4271 KDFVNPSAT*SSEEINSISRSFLETHSRTK**STPICLVLA*NTGLAERYFAPKLSH 4101 Score = 153 bits (328), Expect = 4e-36 Identities = 101/262 (38%), Positives = 140/262 (53%) Frame = +2 / -1 Query: 854 QVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*I 1033 +VEI+ + * CK I NLIF* +K N EF N L+HKM I+ N+ S MK I Sbjct: 4314 KVEIVPKQL*LSLC*GLCKSIRNLIF*RDKFNF*EFP*NPLTHKMIIHPNMFGSGMKHWI 4135 Query: 1034 GRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP 1213 R++ S I+TP SLR +Q GL+P+ F I * L+ C S + LF+ P Sbjct: 4134 SRKIFCS*IITPYLCSLRRLNSQFSQQGLNPH*FGNDIS*GLIFCFCT*S*HCCLFTGTP 3955 Query: 1214 *NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCE 1393 *N +R+K KP+ +SVI* +CP+ I ++ +K R + + T + + IS +L SC Sbjct: 3954 *N*VRTKINSKPSSGSSVI*ITCPICISETINKK*RRFSNLKT*LCCLLEISQDSLYSCP 3775 Query: 1394 VNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RS 1573 +NCG M* L HL+Y + D+RS CQIL +Y TSV S+ S + *FF R Sbjct: 3774 MNCGRSM*ILAHLIY*E*DVRSG*CQIL*CSYYTSVPCSISRCKNFSLMQG*FF*Y*HRC 3595 Query: 1574 GCGFTTL*ARLFYQVCCIFFLR 1639 T + F +C I LR Sbjct: 3594 AYRLTLIHINSFQ*ICHILLLR 3529 Score = 53.8 bits (111), Expect(3) = 3e-24 Identities = 27/62 (43%), Positives = 36/62 (58%) Frame = -2 / +3 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 + F +C F * RLGR+ R*Q + VC + W * FM C TS+ +I +R R+ G S Sbjct: 3843 ISFISC*WFH*CRLGRLSR*QKIHWRVCCLSWF*PSFMECP*TSNSVKIKYRSRI*GLS* 4022 Query: 1145 CH 1140 CH Sbjct: 4023 CH 4028 Score = 49.2 bits (101), Expect(3) = 3e-24 Identities = 36/85 (42%), Positives = 43/85 (50%) Frame = -1 / +2 Query: 1638 LKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQ 1459 LK++M Q +* L + V+ L QKNY KE L T+V * +SI*H Sbjct: 3530 LKRSM*QIY*NELIWISVSL*AHLCQYQKNYPCIKEKFLHLEMLQGTEV**EHYSI*H*P 3709 Query: 1458 DLISPLL*TRCVSFYMHQPQFTSQL 1384 DL S * RC S YM PQF QL Sbjct: 3710 DLTSHS**IRCASIYMLLPQFIGQL 3784 Score = 47.8 bits (98), Expect(3) = 3e-24 Identities = 22/50 (44%), Positives = 29/50 (58%) Frame = -2 / +3 Query: 1052 SHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 S I C SS+SC N+ + SFC K T + +Y F+RSSC W+YK Sbjct: 4116 SKISFC*SSVSCQNQTYWGGLSFCA*VGFKETPRN*IYLFRRSSCGWIYK 4265 Score = 72.1 bits (151), Expect(2) = 1e-20 Identities = 52/131 (39%), Positives = 63/131 (48%) Frame = -1 / +2 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+Q GQ *MT+ GL + L L FHG+ NK D +Q R * M G Sbjct: 3872 LMQIGQVI*MTEDPLEGLLFILVLT*FHGVPVNKQQCQDQVQKQNIRP*LMSLPN*CGFR 4051 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLF 937 PC + K L+L GV + E + L I FM E + L I ILC Q NS L Sbjct: 4052 PCCEN*EFKRLKLQRYGVII*EQNIFLLIQCFMPEPNILGWIIILCVSGFQGNS*KLNLS 4231 Query: 936 IQKIKLLMGLQ 904 +QKIKL M LQ Sbjct: 4232 LQKIKLRMDLQ 4264 Score = 48.7 bits (100), Expect(2) = 1e-20 Identities = 26/70 (37%), Positives = 39/70 (55%) Frame = -2 / +3 Query: 1574 HSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSS 1395 H+++ RK I R + Y +Q R ++V D +T*+L+ K GV V TC+ HSS Sbjct: 3594 HTYVSIRKIILASRRSSCIWRCYKVQKYSRSTTVSDINQT*HLILSK*GVPVSTCSYHSS 3773 Query: 1394 LHSCQAYSKI 1365 L SC+ +I Sbjct: 3774 LGSCKENPEI 3803 Score = 42.3 bits (86), Expect = 0.010 Identities = 24/58 (41%), Positives = 32/58 (55%) Frame = +1 / -3 Query: 895 VKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 ++ L* H QLDLL * + V L+ + QN+N Q F HE LD Q + L + HT Sbjct: 4273 LRTL*IHPQLDLLKR*IQFLGVSLKPTHAQNDNPPQYVWFWHETLD*QKDILLLNYHT 4100
>LOC_Os02g30350:12002.t02728:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2713 Score = 236 bits (509), Expect(2) = e-115 Identities = 95/137 (69%), Positives = 112/137 (81%) Frame = -3 / +2 Query: 1261 RSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSK 1082 +STGGFA+F G NLISWSARKQ TVSRSS EA YKALANATAE++WVQ +L ELG+K Sbjct: 1061 KSTGGFAVFLGSNLISWSARKQPTVSRSSTEAEYKALANATAEIMWVQKVLDELGVKHPL 1240 Query: 1081 TPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTK 902 C WCDN+GA YLSAN +FHARTKHIE+DFHFV E+V+ KLLDIRFI + DQ+ADGFTK Sbjct: 1241 AACLWCDNLGAKYLSANPIFHARTKHIELDFHFVREQVSRKLLDIRFISTSDQLADGFTK 1420 Query: 901 ALRTQSFEDFKHNLNLI 851 AL + +F+ NLNL+ Sbjct: 1421 ALPVRQLGEFRRNLNLV 1471 Score = 200 bits (431), Expect(2) = e-115 Identities = 81/132 (61%), Positives = 107/132 (81%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K+ L + QE+YA DL+K+ +Q KP TPLSS+EKLS+ EG + D+T+YR +VGAL Sbjct: 667 KDGLLV*QERYAMDLLKRVAMQNSKPVNTPLSSSEKLSIHEGEKLGPEDSTRYRSIVGAL 846 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF+VNKVC*FLH PTTVH+ A KRI+RY++ T+++GL F+++ S LVSAF Sbjct: 847 QYLTLTRPDISFSVNKVC*FLHCPTTVHWAAVKRILRYIQGTVSLGLKFNQASSMLVSAF 1026 Query: 1297 SNSDWAGCLDDR 1262 S++DWAGC DD+ Sbjct: 1027 SDADWAGCPDDK 1062 Score = 160 bits (344), Expect(2) = 1e-70 Identities = 76/121 (62%), Positives = 86/121 (71%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 +AFVNPSA *S +NRMS SL T S TK*KS S+C VLA* LADKY+AP LSH K Sbjct: 1425 RAFVNPSAN*SLVLMNRMSNSLRDTCSRTK*KSSSICLVLA*NIGLADKYLAPRLSHHKH 1246 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 PNS S CTH+ SAVA ASALY AS+LDLETV CFLA E++L P+N ANPPV Sbjct: 1245 AANGCLTPNSSSTFCTHIISAVALASALYSASVLDLETVGCFLALQEIKLLPRNTANPPV 1066 Query: 1257 E 1259 + Sbjct: 1065 D 1063 Score = 127 bits (273), Expect(2) = 1e-70 Identities = 68/124 (54%), Positives = 78/124 (62%) Frame = +3 / -3 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS HPAQS EKALTS+E L RP +V + Y +I A + TVVG C+N*HTL T Sbjct: 1061 LSSGHPAQSASEKALTSIEEA*LNLRPRLTVPWIYRSILFTAAQWTVVGQCRN*HTLLTE 882 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSV 1622 KEISG V V+Y* APT LYLV S+ PS DSFS DKGV GL C +KS+ Sbjct: 881 KEISGRVRVRY*SAPTILLYLVESSGPNFSPSCIDSFSEDDKGVLTGLLFCIATLLSKSM 702 Query: 1623 AYFS 1634 AY S Sbjct: 701 AYLS 690 Score = 100 bits (214), Expect(2) = 2e-36 Identities = 56/134 (41%), Positives = 75/134 (55%) Frame = +2 / -1 Query: 854 QVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*I 1033 QVEI ++ K S CK I LI ++PNVQ+ + S+K+KI N+ MK I Sbjct: 1468 QVEIAPKLTKLTHWQSLCKSIC*LITSTDEPNVQQLA*HLFSNKVKIKFNMFSPCMKYRI 1289 Query: 1034 GRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP 1213 RQ+ GS I+TP+T +Q + H L+P+ F I C V RS NSGLFSS P Sbjct: 1288 SRQIFGSKIITPQTCCQWMLNSQFIKHLLYPHYFCSCISKCFVFGFCTRSRNSGLFSSTP 1109 Query: 1214 *NEIRSKKYCKPTC 1255 N+I SKK+ K +C Sbjct: 1108 RNQITSKKHSKSSC 1067 Score = 73.0 bits (153), Expect(2) = 2e-36 Identities = 35/79 (44%), Positives = 48/79 (60%) Frame = +2 / -2 Query: 1265 VI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSK 1444 VI ASCP+ IR+ST+K RR L + T I Y+L C ++C M*KLTHL+ + Sbjct: 1059 VIWASCPICIRESTYKHRRSLIKFETKTDCSLDIPKYSLHCCPMDCSRTM*KLTHLINRE 880 Query: 1445 GDIRSCKCQILKSTYQTSV 1501 +I C+ +ILK T TS+ Sbjct: 879 RNIWPCESKILKCTNNTSI 823 Score = 93.6 bits (198), Expect(3) = 1e-32 Identities = 47/117 (40%), Positives = 67/117 (57%) Frame = -2 / +1 Query: 1253 RWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSL 1074 R +C + W * F+ C*KT+HCF I*+R R+Q T C+ +++G A +G S+ Sbjct: 1069 RRICCVSWK*FDFLEC*KTTHCF*I*YRSRIQSTC*CNCRNNVGTKGA**IGS*ASIGSM 1248 Query: 1073 FLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 F+V* WS I VC S +SC + +* FS C R +GHSV+ + S W+YK Sbjct: 1249 FVV**SWSQIFVC*SYISCKD*TY*T*FSLCSRTGVTQAVGHSVHQY**SVSRWIYK 1419 Score = 62.5 bits (130), Expect(3) = 1e-32 Identities = 29/74 (39%), Positives = 42/74 (56%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C+S+ ++ Y C GVLV T + +S L S + + + ++ WS+ FY C+ Sbjct: 840 CTSISYSHTARYFFLC**GVLVSTLSYYSPLGSSEENTSVYPRNSQSWSQI*SSFFYACK 1019 Query: 1304 CFF*FRLGRMPR*Q 1263 CF * RLGRMPR*Q Sbjct: 1020 CFL*CRLGRMPR*Q 1061 Score = 23.1 bits (44), Expect(3) = 1e-32 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 / +3 Query: 1649 TSSFSRKICNRLGKKAWPTRL*THTHSFI*YRKTI 1545 +SS +RK+C+ L K *T ++F+ KT+ Sbjct: 675 SSSMTRKVCHGLA*KGSNAE**TS*YTFVIL*KTV 779 Score = 47.3 bits (97), Expect(3) = 7e-15 Identities = 29/73 (39%), Positives = 36/73 (49%) Frame = -1 / +3 Query: 1074 VSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 V GV +LEP+ CL I FM + L IF L E + WTFG + I M LQ+L Sbjct: 1248 VCGVIILEPNICLLILYFMQGLNILNLIFTLFENRCHASCWTFGSSVLVIS*QMDLQRLC 1427 Query: 894 VHKVLKTSNIIST 856 L + IST Sbjct: 1428 QCVNLVSLGAIST 1466 Score = 44.6 bits (91), Expect(3) = 7e-15 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = -1 / +3 Query: 1254 QVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSW 1099 Q L FL++I F G+LEN PLF DL + T+H M K G C +W Sbjct: 1068 QEDLLCFLEVI*FLGVLENNPLFLDLVQKPNTKHLLMQLQK*CGYKRCLMNW 1223 Score = 26.7 bits (52), Expect(3) = 7e-15 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 / +2 Query: 1320 LLHL*VLFLIQTGQDA*MT 1264 LL L*VL L+Q GQDA MT Sbjct: 1004 LLCL*VLSLMQIGQDAQMT 1060 Score = 47.8 bits (98), Expect(2) = 2e-10 Identities = 28/74 (37%), Positives = 45/74 (60%) Frame = +1 / -1 Query: 1264 CHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQ 1443 CHLGILP+L+ +KH Q *K * DQ ++ + +++ L + L +V+TNTP Q+ Sbjct: 1060 CHLGILPNLHQRKHLQA*KKLD*I*DQD*LFLGYTEVFSSLLPNGL**DNVETNTPY*QR 881 Query: 1444 RRYQVL*VSNTEEH 1485 ++Y +* + E H Sbjct: 880 KKYLAV*E*DIEVH 839 Score = 44.1 bits (90), Expect(2) = 2e-10 Identities = 31/81 (38%), Positives = 39/81 (48%) Frame = +1 / -3 Query: 832 PSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCAL 1011 P++ T *D *+ Q + L* H D *TECP + L Q+EN Q Sbjct: 1490 PAIPTQEPG*DCA*THQVDALAEPL*IHLLTDH*Y**TECPTACVTPVLEQSENQVQYV* 1311 Query: 1012 F*HERLDWQTSMWLQHCHTRN 1074 HE D QT++WLQ HT N Sbjct: 1310 SLHEI*D*QTNIWLQDYHTTN 1248
>LOC_Os08g41020:12008.t03832:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4390 Score = 413 bits (896), Expect = e-114 Identities = 173/278 (62%), Positives = 218/278 (78%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 + L L+QE+YA D++K+ G+ CKP TPL +EKL L +G + + D ++YR +VGAL Sbjct: 3554 EKGLLLTQERYAGDIIKRTGMSNCKPVSTPLCVSEKLWLNDGEFLGANDASQYRSIVGAL 3733 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF+VNKVC FL PT VH+ A KRI+RY++ TL +GL KS S +VSAF Sbjct: 3734 QYLTLTRPDISFSVNKVCQFLQNPTIVHWAAVKRILRYLQGTLGLGLKIDKSFSYIVSAF 3913 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFA+F G NLISWSARKQA+VSRSS EA YKALANATAEV+WV+ Sbjct: 3914 SDADWAGCLDDRRSTGGFAVFLGSNLISWSARKQASVSRSSTEAEYKALANATAEVMWVR 4093 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 +L+E+G+ WCDN+GATYLSAN VFHARTKHIE+D+HFV E+VA K+L+IRF+ Sbjct: 4094 KLLEEIGLLHPGPSQLWCDNIGATYLSANPVFHARTKHIEVDYHFVREQVAQKMLEIRFV 4273 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 S+DQ+ADGFTK L + + F +NLNL +L LR V+ Sbjct: 4274 PSQDQIADGFTKPLPVRQLQLFCNNLNLGELRLRGSVR 4387 Score = 179 bits (386), Expect(2) = 6e-58 Identities = 94/179 (52%), Positives = 110/179 (61%) Frame = +3 / -2 Query: 1098 PNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRH 1277 P S S TH+TSAVA A ALY AS+L+ +T ACFLA +++ P+N A PPV+ LSSRH Sbjct: 4113 PISSSNLRTHITSAVALAKALYSASVLERDTEACFLALQDIKFDPRNTAKPPVDLLSSRH 3934 Query: 1278 PAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISG 1457 PAQS EKALT E DL F P V YL+I A + T+VG CKN*HTL T K++SG Sbjct: 3933 PAQSASEKALTI*EKDLSIFNPRPRVPCRYLSILFTAAQCTIVGFCKN*HTLLTEKDMSG 3754 Query: 1458 LVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 LV VKY RAPT LY + S PS SFS +GV GLQ P S AY S Sbjct: 3753 LVRVKYCRAPTILLY*LASFAPKNSPSFNHSFSDTQRGVLTGLQLLIPVLLIISPAYLS 3577 Score = 66.6 bits (139), Expect(2) = 6e-58 Identities = 35/57 (61%), Positives = 38/57 (66%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 + FVNPSA *S + NR+S AT S TK S SMCFVLA* T ADK VAP LSH Sbjct: 4314 RGFVNPSAI*SCDGTNRISNIFCATCSLTKW*STSMCFVLA*NTGFADK*VAPILSH 4144 Score = 72.1 bits (151), Expect(2) = 7e-26 Identities = 45/139 (32%), Positives = 69/139 (49%) Frame = +2 / -1 Query: 1097 TQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*A 1276 T L * +P+ S I + R+ L P +I S+KYCK + + VI* Sbjct: 4114 TNLF*QFTNPHYLSSCISQGFIFGFSTRA*YRSLLPGTPGYQI*SQKYCKTSSRSPVI*T 3935 Query: 1277 SCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIR 1456 SCPV IR+ST+ R+G +*+ + IS Y+L C + +*+LTH + + + Sbjct: 3934 SCPVCIRESTNNIRKGFVNL*S*TKSTLQISKYSLYCCPMYNSRIL*ELTHFIN*ERYVW 3755 Query: 1457 SCKCQILKSTYQTSVFSSV 1513 SCK +L S T V + + Sbjct: 3754 SCKS*VL*SPNDTPVLTGI 3698 Score = 66.6 bits (139), Expect(2) = 7e-26 Identities = 31/55 (56%), Positives = 36/55 (65%) Frame = +2 / -1 Query: 905 CKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTP 1069 CK ISNLI * NKPN Q F+ + S KM I+ V CSSMK I Q+ SNI+TP Sbjct: 4306 CKSISNLIL*RNKPNFQHFLRHLFSDKMVIHFYVFCSSMKHRIC*QIGSSNIITP 4142 Score = 63.8 bits (133), Expect(2) = 7e-20 Identities = 39/82 (47%), Positives = 46/82 (56%) Frame = -1 / +3 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GV +LE C I FMLEQ+T + I IL E + W FGLF KIKLLM LQ L++ Sbjct: 4143 GVIILELPICQQILCFMLEQNT*KWITILSENRWRRKCWKFGLFRHKIKLLMDLQSLFL* 4322 Query: 888 KVLKTSNIIST**SCD*GRVLN 823 S IS S D*G VL+ Sbjct: 4323 DNYNCSVTISILES*D*GGVLD 4388 Score = 54.7 bits (113), Expect(2) = 7e-20 Identities = 37/121 (30%), Positives = 59/121 (48%) Frame = -2 / +1 Query: 1481 SSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCEC 1302 S+V ++YKT ++ V V T + + +L S + + I Y+ K Q+ F C C Sbjct: 3730 STVLNSYKTRHIFLS**SVSVLTESYYCTLGSSKENT*ISARYSWSRIKD*QILFLYC*C 3909 Query: 1301 FF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 F * RLGRM R*Q C+I + C + S C +*+ R+ C+ * ++G Sbjct: 3910 FL*CRLGRMSR*QEIYWRFCSISGIKFDILECQEASFCITL*Y*SRI*SLG*CNC*GNVG 4089 Query: 1121 A 1119 + Sbjct: 4090 S 4092 Score = 60.6 bits (126), Expect(2) = 1e-15 Identities = 26/57 (45%), Positives = 36/57 (63%) Frame = -2 / +1 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 +V* WS++ V +S +SC*NK H FC R +G+SV S RS+C*W+YK+ Sbjct: 4141 MV**YWSYLFVSKSCVSC*NKTHRSGLPFCQRTGGAENVGNSVCSVTRSNC*WIYKA 4311 Score = 43.2 bits (88), Expect(2) = 1e-15 Identities = 30/77 (38%), Positives = 40/77 (51%) Frame = -1 / +3 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 +P L L VL L+QTGQD *MT LQYF D I + G+ +K L+ L + + Sbjct: 3885 NPFLILLVLSLMQTGQDV*MTGDLLEVLQYFWDQI*YPGVPGSKLLYHALVLKPNIKPWL 4064 Query: 1146 MPQLKSYGCNPC*RSWV 1096 M L+ G C*+ V Sbjct: 4065 MQLLR*CGFVNC*KRLV 4115 Score = 55.6 bits (115), Expect(2) = 1e-09 Identities = 34/82 (41%), Positives = 42/82 (51%) Frame = +1 / -3 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 +*H I+TL *D ++ + L* HQQ DL+ E TE P L QN N Sbjct: 4388 I*HSPSISTLQD*DCYRTIVIVSQEEAL*IHQQFDLVTEQTEFPTFSAPPVL*QNGNPLL 4209 Query: 1003 CALF*HERLDWQTSMWLQHCHT 1068 C LF*HE D T+ LQ+ HT Sbjct: 4208 CVLF*HETQDLLTNR*LQYYHT 4143 Score = 34.5 bits (69), Expect(2) = 1e-09 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = +1 / -3 Query: 1228 VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYA 1380 + +ILQ CHL ILPSL+ +KH Q K C +L Y++ I +++ Sbjct: 3983 IPEILQNLQ*ISCHLDILPSLHQRKH*QYKKRICQSLILDQEYLADI*VFS 3831
>LOC_Os01g54290:12001.t04846:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4386 Score = 411 bits (892), Expect = e-114 Identities = 172/278 (61%), Positives = 217/278 (78%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 + L L+QE+YA D++K+ G+ CKP TPL +EKL +G + + D ++YR +VGAL Sbjct: 3550 EKGLLLTQERYAGDIIKRTGMSNCKPVSTPLCVSEKLWSNDGEFLGANDASQYRSIVGAL 3729 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDISF+VNKVC FL PT VH+ A KRI+RY++ TL +GL KS S +VSAF Sbjct: 3730 QYLTLTRPDISFSVNKVCQFLQNPTIVHWAAVKRILRYLQGTLGLGLKIDKSLSYIVSAF 3909 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S++DWAGCLDDRRSTGGFA+F G NLISWSARKQATVSRSS EA YKALANATAEV+WV+ Sbjct: 3910 SDADWAGCLDDRRSTGGFAVFLGSNLISWSARKQATVSRSSTEAEYKALANATAEVMWVR 4089 Query: 1117 SMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFI 938 +L+E+G+ WCDN+GATYLSAN +FHARTKHIE+D+HFV E+VA K+L+IRF+ Sbjct: 4090 KLLEEIGLLHPGPSQLWCDNIGATYLSANPMFHARTKHIEVDYHFVREQVAQKMLEIRFV 4269 Query: 937 HSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 S+DQ+ADGFTK L + + F +NLNL +L LR V+ Sbjct: 4270 PSQDQIADGFTKPLPVRQLQLFCNNLNLGELRLRGSVR 4383 Score = 181 bits (390), Expect(2) = 2e-58 Identities = 95/179 (53%), Positives = 111/179 (62%) Frame = +3 / -2 Query: 1098 PNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRH 1277 P S S TH+TSAVA A ALY AS+L+ +TVACFLA +++ P+N A PPV+ LSSRH Sbjct: 4109 PISSSNLRTHITSAVALAKALYSASVLERDTVACFLALQDIKFDPRNTAKPPVDLLSSRH 3930 Query: 1278 PAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISG 1457 PAQS EKALT E DL F P V YL+I A + T+VG CKN*HTL T K++SG Sbjct: 3929 PAQSASEKALTI*ERDLSIFNPRPRVPCRYLSILFTAAQCTIVGFCKN*HTLLTEKDMSG 3750 Query: 1458 LVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 LV VKY RAPT LY + S PS SFS +GV GLQ P S AY S Sbjct: 3749 LVRVKYCRAPTILLY*LASFAPKNSPSFDHSFSDTQRGVLTGLQLLIPVLLIISPAYLS 3573 Score = 66.6 bits (139), Expect(2) = 2e-58 Identities = 31/55 (56%), Positives = 36/55 (65%) Frame = +2 / -1 Query: 905 CKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTP 1069 CK ISNLI * NKPN Q F+ + S KM I+ V CSSMK I Q+ SNI+TP Sbjct: 4302 CKSISNLIL*RNKPNFQHFLRHLFSDKMVIHFYVFCSSMKHRIC*QIGSSNIITP 4138 Score = 77.1 bits (162), Expect(2) = 1e-26 Identities = 47/139 (33%), Positives = 71/139 (51%) Frame = +2 / -1 Query: 1097 TQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*A 1276 T L * +P+ FS I + R+ S L P +I S+KYCK + + VI* Sbjct: 4110 TNLF*QFTNPHYFSSCISQGFIFGFSTRA*YSSLLPGTPGYQI*SQKYCKTSSRSPVI*T 3931 Query: 1277 SCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIR 1456 SCPV IR+ST+ R+G +*+ + IS Y+L C + +*+LTH + + + Sbjct: 3930 SCPVCIRESTNNIRKGFVNL*S*TKSTLQISKYSLYCCPMYNSRIL*ELTHFIN*ERYVW 3751 Query: 1457 SCKCQILKSTYQTSVFSSV 1513 SCK +L S T V + + Sbjct: 3750 SCKS*VL*SPNDTPVLTGI 3694 Score = 63.8 bits (133), Expect(2) = 1e-26 Identities = 34/57 (59%), Positives = 37/57 (64%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 + FVNPSA *S + NR+S AT S TK S SMCFVLA* ADK VAP LSH Sbjct: 4310 RGFVNPSAI*SCDGTNRISNIFCATCSLTKW*STSMCFVLA*NIGFADK*VAPILSH 4140 Score = 62.5 bits (130), Expect(2) = 9e-22 Identities = 39/121 (32%), Positives = 62/121 (51%) Frame = -2 / +3 Query: 1481 SSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCEC 1302 S+V ++YKT ++ V V T + + +L S + + I Y+ K Q+PF C C Sbjct: 3726 STVLNSYKTRHIFLS**SVSVLTESYYCTLGSSKENT*ISARYSWSRIKD*QIPFLYC*C 3905 Query: 1301 FF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 F * RLGRM R*Q C+I + C + S+C +*+ R+ C+ *S++G Sbjct: 3906 FL*CRLGRMSR*QEIYWRFCSISGIKFDILECQEASYCITL*Y*SRI*SLG*CNC*SNVG 4085 Query: 1121 A 1119 + Sbjct: 4086 S 4088 Score = 62.5 bits (130), Expect(2) = 9e-22 Identities = 38/82 (46%), Positives = 46/82 (56%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GV +LE C I FMLEQ+T + I IL E + W FGLF KIKLLM LQ L++ Sbjct: 4139 GVIILELPICQQILCFMLEQNT*KWITILSENRWRRKCWKFGLFRHKIKLLMDLQSLFL* 4318 Query: 888 KVLKTSNIIST**SCD*GRVLN 823 S IS + D*G VL+ Sbjct: 4319 DNYNCSVTISILEN*D*GGVLD 4384 Score = 60.2 bits (125), Expect(2) = 8e-16 Identities = 26/57 (45%), Positives = 36/57 (63%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKS 900 +V* WS++ V +S +SC*NK H FC R +G+SV S RS+C*W+YK+ Sbjct: 4137 MV**YWSYLFVSKSYVSC*NKTHRSGLPFCQRTGGAENVGNSVCSVTRSNC*WIYKA 4307 Score = 44.6 bits (91), Expect(2) = 8e-16 Identities = 31/77 (40%), Positives = 40/77 (51%) Frame = -1 / +2 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 +P L L VL L+QTGQD *MT LQYF D I + G+ +K L+ L + + Sbjct: 3881 NPFLILLVLSLMQTGQDV*MTGDLLEVLQYFWDQI*YPGVPGSKLLYHALVLKPNIKPWL 4060 Query: 1146 MPQLKSYGCNPC*RSWV 1096 M LK G C*+ V Sbjct: 4061 MQLLK*CGFVNC*KRLV 4111 Score = 51.9 bits (107), Expect(2) = 1e-09 Identities = 33/82 (40%), Positives = 41/82 (50%) Frame = +1 / -3 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 +*H I+ L *D ++ + L* HQQ DL+ E TE P L QN N Sbjct: 4384 I*HSPSISILQD*DCYRTIVIVSQEEAL*IHQQFDLVTEQTEFPTFSAPPVL*QNGNPLL 4205 Query: 1003 CALF*HERLDWQTSMWLQHCHT 1068 C LF*HE D T+ LQ+ HT Sbjct: 4204 CVLF*HET*DLLTNR*LQYYHT 4139 Score = 38.2 bits (77), Expect(2) = 1e-09 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +1 / -3 Query: 1228 VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYA 1380 + +ILQ CHL ILPSL+ +KH Q KG C +L Y++ I +++ Sbjct: 3979 IPEILQNLQ*ISCHLDILPSLHQRKH*QYKKGICQSLILDQEYLADI*VFS 3827
>LOC_Os03g24620:12003.t02156:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4802 Score = 410 bits (889), Expect = e-113 Identities = 169/277 (61%), Positives = 214/277 (77%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA DL+K+ G+ CKP LS++EKL+L EG + D + YR +VGALQ Sbjct: 3433 NGIILTQEKYANDLLKRVGMIDCKPVSASLSTSEKLTLHEGDLLGLNDASNYRSVVGALQ 3612 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F VNKVC FLHAPTT+H+ KRI+RY+K +GL SKS S LVS +S Sbjct: 3613 YLTLTRPDIAFPVNKVCQFLHAPTTIHWATVKRILRYLKQCTKLGLKISKSKSMLVSGYS 3792 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG +DDRRST GFA+F G NL+SW+ARKQATVSRSS E+ YK LANATAE++W+Q+ Sbjct: 3793 DTDWAGNVDDRRSTRGFAVFLGDNLVSWNARKQATVSRSSTESEYKVLANATAEIMWIQT 3972 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L ELG+ S WCDN+GA YLS+N VFHARTKHIE+D+HFV ERV +LL++ F+ Sbjct: 3973 LLAELGVSSPLMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVQRRLLEVDFVP 4152 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 + DQVADGFTKAL + E+FK+NLNL +L*LR V+ Sbjct: 4153 TGDQVADGFTKALSVRQLENFKYNLNLGRL*LRGSVR 4263 Score = 270 bits (584), Expect = 2e-71 Identities = 139/249 (55%), Positives = 160/249 (64%) Frame = +3 / -1 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KAFVNPSAT*S S +L TLS TK* S S+C VLA*KT L DKY+AP LSH Sbjct: 4190 KAFVNPSAT*SPVGTKSTSSNLRCTLSRTK**STSICLVLA*KTGLDDKYLAPRLSHHNL 4011 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L P+S + C HM SAVA A+ LY S+LDLETVACFLA E +L P+N A P V Sbjct: 4010 AIRGLETPSSANKVCIHMISAVALANTLYSDSVLDLETVACFLAFQETKLSPRNTAKPLV 3831 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS PAQS E LTS++ DLL F+P CF YL+I +* VVGACKN*HTLF Sbjct: 3830 DLLSSTFPAQSVSEYPLTSIDFDLLIFKPSLVHCFKYLSILFTVAQ*IVVGACKN*HTLF 3651 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K ISGLV VKY* APT L L S PS + SFS++D GLQ P F+K Sbjct: 3650 TGKAISGLVRVKY*SAPTTLL*LEASLRPNKSPSCKVSFSLVDNDALTGLQSIMPTRFSK 3471 Query: 1617 SVAYFS*ER 1643 S+AYFS* R Sbjct: 3470 SLAYFS*VR 3444 Score = 155 bits (333), Expect = 8e-37 Identities = 103/270 (38%), Positives = 140/270 (51%) Frame = +2 / -3 Query: 827 NTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNV 1006 NT P SQ +EI+ ++ *S C+ IS LI NK + ++ S S+KM I LN+ Sbjct: 4260 NTPPQSQST*IEIVLKIL*LPYR*SLCESISYLISCRNKIHFKQPALYSFSYKMIINLNM 4081 Query: 1007 LCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSG 1186 SMK+ I Q+ + I+TP G R TQ GL+P+DF C + LV AR Sbjct: 4080 FSPSMKNRIR*QIFSTKIITP*PGH*RTRNTQFCQ*GLYPHDFCCSVGQYLVF*FSARPR 3901 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 N GLFS P N+I S K+CK +C +S+I SCP+ I ST+K R L +*T +F I Sbjct: 3900 NCGLFSCVPRNQIIS*KHCKTSCRSSIIYISCPICI*ISTYKHRL*LTNL*TKFSTLF*I 3721 Query: 1367 SYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER 1546 S Y S +N M KLT+LV+ K +I + ILK + TS+ + + SF + Sbjct: 3720 S*YPFHSSPMNRSRSMQKLTYLVHWKSNIWPSQS*ILKCSNYTSIIRGIIETQQISFMQS 3541 Query: 1547 *FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 +R*R FT A V IFFL Sbjct: 3540 ELLTSR*RCTYRFTINHANSLQ*VISIFFL 3451 Score = 101 bits (215), Expect(2) = 1e-22 Identities = 77/181 (42%), Positives = 95/181 (52%) Frame = -1 / +2 Query: 1437 *TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDV 1258 *TR VSF M +F L *D+*N LV* S L L*V IQ GQ+ *M + Sbjct: 3650 *TRYVSFCMLLLRFIGLL*KGY*DI*NSVLNLV*RLVSQSLCL*VDIQIQIGQEM*MIED 3829 Query: 1257 QQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRL 1078 Q LQ F ++I F G EN+P F LA Q TR+ Q KS G P ++WV L Sbjct: 3830 LQEVLQCF*EIIWFLGTQENRPQFLGLALNQNTRYWPTLQQKSCGYRPYWQNWVFLVL*W 4009 Query: 1077 PVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKL 898 P GV +L + C I FML + LR I IL E+E + LF+Q+IK LM Q+L Sbjct: 4010 PGYGVIILVLNICHLILFFMLGLNILRLIIILYEKEYNAGCLKWILFLQEIK*LMDSQRL 4189 Query: 897 Y 895 Y Sbjct: 4190 Y 4192 Score = 26.7 bits (52), Expect(2) = 1e-22 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 / +2 Query: 1653 MHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKE 1531 M LKKNM T+* LA +VN Y + ++ L KE Sbjct: 3434 MALFLLKKNMLMTY*SELA*LIVNL*VHRYRLVRSSLCMKE 3556 Score = 71.2 bits (149), Expect(3) = 6e-20 Identities = 41/119 (34%), Positives = 63/119 (52%) Frame = -2 / +3 Query: 1481 SSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCEC 1302 +SVF++ Y +QG+ VF C+ + SL C+ +KI +T W K V Y C+ Sbjct: 3606 TSVFNSD*ARYCFSSEQGMSVFACSYYDSLGYCEKDTKIFKTVY*TWFKD**VKVYACKW 3785 Query: 1301 FF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 F +RLGR R* + C++ * F+ KT H F +*H R+QG + +S +H+ Sbjct: 3786 IFRYRLGRKCR**KIYKRFCSVSRR*FGFLERKKTGHSF*V*H*IRIQGIGQRYSRNHV 3962 Score = 42.3 bits (86), Expect(3) = 6e-20 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSF 897 +V* W I V S SC*+ +* SFC R+S S++RSS *W++K F Sbjct: 4017 MV**SWC*IFVI*SCFSC*D*TY*G*LSFCTRKSTTQVA*SGFCSYRRSSS*WIHKGF 4190 Score = 22.6 bits (43), Expect(3) = 6e-20 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -2 / +3 Query: 1643 SFSRKICNRLGKKAWPTRL*T 1581 S+SRKIC L + +W L*T Sbjct: 3444 SYSRKIC**LTEASWHD*L*T 3506 Score = 42.8 bits (87), Expect(3) = 2e-11 Identities = 31/82 (37%), Positives = 40/82 (48%) Frame = +1 / -2 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 +*H IT *D *+ + +K L* HQ LDLL E + L L QN+N Q Sbjct: 4264 I*HSPSITIYLD*DCT*NSLIALPIKPL*IHQLLDLL*EQNPLQATCVVLFLVQNDNQPQ 4085 Query: 1003 CALF*HERLDWQTSMWLQHCHT 1068 *HE+ D T++ Q HT Sbjct: 4084 YV*S*HEKQD*MTNI*HQDYHT 4019 Score = 40.5 bits (82), Expect(3) = 2e-11 Identities = 28/74 (37%), Positives = 40/74 (54%) Frame = +1 / -2 Query: 1153 VPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC* 1332 +PC L +C* K W VF ++ K + + + LQ L HL LP+L H Q * T * Sbjct: 3934 IPCILIQC*T*KLWPVFLRSKKPNYLLETLQNLL*IFYHLHFLPNLYLNIHLQA*TLTY* 3755 Query: 1333 NLDQYSAYVSHILL 1374 +L+Q V +IL+ Sbjct: 3754 SLNQV*YTVLNILV 3713 Score = 23.1 bits (44), Expect(3) = 2e-11 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +1 / -2 Query: 1411 HVKTNTPCLQQRRYQVL*VSNTE 1479 H KT+ PC +++Y NTE Sbjct: 3676 HAKTDIPCSLEKQYLA*SELNTE 3608
>LOC_Os01g43340:12001.t03850:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5204 Score = 410 bits (889), Expect = e-113 Identities = 168/271 (61%), Positives = 211/271 (77%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 +SQEKYA+DL+K+ + CK TPLS++EKL +GT + D T+YR +VGALQYLTL Sbjct: 4386 MSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTL 4565 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F+VNKVC FLH PTT H+ A KRI+RY+K +GL KS S +VS +S++DW Sbjct: 4566 TRPDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADW 4745 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA++ G NL+SW+A+KQATVSRSS EA YKALANATAE++WVQ++L+E Sbjct: 4746 AGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQE 4925 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L I S WCDN+GA YLS N VFHARTKHIE+D+HFV ERVA KLL + ++ + DQ Sbjct: 4926 LNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQ 5105 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKG 830 VADGFTKAL + E+FK+NLNL K+ + G Sbjct: 5106 VADGFTKALPVKQLENFKYNLNLGKVVIEGG 5198 Score = 260 bits (563), Expect = 2e-68 Identities = 138/248 (55%), Positives = 153/248 (61%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KA VNPSAT*S KS ATLS TK* S SMC VLA T L D+Y AP LSH Sbjct: 5131 KALVNPSAT*SLVDT*STCKSFLATLSLTK**STSMCLVLAWNTGLKDRYFAPILSHHNC 4952 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L I NS + CTH+ SAVA A ALY AS+LDLETVACF A E RL PK A PPV Sbjct: 4951 AIAGLTIFNSCNKVCTHIISAVALAKALYSASVLDLETVACFFAFQETRLSPK*TAKPPV 4772 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+HPAQS E LT +E DL RP C YL I L A + +VVG CKN*HTLF Sbjct: 4771 DLLSSKHPAQSASEYPLTIIEEDLHILRPSPVHCLIYLKILLTAAQCSVVGLCKN*HTLF 4592 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K ISGLV VKY +APT LY V S VP +FS+ D GV LQ F+K Sbjct: 4591 TEKAISGLVRVKYCKAPTMLLY*VASLGPKIVPLPAINFSLADNGVATDLQSLMLTLFSK 4412 Query: 1617 SVAYFS*E 1640 S AYFS*+ Sbjct: 4411 SEAYFS*D 4388 Score = 105 bits (224), Expect(2) = 2e-33 Identities = 69/174 (39%), Positives = 90/174 (51%) Frame = +2 / -1 Query: 1118 LHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IR 1297 LHP++FSC I * LV CL NSGLF P N+I ++ K T * S+I*AS P+ IR Sbjct: 4910 LHPHNFSCSIS*SLVFCLCT*P*NSGLFLCIPGNKIVTQINSKTTS*PSII*ASSPISIR 4731 Query: 1298 KSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 ST+ RR LA T +F+I + C + C M*+LTH VY + +I S + IL Sbjct: 4730 VSTYYHRRRLAYPKTKSSALFNIP*NSFNCCPMFCSGIM*ELTHFVY*ESNIWSSQS*IL 4551 Query: 1478 KSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFLR 1639 S S+ SS+ + * F +R*R F F + IFFLR Sbjct: 4550 *SPNYASILSSIIGS*NSTLTSN*LFTSR*RCSNRFAITHVNSFQ*IRSIFFLR 4389 Score = 58.3 bits (121), Expect(2) = 2e-33 Identities = 34/71 (47%), Positives = 44/71 (61%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 VEI+ E+F+ L *SF KPIS LI + N+Q+F NSLS KM I VL M+ I Sbjct: 5171 VEIVLEIFQLLHR*SFSKPISYLIIG*HIINLQKFPSNSLSDKMIINFYVLSPCMEHRIK 4992 Query: 1037 RQVCGSNIVTP 1069 R + S+I+TP Sbjct: 4991 R*IFCSHIITP 4959 Score = 87.2 bits (184), Expect(2) = 3e-22 Identities = 49/128 (38%), Positives = 71/128 (55%) Frame = -2 / +2 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++F++ T Y KQ V V T +++ +L S K+ T WS QV FY + Sbjct: 4550 TIFNSD*TRYCFLSKQSVSVLT*SHYRTLGSS*KNFKVY*TMHWTWS*DMQVFFYDSKWI 4729 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 * LG M R* N W C +F S F+ C +TSHCF++ +RGR+QG S C+S*+++GA Sbjct: 4730 L*C*LGWMLR**KVNWWFCCLFG*QSCFLECKETSHCFKVKYRGRIQGFS*CYS*NYVGA 4909 Query: 1118 IHAKGVGY 1095 G+ Y Sbjct: 4910 DFVAGIKY 4933 Score = 39.1 bits (79), Expect(2) = 3e-22 Identities = 31/72 (43%), Positives = 37/72 (51%) Frame = -1 / +1 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GV + E + L I M ST + I IL EREL N + IK LMGL KLY+ Sbjct: 4960 GVIIWEQNIYLLILCSMQGLST*KLIIILSERELLGNFCRLIMCQPMIK*LMGLLKLYL* 5139 Query: 888 KVLKTSNIIST* 853 K S+ IST* Sbjct: 5140 SSWKISSTIST* 5175 Score = 55.1 bits (114), Expect(4) = 9e-17 Identities = 36/76 (47%), Positives = 41/76 (53%) Frame = -1 / +1 Query: 1329 ASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH* 1150 AS LL *V L+ G DA*M + Q V L + I F G+ NKPLF RQ TR * Sbjct: 4699 ASLLL***VDTLMLIGLDA*MIEGQLVVLLFIWVTILFPGMQRNKPLFQGQVQRQNTRL* 4878 Query: 1149 QMPQLKSYGCNPC*RS 1102 M QLK GC C R+ Sbjct: 4879 LMLQLKLCGCRLCCRN 4926 Score = 35.9 bits (72), Expect(4) = 9e-17 Identities = 29/83 (34%), Positives = 43/83 (51%) Frame = -1 / +1 Query: 1659 TRMHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VL 1480 +R+ ++ LKKNM +*K L + N YL+ K+ L + * LLN + L Sbjct: 4369 SRVEYLCLKKNMLLIY*KELT*VIANLLLHRYLLVKS*LLVRVLF*DPMMLLNIEA*LGL 4548 Query: 1479 FSI*HLQDLISPLL*TRCVSFYM 1411 ++I* D I *T+CVS Y+ Sbjct: 4549 YNI*L*LDQILLSQ*TKCVSSYI 4617 Score = 26.3 bits (51), Expect(4) = 9e-17 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -2 / +2 Query: 1052 SHILVCQSSLSC*NKAH*DRFSFCVRESC 966 S I + S + C + AH SFC RESC Sbjct: 4976 SKISIF*SCVPCKD*AHRS*LSFCQRESC 5062 Score = 24.4 bits (47), Expect(4) = 9e-17 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 / +2 Query: 926 SSC*WVYKSFTYTKF*RLQT*SQL 855 SS *WVY SFT + Q SQL Sbjct: 5102 SSS*WVY*SFTCEAAGKFQVQSQL 5173 Score = 66.1 bits (138), Expect(2) = 4e-15 Identities = 45/121 (37%), Positives = 58/121 (47%) Frame = +1 / -3 Query: 1096 YPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLG 1275 Y P AP * QL H L PC LP KQWLV + K D Q H L HL Sbjct: 4932 YLIPATKSAPT*FQL*H*LKPCILPLYLTLKQWLVSLHSRKQDCHPNKQQNHQLTFYHLS 4753 Query: 1276 ILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQ 1455 I P+ + H *K TC + DQ V + L + L + L +V+T+T CL +++Y Sbjct: 4752 IQPNQHQSIHLLS*KKTCIS*DQVQCIV*YTLKFF*LLPNVL*WDYVRTDTLCLLRKQYL 4573 Query: 1456 V 1458 V Sbjct: 4572 V 4570 Score = 36.3 bits (73), Expect(2) = 4e-15 Identities = 28/71 (39%), Positives = 35/71 (49%) Frame = +1 / -3 Query: 856 S*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDW 1035 S*D *+ VKL *THQ LD + +V QLSL QN+N CA H D Sbjct: 5172 S*DCT*NFPAASQVKL**THQLLDHWLTHNQPAKVS*QLSL*QNDNQLLCA*SLHGTQD* 4993 Query: 1036 QTSMWLQHCHT 1068 + + L + HT Sbjct: 4992 KIDILLPYYHT 4960
>LOC_Os10g01910:12010.t00087:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4964 Score = 409 bits (888), Expect = e-113 Identities = 172/271 (63%), Positives = 208/271 (76%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA+DL+K+ G+ CKP TP S+ EKLS G+ + D TKYR +VGALQYLTL Sbjct: 3541 LTQEKYASDLLKRAGMIACKPVSTPHSTIEKLSAYNGSELGINDATKYRSIVGALQYLTL 3720 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD+ FAVNKVC FLH PT H A KRI+RYV +N+GL + S S+LVSAFS+ DW Sbjct: 3721 TRPDLPFAVNKVCPFLHCPTVQHTMAVKRILRYVTSIVNLGLRINMSSSSLVSAFSDEDW 3900 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGF ++ G NL+SWSA KQATVSRSS EA YKA+ANATAEV+W+ ++LKE Sbjct: 3901 AGSVDDRRSTGGFVVYLGSNLVSWSATKQATVSRSSTEAEYKAVANATAEVMWI*TLLKE 4080 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 +GI S WCDN+GATYL N VFHARTKHIE+D+HFV ERVA+K L+IRFI DQ Sbjct: 4081 IGIDSPPCARLWCDNMGATYLLVNPVFHARTKHIEVDYHFVRERVASKQLEIRFISLGDQ 4260 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKG 830 DGFTK+L Q F++F+ N+NL KL*LR G Sbjct: 4261 EVDGFTKSLPVQQFQNFRFNINLDKL*LRGG 4353 Score = 188 bits (404), Expect(2) = 6e-58 Identities = 95/180 (52%), Positives = 111/180 (61%) Frame = +3 / -1 Query: 1095 IPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSR 1274 IP SF+ H+TSAVA A+ALY AS+LDLETVACF+A + R PK PPV+ LSS Sbjct: 4088 IPISFNKVYIHITSAVALATALYSASVLDLETVACFVALQDTRFDPK*TTKPPVDLLSST 3909 Query: 1275 HPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEIS 1454 PAQS EKALT E D+L P ++ TYL I A+ VG CKN TL TAK S Sbjct: 3908 DPAQSSSEKALTREEEDMLILNPRLTIDVTYLKILFTAIVCCTVGQCKNGQTLLTAKGKS 3729 Query: 1455 GLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 GLV VKY*RAPT LY V S P +SFS+++ GV GLQ P F +S AYFS Sbjct: 3728 GLVKVKY*RAPTILLYFVASFIPNSEPL*AESFSIVE*GVETGLQAIIPALFNRSEAYFS 3549 Score = 58.3 bits (121), Expect(2) = 6e-58 Identities = 31/54 (57%), Positives = 36/54 (66%) Frame = +3 / -1 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 V PS +*S + IN +S L ATLS TK* S S+C V A* T +KYVAP LSH Sbjct: 4277 VKPSTS*SPKEINLISNCLLATLSLTK**STSICLVRA*NTGFTNKYVAPILSH 4116 Score = 107 bits (229), Expect = 2e-22 Identities = 84/226 (37%), Positives = 109/226 (48%) Frame = +2 / -3 Query: 836 P*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCS 1015 P S L QV I E+ K L F K I LI * +KP++ CNS S KM IYL +L + Sbjct: 4347 PQS*LIQVNIEPEILKLLHRKRFSKAIYLLIP*GDKPDL*LLTCNSFSDKMIIYLYMLST 4168 Query: 1016 SMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSG 1195 SMK I QVC S+I+TP + + R T L L+P+ I + C G+ Sbjct: 4167 SMKHRIY*QVCSSHIITP*SCTWR*INTNFLQQSLYPHYLCRCISNSFIFCFCTGPGDCS 3988 Query: 1196 LFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYY 1375 L S P +I S+ K + +I S P+ I KST+K RR * I HIS Sbjct: 3987 LLCSTPGYQI*SQVNNKASSRPPIINRSSPIFI*KSTYKRRRRHVNS*PKINNRRHIS*N 3808 Query: 1376 TLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 L V W M K T+L+ K I + QILKS+ TSV + Sbjct: 3807 PLYCHRVLHCWTMQKRTNLIDCKR*IWPGQGQILKSSNYTSVLCCI 3670 Score = 54.7 bits (113), Expect(3) = 8e-14 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = -2 / +3 Query: 1502 IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQV 1323 +Q SSVFD + + C + G+ VF +N ++ + KIC+ Y W K V Sbjct: 3681 VQKYSWSSSVFDLDQARFTFCSQ*GLSVFALSNSATHDGSKEDFKICDVYC*SWVKN*HV 3860 Query: 1322 PFYTCECFF*FRLG 1281 F++C+CFF RLG Sbjct: 3861 FFFSCKCFFR*RLG 3902 Score = 46.9 bits (96), Expect(3) = 8e-14 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = -2 / +3 Query: 1052 SHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 S+ILV +S +SC A+ R SFC R+SCK* + VY + S W+Y Sbjct: 4131 SYILVSKSCVSCSY*AYRGRLSFCQRKSCK*AIRDQVYLLRGSRGRWLY 4277 Score = 24.9 bits (48), Expect(3) = 8e-14 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTIS 1542 +RK+C R +K L*T +S + YR+T+S Sbjct: 3546 TRKVCFRSVEKGRNDCL*TCFYSSLYYRETLS 3641 Score = 73.5 bits (154), Expect = 4e-12 Identities = 66/179 (36%), Positives = 87/179 (48%) Frame = -1 / +2 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *DM* + IL * LL L*VLF ++ G D M L + D I + G+L++K Sbjct: 3812 *DM*RLLLILG*ELTCLLLLL*VLFQMKIGLDLLMIGGLLEALLFTWDQIWYPGVLQSKL 3991 Query: 1191 LFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLE 1012 P +Q + M + + G C*R V L + GV + E HTC I FML Sbjct: 3992 QSPGPVQKQNIKLLLMQRQR*CGYRLC*RKLVLIHLHVQDYGVIIWELHTC**ILCFMLV 4171 Query: 1011 QSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*G 835 S R*I IL E+ELQ+++ GL IK M L L++ + S I T S D*G Sbjct: 4172 LSI*R*IIILSEKELQVSN*RSGLSP*GIKR*MALLNLFLCNSFRISGSILTWISYD*G 4348 Score = 44.6 bits (91), Expect(2) = 2e-05 Identities = 32/79 (40%), Positives = 40/79 (50%) Frame = +1 / -2 Query: 832 PSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCAL 1011 P I T S* *+ + ++ *+H LD L *T YLQL L QN+NL A Sbjct: 4351 PPSIITYPS*Y*T*NSETVAQEEI**SHLPLDPLRR*T*SLIAYLQLFL*QNDNLPLYA* 4172 Query: 1012 F*HERLDWQTSMWLQHCHT 1068 + HE D TSM L + HT Sbjct: 4171 YEHETQDLLTSM*LPYYHT 4115 Score = 30.9 bits (61), Expect(2) = 2e-05 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = +1 / -2 Query: 1267 HLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHIL 1371 H I P+L+ KKH Q K TC* L Q SHIL Sbjct: 3916 HQQIQPNLHLKKHLQEKKKTC*FLTQD*Q*TSHIL 3812
>LOC_Os05g49850:12005.t04418:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4263 Score = 406 bits (881), Expect = e-112 Identities = 166/267 (62%), Positives = 210/267 (78%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKY TDL+++ G+ CKP TPLS++EKL+L EG + D + YR +VGALQYLTL Sbjct: 3463 LTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTL 3642 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI F VNKVC FLHAPT VH+ A KRI+RY+K +GL SKS S LVS +S++DW Sbjct: 3643 TRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADW 3822 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG +DDRRSTGGFA+F G NL+SW+A+KQATV RSS E+ YKALANATAE++W+Q++L+E Sbjct: 3823 AGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEE 4002 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L + S WCDN+GA YLS+N VFHARTKHIE+D+HFV ER+ KLL++ FI + DQ Sbjct: 4003 LSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQ 4182 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL* 842 VADGFTKAL + E+FK+NLN+ +L* Sbjct: 4183 VADGFTKALSARQLENFKYNLNVGRL* 4263 Score = 260 bits (562), Expect = 2e-68 Identities = 134/245 (54%), Positives = 157/245 (64%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFVNPSAT*S IN S + LS TK* S S+C VLA*KT L DKY+AP LSH + Sbjct: 4205 AFVNPSAT*SPVGINSTSSNFRCILSRTK**STSICLVLA*KTGLDDKYLAPRLSHHSRA 4026 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 + L +S + C HM SAVA A ALY S+LDL TVACF A E +L P+N A PPV+ Sbjct: 4025 IGGLGTLSSSNRVCIHMISAVALAKALYSDSVLDLGTVACFFAFQETKLSPRNTAKPPVD 3846 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS PAQS E LTS++ DLL F+P CF YL I A +*T+VGAC+N*HTLFT Sbjct: 3845 LLSSIFPAQSASEYPLTSIDFDLLIFKPSLVHCFKYLNILFIAAQ*TIVGACRN*HTLFT 3666 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 K +SGLV VKY APT L L S PS + SFS++DKGV GLQ P ++S Sbjct: 3665 GK*MSGLVRVKYWSAPTTLL*LDASLGPNKSPSCKVSFSLVDKGVLTGLQSVIPTRLSRS 3486 Query: 1620 VAYFS 1634 V YFS Sbjct: 3485 VTYFS 3471 Score = 164 bits (352), Expect = 2e-39 Identities = 88/224 (39%), Positives = 130/224 (58%) Frame = +2 / -1 Query: 842 SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSM 1021 SQ +EI+ ++FK C * CK I +LI NK + + F +S ++KM + LN+L SSM Sbjct: 4263 SQPTYIEIVLKIFKLSCR*RLCKSIGHLITCRNKLHFK*FSLHSFTYKMIVNLNMLSSSM 4084 Query: 1022 KD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLF 1201 KD + + + I+TP++ R ++T+ L* L+P+DF C I LV R +S LF Sbjct: 4083 KDRVR**IFSTKIITPQSSHWRTWHTEFL*QSLYPHDFCCSISQGLVF*FSTRPWHSSLF 3904 Query: 1202 SSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTL 1381 P N+I KYCK +C +S+I SCPV I ST+K R L +*T +F I Y+L Sbjct: 3903 LCIPRNQIIP*KYCKTSCRSSIIYISCPVCI*ISTNKHRL*LTNL*TKFSTLF*IP*YSL 3724 Query: 1382 GSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 S +N M*KLT+L+Y K ++ S + +L+ +Y TSV + Sbjct: 3723 HSSPMNYSRSM*KLTYLIYWKVNVWSSQS*VLECSYYTSVIRCI 3592 Score = 102 bits (218), Expect = 6e-21 Identities = 69/201 (34%), Positives = 101/201 (50%) Frame = -2 / +3 Query: 1505 *IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQ 1326 *+Q R + V ++ T +LL K G+ V TC+ +SSL + K+ +T W K Sbjct: 3600 *LQKCSRSTPVLNSD*TRHLLSSK*GMSVSTCSYYSSLGCYEENIKVFKTMY*TWFKD** 3779 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V Y C F RLGR R* R C+I * F+ C +TS+C ++*+ R+QG Sbjct: 3780 VKVYAC*WIFRCRLGRKYR**KIYRRFCSISRG*FGFLECKETSYCAKV*Y*IRIQGLG* 3959 Query: 1145 CHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 C+S +H+ +G K + +V* W I + LSC*N A+* SFC ++ Sbjct: 3960 CYSRNHVDTNSVRGTQCAKSSNGSTVV**SWC*IFII*PCLSC*N*AY*G*LSFCT*KNA 4139 Query: 965 K*TLGHSVYSFKRSSC*WVYK 903 VYS++ SS W+YK Sbjct: 4140 TKIT*SGVYSYR*SSGRWIYK 4202 Score = 54.2 bits (112), Expect(2) = 8e-14 Identities = 41/97 (42%), Positives = 50/97 (51%) Frame = -1 / +2 Query: 1344 LV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQ 1165 LV* S L L V +QTGQ+ *M + Q LQYF +I F G+ NK L L Q Sbjct: 3761 LV*RLVSQSLCLLVDIQMQTGQEI*MIEDLQEVLQYF*GIIWFLGMQRNKLLCQGLVLNQ 3940 Query: 1164 GTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTML 1054 TR M Q KS G C*R+ V + L+ GV +L Sbjct: 3941 NTRPWLMLQQKSCGYKLC*RNSVCQVLQWLDCGVIIL 4051 Score = 43.7 bits (89), Expect(2) = 8e-14 Identities = 27/61 (44%), Positives = 32/61 (52%) Frame = -1 / +2 Query: 1026 SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST**S 847 SFMLE S LR IL +E N + LF+Q IK M LQ+ Y LK + IS * Sbjct: 4079 SFMLELSILRLTIILYVKECNENYLKWSLFLQVIKWPMDLQRRYRQDNLKILSTISM*VG 4258 Query: 846 C 844 C Sbjct: 4259 C 4261 Score = 67.5 bits (141), Expect = 3e-10 Identities = 66/202 (32%), Positives = 94/202 (46%) Frame = +1 / -3 Query: 844 TTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HE 1023 TT *D *+ Q + + L* H+ LD L E*T +++ QN++ Q A F*HE Sbjct: 4261 TTYLH*DCT*NFQVVLPITPL*IHRPLDHL*E*TPLQVIFVAFFHVQNDSQPQYA*F*HE 4082 Query: 1024 RLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF 1203 R ++ Q HT + PL * L H PC L + * Q LV Sbjct: 4081 RQG*MINI*HQDYHTTVEPLEDLAH*VPLTEFVST*FLL*H*PRPCILIQY*TLAQ*LVS 3902 Query: 1204 *QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAW 1383 + K + +ILQ L HL LPSL+ H Q * T *+L+Q V + L+++ Sbjct: 3901 LHSKKPNYPLEILQNLL*IFYHLYFLPSLHLNIH*QA*TLTY*SLNQV*YIVLNTLIFSS 3722 Query: 1384 QL*SELWLVHVKTNTPCLQQRR 1449 +EL HV+T+ P L + + Sbjct: 3721 *QPNEL**EHVETDIPYLLESK 3656
>LOC_Os03g30860:12003.t02692:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4314 Score = 405 bits (879), Expect = e-112 Identities = 167/271 (61%), Positives = 210/271 (77%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 +SQEKYA+DL+K+ + CK TPLS++EKL +GT + D T+YR +VGALQYLTL Sbjct: 3496 MSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTL 3675 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TR DI+F+VNKVC FLH PTT H+ A KRI+RY+K +GL KS S +VS +S++DW Sbjct: 3676 TRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADW 3855 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AGCLDDRRSTGGFA++ G NL+SW+A+KQATVSRSS EA YKALANATAE++WVQ++L+E Sbjct: 3856 AGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQE 4035 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L I S WCDN+GA YLS N VFHARTKHIE+D+HFV ERVA KLL + ++ + DQ Sbjct: 4036 LNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQ 4215 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKG 830 VADGFTKAL + E+FK+NLNL K+ + G Sbjct: 4216 VADGFTKALPVKQLENFKYNLNLGKVVIEGG 4308 Score = 258 bits (557), Expect = 1e-67 Identities = 137/248 (55%), Positives = 152/248 (61%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KA VNPSAT*S KS ATLS TK* S SMC VLA T L D+Y AP LSH Sbjct: 4241 KALVNPSAT*SLVDT*STCKSFLATLSLTK**STSMCLVLAWNTGLKDRYFAPILSHHNC 4062 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 + L I NS + CTH+ SAVA A ALY AS+LDLETVACF A E RL PK A PPV Sbjct: 4061 AIAGLTIFNSCNKVCTHIISAVALAKALYSASVLDLETVACFFAFQETRLSPK*TAKPPV 3882 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSS+HPAQS E LT +E DL RP C YL I L A + +VVG CKN*HTLF Sbjct: 3881 DLLSSKHPAQSASEYPLTIIEEDLHILRPSPVHCLIYLKILLTAAQCSVVGLCKN*HTLF 3702 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T K IS LV VKY +APT LY V S VP +FS+ D GV LQ F+K Sbjct: 3701 TEKAISSLVRVKYCKAPTMLLY*VASLGPKIVPLPAINFSLADNGVATDLQSLMLTLFSK 3522 Query: 1617 SVAYFS*E 1640 S AYFS*+ Sbjct: 3521 SEAYFS*D 3498 Score = 105 bits (223), Expect(2) = 2e-33 Identities = 69/174 (39%), Positives = 90/174 (51%) Frame = +2 / -1 Query: 1118 LHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IR 1297 LHP++FSC I * LV CL NSGLF P N+I ++ K T * S+I*AS P+ IR Sbjct: 4020 LHPHNFSCSIS*SLVFCLCT*P*NSGLFLCIPGNKIVTQINSKTTS*PSII*ASSPISIR 3841 Query: 1298 KSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 ST+ RR LA T +F+I + C + C M*+LTH VY + +I S + IL Sbjct: 3840 VSTYYHRRRLAYPKTKSSALFNIP*NSFNCCPMFCSGIM*ELTHFVY*ESNI*SSQS*IL 3661 Query: 1478 KSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFLR 1639 S S+ SS+ + * F +R*R F F + IFFLR Sbjct: 3660 *SPNYASILSSIIGS*NSTLTSN*LFTSR*RCSNRFAITHVNSFQ*IRSIFFLR 3499 Score = 58.8 bits (122), Expect(2) = 2e-33 Identities = 35/71 (49%), Positives = 44/71 (61%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 VEI+ E+F+ L *SF KPIS LI + N+Q+F NSLS KM I VL M+ I Sbjct: 4281 VEIVLEIFQLLHR*SFSKPISYLIIG*HIINLQKFPSNSLSDKMIINFYVLSPCMEHRIK 4102 Query: 1037 RQVCGSNIVTP 1069 R + S+IVTP Sbjct: 4101 R*IFCSHIVTP 4069 Score = 87.2 bits (184), Expect(2) = 5e-23 Identities = 49/128 (38%), Positives = 71/128 (55%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++F++ T Y KQ V V T +++ +L S K+ T WS QV FY + Sbjct: 3660 TIFNSD*TRYCFLSKQSVSVLT*SHYRTLGSS*KNFKVY*TMHWTWS*DMQVFFYDSKWI 3839 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 * LG M R* N W C +F S F+ C +TSHCF++ +RGR+QG S C+S*+++GA Sbjct: 3840 L*C*LGWMLR**KVNWWFCCLFG*QSCFLECKETSHCFKVKYRGRIQGFS*CYS*NYVGA 4019 Query: 1118 IHAKGVGY 1095 G+ Y Sbjct: 4020 DFVAGIKY 4043 Score = 41.8 bits (85), Expect(2) = 5e-23 Identities = 32/72 (44%), Positives = 38/72 (52%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVH 889 GVT+ E + L I M ST + I IL EREL N + IK LMGL KLY+ Sbjct: 4070 GVTIWEQNIYLLILCSMQGLST*KLIIILSERELLGNFCRLIMCQPMIK*LMGLLKLYL* 4249 Query: 888 KVLKTSNIIST* 853 K S+ IST* Sbjct: 4250 SSWKISSTIST* 4285 Score = 55.1 bits (114), Expect(4) = 2e-17 Identities = 36/76 (47%), Positives = 41/76 (53%) Frame = -1 / +2 Query: 1329 ASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH* 1150 AS LL *V L+ G DA*M + Q V L + I F G+ NKPLF RQ TR * Sbjct: 3809 ASLLL***VDTLMLIGLDA*MIEGQLVVLLFIWVTILFPGMQRNKPLFQGQVQRQNTRL* 3988 Query: 1149 QMPQLKSYGCNPC*RS 1102 M QLK GC C R+ Sbjct: 3989 LMLQLKLCGCRLCCRN 4036 Score = 35.0 bits (70), Expect(4) = 2e-17 Identities = 29/83 (34%), Positives = 43/83 (51%) Frame = -1 / +2 Query: 1659 TRMHFIFLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VL 1480 +R+ ++ LKKNM +*K L + N YL+ K+ L + * LLN + L Sbjct: 3479 SRVEYLCLKKNMLLIY*KELT*VIANLLLHRYLLVKS*LLVRVLF*DPMMLLNIEA*LGL 3658 Query: 1479 FSI*HLQDLISPLL*TRCVSFYM 1411 ++I* D I *T+CVS Y+ Sbjct: 3659 YNI*L*LD*ILLSQ*TKCVSSYI 3727 Score = 29.9 bits (59), Expect(4) = 2e-17 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 +V*Q S I + S + C + AH SFC RESC Sbjct: 4068 MV*QYGSKISIF*SCVPCKD*AHRS*LSFCQRESC 4172 Score = 24.4 bits (47), Expect(4) = 2e-17 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 / +3 Query: 926 SSC*WVYKSFTYTKF*RLQT*SQL 855 SS *WVY SFT + Q SQL Sbjct: 4212 SSS*WVY*SFTCEAAGKFQVQSQL 4283 Score = 66.1 bits (138), Expect(2) = 1e-16 Identities = 45/121 (37%), Positives = 58/121 (47%) Frame = +1 / -3 Query: 1096 YPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLG 1275 Y P AP * QL H L PC LP KQWLV + K D Q H L HL Sbjct: 4042 YLIPATKSAPT*FQL*H*LKPCILPLYLTLKQWLVSLHSRKQDCHPNKQQNHQLTFYHLS 3863 Query: 1276 ILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQ 1455 I P+ + H *K TC + DQ V + L + L + L +V+T+T CL +++Y Sbjct: 3862 IQPNQHQSIHLLS*KKTCIS*DQVQCIV*YTLKFF*LLPNVL*WDYVRTDTLCLLRKQYL 3683 Query: 1456 V 1458 V Sbjct: 3682 V 3680 Score = 41.4 bits (84), Expect(2) = 1e-16 Identities = 29/71 (40%), Positives = 36/71 (50%) Frame = +1 / -3 Query: 856 S*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDW 1035 S*D *+ VKL *THQ LD + +V QLSL QN+N CA H D Sbjct: 4282 S*DCT*NFPAASQVKL**THQLLDHWLTHNQPAKVS*QLSL*QNDNQLLCA*SLHGTQD* 4103 Query: 1036 QTSMWLQHCHT 1068 + + L +CHT Sbjct: 4102 KIDILLPYCHT 4070
>LOC_Os12g33320:12012.t03023:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 8849 Score = 231 bits (498), Expect(3) = e-109 Identities = 95/135 (70%), Positives = 110/135 (81%) Frame = -3 / +1 Query: 1240 IFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCD 1061 +F G NL+SWSARKQATVSRSS EA YKA+ANATAEV+W+Q++LKE+GI + T C WCD Sbjct: 3124 VFLGSNLVSWSARKQATVSRSSTEAEYKAVANATAEVMWIQTLLKEIGINAPMTACLWCD 3303 Query: 1060 NVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 N+GATYLS N VFHARTKHIE+D+HFV ERVA K L I+FI S DQVADGF K L Q Sbjct: 3304 NLGATYLSVNHVFHARTKHIEVDYHFVRERVARKQLVIKFISSGDQVADGFAKPLSVQQL 3483 Query: 880 EDFKHNLNLIKL*LR 836 +F+HNLNL KL*LR Sbjct: 3484 RNFRHNLNLDKL*LR 3528 Score = 171 bits (367), Expect(3) = e-109 Identities = 69/115 (60%), Positives = 88/115 (76%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L QEKYATDL+KK G+ CKP TP+S++EKLS GT + D TKYR +VGA QYLTL Sbjct: 2729 LKQEKYATDLLKKAGMLNCKPVNTPISTSEKLSAHSGTVLGESDATKYRSIVGAFQYLTL 2908 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 TRPDISF+VNK+C FLH+PT H+ A KRI+RY+K ++++GL ++S S LVS F Sbjct: 2909 TRPDISFSVNKICQFLHSPTVEHWMAVKRILRYIKFSVDLGLKINRSSSMLVSYF 3073 Score = 35.9 bits (72), Expect(3) = e-109 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = -3 / +1 Query: 1300 FSNSDWAGCLDDRRSTGG 1247 F +DWAG +DDRRSTGG Sbjct: 3070 FLIADWAGSVDDRRSTGG 3123 Score = 138 bits (295), Expect(3) = 9e-62 Identities = 67/109 (61%), Positives = 78/109 (71%) Frame = +3 / -1 Query: 912 PSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLEL 1091 PSAT*S E IN ++ ATLS TK* S S+C VLA*KT L DKYVAP LSH + V+ Sbjct: 3452 PSAT*SPEDINLITSCFLATLSLTK**STSICLVLA*KT*LTDKYVAPRLSHHRHAVIGA 3273 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKN 1238 IP S S C H+TSAVA A+ALY AS+LDLETVACFLA + +L P+N Sbjct: 3272 LIPISLSKVCIHITSAVALATALYSASVLDLETVACFLALQDTKLDPRN 3126 Score = 112 bits (240), Expect(3) = 9e-62 Identities = 57/112 (50%), Positives = 71/112 (63%) Frame = +3 / -3 Query: 1299 KALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY* 1478 K LT+++ D F+P + F YL I A++ + VG CKN* LFT KEISGLV+V+Y Sbjct: 3072 K*LTNIDEDRFIFKPRSTENFIYLNILFTAIQCSTVGLCKN*QILFTEKEISGLVNVRYW 2893 Query: 1479 RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 +APT LYLV S VP D+FS ++ GV GLQ P FF KSVAYFS Sbjct: 2892 KAPTILLYLVASLSPRTVPL*ADNFSEVEIGVLTGLQFNIPAFFNKSVAYFS 2737 Score = 26.7 bits (52), Expect(3) = 9e-62 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +3 / -1 Query: 1248 PPVERLSSRHPAQSELEKAL 1307 PPV+ LSS PAQS ++ L Sbjct: 3122 PPVDLLSSTDPAQSAIKNNL 3063 Score = 60.2 bits (125), Expect(2) = 4e-16 Identities = 47/141 (33%), Positives = 69/141 (48%) Frame = +2 / -3 Query: 818 SLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIY 997 +L P S L V+I+ ++ K L + IS+LI * K + Q F NS S KM I+ Sbjct: 3546 TLLTLPPQS*LI*VKIVPKISKLLN*KRLSETISHLIS*RYKLDYQLFSSNSFSDKMIIH 3367 Query: 998 LNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDA 1177 + MK+ I Q+ + I+TP T R L L+P++F I CL+ C Sbjct: 3366 FYMFSPGMKNMIN*QIRCTKIITP*TCCHRCINPNFLK*SLYPHNFCSCISNCLIFCFCT 3187 Query: 1178 RSGNSGLFSSRP*NEIRSKKY 1240 S + LF S P + I S+K+ Sbjct: 3186 *SRDCCLFPSTPRH*IGSQKH 3124 Score = 45.5 bits (93), Expect(2) = 4e-16 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = +2 / -2 Query: 1358 FHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 F+IS Y L + W M KLT ++ K +I S +C+IL+S+ TS+FS + Sbjct: 3013 FYISQYPLYCHPMFNSWTMQKLTDFIH*KRNIGSSQCEILESSNYTSIFSCI 2858 Score = 52.4 bits (108), Expect = 9e-06 Identities = 25/57 (43%), Positives = 34/57 (59%) Frame = -2 / +3 Query: 1082 DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*W 912 DS+ +V* W ++ V S SC + + SFC R+SC T G+ VY F+RSS *W Sbjct: 3282 DSMSMV**SWCNVFVS*SCFSCQD*TYRSGLSFCQRKSC*KTTGNQVYIFRRSSG*W 3452 Score = 42.3 bits (86), Expect = 0.010 Identities = 30/80 (37%), Positives = 40/80 (50%) Frame = -1 / +2 Query: 1074 VSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 V GV +L C I FM + + I IL E+EL N+W L++Q+IK LM + Sbjct: 3290 VYGVIILVQRICQLIMFFMPGLNI*KWIIILSEKELLENNW*SSLYLQEIKWLMVSLSRF 3469 Query: 894 VHKVLKTSNIIST**SCD*G 835 L+ I T* S D*G Sbjct: 3470 QFSSLEILGTILT*ISYD*G 3529
>LOC_Os09g08540:12009.t00648:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5604 Score = 396 bits (860), Expect = e-109 Identities = 165/269 (61%), Positives = 208/269 (77%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + LSQEKYAT +++K G+ CKP TPLS++EKLS+ EG+ + D T++R +VGALQ Sbjct: 3127 NGILLSQEKYATYVIRKVGMNDCKPVTTPLSTSEKLSVNEGSLLGPNDATQHRSVVGALQ 3306 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF VNKVC FLH+PTT H+ K I+RY+KHT+ +GL KS S LVS FS Sbjct: 3307 YLTLTRPDISFPVNKVCQFLHSPTTEHWATVKMILRYLKHTVKLGLKICKSSSLLVSGFS 3486 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 +DWAG LDDR ST GFA+F NL+SWSARKQATVSRSS EA YKALAN TA+++W+ + Sbjct: 3487 YADWAGSLDDRWST*GFAVFL*SNLVSWSARKQATVSRSSTEAEYKALANTTADIMWI*T 3666 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +LKE I++ CDN+GA Y+S+NLV H TKHIE+D+HFV ERVA KLL+I +I Sbjct: 3667 LLKESEIQAPAAAKILCDNIGAKYMSSNLVVHVSTKHIEVDYHFVRERVARKLLEIEYIS 3846 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIK 848 +KDQ+ADGFTKAL + FE FK+NLNL++ Sbjct: 3847 TKDQIADGFTKALAVRPFEMFKNNLNLVR 3933 Score = 243 bits (524), Expect = 4e-63 Identities = 129/247 (52%), Positives = 150/247 (60%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 +A V PSA *S + +S S ATLS TK* S S+CFVL * TR D Y AP LSH+ Sbjct: 3884 RALVKPSAI*SLVEMYSISSSFLATLSLTK**STSICFVLT*TTRFDDIYFAPILSHKIL 3705 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 I +SF+ HM SAV A ALY AS+L+ +TVACFLA + RL KN ANP V Sbjct: 3704 AAAGACISDSFNKVYIHMISAVVLAKALYSASVLERDTVACFLALQDTRLDHKNTANPHV 3525 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSR PAQS EK LT + DL F P +VC YL I + +VVG C+N*HTLF Sbjct: 3524 DHLSSRLPAQSAYEKPLTRRDEDLHIFSPNLTVCLRYLRIIFTVAQCSVVGECRN*HTLF 3345 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTK 1616 T KEISGLVSVKY +APT L V S +PS D+FS +D GV GLQ P Sbjct: 3344 TGKEISGLVSVKYCKAPTTLLCCVASFGPNRLPSFTDNFSEVDNGVVTGLQSFIPTLRIT 3165 Query: 1617 SVAYFS* 1637 VAYFS* Sbjct: 3164 YVAYFS* 3144 Score = 133 bits (284), Expect = 5e-30 Identities = 73/183 (39%), Positives = 99/183 (54%) Frame = +2 / -1 Query: 965 CNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCG 1144 C S+KM I +LC+ M *I + SNI+ G R Y L * L+P+D SC Sbjct: 3816 CYPFSNKMIINFYMLCAYMNH*I**HILCSNIIAQNLGCCRGLYL*LF*QSLYPHDISCC 3637 Query: 1145 IC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRG 1324 I * LV R+ + LF S P +++ S+KYCK +C VI* + P+ I K+THK R Sbjct: 3636 IS*GLVFSFCTRTRHGCLFPSTPGHKVGSQKYCKSSCRPPVI*TASPICI*KTTHKKR*R 3457 Query: 1325 LAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVF 1504 A *+ MF IS S + C W M KLTHL++ + +IRSC+C IL S TS+ Sbjct: 3456 FAYF*SQFNSMFKISQNHFYSSPMFCCWRMQKLTHLIHWERNIRSCQC*IL*SPNNTSML 3277 Query: 1505 SSV 1513 + Sbjct: 3276 CGI 3268 Score = 71.6 bits (150), Expect(2) = 2e-16 Identities = 46/126 (36%), Positives = 66/126 (52%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 +VF+T KT*Y + GV V +N+ +L C+ S+I TY +K Q+ +CE F Sbjct: 3303 TVFNTDKT*YFFPSE*GVSVSAFSNNRTLGYCKNDSEIS*TYC*IGTKNMQIFISSCEWF 3482 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGA 1119 F RLG R*Q +C+IF + C*+TS+ *+R +QG S +S* H+ Sbjct: 3483 FICRLGWQSR*QVVYMRICSIFVIQPCVLEC*ETSNRVSF*YRS*IQGLS*YNS*YHVDI 3662 Query: 1118 IHAKGV 1101 K V Sbjct: 3663 DFVKRV 3680 Score = 35.0 bits (70), Expect(2) = 2e-16 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = -2 / +3 Query: 1055 WSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 WS + V +SS SC +KA+ SFC R+ K V+ RS+ *W ++ Sbjct: 3726 WSKVYVIKSSGSCKHKAYRS*LSFC*RKGSKEATRD*VHLN*RSNS*WFHQ 3878 Score = 58.8 bits (122), Expect(2) = 8e-14 Identities = 46/115 (40%), Positives = 56/115 (48%) Frame = -1 / +2 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L*V+F +Q G *MT LQYF D G+L NK L + TR * + Q Sbjct: 3464 LFL*VVFHMQIGLAV*MTGGLHEDLQYFCDPTLCPGVLGNKQPCLVLVQKLNTRP*LIQQ 3643 Query: 1137 LKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 L S G C*+S K L+ P +LE C I* FM QS + I IL E+ Sbjct: 3644 LISCGYRLC*KSQRYKPLQQPRFCAIILEQSICHQI*WFM*AQSI*KLIIILLEK 3808 Score = 39.1 bits (79), Expect(2) = 8e-14 Identities = 29/64 (45%), Positives = 34/64 (53%) Frame = -1 / +2 Query: 1590 VVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYM 1411 +VN L YL KN +E * Q N +V L+SI*H QDLI * RCVSF + Sbjct: 3191 IVNQLLLHYLPLKNCQ*MREVY*DQMMPHNIEVLLGLYSI*H*QDLIFLSQ*IRCVSFCI 3370 Query: 1410 HQPQ 1399 Q Q Sbjct: 3371 LQQQ 3382 Score = 31.3 bits (62), Expect(2) = 0.081 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 / -3 Query: 1228 VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 + KILQ + CHL P+L+ K HSQ Sbjct: 3553 ITKILQILM*TTCHLDCQPNLHMKNHSQ 3470 Score = 25.4 bits (49), Expect(2) = 0.081 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +1 / -3 Query: 1399 LWLVHVKTNTPCLQQRRYQVL*VSNT 1476 L L + +T+TP ++YQVL V NT Sbjct: 3382 LLLENAETDTPYSLGKKYQVLSVLNT 3305
>LOC_Os07g05340:12007.t00417:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 925 Score = 394 bits (855), Expect = e-109 Identities = 164/273 (60%), Positives = 212/273 (77%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKY TDL+++ G+ CKP TPLS++EKL+L EG + D + Y +VGALQYL+L Sbjct: 28 LTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYISVVGALQYLSL 207 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISF VNKVC FL+APTTVH+ A KRI+RY+K +GL SKS S LVS +S++D Sbjct: 208 TRPDISFPVNKVCQFLYAPTTVHWAAVKRILRYLKQCTKLGLKISKSKSMLVSGYSDAD* 387 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 G +DDRRSTGGFA+F G NL+SW+A+KQAT+SRSS ++ YKALANATAE+IW+Q++L+E Sbjct: 388 VGNIDDRRSTGGFAVFLGDNLVSWNAKKQATMSRSSTKSEYKALANATAEIIWIQTLLEE 567 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 L + S W DN+GA YLS+N VFHARTKHIE+D+HFV ERV KLL++ F + DQ Sbjct: 568 LSVPSPPMARLWYDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVQRKLLEVEFAPTGDQ 747 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 VADGFTKAL + E+FK+NL+L +L*LR ++ Sbjct: 748 VADGFTKALSVRQLENFKYNLDLGRL*LRGSIR 846 Score = 245 bits (530), Expect = 6e-64 Identities = 128/245 (52%), Positives = 153/245 (62%) Frame = +3 / -3 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 AFVNPSAT*S N S + TLS TK* S SMC VLA KT L DKY+AP LS+ + Sbjct: 770 AFVNPSAT*SPVGANSTSSNFRCTLSRTK**STSMCLVLAWKTGLDDKYLAPRLSYHSRA 591 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 + L +S + C HM SAVA A ALY +LDL+ VACF A E +L P+N A PPV+ Sbjct: 590 IGGLGTLSSSNRVCIHMISAVALAKALYSDLVLDLDIVACFFAFQETKLSPRNTAKPPVD 411 Query: 1260 RLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFT 1439 LSS P S E LTS++ DLL F+P CF YL I A +*TVVGA +N*HTLFT Sbjct: 410 LLSSIFPT*SASEYPLTSIDFDLLIFKPSLVHCFKYLNILFTAAQ*TVVGAYRN*HTLFT 231 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKS 1619 KE+SGLV +KY APT + L S PS + SFS++DKGV GLQ P ++S Sbjct: 230 GKEMSGLVRLKYWSAPTTLM*LDASLGPNKSPSCKVSFSLVDKGVLTGLQSVIPTRLSRS 51 Query: 1620 VAYFS 1634 V YFS Sbjct: 50 VTYFS 36 Score = 155 bits (333), Expect = 8e-37 Identities = 88/229 (38%), Positives = 131/229 (57%) Frame = +2 / -2 Query: 827 NTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNV 1006 NT P SQ +EI+ ++FK * CK IS+LI +K + + F +S ++KM + LNV Sbjct: 843 NTPPQSQPT*IEIVLKIFKLSYR*RLCKSISHLITCRSKLHFK*FSLHSFTYKMIVNLNV 664 Query: 1007 LCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSG 1186 L SSM+D + + + I+ P++ R ++T+ L* L+PYDF C I LV R Sbjct: 663 LSSSMEDRVR**IFSTKIIIPQSSHWRTWHTEFL*QSLYPYDFCCSISQGLVF*FSTRP* 484 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 +S LF P N+I KYCK +C +S+I S V I ST+K R L +*T +F I Sbjct: 483 HSSLFLCIPGNQIIP*KYCKTSCRSSIIYISYLVCI*ISTNKHRL*LTNL*TKFSTLF*I 304 Query: 1367 SYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 Y+L S +NC +*KLT+L+Y KG++ S + +L+ +Y T V + Sbjct: 303 P*YSLHSSPMNCSRSI*KLTYLIYWKGNVWSSQT*VLECSYYTYVIRCI 157 Score = 68.4 bits (143), Expect(2) = 5e-20 Identities = 73/194 (37%), Positives = 90/194 (46%) Frame = -1 / +2 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 +KNM +* L +VN L + +N L KE *+ L T V * S * D Sbjct: 35 RKNMLLIY*DELV*LIVNLLVHLCQLVRNSLCMKEIY*VPMMHLIT*V**EHSST*V*LD 214 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQD 1276 P * R VSFYM QF L * +*N LV* S L L V +QT + Sbjct: 215 QTFPFQ*IRYVSFYMLLLQFIGLL*REY*GI*NSVLNLV*RLVSQSLCLLVDIQMQTR*E 394 Query: 1275 A*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV 1096 *M + Q LQYF +I F G+ NK L L Q TR M Q KSYG C*R+ V Sbjct: 395 I*MIEDLQEVLQYF*GIIWFPGMQRNKLLCQGLVLNQNTRPWLMLQQKSYGYKLC*RNSV 574 Query: 1095 *KALRLPVSGVTML 1054 + L+ G+ +L Sbjct: 575 CQVLQWLDCGMIIL 616 Score = 50.6 bits (104), Expect(2) = 5e-20 Identities = 32/68 (47%), Positives = 38/68 (55%) Frame = -1 / +2 Query: 1026 SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYVHKVLKTSNIIST**S 847 S MLE STLR IL +E N + L +Q IK LM LQ+ Y LK + IS * Sbjct: 644 SSMLELSTLRLTIILYVKECNENYLKWSLLLQVIKWLMDLQRRYR*DNLKILSTISI*VG 823 Query: 846 CD*GRVLN 823 CD*G VL+ Sbjct: 824 CD*GGVLD 847 Score = 97.3 bits (206), Expect = 3e-19 Identities = 68/201 (33%), Positives = 96/201 (47%) Frame = -2 / +3 Query: 1505 *IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQ 1326 *+ R + V + T + L K G+ V C+ +SSL C+ K+ +T W K Sbjct: 165 *LHKCSRSTPVLKSD*TRHFLSSK*GMSVSICSYYSSLGCCEENIKVFKTVY*TWFKD** 344 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V Y C F RLGR R* R C+I * F+ C +TS+ ++*+ R+QG Sbjct: 345 VKVYAC*WIFRCRLGRKYR**KIYRRFCSISRG*FGFLECKETSYYVKV*Y*IRIQGLG* 524 Query: 1145 CHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 C+S +HM +G K + +V* W I + L C*N AH* SFC +S Sbjct: 525 CYSRNHMDTNSVRGTQCAKSSNGSTVV**SWC*IFII*PCLPC*N*AH*G*LSFCT*KSA 704 Query: 965 K*TLGHSVYSFKRSSC*WVYK 903 V S++ SS *W+YK Sbjct: 705 TKIT*SGVCSYR*SSG*WIYK 767 Score = 48.3 bits (99), Expect(2) = 1e-10 Identities = 38/115 (33%), Positives = 51/115 (44%) Frame = +1 / -1 Query: 823 V*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQ 1002 +*+ ITT D *+ Q + + L* HQ LD L E T +++ L QN++ Q Sbjct: 847 I*YSPSITTYLDRDCT*NFQVVLPITPL*IHQPLDHL*EQTPLQVIFVALFHVQNDSQPQ 668 Query: 1003 CALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTL 1167 CA F*H R ++ Q HT + PL I* L H PC L Sbjct: 667 CA*F*HGRQG*MINI*HQDYHTTVEPLEDLAH*VPLTEFVSI*FLL*H*PRPCIL 503 Score = 39.1 bits (79), Expect(2) = 1e-10 Identities = 27/72 (37%), Positives = 41/72 (56%) Frame = +1 / -1 Query: 1234 KILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVH 1413 +ILQ L HL LPSL+ H Q * T *+L+Q V + L+++ Q +EL H Sbjct: 436 EILQNLL*IFYHLYFLPSLHLNIH*QA*TLTY*SLNQV*YTVLNTLIFSSQQPNEL**EH 257 Query: 1414 VKTNTPCLQQRR 1449 ++T+ P L +R+ Sbjct: 256 IETDIPYLLERK 221
>LOC_Os04g49790:12004.t04493:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 5494 Score = 307 bits (665), Expect(2) = e-106 Identities = 124/196 (63%), Positives = 156/196 (79%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA DL+K+ + CKP TPLS +EKL+L EG+P+ D T+YR +VGALQ Sbjct: 730 NGIILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQ 909 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+++VNKVC FLHAPTT H+T KRI+RY+ ++GLN KS STLV +S Sbjct: 910 YLTLTRPDIAYSVNKVCQFLHAPTTRHWTGVKRILRYLNQCTSLGLNIHKSASTLVHGYS 1089 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 N+DWAG +DDR+STGGFAIF G NL+SWSARKQ+TVSRSS EA YKA+AN TAE++WVQ+ Sbjct: 1090 NADWAGSIDDRKSTGGFAIFVGSNLVSWSARKQSTVSRSSTEAEYKAVANTTAELMWVQT 1269 Query: 1114 MLKELGIKSSKTPCFW 1067 +L+ELGI+S K W Sbjct: 1270 LLRELGIESPKAVKIW 1317 Score = 101 bits (215), Expect(2) = e-106 Identities = 42/60 (70%), Positives = 51/60 (85%) Frame = -3 / +2 Query: 1063 DNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQS 884 DN+GA YLSAN VFHARTKHIE+D+HFV ERV++KLL+I F+ S DQVA+GFTK+L S Sbjct: 1319 DNLGAKYLSANPVFHARTKHIEVDYHFVRERVSHKLLEIDFVPSGDQVANGFTKSLSVPS 1498 Score = 182 bits (393), Expect(2) = 6e-59 Identities = 100/191 (52%), Positives = 118/191 (61%) Frame = +3 / -3 Query: 1065 HQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIA 1244 HQ L IPNS + CTH+ SAV FA+ALY AS+LDL+TV CFLA + RL P NIA Sbjct: 1319 HQILTALGDSIPNSLNKVCTHINSAVVFATALYSASVLDLDTVDCFLALQDTRLDPTNIA 1140 Query: 1245 NPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN* 1424 NPPV+ LSS PAQS LE T V+ L P F YL I V+* VVGA +N* Sbjct: 1139 NPPVDFLSSILPAQSALEYP*TRVDALLCILSPRLVH*FKYLRILFTPVQ*RVVGA*RN* 960 Query: 1425 HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPG 1604 TLFT +SGLV VKY +APT LY V S G PS + +FS+ ++GV GLQ Sbjct: 959 QTLFTE*AMSGLVKVKYCKAPTILLYCVASLGPKGDPSYKVNFSLTERGVLTGLQFDILT 780 Query: 1605 FFTKSVAYFS* 1637 F KS+AYFS* Sbjct: 779 LFNKSLAYFS* 747 Score = 66.6 bits (139), Expect(2) = 6e-59 Identities = 36/54 (66%), Positives = 39/54 (72%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 FVNP AT*S E +SKSL T S TK* S S+CFVLA* T LADKY+AP LS Sbjct: 1479 FVNPLAT*SPEGTKSISKSLCDTRSLTK**STSICFVLA*NTGLADKYLAPKLS 1318 Score = 105 bits (224), Expect(2) = 7e-31 Identities = 59/151 (39%), Positives = 83/151 (54%) Frame = +2 / -2 Query: 1061 VTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKY 1240 ++P S R +Q * GL+P+ SC I L+ CL AR +SGLF S P ++IR KY Sbjct: 1323 LSPNLDSFRRLNSQFS*QGLYPH*LSCSIRHSLIFCLSARP*HSGLFPSTPGHKIRPHKY 1144 Query: 1241 CKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*K 1420 K +C* SVI +CPV IR S +K RR L I + + +S + SC + M K Sbjct: 1143 SKSSC*FSVIYTTCPVCIRISMNKSRRTLMYIKS*TCALIQVSENSFYSCPMTGSRSMKK 964 Query: 1421 LTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 LT+ +Y +RS + Q+L ST TS+ + Sbjct: 963 LTNFIY*ISYVRSSQGQVL*STNYTSILCCI 871 Score = 50.1 bits (103), Expect(2) = 7e-31 Identities = 26/54 (48%), Positives = 35/54 (64%) Frame = +2 / -1 Query: 905 CKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVT 1066 CKPISNLI * NK N+ + + +S S+KM I L +LC MK I + GS ++T Sbjct: 1477 CKPISNLIS*RNKINL*KLM*HSFSYKMIINLYMLCPCMKHRIS**IFGS*VIT 1316 Score = 62.0 bits (129), Expect(2) = 3e-17 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = -2 / +3 Query: 1316 YTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS 1137 Y+C F* RLGR R*Q NR +C I *S + C*+T HC ++ H GR+ G + +S Sbjct: 1068 YSCSWIF*CRLGR*YR*QKINRRICYICGV*SCVLEC*ETIHCVKVEH*GRI*GCGEYYS 1247 Query: 1136 *SHMGAIHAKGVG 1098 * ++G K +G Sbjct: 1248 *VNVGTNLVKRIG 1286 Score = 47.8 bits (98), Expect(2) = 3e-17 Identities = 24/50 (48%), Positives = 29/50 (58%) Frame = -2 / +1 Query: 1052 SHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYK 903 S I + S +SC +KA+ SFC R S * SF+RSSC*WVYK Sbjct: 1330 SQIFIS*SCVSCKDKAYRG*LSFCKRTSVT*AFRD*FCSFRRSSC*WVYK 1479 Score = 55.6 bits (115), Expect(2) = 3e-13 Identities = 32/73 (43%), Positives = 39/73 (53%) Frame = -1 / +2 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+QTGQ *MT+ QQ L Y LI G+L N PL A RQ R ++ QL G Sbjct: 1088 LMQTGQVV*MTENQQEDLLYLWGLILCPGVLGNNPLCQGRALRQNIRLWRILQLS*CGYK 1267 Query: 1116 PC*RSWV*KALRL 1078 PC* +W L+L Sbjct: 1268 PC*ENWELSLLKL 1306 Score = 40.5 bits (82), Expect(2) = 3e-13 Identities = 25/50 (50%), Positives = 29/50 (58%) Frame = -1 / +3 Query: 1053 EPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQ 904 EP+ I FM QS R I IL E E I+ LF+Q+IKLLMGLQ Sbjct: 1329 EPNIYQLILCFMQGQSI*RLIIIL*ENECHISF*RLILFLQEIKLLMGLQ 1478 Score = 49.6 bits (102), Expect(2) = 5e-13 Identities = 31/82 (37%), Positives = 41/82 (50%) Frame = +1 / -1 Query: 1066 TRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQ 1245 T++ + * +P L P QL + P LP+C QW+V * + D* +I Q Sbjct: 1318 TKS*QL*ETQFPILLTRFVPTLTQL*YSPQPYILPQCSTLTQWIVS*HSRTQD*TPQI*Q 1139 Query: 1246 THLLNVCHLGILPSLN*KKHSQ 1311 LL CHL LPSL+* H Q Sbjct: 1138 ILLLIFCHLYYLPSLH*NIHEQ 1073 Score = 45.5 bits (93), Expect(2) = 5e-13 Identities = 24/54 (44%), Positives = 30/54 (55%) Frame = +1 / -3 Query: 904 L*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCH 1065 L*TH QLDLL E + + Y+ L L QN+N AL HE D ++WL H Sbjct: 1478 L*TH*QLDLLKEQNQSLKAYVTLVLLQNDNQPLYALSLHETQD*LINIWLLSYH 1317
>LOC_Os04g08000:12004.t00675:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9388 Score = 365 bits (791), Expect(2) = e-105 Identities = 145/240 (60%), Positives = 190/240 (79%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA D++K+ G+ CKP TPL +EKLS EGT + D T+YR +VGALQYLTL Sbjct: 6742 LTQEKYAKDVLKRVGM*DCKPVSTPLLVSEKLSASEGTLLGPNDATQYRSVVGALQYLTL 6921 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TR DI+++VNKVC FLHAPT H+ KRI+RY+K+T ++GL KS S LV+ F+++DW Sbjct: 6922 TRLDIAYSVNKVCQFLHAPTITHWAVVKRILRYIKYTTHLGLEIHKSSSLLVNGFTDADW 7101 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 A C+DDRRSTGGFA++ G NL+SWSARKQATVSRSS EA YKALAN AE++W+Q++L+E Sbjct: 7102 ASCIDDRRSTGGFAVYIGSNLVSWSARKQATVSRSSTEAEYKALANVIAEIMWIQTLLQE 7281 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQ 923 + I++ + WCDN+GA +LSA+ VFHARTKHIE+D+HF+ ERV KLL+I +I SKD+ Sbjct: 7282 ISIEAPRAAKVWCDNIGAKHLSAHPVFHARTKHIEVDYHFMRERVTRKLLEIEYISSKDK 7461 Score = 39.1 bits (79), Expect(2) = e-105 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -3 / +3 Query: 922 VADGFTKALRTQSFEDFKHNLNLIKL 845 +ADGFTK L + FEDF+ NLN L Sbjct: 7461 IADGFTKPLAVRQFEDFRSNLNFKSL 7538 Score = 214 bits (461), Expect = 2e-54 Identities = 120/239 (50%), Positives = 140/239 (58%) Frame = +3 / -3 Query: 927 SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNS 1106 S + I +S + TLS K* S S+C V A*KT A++ +AP LSHQ L I S Sbjct: 7457 SLDEIYSISSNFLVTLSLIK**STSICLVRA*KTG*AERCLAPILSHQTFAALGASILIS 7278 Query: 1107 FSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQ 1286 + C H+ SA+ A ALY AS+LDL+TVACFLA H+ RL P A PPV+ LSS AQ Sbjct: 7277 CNKVCIHIISAITLAKALYSASVLDLDTVACFLALHDTRLEPI*TAKPPVDLLSSIQLAQ 7098 Query: 1287 SELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVS 1466 S K TS + DL P V YL I L + +VGACKN*HTLFT IS LV Sbjct: 7097 SASVKPFTSRDEDL*ISNPR*VVYLIYLRILLTTAQCVIVGACKN*HTLFTE*AISSLVK 6918 Query: 1467 VKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 VKY*RAPT LY V S VPS+ D+FS KGV GLQ P F S+AYFS* R Sbjct: 6917 VKY*RAPTTLLY*VASFGPRSVPSLADNFSETSKGVLTGLQSYIPTLFNTSLAYFS*VR 6741 Score = 134 bits (287), Expect = 2e-30 Identities = 80/220 (36%), Positives = 114/220 (51%) Frame = +2 / -2 Query: 977 SHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*C 1156 SHKM I+ + +SMK+ + R++ NIVTP S R FYT LL L+P+ FS I Sbjct: 7407 SHKMIIHFYMFSTSMKNRMSRKMLSPNIVTPNLRSSRCFYTYLLQQSLYPHYFSYNISQS 7228 Query: 1157 LVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI 1336 + C ARS + LF P*+ + + CK C* SVI +CP+ I K+ HK R L Sbjct: 7227 FIFCFSARSRHCCLFPCTP*H*VGANINCKTPC*PSVIYTACPICISKTIHKQR*RLMNF 7048 Query: 1337 *TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH 1516 * + + +IS +L C V M +LT+ ++ +I+ C ILKS+Y T + S + Sbjct: 7047 *PKMSCILNIS*NSLDHCPVCYSRSMQELTYFIH*ISNIKPC*S*ILKSSYYTPILSCII 6868 Query: 1517 *IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 +C+F R F +*RS F L + IFFL Sbjct: 6867 WTKKCTFTCRQFL*DK*RSTYRFAILHTYSL*YILGIFFL 6748 Score = 98.2 bits (208), Expect = 1e-19 Identities = 57/157 (36%), Positives = 79/157 (50%) Frame = -2 / +3 Query: 1487 RCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTC 1308 R SSVF+ K *Y L + + V C+ +++L S Q SKI Y W + V C Sbjct: 6897 RSSSVFNFNKA*YCLFSE*SMSVLACSYYNTLGSGQENSKIY*VYNSSWVRNS*VFISAC 7076 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SH 1128 E F+* RLG++ R*Q NR C+++W M C +TS+ I*H R+ C+S*++ Sbjct: 7077 EWFY*CRLGKLYR*QKVNRGFCSLYWLQPSVMECKETSNSV*I*H*SRI*SFG*CYS*NN 7256 Query: 1127 MGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC 1017 + G Y+ * LV*Q W C S SC Sbjct: 7257 VDTDFVAGDKYRST*SCEGLV*QYWG*ASFCSSCFSC 7367 Score = 97.3 bits (206), Expect = 3e-19 Identities = 89/222 (40%), Positives = 113/222 (50%) Frame = -1 / +2 Query: 1638 LKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQ 1459 L+KNM + +*+ K+ N LLYL Q+N L K H +Q LN V * LFSI* Q Sbjct: 6746 LRKNMPRMY*RE*VCKIANL*VLLYLSQRNCLQVKVHFLVQMMQLNIGV**ELFSI*L*Q 6925 Query: 1458 DLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLFLIQTGQ 1279 LI + * + VS M T Q *D+ +I+ IL * S L L*++ L+Q GQ Sbjct: 6926 GLILLIQ*IKYVSSCMLLL*HTGQWSREF*DILSIQLILG*KFISLHLCL*MVLLMQIGQ 7105 Query: 1278 DA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSW 1099 *MT+ QQ LQ+ L HG+ NK DLA +Q + M LK G C R Sbjct: 7106 AV*MTEGQQGVLQFILAPT*CHGVQGNKQQCLDLALKQNIKLWLML*LK*CGYRLCCRR* 7285 Query: 1098 V*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCER 973 V*K L L GVT+L L I FML + + I IL E+ Sbjct: 7286 V*KHLELRRFGVTILGLSIFLLILFFMLVLNI*KWIIIL*EK 7411 Score = 66.1 bits (138), Expect = 7e-10 Identities = 58/171 (33%), Positives = 77/171 (45%) Frame = +1 / -1 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLV 1155 L+ N+N + HE+ D Q Q+CHT+ + * LY +P QL H Sbjct: 7408 LS*NDNPLLYV*YEHEKQDEQKDA*PQYCHTKPSQL*VLLYLSPATKSVSTLFQL*H*PK 7229 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*N 1335 L +C*I LV +M Q LQ LL CHL LP+L+ HSQ T Sbjct: 7228 LYILLQC*I*TLLLVSLHSMTLGWSQYKLQNPLLTFCHLYSLPNLHQ*NHSQAEMKTYEF 7049 Query: 1336 LDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*VSNTEEHL 1488 L Q Y +IL ++ L S L H +T+ ++YQ L NTEE L Sbjct: 7048 LTQDELYT*YILEFS*PLPSVL**EHARTDILYSLNKQYQALLKLNTEELL 6896
>LOC_Os05g10520:12005.t00887:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4808 Score = 258 bits (557), Expect(2) = e-105 Identities = 106/162 (65%), Positives = 135/162 (83%) Frame = -3 / +1 Query: 1309 VSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEV 1130 +SA+S++DWAGCLDDRRSTGGFA++ G NL+S +A+KQATVSRSS EA YKALANATA++ Sbjct: 3409 LSAYSDADWAGCLDDRRSTGGFAVYLGDNLVS*NAKKQATVSRSSTEAEYKALANATAKI 3588 Query: 1129 IWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLD 950 + VQ++L+EL I S T WCDN+GA YLS N VFHARTKHIE+D+HFV ERVA KLL Sbjct: 3589 MRVQTLLQELHISSPSTA*LWCDNMGARYLSFNSVFHARTKHIEVDYHFVRERVAQKLLQ 3768 Query: 949 IRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 + ++ ++DQVADGFTK L + E+F++NLNL KL*LR+GV+ Sbjct: 3769 VDYVSTRDQVADGFTKPLSVRQLENFRYNLNLGKL*LREGVR 3894 Score = 146 bits (313), Expect(2) = e-105 Identities = 60/106 (56%), Positives = 77/106 (72%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKY +DL+K+ G+ CK TPLS EKL EGT + D T+YR +VG LQ Sbjct: 3078 NGILLTQEKYVSDLLKRTGMSDCKSVNTPLSPNEKLVANEGTVLGQNDATQYRSIVGTLQ 3257 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 YLTLTRPDI+F+VNKV FLHAPTT+H+ A KRI+RY++ +GL Sbjct: 3258 YLTLTRPDIAFSVNKVYQFLHAPTTLHWAAVKRILRYLRQCTKLGL 3395 Score = 171 bits (367), Expect(2) = 1e-63 Identities = 90/176 (51%), Positives = 103/176 (58%) Frame = +3 / -1 Query: 780 HKISYMVTTLTEPACLTPFLNHNFIXXXXXXXXXXXXVRKAFVNPSAT*SFE*INRMSKS 959 HK + + L +P LTP LNHNF + V PSAT*S KS Sbjct: 3938 HKCQLIYSYL*KPYHLTPSLNHNFPKLRLYLKFSSCLTERGLVKPSAT*SLVET*STCKS 3759 Query: 960 LFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSA 1139 ATLS TK* S S+C VLA*KT L D+Y+AP LSH V L I NS CT + A Sbjct: 3758 FCATLSRTK**STSICLVLA*KTELKDRYLAPILSHHNYAVEGLLICNSCKSVCTRIIFA 3579 Query: 1140 VAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKAL 1307 VA A ALY AS+LDL+TVACFLA + +L PK A PPV+ LSSRHPAQS E AL Sbjct: 3578 VALAKALYSASVLDLDTVACFLAF*DTKLSPKYTAKPPVDLLSSRHPAQSASE*AL 3411 Score = 94.1 bits (199), Expect(2) = 1e-63 Identities = 51/98 (52%), Positives = 58/98 (59%) Frame = +3 / -2 Query: 1341 PIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTE 1520 P F C YL I L A + VVGA +N*+TLFT K ISGLV VKY + PT LY V S Sbjct: 3391 PSFVHCLKYLRILLTAAQCRVVGA*RN*YTLFTEKAISGLVKVKYCKVPTILLY*VASFC 3212 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 VPS+ +FS+ DKGV LQ P F KS YFS Sbjct: 3211 PKTVPSLATNFSLGDKGVLTDLQSLIPVLFNKSDTYFS 3098 Score = 68.9 bits (144), Expect(4) = 1e-23 Identities = 40/102 (39%), Positives = 55/102 (53%) Frame = +2 / -3 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F K I +LI N +Q+ +C S S+KM + N+ SSMK+ I V S+I+TP+ Sbjct: 3816 FSKTICHLISCRNIIYLQKLLCYSFSNKMIVNFNMFSSSMKNRIKG*VPCSHIITPQLRC 3637 Query: 1082 LRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 R Y LL* LHP++F C I + ARS + LF S Sbjct: 3636 RRTAYM*LL*KCLHPHNFCCSISQSFILSFSARS*HCSLFLS 3511 Score = 44.1 bits (90), Expect(4) = 1e-23 Identities = 25/69 (36%), Positives = 36/69 (52%) Frame = +2 / -1 Query: 1364 ISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHE 1543 IS +L C + W M KL +L+Y + +I S + IL S+Y TS+ SS+ C+ Sbjct: 3368 IS*NSLNCCPM*SSWSMKKLIYLIY*ESNIWSSQS*IL*SSYNTSILSSIILSQNCTLVS 3189 Query: 1544 R*FFCTR*R 1570 F R*R Sbjct: 3188 NQFLIRR*R 3162 Score = 28.1 bits (55), Expect(4) = 1e-23 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 / -3 Query: 1229 SKKYCKPTC*TSVI*ASCPV*IRKST 1306 S+ Y K T +SVI SCPV IR ST Sbjct: 3489 SQIYSKTTGRSSVIKTSCPVCIRVST 3412 Score = 24.4 bits (47), Expect(4) = 1e-23 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +2 / -3 Query: 827 NTLP*SQLYQVEIMFEVF 880 NTLP SQL VEI+ ++F Sbjct: 3891 NTLPQSQLS*VEIVSKIF 3838 Score = 73.0 bits (153), Expect(3) = 5e-21 Identities = 49/134 (36%), Positives = 66/134 (49%) Frame = -2 / +3 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SH 1128 +C * RLGRM *Q RW C IF + C*+TS+ +I*H V C+S ++ Sbjct: 3411 KCLL*CRLGRMS**QKIYRWFCCIFGRQLSILEC*ETSYSVKI*H*S*V*SFG*CYSKNY 3590 Query: 1127 MGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGH 948 GA V YK+ S+ +V* S + + SC*N +* SFC R+S Sbjct: 3591 AGANTFTRVTYKQSFYSVVVV**YGSKVPIL*FCFSC*N*TY*S*LSFCSRKSSTEAFAG 3770 Query: 947 SVYSFKRSSC*WVY 906 + +KRSS W Y Sbjct: 3771 RLCFYKRSSGRWFY 3812 Score = 37.7 bits (76), Expect(3) = 5e-21 Identities = 28/83 (33%), Positives = 42/83 (50%) Frame = -1 / +1 Query: 1635 KKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQD 1456 ++NM +*K L + LYL+ +N+L + + LLN +V * L+SI* D Sbjct: 3097 RRNMYLIY*KELV*VTASQLIHLYLLMRNWLLTRVQFWDKMMLLNIEVL*ELYSI*L*LD 3276 Query: 1455 LISPLL*TRCVSFYMHQPQFTSQ 1387 I * R +SF+M Q + Q Sbjct: 3277 QILLSQ*IRYISFFMLQLLYIGQ 3345 Score = 29.0 bits (57), Expect(3) = 5e-21 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -2 / +3 Query: 863 SQLDKVVIKEGC*TSWF 813 SQL KVVI+ GC* WF Sbjct: 3855 SQLRKVVIEGGC*MIWF 3905 Score = 57.4 bits (119), Expect(3) = 9e-19 Identities = 42/114 (36%), Positives = 57/114 (50%) Frame = -1 / +2 Query: 1311 L*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLK 1132 +*VL L+QTGQD MT+ V L Y + + +L NK DLA + + M Q K Sbjct: 3407 V*VLTLMQTGQDVLMTEDLPVVLLYIWETT*YPRMLRNKLQCQDLALKLSIKLWLMLQQK 3586 Query: 1131 SYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERE 970 GC +S++* L GV + E T I FMLE + L+ IL E+E Sbjct: 3587 LCGCKHFYKSYI*AVLLQRSCGVIIWEQGTYPLILFFMLELNILKLTIILFEKE 3748 Score = 39.6 bits (80), Expect(3) = 9e-19 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = -1 / +2 Query: 942 LFIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVLNKLV 814 +F+Q+IK M L L++ K + IST* SCD*GRVL+ +V Sbjct: 3776 MFLQEIKWQMVLLNLFLLDS*KILDTIST*ESCD*GRVLDDMV 3904 Score = 35.0 bits (70), Expect(3) = 9e-19 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -2 / +2 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSK 1335 +VF+ T Y K G+ V +C+N+S+L S SKI ET + W++ Sbjct: 3254 TVFNFD*TRYCFLSK*GISVSSCSNYSTLGSS*ENSKIFETMYKTWTQ 3397 Score = 66.6 bits (139), Expect = 5e-10 Identities = 56/164 (34%), Positives = 76/164 (46%) Frame = +1 / -2 Query: 814 NQLV*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNEN 993 N ++*HP ITT S*D +*+ ++ * H LDLL + + + L L QN++ Sbjct: 3904 NHII*HPPSITTFLS*DCI*NFLAV*QKEV**NHLPLDLL*KHNLPAKASVLLFLEQNDS 3725 Query: 994 LSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPR 1173 Q F*HE+ + + L + HT LY T + AP * L H T + Sbjct: 3724 QLQYV*F*HEKQN*RIGTLLPYYHTTTTL*KDCLYVTLVKVFAPA*FLL*H*PKLYTQLQ 3545 Query: 1174 C*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKH 1305 C*I LV * + + I Q H CH ILPSL+ KH Sbjct: 3544 C*ILTL*LVS*HSRILSCLPNIQQNHR*IFCHQDILPSLHQSKH 3413
>LOC_Os05g12290:12005.t01059:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4155 Score = 370 bits (803), Expect(2) = e-104 Identities = 157/250 (62%), Positives = 192/250 (76%) Frame = -3 / +1 Query: 1573 TPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVH 1394 TP+S EKL EG + D T+YR +VGALQYLTLTRPDISF+VNKV FL PT +H Sbjct: 3403 TPMSIAEKLLASEGVTLGVHDATQYRSIVGALQYLTLTRPDISFSVNKVYQFLQNPTDIH 3582 Query: 1393 FTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLIS 1214 + A KRI+RYV+ TL +GL +S S++VSAFS++DWAGCLDDRRS GGFA+F G NL+S Sbjct: 3583 WAAVKRILRYVQGTLGLGLRIDRSFSSIVSAFSDADWAGCLDDRRSIGGFAVFLGTNLVS 3762 Query: 1213 WSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSA 1034 WSARKQATVSRSS EA YKALANA AE++WV+ +L+ELGI ++ WCDN+G TYLS Sbjct: 3763 WSARKQATVSRSSTEAEYKALANAIAEIMWVRKLLEELGIPHPRSSQLWCDNIGTTYLSV 3942 Query: 1033 NLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 N VF+ART HIE+D+HFV E+VA K L+IRF+ SKDQVADGFTK L + + F +NLNL Sbjct: 3943 NPVFYARTMHIEVDYHFVREQVAQKQLEIRFVSSKDQVADGFTKPLPVRQLQLFCNNLNL 4122 Query: 853 IKL*LRKGVK 824 L LR V+ Sbjct: 4123 GNLRLRGSVR 4152 Score = 30.9 bits (61), Expect(2) = e-104 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCK 1583 L LSQE+YA D++K G++ CK Sbjct: 3325 LLLSQERYAGDILK*VGMRNCK 3390 Score = 231 bits (498), Expect = 1e-59 Identities = 121/226 (53%), Positives = 145/226 (64%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 + V PSAT*SF+ NR+S AT S TK* S S+C VLA* T L DK V P LSH Sbjct: 4079 RGLVKPSAT*SFDDTNRISSCFCATCSRTK**STSICIVLA*NTGLTDK*VVPILSHHN* 3900 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L IP+S + TH+ SA+AFA ALY AS+LDL+TVACFLA H+ RL P+N A PP+ Sbjct: 3899 DDLGCGIPSSSNNLRTHIISAIAFAKALYSASVLDLDTVACFLALHDTRLVPRNTAKPPI 3720 Query: 1257 ERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLF 1436 + LSSRHPAQS EKALT +E DL P +V TYL+I A + VG +N* TL Sbjct: 3719 DLLSSRHPAQSASEKALTMLEKDLSILSPSPNVP*TYLSILFTAAQCISVGF*RN**TLL 3540 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGV 1574 T K+ISGLV VKY +APT Y V S PS+ +SFS +D GV Sbjct: 3539 TEKDISGLVRVKYCKAPTILRYCVASCTPKVTPSLANSFSAMDIGV 3402 Score = 68.0 bits (142), Expect(2) = 2e-17 Identities = 41/122 (33%), Positives = 66/122 (54%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCE 1305 C +VF+++KT Y+ C Q + V + ++ +L + +K+C W+ QV C+ Sbjct: 3492 CFTVFNSHKTRYIFLC*QSLSVSSESH*YTLGCSEENTKVCSRNIRTWT*D*QVFL*HCK 3671 Query: 1304 CFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 CF * LG + R*Q +C + *S M C*K + I*+ G + G KC+S*+++ Sbjct: 3672 CFL*C*LGWVSR*QKIYWRLCCVSRY*SCVMEC*KAGYSV*I*Y*GGI*GFGKCNS*NNV 3851 Query: 1124 GA 1119 GA Sbjct: 3852 GA 3857 Score = 42.3 bits (86), Expect(2) = 2e-17 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = -2 / +3 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 +V*Q W ++ VC + C*N A+ SFC R S G S+ K SS W + Sbjct: 3906 MV*QYWHNLFVC*PCVLC*NNAYRSGLSFCSRASSTEATGDSICVVKGSSGRWFH 4070 Score = 51.5 bits (106), Expect(2) = 3e-12 Identities = 24/52 (46%), Positives = 35/52 (67%) Frame = +2 / -1 Query: 914 ISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTP 1069 I +LI * +K N+Q +C LS+KM I+ + CSS+K + RQ+ +NIVTP Sbjct: 4062 ICHLIL*RHKSNLQLLLCYLLSNKMIIHFYMHCSSIKHRVNRQIGCANIVTP 3907 Score = 41.4 bits (84), Expect(2) = 3e-12 Identities = 29/87 (33%), Positives = 43/87 (49%) Frame = +1 / -3 Query: 1120 API*LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*K 1299 AP QL HL P P+ *I F* +M D* + Q+ CHL P+ + + Sbjct: 3856 APTLFQLLHLPKPYIPPQY*I*TL*PAF*HSMTQD*YLETQQSLQ*IFCHLDTQPNQHQR 3677 Query: 1300 KHSQV*KGTC*NLDQYSAYVSHILLYA 1380 KH Q *+ TC + Q ++ H L+++ Sbjct: 3676 KHLQC*RKTCQS*VQVLMFLEHTLVFS 3596 Score = 40.5 bits (82), Expect(3) = 5e-10 Identities = 29/69 (42%), Positives = 35/69 (50%) Frame = -1 / +2 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L*VL L+ G *MT+ L F LI HG+LE++ DL R+ R QM Sbjct: 3659 LAL*VLSLMLIGLGV*MTEDLLEALLCF*VLILCHGVLESRLQCLDLVLRRNIRLWQMQ* 3838 Query: 1137 LKSYGCNPC 1111 LK GC C Sbjct: 3839 LK*CGCASC 3865 Score = 38.6 bits (78), Expect(3) = 5e-10 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = -1 / +2 Query: 1068 GVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLYV 892 GVT+L CL FMLEQ + I IL E + ++W F L Q+IK M L++ Sbjct: 3908 GVTILAQPICLLTLCFMLEQCI*KWIIILFESK*HRSNWRFDLCRQRIKWQMVSLSLFL 4084 Score = 22.6 bits (43), Expect(3) = 5e-10 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -1 / +2 Query: 1485 VLFSI*HLQDLISPLL*TRCVSFY 1414 VL+SI* QD I L T+ +SF+ Sbjct: 3491 VLYSI*LSQDQIYLSLLTKSISFF 3562 Score = 42.3 bits (86), Expect = 0.010 Identities = 23/54 (42%), Positives = 29/54 (53%) Frame = +1 / -3 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 * H LD L E P + L+L QN+N ALF*H+ QT+ Q+CHT Sbjct: 4069 *NHLPLDPLTTQIESPVASVLLALEQNDNPLLYALF*HKTQG*QTNRLCQYCHT 3908
>LOC_Os06g39790:12006.t03676:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4017 Score = 371 bits (805), Expect = e-102 Identities = 148/222 (66%), Positives = 186/222 (83%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q KYA DL+ K G++ CK TPL+ TEKL G P+ + D+T+YR +VG LQYLTL Sbjct: 3352 LNQAKYALDLLTKVGMKDCKSVSTPLAVTEKLMAHRGDPLGTEDSTRYRSIVGGLQYLTL 3531 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPD++FAVNKVC +LHAPT+ H++A KRI+RY+K T+++GL+F +S STLVSAFS++DW Sbjct: 3532 TRPDLAFAVNKVCQYLHAPTSEHWSAIKRILRYIKGTVDVGLHFKRSSSTLVSAFSDADW 3711 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGF I+FGPN++SWSARKQ TVSRSS EA YKA+ANATAE+IWV S+L+E Sbjct: 3712 AGSLDDRRSTGGFVIYFGPNIVSWSARKQPTVSRSSTEAEYKAMANATAELIWVHSVLEE 3891 Query: 1102 LGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 LG+K ++ P WCDN+GATYLS+N VFHARTKHIEI +HFV* Sbjct: 3892 LGVKIAQPPVLWCDNLGATYLSSNPVFHARTKHIEIGYHFV* 4017 Score = 227 bits (491), Expect = 1e-58 Identities = 120/219 (54%), Positives = 139/219 (63%) Frame = +3 / -2 Query: 978 HTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASA 1157 +TK* IS+CFV A*KT DKYVAP LSH G +F PNS + T + SAVA A A Sbjct: 4016 YTK**PISICFVRA*KTGFDDKYVAPKLSHHNTGG*AIFTPNSSRTE*TQINSAVALAIA 3837 Query: 1158 LYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKF 1337 LY AS+LDL+TV CFLA H+ LGPK I PPV+ LSSR PAQS EKALT VE DLLK Sbjct: 3836 LYSASVLDLDTVGCFLALHDTILGPK*ITKPPVDLLSSRLPAQSASEKALTRVELDLLKC 3657 Query: 1338 RPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVST 1517 +P +V YL IR A + + VGA + *HTL TAK SGLVSVKY PT LY V+S+ Sbjct: 3656 KPTSTVPLIYLNIRFIADQCSEVGA*RY*HTLLTAKAKSGLVSVKYCNPPTMLLYRVLSS 3477 Query: 1518 ESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 G P +FSV GV LQ P +KS AYF+ Sbjct: 3476 VPRGSPLCAINFSVTASGVETDLQSFIPTLVSKSKAYFA 3360 Score = 124 bits (266), Expect = 1e-27 Identities = 70/218 (32%), Positives = 117/218 (53%) Frame = -2 / +3 Query: 1631 KICNRLGKKAWPTRL*THTHSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT* 1452 K+C RL +W RL* H+ R+ R + + G + +Q R ++ +T++T Sbjct: 3363 KVCFRLAN*SWYERL*ISFHAASCDREVDGTQRRSSWYRG*HSVQEHCRRITILNTHQTR 3542 Query: 1451 YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMP 1272 + CC G+ + +C+ +L S + +I + W +V FY+ +C F* LG Sbjct: 3543 FGFCC**GMSISSCSYFRTLVSYKTNIEIYQRNC*CWFAL*EV*FYSSQCLF*C*LGW*S 3722 Query: 1271 R*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYK 1092 R*Q R CN+ WT* M C*+T++ Q+*+R R+ +C+ * ++G+ + +G K Sbjct: 3723 R*QKVYRRFCNLLWT*YCVMEC*ETTNSIQV*YRSRI*SYGQCYC*VNLGSFSS*RIGSK 3902 Query: 1091 KL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCV 978 + +V*Q S+I + +SSLSC N+A+*D S C+ Sbjct: 3903 NCSTTCVVV*QFRSNIFIIKSSLSCTNEAY*DWLSLCI 4016 Score = 84.9 bits (179), Expect = 1e-15 Identities = 54/136 (39%), Positives = 71/136 (52%) Frame = +2 / -1 Query: 980 HKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CL 1159 +K+ LN+L S MKD I +C S IVTP+ L FY+Q + ++P S I Sbjct: 4014 YKVITNLNMLRSCMKDWI***ICCS*IVTPQHRWLSNFYSQFFKN*MNPN*LSSSIGHSF 3835 Query: 1160 VPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI* 1339 + C R G LF S P*+ IRSK K +C SVI* + P+ IRK T R ++ Sbjct: 3834 IFCFGTRPGYCWLFPSTP*HNIRSKVNYKTSCRPSVI*TTSPISIRKGTD*SRTRPLKVQ 3655 Query: 1340 TNIQRMFHISYYTLGS 1387 TNI F IS Y+ S Sbjct: 3654 TNINSSFDISQYSFYS 3607 Score = 41.8 bits (85), Expect(2) = 5e-08 Identities = 19/40 (47%), Positives = 24/40 (60%) Frame = +1 / -3 Query: 982 QNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYP 1101 Q++N SQ A F HERLD +M L +CHT + FL P Sbjct: 4012 QSDNQSQYASFVHERLDLMINMLLLNCHTTTQVVEQFLLP 3893 Score = 36.3 bits (73), Expect(2) = 5e-08 Identities = 33/101 (32%), Positives = 49/101 (48%) Frame = +1 / -3 Query: 1165 LPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQ 1344 L R * W +V * +M *VQ LQ L CHL P+ + K+H * T *+ +Q Sbjct: 3829 LLRY*TWILLVVS*HSMTQY*VQSKLQNLL*TFCHLDYQPNQHQKRH*LE*N*TS*SANQ 3650 Query: 1345 YSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQVL*V 1467 + ++ +I ++ L + L H + P QQ+ V *V Sbjct: 3649 HQQFL*YISIFVL*LTNVLK*EHEDIDIPY*QQKPNLVW*V 3527 Score = 59.7 bits (124), Expect = 6e-08 Identities = 41/108 (37%), Positives = 54/108 (50%) Frame = -1 / +2 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V FL+ G *MT+ Q L + LDLI HG+L N +P L +Q + M L + Sbjct: 3689 VPFLMLIGLVV*MTEGLQEVL*FTLDLILCHGVLGNNQQYPGLVPKQNIKLWPMLLLS*F 3868 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFIL 982 G ++W *K L GVT+ E H I SFM E+S LR + L Sbjct: 3869 GFIQFLKNWE*KLLNHLCCGVTI*EQHIYHQIQSFMHERSILRLVITL 4012
>LOC_Os06g09740:12006.t00852:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3541 Score = 282 bits (611), Expect(3) = 9e-93 Identities = 113/183 (61%), Positives = 144/183 (78%) Frame = -3 / +2 Query: 1486 GALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLV 1307 GAL YLTLTR DI+F+VNKVC FLH PTTVH+ A KRI+RY++ ++ +GL KS + +V Sbjct: 998 GAL*YLTLTRLDIAFSVNKVCQFLHTPTTVHWAAIKRILRYLRQSIKLGLKICKSKTMMV 1177 Query: 1306 SAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVI 1127 SA+S++DW CLDD+RSTGGFA++ G N++SWSA+KQ +SRSS A YKAL NATAE++ Sbjct: 1178 SAYSDADWVECLDDKRSTGGFAVYLGDNMVSWSAKKQTIISRSST*AEYKALVNATAEIM 1357 Query: 1126 WVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDI 947 WVQ++L+EL I S T WCDN+GA YLS N VFHARTKHI D+HFV ERVA KLL + Sbjct: 1358 WVQTLLQELHIDSPTTAQLWCDNMGARYLSFNHVFHARTKHIATDYHFVRERVAQKLLQV 1537 Query: 946 RFI 938 ++ Sbjct: 1538 GYV 1546 Score = 52.8 bits (109), Expect(3) = 9e-93 Identities = 24/41 (58%), Positives = 33/41 (80%) Frame = -3 / +1 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL*LRKGVKQAGS 812 +KDQVA+GFTK L + E+FK+NLNL +L*LR+GV+ + S Sbjct: 1546 TKDQVANGFTKPLSERLPENFKYNLNLGRL*LREGVR*SSS 1668 Score = 46.0 bits (94), Expect(3) = 9e-93 Identities = 19/38 (50%), Positives = 28/38 (73%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGT 1529 L+QEKYA+DL+K + CKP T LS++EKL + +G+ Sbjct: 847 LTQEKYASDLLK*TRMSDCKPVSTLLSTSEKLKVDKGS 960 Score = 194 bits (419), Expect(3) = 7e-56 Identities = 97/174 (55%), Positives = 112/174 (64%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 ATLS TK S+++C VLA*KT L DKY+AP LSH V+ L + NS TH+ SAVA Sbjct: 1518 ATLSRTKW*SVAICLVLA*KT*LKDKYLAPMLSHHS*AVVGLSMCNSCKRV*THIISAVA 1339 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 F ALY A +LDLE + CF A HE L P+ ANPPV+ LSS+H QS E ALT + D Sbjct: 1338 FTKALYSAYVLDLEIIVCFFALHETMLSPRYTANPPVDLLSSKHSTQSASE*ALTIIVLD 1159 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAP 1487 L FRP C YL+I L A + TVVG CKN* TL T K IS LV VKY* AP Sbjct: 1158 LQIFRPSLMDCLKYLSILLIAAQCTVVGVCKN*QTLLTEKAISSLVKVKY*SAP 997 Score = 33.6 bits (67), Expect(3) = 7e-56 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +1 / -1 Query: 814 NQLV*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDL 930 N +*HP ITT *D +*S V + * H QLDL Sbjct: 1666 NYFI*HPLSITTFLG*DCI*SFLEVVLTMV**NHLQLDL 1550 Score = 29.5 bits (58), Expect(3) = 7e-56 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 / -3 Query: 1548 SFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 +FS++DK V GLQ F +S AYFS Sbjct: 941 NFSLVDKSVLTGLQSLILVHFNRSEAYFS 855 Score = 90.4 bits (191), Expect(2) = 2e-23 Identities = 53/151 (35%), Positives = 81/151 (53%) Frame = -2 / +1 Query: 1421 VFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVC 1242 + +N+S+L S +++ ET W K V Y +C F* RLGRM R*Q N W+C Sbjct: 1063 ILAYSNYSTLGSY*KNTEVLETIH*TWPKDL*V*NYDGQCLF*CRLGRMFR*QKVNWWIC 1242 Query: 1241 NIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFLV* 1062 I * M C +T + F++ + RVQ SKC+ *+++G+ + +++ +V* Sbjct: 1243 CISR**HGLMECKETDNYFKVKYISRVQSLSKCYC*NYVGSDSLARIAHRQSNYRSTMV* 1422 Query: 1061 QCWSHILVCQSSLSC*NKAH*DRFSFCVRES 969 Q +L+ QS LSC N + + FC RES Sbjct: 1423 QHGCKVLILQSCLSCKN*TYSN*LPFCSRES 1515 Score = 40.0 bits (81), Expect(2) = 2e-23 Identities = 22/42 (52%), Positives = 27/42 (64%) Frame = -1 / +2 Query: 939 FIQKIKLLMGLQKLYVHKVLKTSNIIST**SCD*GRVLNKLV 814 ++ KIKL M L + KTSN IST* CD* RVL+K+V Sbjct: 1541 YVLKIKLQMVLLNHCQNDFQKTSNTIST*EGCD*ERVLDKVV 1666 Score = 94.5 bits (200), Expect(2) = 8e-21 Identities = 61/178 (34%), Positives = 88/178 (49%) Frame = +2 / -1 Query: 947 NVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHP 1126 N+Q F+C SLS+KM I + S MKD I V +++VTP Y Q L L+P Sbjct: 1537 NLQ*FLCYSLSNKMVISCYMFSSCMKDMIEG*VPCTHVVTP*LSGSWTVYVQFLQESLNP 1358 Query: 1127 YDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKST 1306 ++FS I * V CL N+ LF P*+ + + Y K T * VI* PV IR T Sbjct: 1357 HNFSSSIY*GFVLCLCT*P*NNCLFLCTP*DHVIT*IYSKSTS*PFVI*TFYPVCIRIGT 1178 Query: 1307 HKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILK 1480 L ++* + + Y+ SC + C W M +LT+ + + +I + +LK Sbjct: 1177 DHHSFRLTDL*AKFNGLSQVPQYSFNSCPMYCSWSMQELTNFIN*ESNI*PSQS*VLK 1004 Score = 27.2 bits (53), Expect(2) = 8e-21 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 / -2 Query: 815 TSLFNTLP*SQLYQVEIMFEVF 880 T+L NTL SQ VEI+FEVF Sbjct: 1665 TTLSNTLSQSQPS*VEIVFEVF 1600 Score = 37.3 bits (75), Expect(2) = 6e-05 Identities = 24/61 (39%), Positives = 31/61 (50%) Frame = -1 / +3 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 V L+QTG + *MT Q V L Y + HG+ N+ LF +Q T+ * M LK Sbjct: 1179 VPILMQTG*NV*MTKGQLVDLLYI*VITWSHGVQRNRQLFQGQVHKQSTKP**MLLLKLC 1358 Query: 1125 G 1123 G Sbjct: 1359 G 1361 Score = 36.3 bits (73), Expect(2) = 6e-05 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = -2 / +3 Query: 929 RSSC*WVYKSFTYTKF*RLQT*SQLDKVVIKEGC*TSWF 813 RSSC W Y + T +LQ SQ KVVI+ GC* F Sbjct: 1551 RSSCKWFY*TIVRTTSRKLQIQSQPRKVVIERGC*IK*F 1667 Score = 33.1 bits (66), Expect(2) = 0.26 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +1 / -3 Query: 1237 ILQTHLLNVCHLGILPSLN*KKH 1305 I Q H L CHL ILPSL+ +H Sbjct: 1247 IQQIHQLTFCHLNILPSLHQNRH 1179 Score = 27.6 bits (54), Expect(2) = 0.26 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +1 / -3 Query: 958 VYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 +++ LSL QN N F HER D + S CHT Sbjct: 1526 IFVLLSLEQNGNQLLYV*FLHERHD*RISTLHPCCHT 1416
>LOC_Os02g43390:12002.t03924:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8917 Score = 337 bits (731), Expect = 1e-91 Identities = 140/214 (65%), Positives = 172/214 (80%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L LSQ KY DL+KK + CKP TPLS++EKLSL EG + S D T+YR +VGALQ Sbjct: 6795 DGLLLSQGKYTADLLKKTNMSDCKPFNTPLSTSEKLSLHEGDLLGSSDATQYRSIVGALQ 6974 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC FLHAPTTVH+ KRI+RY+K+T ++GL F KS S LVSAF+ Sbjct: 6975 YLTLTRPDISFSVNKVCQFLHAPTTVHWATVKRILRYLKYTASLGLKFEKSKSGLVSAFT 7154 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG LDDRRSTGGFAI+ G NL+SWSARKQATVSRSS EA YKALAN TAE++W+ + Sbjct: 7155 DADWAGSLDDRRSTGGFAIYLGSNLVSWSARKQATVSRSSTEAEYKALANVTAELMWI*T 7334 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHAR 1013 +L+ELGI++ + WCDN+GA +LSAN VFH + Sbjct: 7335 LLQELGIETPRAAKVWCDNMGAKHLSANHVFHVQ 7436 Score = 233 bits (503), Expect = 3e-60 Identities = 118/207 (57%), Positives = 135/207 (65%) Frame = +3 / -1 Query: 1020 *KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVAC 1199 *KT LADK +AP LSH L + +PNS S H+ SAV ASALY AS+LDL+TVAC Sbjct: 7429 *KT*LADKCLAPMLSHHTFAALGVSMPNS*SKVYIHINSAVTLASALYSASVLDLDTVAC 7250 Query: 1200 FLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIR 1379 FLA H+ RL P+ IA PPV+ LSSR PAQS KALT + D P +V F YL I Sbjct: 7249 FLALHDTRLEPR*IAKPPVDLLSSRDPAQSASVKALTRPDFDFSNLSPRLAVYFKYLKIL 7070 Query: 1380 LAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSV 1559 +*TVVGACKN*HTLFT KEISGLV VKY RAPT LY V S + PS R+SFS Sbjct: 7069 FTVAQ*TVVGACKN*HTLFTEKEISGLVKVKYCRAPTMLLYCVASLDPSKSPSCRESFSD 6890 Query: 1560 LDKGVGVGLQPCRPGFFTKSVAYFS*E 1640 +DKGV GLQ F +KS YF *+ Sbjct: 6889 VDKGVLKGLQSLILVFLSKSAVYFP*D 6809 Score = 64.3 bits (134), Expect(2) = 1e-18 Identities = 40/110 (36%), Positives = 59/110 (53%) Frame = +2 / -3 Query: 989 KIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPC 1168 K+ + L +MKD I Q+ S+++TP S R+F Q L L+P+ F I C V Sbjct: 7460 KLLMLRLFLNMKDMIS*QMFSSHVITPYLCSSRSFNAQFLKQSLYPHQFCSYISKCFVFR 7281 Query: 1169 LDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCR 1318 A S + LFS P*+++ +K K + + VI S P+ I KST+K R Sbjct: 7280 FSA*SRHCCLFSCTP*HKVGAKINSKASSRSPVIKGSSPICICKSTNKTR 7131 Score = 50.1 bits (103), Expect(2) = 1e-18 Identities = 22/53 (41%), Positives = 32/53 (60%) Frame = +2 / -3 Query: 1355 MFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 + IS L C +NC M*KLTHL++ +GDIRS + +L+S Y S+ + Sbjct: 7094 ILQIS*NPLHCCPMNCSRSM*KLTHLIH*EGDIRSSQS*VLQSPYYASILCGI 6936 Score = 70.7 bits (148), Expect = 3e-11 Identities = 51/157 (32%), Positives = 77/157 (49%) Frame = -2 / +2 Query: 1487 RCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTC 1308 R S++ + T*YLL + GV VFTC+ +SSL + + KI E Y++ + ++ ++C Sbjct: 6962 RGSAILNFD*T*YLLLSE*GVSVFTCSYYSSLGNSEEDFKIFEVYSQSRT*V*KIKVWSC 7141 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SH 1128 CF+ RLG +P *Q +C + W M C KT + I H +Q T C+ Sbjct: 7142 *CFYRCRLGWIP**QEIYWRLCYLSWLQPCVMECKKTGNSV*IKH*SGIQSTC*CNCRID 7321 Query: 1127 MGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC 1017 + A +G+ * +V* S V S LSC Sbjct: 7322 VDIDFASRIGH*NS*SCKGMV**HGS*TFVS*SCLSC 7432 Score = 45.5 bits (93), Expect(2) = 1e-08 Identities = 34/104 (32%), Positives = 45/104 (43%) Frame = -1 / +1 Query: 1317 LHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQ 1138 L L VL +Q G D MT L + L HG+ EN+ D A ++ T+H M Sbjct: 7132 LVLLVLLQMQIGLDPLMTGDLLEALLFILAPTLCHGVQENRQQCLDQALKRNTKHLLM*L 7311 Query: 1137 LKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQS 1006 G C ++W K L L GV E + C I SFM + Sbjct: 7312 QN*CGYRLCFKNWALKLLELQRYGVITWELNICQLIMSFMFRNN 7443 Score = 34.5 bits (69), Expect(2) = 1e-08 Identities = 20/36 (55%), Positives = 23/36 (63%) Frame = -1 / +1 Query: 1458 DLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR 1351 DLISP * RCVSFYM QF Q *D+*+I+ Sbjct: 6991 DLISPSQ*IRCVSFYMLLLQFIGQQ*RGF*DI*SIQ 7098 Score = 34.1 bits (68), Expect = 3.0 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = +1 / -2 Query: 1354 YVSHILLYAWQL*SELWLVHVKTNTPCLQQRRYQV 1458 Y S+IL + L +EL HVKT+TP +RRYQV Sbjct: 7095 YTSNILKSSSLLPNEL**EHVKTDTPYSLRRRYQV 6991
>LOC_Os11g35560:12011.t03103:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 12011 Score = 315 bits (682), Expect(2) = 5e-89 Identities = 128/177 (72%), Positives = 153/177 (86%) Frame = -3 / +3 Query: 1372 VRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQA 1193 +RY+K T+ +GL+F K STLVSAF ++DWAG LDDRRSTGGF I+FGPNL+SWSARKQ Sbjct: 11481 LRYIKGTVGVGLHFKKYSSTLVSAFFDADWAGSLDDRRSTGGFVIYFGPNLVSWSARKQR 11660 Query: 1192 TVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHAR 1013 TVSRSS EA YKA+ANATAE+IWV+S+L+ELG+K ++P WCDN+GATYLS+N VFHAR Sbjct: 11661 TVSRSSTEAEYKAMANATAELIWVRSVLEELGVKIDQSPVLWCDNLGATYLSSNPVFHAR 11840 Query: 1012 TKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 TKHIEID+HFV ERVANK+LDIRFI +KDQ+ADGFTKAL TQ+ F +NLNL KL* Sbjct: 11841 TKHIEIDYHFVQERVANKMLDIRFIGTKDQIADGFTKALSTQNLRHFMYNLNLAKL* 12011 Score = 34.5 bits (69), Expect(2) = 5e-89 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = -2 / +3 Query: 1502 IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAY 1374 +Q R +++FDT++T + L C+QG+ V +C+ +L S Y Sbjct: 11352 VQEHCRRTTIFDTHQTGFGLLCQQGMSVSSCSYFRTLVSS*TY 11480 Score = 185 bits (398), Expect(2) = 5e-61 Identities = 98/176 (55%), Positives = 108/176 (61%) Frame = +3 / -2 Query: 843 HNFIXXXXXXXXXXXXVRKAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA* 1022 HN V AFVNPSA *S IN +S L ATLS TK SISMCFVLA Sbjct: 12010 HNLAKLRLYMKCRRFCVDNAFVNPSAI*SLVPINLISNILLATLSCTKW*SISMCFVLAW 11831 Query: 1023 KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACF 1202 KT L D+ VAP LSH + G +F PNS D T + SAVA A ALY AS+LDLETV CF Sbjct: 11830 KTGLDDR*VAPKLSHHRTGD*SIFTPNSSKTDRTQINSAVALAMALYSASVLDLETVRCF 11651 Query: 1203 LADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYL 1370 LA H+ R GPK I NPPV+ LSSR PAQS +KALT VE LK P +V YL Sbjct: 11650 LALHDTRFGPK*ITNPPVDLLSSRLPAQSASKKALTKVELYFLKCNPTPTVPLIYL 11483 Score = 71.2 bits (149), Expect(2) = 5e-61 Identities = 43/93 (46%), Positives = 52/93 (55%) Frame = +3 / -1 Query: 1359 FTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPS 1538 F IRL A + + VGA + *HTL T K SGLVSVKY PT LYLV+S+ G P Sbjct: 11495 FNIPQIRLTANQCSEVGA*RY*HTLLTEKAKSGLVSVKYCSPPTMLLYLVLSSTPRGSPV 11316 Query: 1539 MRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 +FS + GVG LQ +S AYF+* Sbjct: 11315 CTINFSEMASGVGAVLQFSMLTLTNRSEAYFA* 11217 Score = 133 bits (284), Expect(2) = 7e-57 Identities = 54/101 (53%), Positives = 74/101 (73%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q KYA+DL+ K ++ CK PTPL+ +EKL + G P+ D+T+YR +VG LQYLTL Sbjct: 11212 LNQAKYASDLLVKVNMENCKTAPTPLAISEKLMVHTGDPLGVEDSTRYRSIVGGLQYLTL 11391 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIG 1340 TRPD++F+VNKVC +LHAPT+ H+ A KRI +K L +G Sbjct: 11392 TRPDLAFSVNKVCQYLHAPTSEHWLAVKRI*GILKELLVLG 11514 Score = 109 bits (233), Expect(2) = 7e-57 Identities = 55/153 (35%), Positives = 86/153 (56%) Frame = -2 / +2 Query: 1343 WSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGR 1164 W Q++ FY +CF * LG R* +R VC++ W+ S M C*KT++ F+I + Sbjct: 11510 WVTLQKI*FYFSQCFL*C*LGW*SR**KIHRRVCDLLWSKSCIMEC*KTTNSFKIKY*S* 11689 Query: 1163 VQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSF 984 +Q +C+ * ++G++ V K S +V*Q S++ + QS L C*NK H D Sbjct: 11690 IQSHGQCYC*INLGSVCLGRVRSKDRSVSSSVV*QFRSNLPIIQSGLPC*NKTHRD*LPL 11869 Query: 983 CVRESCK*TLGHSVYSFKRSSC*WVYKSFTYTK 885 C R+ +* +G+ +Y ++ S W+YKS YT+ Sbjct: 11870 CARKGSQ*NVGYQIYWYQGSDSRWIYKSIVYTE 11968 Score = 107 bits (228), Expect(2) = 2e-26 Identities = 70/173 (40%), Positives = 92/173 (53%) Frame = +2 / -1 Query: 848 LYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD 1027 L QV+I+ E+ K LC FCK I LI NK ++Q FI HK+ + L V CSSM+D Sbjct: 12005 LGQVKIVHEMPKILCRQCFCKSICYLILGTNKSDIQHFIGYPFLHKVVVNLYVFCSSMED 11826 Query: 1028 *IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSS 1207 IG V S IVTP+ L Y+ L +P FS I V S N LFSS Sbjct: 11825 RIG**VGCS*IVTPQNWRLIYLYS*LFQDRPNPN*FSSSIGHGFVFSFST*S*NCSLFSS 11646 Query: 1208 RP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 P* +I +K KP+C +S+I* + P+ I++ST R E+* N F+I Sbjct: 11645 TP*YKIWTKVNHKPSCGSSII*TTSPISIKESTD*SRTIFFEV*PNTNSSFNI 11487 Score = 33.1 bits (66), Expect(2) = 2e-26 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 / -3 Query: 1421 LTHLVYSKGDIRSCKCQILKSTYQTSV 1501 LT+LV +G IRS +CQIL S+Y V Sbjct: 11433 LTYLVDREGQIRSGECQIL*SSYNAPV 11353 Score = 75.8 bits (159), Expect = 8e-13 Identities = 53/150 (35%), Positives = 74/150 (49%) Frame = -1 / +1 Query: 1305 VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSY 1126 VL L+ G *M + Q GL + L I +HG+LEN F D + T+ M L + Sbjct: 11548 VLSLMLIGLVV*MIEDPQEGL*FTLVQILYHGVLENNEQFQDQVLKLNTKPWPMLLLN*F 11727 Query: 1125 GCNPC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 G +S *+ + L GVT+ E T PI S MLEQ+T R LC++ I W Sbjct: 11728 GFGLSWKS*E*R*ISLQFCGVTI*EQPTYHPIRSSMLEQNT*RLTTTLCKKG*PIKCWIS 11907 Query: 945 GLFIQKIKLLMGLQKLYVHKVLKTSNIIST 856 L + +I+ M LQK +H++ S I T Sbjct: 11908 DLLVPRIR*QMDLQKHCLHRIFGISCTILT 11997 Score = 47.8 bits (98), Expect(3) = 3e-08 Identities = 30/79 (37%), Positives = 38/79 (48%) Frame = +1 / -3 Query: 847 TLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HER 1026 T S*D *+ ++ V LL* H D +* P Y L Q+ + S C LF*H R Sbjct: 12006 TWPS*DCT*NAEDSV*TMLL*IHLLSDPWYQ*I*YPTFYWLPFLAQSGSQSLCVLF*HGR 11827 Query: 1027 LDWQTSMWLQHCHTRNRES 1083 DW L +CHT E+ Sbjct: 11826 PDWMIGRLLLNCHTTELET 11770 Score = 24.0 bits (46), Expect(3) = 3e-08 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 / -2 Query: 1411 HVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CPLN 1521 H T+ PC Q+R V *VSN L C C L+ Sbjct: 11443 HEDTDIPC*QRRPNPVW*VSNIVVLLQCSCTSCCLLH 11333 Score = 23.5 bits (45), Expect(3) = 3e-08 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 / -3 Query: 1180 IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKH 1305 I K ++VF* +M D Q QT L HL P+ + +KH Sbjct: 11673 ILKLFVVF*HSMIQDLDQSKSQTLLWIFYHLDYQPNQHQRKH 11548
>LOC_Os05g29690:12005.t02569:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4207 Score = 241 bits (521), Expect(2) = 1e-88 Identities = 96/144 (66%), Positives = 119/144 (82%) Frame = -3 / +2 Query: 1408 PTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFG 1229 PTTVH+ A KRI+RY+KHT++ GL +KSP+ LVS+FS++DWA CL DRRSTGGF +F G Sbjct: 3776 PTTVHWAAVKRILRYLKHTVSCGLKINKSPTLLVSSFSDADWASCLADRRSTGGFTVFLG 3955 Query: 1228 PNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGA 1049 NL+SWSARKQATVSRSS EA KALA+AT E++W+Q++L E+GI + K W DN+GA Sbjct: 3956 SNLVSWSARKQATVSRSSTEAECKALADATTEIMWLQTLLCEIGINAPKVVKMWFDNIGA 4135 Query: 1048 TYLSANLVFHARTKHIEIDFHFV* 977 YLSAN VFHARTKHIE+D+HFV* Sbjct: 4136 KYLSANPVFHARTKHIEVDYHFV* 4207 Score = 106 bits (227), Expect(2) = 1e-88 Identities = 44/78 (56%), Positives = 60/78 (76%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 ++ + L+Q KYA D++++ G+Q CKP TPL ++EKLS+ EG + D T+YR +VGAL Sbjct: 3536 EDGILLTQAKYAYDVLRRVGMQDCKPVNTPLLTSEKLSVNEGDLLGPKDATEYRSIVGAL 3715 Query: 1477 QYLTLTRPDISFAVNKVC 1424 QYLTLTR DISF+VNKVC Sbjct: 3716 QYLTLTRLDISFSVNKVC 3769 Score = 164 bits (353), Expect(2) = 1e-54 Identities = 82/143 (57%), Positives = 94/143 (65%) Frame = +3 / -2 Query: 981 TK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASAL 1160 TK* S S+C V A*KT LADKY+AP LS+ L FIP S C H+ S VA ASAL Sbjct: 4203 TK**STSICLVRA*KTGLADKYLAPMLSNHIFTTLGAFIPISHRRVCNHIISVVASASAL 4024 Query: 1161 YPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFR 1340 + AS+LDL+TVACFLA H+ RL P+ NPPVERLS+R AQS EK LT GDLL F Sbjct: 4023 HSASVLDLDTVACFLALHDTRLEPRKTVNPPVERLSARQLAQSASEKLLTRRVGDLLIFS 3844 Query: 1341 PIFSVCFTYLTIRLAAVK*TVVG 1409 P +VC YL I A + TVVG Sbjct: 3843 PQLTVCLRYLKILFTAAQCTVVG 3775 Score = 70.7 bits (148), Expect(2) = 1e-54 Identities = 37/72 (51%), Positives = 41/72 (56%) Frame = +3 / -2 Query: 1419 N*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCR 1598 +*HTL T KEIS LV VKY APT LY V S PS D+FS + KGV GLQ C Sbjct: 3774 H*HTLLTEKEISSLVKVKYCSAPTILLYSVASFGPSKSPSFTDNFSDVSKGVFTGLQSCI 3595 Query: 1599 PGFFTKSVAYFS 1634 P S AY + Sbjct: 3594 PTRLRTSYAYLA 3559 Score = 92.3 bits (195), Expect(2) = 2e-23 Identities = 52/135 (38%), Positives = 76/135 (56%) Frame = +2 / -1 Query: 977 SHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*C 1156 S+KM I + +SMK+ I + S +V P +LR+ Y+ L * L P++ C I *C Sbjct: 4207 SNKMIINFYMFSTSMKNRIS**ILSSYVVKPHFHNLRSIYSNLT*ESL*PHNLCCCIS*C 4028 Query: 1157 LVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI 1336 L C G GL SS P*+++R+ K K T *TSV * +CP+ IR++T+K L + Sbjct: 4027 LAFCFST*PGYCGLLSSTP*HKVRA*KNSKSTS*TSVS*TACPICIRETTNKKSW*LINL 3848 Query: 1337 *TNIQRMFHISYYTL 1381 *+ MF +S +L Sbjct: 3847 *STTYCMFEVSQNSL 3803 Score = 38.2 bits (77), Expect(2) = 2e-23 Identities = 25/72 (34%), Positives = 36/72 (50%) Frame = +2 / -1 Query: 1421 LTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*A 1600 LTHL+ + +I C+ IL ++ T +FS + + F R*FF + RS FT L Sbjct: 3772 LTHLINRERNI*PCQG*IL*CSHNTPIFSGILWTKQIPFIYR*FF*RKQRSIYRFTVLHP 3593 Query: 1601 RLFYQVCCIFFL 1636 + CIF L Sbjct: 3592 HTPEDIICIFSL 3557 Score = 63.4 bits (132), Expect(2) = 1e-11 Identities = 37/83 (44%), Positives = 49/83 (59%) Frame = -1 / +3 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D NI+*++ * S L L V+ L+Q GQ *+TDVQ V L +F L HG+LE+KP Sbjct: 3813 *DTSNIQ*VVD*RLISHQLFLLVVSLMQIGQAV*LTDVQLVDLLFF*ALTLCHGVLESKP 3992 Query: 1191 LFPDLASRQGTRH*QMPQLKSYG 1123 +P +Q RH* M Q + G Sbjct: 3993 QYPGQVLKQNARH*LMQQQRLCG 4061 Score = 27.2 bits (53), Expect(2) = 1e-11 Identities = 25/58 (43%), Positives = 28/58 (48%) Frame = -1 / +3 Query: 1593 KVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVS 1420 K VN LL L QKNYL K +Q LN V +SI* Q I L RCV+ Sbjct: 3600 KTVNR*ILLCLRQKNYL*MKGICLVQRMPLNIGVLWEHYSI*P*QG*IFLSLLIRCVN 3773 Score = 61.6 bits (128), Expect = 2e-08 Identities = 32/78 (41%), Positives = 46/78 (58%) Frame = -2 / +1 Query: 1370 KICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSH 1191 +I +TY++ W+K V +C F * RLG++ *QTFN W+ * M C*K SH Sbjct: 3814 EIPQTYSKLWTKD**VTNSSC**FL*CRLGKLSS*QTFNWWIYCFSRL*PCVMEC*KASH 3993 Query: 1190 CFQI*HRGRVQGTSKCHS 1137 Q+ + R+QGTS C++ Sbjct: 3994 SIQVKY*SRMQGTS*CNN 4047 Score = 39.6 bits (80), Expect(2) = 4e-04 Identities = 25/78 (32%), Positives = 35/78 (44%) Frame = +1 / -3 Query: 982 QNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPC 1161 QN+N + HE+ D + L C T + * L+ + + * L H LVPC Sbjct: 4202 QNDNQLLYV*YEHEKQD*LINT*LLCCQTTFSQP*EHLFQSHIGESVTT*SLLLHQLVPC 4023 Query: 1162 TLPRC*IWKQWLVF*QTM 1215 L + W WL F* +M Sbjct: 4022 ILLQYLTWILWLAF*HSM 3969 Score = 25.4 bits (49), Expect(2) = 4e-04 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +1 / -3 Query: 1249 HLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYV 1359 H LNVC L LP+L+ + + Q T *+L YV Sbjct: 3935 HQLNVCQLDSLPNLHQRNY*QEELVTY*SLVHNLLYV 3825
>LOC_Os03g56990:12003.t04968:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4122 Score = 322 bits (698), Expect = 4e-87 Identities = 128/200 (64%), Positives = 163/200 (81%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L L+QEKYA+D++++ G+ CKP TPLS +EKLS G + D+T+YR +VGALQ Sbjct: 3520 DGLVLTQEKYASDVLRRVGMSDCKPVNTPLSISEKLSSQGGALLGPNDSTQYRSIVGALQ 3699 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC +LHAPTT H+ A KRI+RY+KHT+ +GL +KS S LVSAF+ Sbjct: 3700 YLTLTRPDISFSVNKVCQYLHAPTTDHWAAVKRILRYIKHTVKLGLQINKSSSLLVSAFT 3879 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAGCLDDRRST GF +F GPNL+SWSARKQATVSRSS EA YKALANATAE++W+Q+ Sbjct: 3880 DADWAGCLDDRRSTRGFDVFVGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQT 4059 Query: 1114 MLKELGIKSSKTPCFWCDNV 1055 +L+ELG+K + WCDN+ Sbjct: 4060 LLQELGVKGPRAAKVWCDNI 4119 Score = 212 bits (458), Expect = 5e-54 Identities = 107/192 (55%), Positives = 123/192 (64%) Frame = +3 / -2 Query: 1059 LSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKN 1238 LSH L F P+S S C H+ SAVAFA+ALY AS+LDLETVACF A + RLGP Sbjct: 4115 LSHHTLAALGPFTPSS*SNVCIHIISAVAFANALYSASVLDLETVACFRALQDTRLGPTK 3936 Query: 1239 IANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACK 1418 +NP V+ LSSR PAQS ALTS E DLL RP F+VCF YL I A +*+VVGACK Sbjct: 3935 TSNPLVDLLSSRQPAQSASVNALTSKELDLLICRPSFTVCFIYLNILFTAAQ*SVVGACK 3756 Query: 1419 N*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCR 1598 *HTLFT +ISGLV+VKY APT Y V+S P D+FS +D+GV GLQ Sbjct: 3755 Y*HTLFTENDISGLVNVKYCNAPTMLRY*VLSLGPRRAPP*LDNFSEMDRGVLTGLQSLI 3576 Query: 1599 PGFFTKSVAYFS 1634 P S AYFS Sbjct: 3575 PTLLRTSEAYFS 3540 Score = 133 bits (284), Expect = 5e-30 Identities = 66/154 (42%), Positives = 88/154 (57%) Frame = +2 / -1 Query: 1052 SNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRS 1231 SNI+TP R FYT+ L L+P++F C IC CLV S N LFS P ++ S Sbjct: 4122 SNIITPYLSGSRPFYTKFLK*CLYPHNFCCCICQCLVFSFST*SRNCSLFSCTPRYKVGS 3943 Query: 1232 KKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWC 1411 K K + +SVI +CP+ I K T+K R L +*T MF+I Y C + C W Sbjct: 3942 YKNIKSSSGSSVIKTACPICISKCTNKQRTRLVNL*TKFHSMFYIPQYPFYRCPMICSWS 3763 Query: 1412 M*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 M* LT+LVY K IRSC+CQIL+ + +V S++ Sbjct: 3762 M*ILTYLVY*K*YIRSCQCQILQCSNYAAVLSAI 3661 Score = 73.5 bits (154), Expect(2) = 3e-14 Identities = 34/72 (47%), Positives = 47/72 (65%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 +VFD KT Y++ KQG+ VFTC+N+ SL S + ++ +TY E WS QV F+ C C Sbjct: 3696 AVFDIDKTGYIIFSKQGMSVFTCSNYRSLGSGKKDIEVYKTYCETWSTD*QV*FFAC*CI 3875 Query: 1298 F*FRLGRMPR*Q 1263 +* RLGR+ *Q Sbjct: 3876 Y*CRLGRLS**Q 3911 Score = 25.8 bits (50), Expect(2) = 3e-14 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -2 / +3 Query: 1208 C*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKK 1089 C KTS+ F I + +QG KC+S +++ G K+ Sbjct: 3966 CTKTSYSF*IKY*S*IQGIGKCNSRNYVDTNITSGTWCKR 4085 Score = 65.2 bits (136), Expect = 1e-09 Identities = 55/131 (41%), Positives = 64/131 (48%) Frame = -1 / +2 Query: 1476 SI*HLQDLISPLL*TRCVSFYMHQPQFTSQLPSV**DM*NIR*ILV*ISASPLLHL*VLF 1297 SI*H QD I *TR VS YM Q Q Q * +*NI * LV S +L L V Sbjct: 3698 SI*H*QDRIYHFQ*TRYVSIYMLQLQIIGQR*KGY*GI*NIL*NLVYRLTSLVLCLLVHL 3877 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+Q GQ MT+ L + D + G+ ENK F D + TRH QM Q K G Sbjct: 3878 LMQIGQAVLMTEDPLEDLMFL*DPTLYLGVHENKLQFLDQVLKLNTRHWQMQQQKLCGYK 4057 Query: 1116 PC*RSWV*KAL 1084 R+ V*K L Sbjct: 4058 HYFRNLV*KGL 4090 Score = 56.5 bits (117), Expect = 5e-07 Identities = 30/71 (42%), Positives = 41/71 (57%) Frame = +1 / -3 Query: 1264 CHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SELWLVHVKTNTPCLQQ 1443 CH LP+L+ H Q TC*++DQ S YV + + L ++L L HV T+ PCL + Sbjct: 3910 CHQDSLPNLHQ*MH*QAKN*TC*SVDQVSQYVLYTSISFLPLPNDL*LEHVNTDIPCLLK 3731 Query: 1444 RRYQVL*VSNT 1476 Y VL +SNT Sbjct: 3730 MIYPVLSMSNT 3698
>LOC_Os12g14740:12012.t01334:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2273 Score = 309 bits (669), Expect = 4e-83 Identities = 125/187 (66%), Positives = 155/187 (82%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+Q+KYATDL++K G+ CKPT TP+S +EKLSL EGT + VD T+YR +VGALQYLTL Sbjct: 1698 LTQDKYATDLLRKSGMLDCKPTNTPMSVSEKLSLHEGTLLGDVDATQYRSVVGALQYLTL 1877 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS FSN+DW Sbjct: 1878 TRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTQLGLKIHKSDSTLVSGFSNTDW 2057 Query: 1282 AGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKE 1103 AG LDDRRSTGGFA++ G +L+SWS RKQAT+SRSS E+ YKA+ANAT E++WVQ++L E Sbjct: 2058 AGSLDDRRSTGGFAVYLGSDLVSWSTRKQATISRSSTESEYKAIANATTEIMWVQTLLAE 2237 Query: 1102 LGIKSSK 1082 LGIK+ + Sbjct: 2238 LGIKTPR 2258 Score = 225 bits (485), Expect = 9e-58 Identities = 111/185 (60%), Positives = 124/185 (67%) Frame = +3 / -2 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L + IPNS S CTH+ S VAFA ALY S+LDLE VACFL H+ R PK A PPV+ Sbjct: 2257 LGVLIPNSASKVCTHIISVVAFAIALYSDSVLDLEIVACFLVLHDTRSDPKYTAKPPVDL 2078 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSSR PAQS LE LT VE DL F P C YL+I L A++*TVVGACKN*HTL T Sbjct: 2077 LSSRLPAQSVLENPLTRVESDL*IFSPNCVHCLRYLSILLTAIQ*TVVGACKN*HTLLTE 1898 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSV 1622 K ISGLV VKY +APT LY V ST VPS ++SFS+ D GV VGLQ P F +SV Sbjct: 1897 KAISGLVRVKYCKAPTTLLY*VASTSPSKVPSCKESFSLTDIGVFVGLQSSIPDFLKRSV 1718 Query: 1623 AYFS* 1637 AY S* Sbjct: 1717 AYLS* 1703 Score = 121 bits (258), Expect = 2e-26 Identities = 72/184 (39%), Positives = 95/184 (51%) Frame = +2 / -1 Query: 1085 RAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TS 1264 R F Q GL+P+ F IC C + L GNSGLF S P* I S YCK +C*+S Sbjct: 2255 RGFNPQFSKQGLYPHYFCSSICNCFILRLCTGPGNSGLFPSTP*Y*I*S*VYCKTSC*SS 2076 Query: 1265 VI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSK 1444 VI A+CP+ IRKST+K R L + + + +S Y +N M*KLTH + + Sbjct: 2075 VIKATCPICIRKSTNKSRI*LMNFQSQLCTLLKVSKYPFNCNPMNSCRSM*KLTHFIN*E 1896 Query: 1445 GDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCC 1624 G IRS + IL+ST T + SS++ +F +R FF R C R +V C Sbjct: 1895 GYIRSSES*ILQSTNNTPILSSINISQ*STFMQRKFFTY*HRGICRLAVQHPRFPQEVSC 1716 Query: 1625 IFFL 1636 I L Sbjct: 1715 ILIL 1704 Score = 62.9 bits (131), Expect(2) = 3e-12 Identities = 37/81 (45%), Positives = 44/81 (54%) Frame = -1 / +1 Query: 1326 SPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*Q 1147 S +L L V FLIQ GQ A MT+ QQ LQY D I +HG+L N+PLFP + Q Sbjct: 2014 SQILLLLVDFLIQIGQVALMTEDQQEVLQYT*DQI*YHGVLGNRPLFPGPVQSLSIKQLQ 2193 Query: 1146 MPQLKSYGCNPC*RSWV*KAL 1084 M K G PC +W K L Sbjct: 2194 MLLQK*CGYKPCLLNWGLKPL 2256 Score = 29.9 bits (59), Expect(2) = 3e-12 Identities = 19/38 (50%), Positives = 22/38 (57%) Frame = -1 / +1 Query: 1509 LLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQPQF 1396 LL+ V VL SI* DLI P +CVSFYM + F Sbjct: 1831 LLSIGVLLVLCSI*LSLDLI*PSQLIKCVSFYMLRQLF 1944 Score = 53.8 bits (111), Expect(2) = 1e-09 Identities = 29/68 (42%), Positives = 39/68 (57%) Frame = -2 / +2 Query: 1325 VPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSK 1146 V FY+C F*+RLGR P *Q NR C+I S M *+T H FQ+ +R V K Sbjct: 2015 VRFYSC*WIF*YRLGR*P**QKINRRFCSILRIRSSIMEY*ETGHYFQVQYRV*V*SNCK 2194 Query: 1145 CHS*SHMG 1122 C+ +++G Sbjct: 2195 CYYRNNVG 2218 Score = 29.9 bits (59), Expect(2) = 1e-09 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -2 / +2 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSL 1392 C +VF+++ T*Y L V VFTC+++ SL Sbjct: 1856 CFAVFNSH*T*YSLLS**SVSVFTCSDNCSL 1948 Score = 41.4 bits (84), Expect(2) = 1e-04 Identities = 22/43 (51%), Positives = 25/43 (58%) Frame = +1 / -3 Query: 1183 WKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 WK W V * +M D + ILQ LL CH G LP+L *K H Q Sbjct: 2157 WK*WPVS*YSMILDLILSILQNLLLIFCHQGYLPNLY*KIH*Q 2029 Score = 25.4 bits (49), Expect(2) = 1e-04 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 / -3 Query: 1411 HVKTNTPCLQQRRYQVL*VSNTEEH 1485 HVKT+T +R YQV * NT +H Sbjct: 1929 HVKTDTLY*LRRLYQV**ELNTAKH 1855
>LOC_Os08g13860:12008.t01262:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 4390 Score = 271 bits (586), Expect(2) = 5e-81 Identities = 111/218 (50%), Positives = 151/218 (69%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP++++AV +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 3003 DPTEYRSLAGALQYLTLTRPELTYAVQQVCLFMHDPREPHLALIKRILRYIKGTLHIGLH 3182 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P ++A+S++DWAGC D RRST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 3183 LRTTPVNSLTAYSDADWAGCPDSRRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRA 3362 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL I + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 3363 VAHAVAECCWLRQLLSELHISLTSATVVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 3542 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F +F+ +L Sbjct: 3543 KVALGQVRVLHVPSSHQFADIMTKGLPVQLFTEFRSSL 3656 Score = 51.9 bits (107), Expect(2) = 5e-81 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = -3 / +3 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +YA DL+K+ G+ C T TP+ + KLS +G P+ Sbjct: 2862 SSDGLFLSQRQYAVDLLKRAGMSECHSTATPIDARSKLSATDGAPV 2999 Score = 102 bits (217), Expect(3) = 1e-28 Identities = 60/127 (47%), Positives = 72/127 (56%) Frame = +3 / -1 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS L+ ETV L DHE +L P+ P VER S HPAQS E A+ Sbjct: 3382 SATACATARYSASALERETVV*RLDDHETKLSPRKTQYPDVERRESGHPAQSASE*AVRE 3203 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + G +L+ RP+ SV I L +* G+C N HT TA SG V V+Y*RAP R Sbjct: 3202 LTGVVLR*RPM*SVPLI*RKILLIRAR*GSRGSCMNRHTC*TA*VSSGRVRVRY*RAPAR 3023 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 3022 LLYSVGS 3002 Score = 35.0 bits (70), Expect(3) = 1e-28 Identities = 23/62 (37%), Positives = 31/62 (50%) Frame = +2 / -3 Query: 896 *SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPET 1075 *+F IS L+ N N N S++M I N+LCS+M + I V +NIV Sbjct: 3620 *AFGHNISKLMRGRNV*NTNLSQSNLFSNEMNINFNMLCSAMMNRICSHVDSTNIVAINN 3441 Query: 1076 GS 1081 GS Sbjct: 3440 GS 3435 Score = 28.6 bits (56), Expect(3) = 1e-28 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -1 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ D+ GV V P F KS AY *ER Sbjct: 2995 GAPSVADNLDRASIGVAVE*HSDIPARFNKSTAYCR*ER 2879 Score = 52.4 bits (108), Expect(2) = 6e-06 Identities = 39/107 (36%), Positives = 52/107 (48%) Frame = -1 / +1 Query: 1215 HGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCL 1036 HG L K F L R T * MP L G + +++ + LRLP+ TML T L Sbjct: 3301 HGHLSVKLQFRVLVLRLNTEL*HMPLLSVVGYDNFFPNFIFRLLRLPLFIATMLVLST*L 3480 Query: 1035 PI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 I + EQS L+ IFI E+ L + + F F+ I LL+ K Y Sbjct: 3481 QIRFIIAEQSILKLIFISFEKRLLWDRFVFYTFLPLISLLIL*PKAY 3621 Score = 24.9 bits (48), Expect(2) = 6e-06 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = -2 / +2 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWS 1338 CSSV + * LCC GV + ++ +S S Q + + +WS Sbjct: 3032 CSSVSYSDSP*AHLCCSTGVSIHARSS*ASSCSYQKDFALY*GHTSHWS 3178 Score = 31.3 bits (62), Expect(2) = 0.17 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +2 / -3 Query: 1424 THLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 THL+ S ++R+ + +ILKST +T +F + Sbjct: 3092 THLLNSISELRASQSKILKSTSKTPIFCRI 3003 Score = 30.4 bits (60), Expect(2) = 0.17 Identities = 19/33 (57%), Positives = 20/33 (60%) Frame = +3 / -1 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFV * T A A TLS Sbjct: 3550 ATFSRTK*ISISICFVRR**TGFAVM*TALTLS 3452
>LOC_Os05g10890:12005.t00922:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5040 Score = 270 bits (584), Expect(2) = 2e-80 Identities = 111/220 (50%), Positives = 154/220 (70%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T +R L GALQYLT TRPDIS+AV +VC +H P H A KRI+ Y++ ++++GL+ Sbjct: 4375 DPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREPHLAALKRILHYIRGSVDLGLH 4554 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S + ++ +S++DWAGC D RRST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4555 IQRSSACDLAVYSDADWAGCPDTRRSTSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRA 4734 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AEV W++ +L+EL S+ +CDNV A YLS+N V H RTKH+EID HFV E Sbjct: 4735 VANAVAEVTWLRQLLQELHSPPSRATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRE 4914 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 RVA + + + + Q AD FTK L T F +F+ +LN+ Sbjct: 4915 RVAVGAVRVLHVPTTSQYADIFTKGLPTPVFTEFRSSLNV 5034 Score = 51.0 bits (105), Expect(2) = 2e-80 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 N L LSQ +Y D++++ G+ CKP TP+ +T KLS +G P+ Sbjct: 4234 NSAGLVLSQRQYCIDILERAGMADCKPCNTPVDTTAKLSSSDGPPV 4371 Score = 64.3 bits (134), Expect(3) = 2e-17 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 +S+S +H+TSA A A+A Y AS L+ ETV L DH+ +L P+ A P VER S P Sbjct: 4787 SSWSSWRSHVTSATALATARYSASALERETVCWRLEDHDTKLSPRKTA*PDVERRVSGQP 4608 Query: 1281 AQSELE 1298 AQS E Sbjct: 4607 AQSASE 4590 Score = 35.0 bits (70), Expect(3) = 2e-17 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = +3 / -2 Query: 1374 IRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 IRL A +* G+C T TA E+SG V V+Y AP R L V S Sbjct: 4514 IRLRAAR*GSRGSCM*RQTCCTA*EMSGRVKVRYCSAPARLLKSVGS 4374 Score = 28.1 bits (55), Expect(3) = 2e-17 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK*+SIS C V T L ++ A TLS Sbjct: 4922 ATRSRTK*RSISTCLVR*CCTGLEER*TALTLS 4824 Score = 38.2 bits (77), Expect = 0.17 Identities = 27/99 (27%), Positives = 42/99 (42%) Frame = -2 / +3 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHA 1110 RLGR+P + + W+ + W MV +H + RGRV +C HM A Sbjct: 4599 RLGRLP*HSSLHIWLRRLPWRQLGVMVLQAPAHGLPLQCRGRVPRRCQCGRRGHMAAPAT 4778 Query: 1109 KGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DR 993 G + + L+ QC + + Q + +A *DR Sbjct: 4779 PGATFSAVAGYTGLLRQCQCRLPLLQPGAASAYQAC*DR 4895
>LOC_Os10g38970:12010.t03138:unspliced-genomic expressed protein| Length = 8867 Score = 269 bits (581), Expect(2) = 3e-80 Identities = 111/218 (50%), Positives = 150/218 (68%) Frame = -3 / -2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP+I++AV +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 2569 DPTEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHDPREPHLALVKRILRYIKGTLHIGLH 2390 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P ++A+S++DWAGC D RRST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 2389 IGTAPVDSLTAYSDADWAGCPDSRRSTSGYCVFLGENLVSWSSKRQTTVSRSSAEAEYRA 2210 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL I + +CDNV Y++AN V H RTKHIEID HFV E Sbjct: 2209 VAHAVAECCWLRQLLLELHIPLASATIVYCDNVSTVYMTANPVHHRRTKHIEIDIHFVRE 2030 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F +F+ +L Sbjct: 2029 KVALGQVRVLHVLSSHQFADIMTKGLPVQLFTEFRSSL 1916 Score = 51.5 bits (106), Expect(2) = 3e-80 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = -3 / -2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ + KLS +G P+ Sbjct: 2704 DGLFLSQRQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPV 2573 Score = 104 bits (221), Expect(3) = 1e-27 Identities = 60/127 (47%), Positives = 69/127 (54%) Frame = +3 / +3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS LD ETV C L DHE + P+ P VER S PAQS E A+ Sbjct: 2190 SATACATARYSASALDRETVVCRLEDHETKFSPRKTQYPDVERRESGQPAQSASE*AVKE 2369 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G + RP+ V IRL +* G+C N HT TA ISG V V+Y*RAP R Sbjct: 2370 STGAVPM*RPMCRVPLM*RKIRLTRAR*GSRGSCINKHTC*TA*AISGRVRVRY*RAPAR 2549 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 2550 LLYSVGS 2570 Score = 30.4 bits (60), Expect(3) = 1e-27 Identities = 19/33 (57%), Positives = 20/33 (60%) Frame = +3 / +3 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFV * T LA TLS Sbjct: 2022 ATFSRTK*ISISICFVRR**TGLAVM*TVLTLS 2120 Score = 28.1 bits (55), Expect(3) = 1e-27 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / +3 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ +S GV VG P KS AY *ER Sbjct: 2577 GAPSVAESLHRASTGVAVG*HSDIPARRNKSTAYCR*ER 2693 Score = 39.1 bits (79), Expect(2) = 3e-04 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = +2 / +2 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P F +C C V RS +SGL P*+++ +++ P C T+ I + PV IR S Sbjct: 2180 PATFGNSMCYCTVLSFSTRSRDSGLSLGGP*DQVFTEENTIP*CGTTRIRTTRPVSIRIS 2359 Query: 1304 THKCRRGLAEI*TNI 1348 + +++ TN+ Sbjct: 2360 CQRVNWCSSDVKTNV 2404 Score = 25.8 bits (50), Expect(2) = 3e-04 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +1 / +1 Query: 925 DLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTR 1071 D+ E + V QLSL QNE SQ A F + D ++ H H + Sbjct: 1981 DVRTERVKHELVLKQLSLEQNEYQSQYASFDDDEQD*RSCRRC*HYHNK 2127
>LOC_Os05g14530:12005.t01227:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 6571 Score = 270 bits (583), Expect(2) = 6e-80 Identities = 111/218 (50%), Positives = 151/218 (69%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR LVGALQYLTLTRP++++AV +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 3821 DPTEYRSLVGALQYLTLTRPELAYAVQQVCLFMHDPREPHLALIKRILRYIKGTLHIGLH 4000 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P ++A+S++DWAGC D RST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4001 LGTTPVDSLTAYSDADWAGCPDSHRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRA 4180 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL I + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 4181 VAHAIAECCWLRQLLSELHISLTSATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHFVRE 4360 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F +F+ +L Sbjct: 4361 KVALGQVRVLHLPSSHQFADIMTKGLPVQLFTEFRSSL 4474 Score = 49.6 bits (102), Expect(2) = 6e-80 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +Y DL+K+ G+ C T TP+ + KLS +G P+ Sbjct: 3680 SSDGLFLSQRQYVVDLLKRAGMSECHSTATPVDARSKLSATDGAPV 3817 Score = 100 bits (213), Expect(3) = 2e-27 Identities = 60/127 (47%), Positives = 72/127 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA+A A+A Y AS L+ ETV L DHE +L P+ P VER S HPAQS E A+ Sbjct: 4200 SAMACATARYSASALERETVV*RLEDHETKLSPRKTQYPDVER*ESGHPAQSASE*AVRE 4021 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G + + RP+ SV I L +* G+C N HT TA SG V V+Y*RAPTR Sbjct: 4020 STGVVPR*RPM*SVPLI*RKILLIRAR*GSRGSCMNRHTC*TA*ASSGRVRVRY*RAPTR 3841 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 3840 LLYSVGS 3820 Score = 33.1 bits (66), Expect(3) = 2e-27 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +2 / -1 Query: 968 NSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 N S++M I N+LCS+M + I V +NIV GS Sbjct: 4366 NLFSNEMNINFNMLCSAMMNRICSHVDSTNIVAINNGS 4253 Score = 27.6 bits (54), Expect(3) = 2e-27 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ D+ GV V P F KS Y *ER Sbjct: 3813 GAPSVADNLDRASTGVAVE*HSDIPARFNKSTTYCR*ER 3697 Score = 32.2 bits (64), Expect(3) = 9e-07 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +2 / -1 Query: 1424 THLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 THL+ S +R+ + +ILKST++T +F + Sbjct: 3910 THLLNSVSKLRASQSKILKSTHKTPIFCRI 3821 Score = 30.9 bits (61), Expect(3) = 9e-07 Identities = 19/33 (57%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFV * T A A TLS Sbjct: 4368 ATFSRTK*ISISICFVRR**TGFAAM*TALTLS 4270 Score = 27.2 bits (53), Expect(3) = 9e-07 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P S G+C V L + N L RP*+++ +++ C I S P+ IR Sbjct: 4210 PTTLSNGMCYSSVFSLSTGTRNCSLTLRRP*DQVVAEENTIS*CGAMRIRTSSPISIRVG 4031 Query: 1304 THKCRRGLAEI*TNIQRMFHIS 1369 + +++ TN++ +I+ Sbjct: 4030 CQRVNWCSSKVKTNVKCALNIT 3965 Score = 51.5 bits (106), Expect = 2e-05 Identities = 39/107 (36%), Positives = 51/107 (47%) Frame = -1 / +3 Query: 1215 HGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCL 1036 HGLL K F R T * MP L G + +++ LRLP+ TML T L Sbjct: 4119 HGLLSVKLQFLVPVLRLNTEL*HMPLLSVVGYDNFFPNFIFHLLRLPLFIATMLVLSTWL 4298 Query: 1035 PI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMGLQKLY 895 I + EQS L+ IFI E+ L + + F F+ I LL+ K Y Sbjct: 4299 QIRFIIAEQSILKLIFISFEKRLLWDRFVFYTFLPLISLLIL*PKAY 4439
>LOC_Os08g07870:12008.t00675:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5004 Score = 268 bits (580), Expect(2) = 1e-79 Identities = 111/220 (50%), Positives = 154/220 (70%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T +R L GALQYLT TRPDIS+AV +VC +H P H A KRI+RY++ ++++GL+ Sbjct: 4339 DPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREPHLAALKRILRYIRGSVDLGLH 4518 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S + ++ +S++DWAGC D RRST G+A+F G NL+SWS+++ TVSRSS EA Y+A Sbjct: 4519 IQRSSACDLAVYSDADWAGCPDTRRSTSGYAVFLGDNLVSWSSKR*HTVSRSSAEAEYRA 4698 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AEV W++ +L+EL S+ +CDNV A YLS+N V H RTKH+EID HFV E Sbjct: 4699 VANAVAEVTWLRQLLQELHSPPSRATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRE 4878 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 RVA + + + + Q AD FTK L T F +F+ +LN+ Sbjct: 4879 RVAVGAVRVLHVPTTSQYADIFTKGLPTPVFTEFRSSLNV 4998 Score = 50.1 bits (103), Expect(2) = 1e-79 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 N L LSQ +Y D++++ G+ CKP TP+ +T KLS +G P+ Sbjct: 4198 NLAGLVLSQRQYCIDILERAGMADCKPCNTPVDTTAKLSSSDGPPV 4335 Score = 63.4 bits (132), Expect(3) = 4e-17 Identities = 32/66 (48%), Positives = 41/66 (62%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 +S+S +H+TSA A A+A Y AS L+ ETV L DH+ +L P+ A P VER S P Sbjct: 4751 SSWSSWRSHVTSATALATARYSASALERETVC*RLEDHDTKLSPRKTA*PDVERRVSGQP 4572 Query: 1281 AQSELE 1298 AQS E Sbjct: 4571 AQSASE 4554 Score = 35.0 bits (70), Expect(3) = 4e-17 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = +3 / -2 Query: 1374 IRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 IRL A +* G+C T TA E+SG V V+Y AP R L V S Sbjct: 4478 IRLRAAR*GSRGSCM*RQTCCTA*EMSGRVKVRYCSAPARLLKSVGS 4338 Score = 28.1 bits (55), Expect(3) = 4e-17 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK*+SIS C V T L ++ A TLS Sbjct: 4886 ATRSRTK*RSISTCLVR*CCTGLEER*TALTLS 4788 Score = 38.6 bits (78), Expect(2) = 0.059 Identities = 27/99 (27%), Positives = 42/99 (42%) Frame = -2 / +3 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHA 1110 RLGR+P + + W+ + W MV +H + RGRV +C HM A Sbjct: 4563 RLGRLP*HSSLHIWLRRLPWRQLGVMVLQALAHGLPLQCRGRVPRRCQCSRRGHMAAPAT 4742 Query: 1109 KGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DR 993 G + + L+ QC + + Q + +A *DR Sbjct: 4743 PGATFSAVAGYTGLLRQCQCRLPLLQPGAASAYQAC*DR 4859 Score = 24.9 bits (48), Expect(2) = 0.059 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -2 / +3 Query: 1517 SGHY*IQMSGRCSSVFDTYKT*YLLCC 1437 SG + +Q RC++V + +LLCC Sbjct: 4335 SGSHRLQEPRRCATVPHLHPARHLLCC 4415
>LOC_Os11g30700:12011.t02672:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4810 Score = 270 bits (584), Expect(2) = 1e-79 Identities = 113/221 (51%), Positives = 151/221 (68%) Frame = -3 / +2 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 +D T YR L ALQYLT TRPDIS+ V +VC +H P H KRI+RYV+ TL++GL Sbjct: 4142 LDPTDYRSLASALQYLTFTRPDISYVVQQVCLHMHDPRDSHLATLKRILRYVRGTLDLGL 4321 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 + SPST + A+S+++WAGC D R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+ Sbjct: 4322 HIRHSPSTDLVAYSDANWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYR 4501 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A+ANA AE W++ +L EL SK +CDNV A YLS N V H RTKH+EID HFV Sbjct: 4502 AMANAVAETCWLRQLLHELHTPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVR 4681 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +RVA + + + + Q AD FTK L + F +F+ +LN+ Sbjct: 4682 DRVAVGSVRVLHVPTTSQYADIFTKGLPSSLFVEFRSSLNV 4804 Score = 48.3 bits (99), Expect(2) = 1e-79 Identities = 16/46 (34%), Positives = 31/46 (67%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +Y+ +++++ G+ CKP TP+ + KLS +G+P+ Sbjct: 4004 DSSGLLLSQRQYSIEILERAGMSDCKPCSTPVDTNAKLSSTDGSPV 4141 Score = 109 bits (232), Expect = 7e-23 Identities = 74/176 (42%), Positives = 91/176 (51%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK +SIS C V T L ++ A TLS + LE + +S + + SA A Sbjct: 4692 ATRSRTKCRSISTCLVR*C*TGLVER*TALTLSQYTKVALEGGVCSSCNNWRSQQVSATA 4513 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A ALY AS L+ +TV L D E RL P+N A P V+ S PAQ E A SVEG+ Sbjct: 4512 LAIALYSASALERDTVC*RLEDQETRLSPRNTA*PEVDLRVSGQPAQLASE*ATRSVEGE 4333 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 P SV TY IRL + +G+C T T EISG V+VKY* A R Sbjct: 4332 CRMCSPRSSVPRTYRRIRLRVARCESLGSCMWRQTC*TT*EISGRVNVKY*SALAR 4165 Score = 43.7 bits (89), Expect(2) = 8e-05 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -2 / +1 Query: 1505 *IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQ 1326 *+ G C+SV D + Y LCC G+ + + QAY +C W+ Sbjct: 4153 *LSQPG*CTSVLDIHSARYFLCCSAGLSPHA*SQRFASRYSQAYPSVCPRNT*PWTTHSA 4332 Query: 1325 VPFYTCECFF*FRLGRMP 1272 + F F* LGR+P Sbjct: 4333 LSFD*PSGLF*C*LGRLP 4386 Score = 23.5 bits (45), Expect(2) = 8e-05 Identities = 8/19 (42%), Positives = 11/19 (57%) Frame = -2 / +1 Query: 1199 TSHCFQI*HRGRVQGTSKC 1143 ++HC * R VQG +C Sbjct: 4459 SAHCVSF*RRSGVQGYGQC 4515
>LOC_Os06g41410:12006.t03833:unspliced-genomic expressed protein| Length = 10355 Score = 295 bits (639), Expect = 5e-79 Identities = 122/267 (45%), Positives = 176/267 (65%) Frame = -3 / -2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 + + L LSQ +YA +L+++ G+ C PT TP+ + KLS +G + D ++YR L GA Sbjct: 5641 SSDGLFLSQRQYAVELLQRAGMAECHPTSTPVDTHAKLSATDGDLLSEKDASEYRSLAGA 5462 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPD+++AV +VC F+HAP H KRI+R+V+ TL+ GL+ ++A Sbjct: 5461 LQYLTLTRPDLAYAVQQVCLFMHAPREPHRALIKRILRFVQGTLSSGLHIGTGSVDKLTA 5282 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 +S++DWAGC D RRST GF ++ G L+SWS+++Q TVSRSS EA Y+A+A+ AE W+ Sbjct: 5281 YSDADWAGCPDSRRSTSGFCVYLGDTLVSWSSKRQTTVSRSSAEAEYRAVAHVVAECCWL 5102 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 + +L+EL I+ +CDNV A Y++ N V H RTKHIEID HFV ++VA + + Sbjct: 5101 RQLLQELHIQLPSATVVFCDNVSAVYMTTNPVHHKRTKHIEIDIHFVRDKVALGEIRVLH 4922 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNL 860 + S Q AD TK L T F +F+ +L Sbjct: 4921 VPSSHQFADIMTKGLPTALFREFRSSL 4841 Score = 130 bits (278), Expect = 3e-29 Identities = 88/226 (38%), Positives = 113/226 (50%) Frame = +3 / +3 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 ATLS TK* SISMCFV T L A TLS + ++ +S+S + SA Sbjct: 4947 ATLSRTK*MSISMCFVRLWWTGLVVM*TALTLSQKTTVAEGSWMWSSWSNCRSQQHSATT 5126 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+A Y AS L+ +TV L D E R+ P+ P V+R S HPAQS E A++ Sbjct: 5127 *ATARYSASALERDTVVWRLEDQETRVSPR*TQKPEVDRRESGHPAQSASE*AVSLSTDP 5306 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYL 1505 + RP V +T +RL + +* GAC HT TA SG VSV+Y RAP + LY Sbjct: 5307 VPM*RPEERVPWTKRRMRLMSAR*GSRGACMKRHTC*TAYARSGRVSVRYWRAPAKLLYS 5486 Query: 1506 VVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S PS+ DS + + GV VG P + S AY ER Sbjct: 5487 DASFSDSRSPSVADSLA*VSTGVDVG*HSAMPARWRSSTAYCRWER 5624 Score = 36.8 bits (74), Expect = 0.45 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -2 / -1 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQG 1155 +C * LGRMPR T + W+ + S F+V H + RGRV G Sbjct: 5288 DCLL*C*LGRMPRLSTIHLWLLRLSRRHSGFLVFQAPDHGVPLQRRGRVSG 5136
>LOC_Os01g53170:12001.t04739:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2367 Score = 268 bits (579), Expect(2) = 1e-78 Identities = 108/218 (49%), Positives = 151/218 (69%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D + YR + GALQYLTLTRPD+++AV +VC F+H P H KRI+RYVK +L+IGL+ Sbjct: 1636 DPSAYRSIAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSIGLH 1815 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 P ++A+S++DWAGC + RRST G+ ++ G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 1816 IGSGPIQSLTAYSDADWAGCPNSRRSTSGYCVYLGDNLVSWSSKRQTTVSRSSAEAEYRA 1995 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L+EL + + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 1996 VAHAVAECCWLRQLLQELHVPIASATIVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 2175 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + ++ S Q AD TK L Q F DF+ +L Sbjct: 2176 KVALGQVRVLYVPSSHQFADIMTKGLPVQLFTDFRSSL 2289 Score = 47.3 bits (97), Expect(2) = 1e-78 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C T TP+ + KLS +G P+ Sbjct: 1501 DGLFLSQRQYAVDLLQRAGMAECHSTSTPVDTHAKLSATDGLPV 1632 Score = 87.2 bits (184), Expect(2) = 7e-20 Identities = 53/123 (43%), Positives = 65/123 (52%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A+A+A Y AS L+ ETV L D E +L P+ P VER PAQS E A+ Sbjct: 2015 SATAWATARYSASALERETVVWRLEDQETKLSPR*TQ*PDVERRELGQPAQSASEYAVRD 1836 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G +RP+ + FTY IRL +* G+C T TA SG VSV+Y RAP Sbjct: 1835 *IGPEPMWRPMERLPFTYRRIRLTKAR*GSRGSCMKRQTC*TAYAKSGRVSVRYCRAPAI 1656 Query: 1494 HLY 1502 LY Sbjct: 1655 LLY 1647 Score = 31.3 bits (62), Expect(2) = 7e-20 Identities = 19/33 (57%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK SIS+CFV * T LA A TLS Sbjct: 2183 ATFSRTKWMSISICFVRR*CTGLAVM*TALTLS 2085 Score = 38.6 bits (78), Expect = 0.13 Identities = 31/98 (31%), Positives = 45/98 (45%) Frame = -1 / +2 Query: 1239 YFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVT 1060 + L+ I F G K L P RQ T MP + GC C ++++ + LRL S VT Sbjct: 1910 FTLETIWFLGPPNAKLLSPVPVLRQSTVRLPMPSPSAAGCGNCSKNFMSRLLRLLSSIVT 2089 Query: 1059 MLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTF 946 M T PI ++ +S LR IL + + + F Sbjct: 2090 M*VLFT*QPIQCIIVGRSILRSTSILSVKRWLWDKYVF 2203
>LOC_Os12g16430:12012.t01496:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4018 Score = 293 bits (635), Expect = 2e-78 Identities = 121/172 (70%), Positives = 143/172 (83%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA D++K+ + CK TPLS +EKLS EG P+ D+T+YR LVGALQ Sbjct: 3476 NGIVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQ 3655 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPD+SF+VNKVC +LHAPTT H+ AAKRI+RY+KHT+ +GL SKS S LVSAFS Sbjct: 3656 YLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFS 3835 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANAT 1139 ++DWAGCLDDRRSTGGFA+F GPNL+SWSARKQATVSRSS EA YKALANAT Sbjct: 3836 DADWAGCLDDRRSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANAT 3991 Score = 199 bits (429), Expect = 5e-50 Identities = 98/165 (59%), Positives = 111/165 (67%) Frame = +3 / -2 Query: 1140 VAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVE 1319 VA A ALY AS+LDL+TVAC A H+ RLGP A PPVER SS+HPAQS EKALT E Sbjct: 3990 VALAKALYSASVLDLDTVACLRALHDTRLGPIKTAKPPVERRSSKHPAQSASEKALTRRE 3811 Query: 1320 GDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHL 1499 DLL F P +VCF YL I LAA + VVGACK HTLFT + SGLV VKY APTR L Sbjct: 3810 LDLLIFSPSLTVCFKYLKILLAAAQCLVVGACKYWHTLFTENDKSGLVRVKYCNAPTRLL 3631 Query: 1500 YLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS 1634 YLV+S+ G+PS +FS +DKGV LQ F S+AYFS Sbjct: 3630 YLVLSSGPRGLPS*ALNFSEIDKGVLTALQSLIFTLFNTSIAYFS 3496 Score = 100 bits (214), Expect = 2e-20 Identities = 65/160 (40%), Positives = 82/160 (51%) Frame = +2 / -1 Query: 1157 LVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI 1336 L+ CL RSG S L + P*++IR K K T +I SCP+ IR+ST+K R LA Sbjct: 3973 LIFCLCTRSGYSSLLACTP*HKIRPYKNSKTPSRTPIIQTSCPICIRESTYKKRIRLANF 3794 Query: 1337 *TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH 1516 * + MF IS L + GWCM L HL+Y K I S + QIL+ + QTSV +V Sbjct: 3793 *PKLNCMFQISQNPLSRRPMLSGWCMQILAHLIY*K**IWSSQSQILQCSNQTSVPGTVF 3614 Query: 1517 *IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 R +F *FF R RS FT + IF L Sbjct: 3613 WSKRITFMST*FF*NRQRSIDCFTVTHIHSL*HIHSIFLL 3494 Score = 98.2 bits (208), Expect = 1e-19 Identities = 53/123 (43%), Positives = 71/123 (57%) Frame = -2 / +1 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y +Q SG +VFD+ T +++ K GV VF CTNH +L +I ETY+ W+K Sbjct: 3622 YQVQKSGWSIAVFDSD*TRFIIFSK*GVPVFACTNH*ALGGG*EDFEIFETYS*AWAKN* 3801 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 QV F +C+CF * RLGRM * F C + *S M C + S+C QI*+RGR+ G Sbjct: 3802 QV*FSSCKCFL*CRLGRMFG*SAFYWGFCCFYRA*SCVMECTQASYCIQI*YRGRI*GFG 3981 Query: 1148 KCH 1140 C+ Sbjct: 3982 *CY 3990 Score = 51.9 bits (107), Expect(2) = 3e-11 Identities = 34/72 (47%), Positives = 42/72 (58%) Frame = -1 / +3 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+*NI+ L * AS +L L*VL L+Q GQD M V L + LI HG+ +K Sbjct: 3759 *DI*NIQLSLG*KLASLILFL*VLSLMQIGQDVWMIGVLLGVLLFL*GLILCHGVHASKL 3938 Query: 1191 LFPDLASRQGTR 1156 L+PDL RQ R Sbjct: 3939 LYPDLVQRQNIR 3974 Score = 37.3 bits (75), Expect(2) = 3e-11 Identities = 26/57 (45%), Positives = 29/57 (50%) Frame = -1 / +3 Query: 1572 LLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HLQDLISPLL*TRCVSFYMHQP 1402 LL L QKN + K L Q T+ T+VW SI* D I * RC S MHQP Sbjct: 3558 LLCLFQKN*VLMKVILLDQKTVPGTEVWLEHCSI*L*LDQIYHFQ*IRCASICMHQP 3728 Score = 40.5 bits (82), Expect(2) = 3e-08 Identities = 30/71 (42%), Positives = 35/71 (49%) Frame = +1 / -3 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*N 1335 P LP *IW Q L +M D* Q N H ILP+L+ +KH Q TC* Sbjct: 3974 PYILPLY*IWIQ*LACVHSMTQD*AL*KQQNPQ*NADHPNILPNLHQRKHLQEEN*TC*F 3795 Query: 1336 LDQYSAYVSHI 1368 L Q YVS+I Sbjct: 3794 LAQA*LYVSNI 3762 Score = 38.6 bits (78), Expect(2) = 3e-08 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = +1 / -3 Query: 1402 WLVHVKTNTPCLQQRRYQVL*VSNTEEHLPDICI**CPLNL*VFLP*EIVFLY*IKEWVW 1581 WLVH T TP L + V SNT PD C C L +L ++FL * KE+ Sbjct: 3728 WLVHANTGTPYLLKMINLV*SESNTAMLQPDFCTWYCLLVQEDYLHEHLIFLK*TKEY*L 3549 Query: 1582 VYN 1590 +Y+ Sbjct: 3548 LYS 3540
>LOC_Os02g04070:12002.t00306:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4401 Score = 293 bits (634), Expect = 3e-78 Identities = 122/267 (45%), Positives = 175/267 (65%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGA 1481 + + L LSQ +YA +L+++ G+ C PT TP+ + KLS + + D ++YR L GA Sbjct: 3559 SSDGLFLSQRQYAVELLQRAGMAECHPTSTPVDTHAKLSATDWDLLSEKDASEYRSLAGA 3738 Query: 1480 LQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSA 1301 LQYLTLTRPD+++AV +VC F+HAP H KRI+R+V+ TL+ GL+ ++A Sbjct: 3739 LQYLTLTRPDLAYAVQQVCLFMHAPREPHRALIKRILRFVQGTLSSGLHIGTGSVDKLTA 3918 Query: 1300 FSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWV 1121 +S++DWAGC D RRST GF ++ G L+SWS+++Q TVSRSS EA Y+A+A+ AE W+ Sbjct: 3919 YSDADWAGCPDSRRSTSGFCVYLGDTLVSWSSKRQTTVSRSSAEAEYRAVAHVVAECCWL 4098 Query: 1120 QSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRF 941 + +L+EL I+ +CDNV A Y++ N V H RTKHIEID HFV E+VA + + Sbjct: 4099 RQLLQELHIQLPSATVVFCDNVSAVYMTTNPVHHKRTKHIEIDIHFVREKVALGEIRVLH 4278 Query: 940 IHSKDQVADGFTKALRTQSFEDFKHNL 860 + S Q AD TK L T F +F+ +L Sbjct: 4279 VPSSHQFADIMTKGLPTALFREFRSSL 4359 Score = 124 bits (266), Expect = 1e-27 Identities = 86/226 (38%), Positives = 111/226 (49%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK* SISMCFV T L A TLS + ++ +S+S + SA Sbjct: 4253 ATFSRTK*MSISMCFVRLWWTGLVVM*TALTLSQKTTVAEGSWMWSSWSNCRSQQHSATT 4074 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+A Y AS L+ +TV L D E R+ P+ P V+R S HPAQS E A++ Sbjct: 4073 *ATARYSASALERDTVVWRLEDQETRVSPR*TQKPEVDRRESGHPAQSASE*AVSLSTDP 3894 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYL 1505 + RP V +T +RL + +* GAC HT TA SG VSV+Y RAP + LY Sbjct: 3893 VPM*RPEERVPWTKRRMRLMSAR*GSRGACMKRHTC*TAYARSGRVSVRYWRAPAKLLYS 3714 Query: 1506 VVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S S+ DS + + GV VG P + S AY ER Sbjct: 3713 DASFSDSRSQSVADSLA*VSTGVDVG*HSAMPARWRSSTAYCRWER 3576
>LOC_Os07g48229:12007.t04455:unspliced-genomic vacuolar sorting receptor 1 precursor, putative, expressed| Length = 10235 Score = 260 bits (563), Expect(2) = 5e-78 Identities = 108/215 (50%), Positives = 145/215 (67%) Frame = -3 / -2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP++++AV +VC F+H P H RI+RYVK +L+ GL+ Sbjct: 4132 DPTEYRSLAGALQYLTLTRPELAYAVQQVCLFMHDPREPHLALVTRILRYVKGSLSAGLH 3953 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 P ++A+S++DWAGC D RRST G+ +F G NLISWS+++Q TVSRSS EA Y+A Sbjct: 3952 IGTGPVKSLTAYSDADWAGCPDSRRSTSGYCVFLGDNLISWSSKRQTTVSRSSAEAEYRA 3773 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L+EL + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 3772 VAHAVAECCWLRQLLQELHAPIASATVVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 3593 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFK 869 +VA + + + S Q D TK L Q F DF+ Sbjct: 3592 KVALGQVCVLHVPSSHQFVDIMTKGLPVQLFTDFR 3488 Score = 52.4 bits (108), Expect(2) = 5e-78 Identities = 19/46 (41%), Positives = 30/46 (65%) Frame = -3 / -2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +YA DL+++ G+ C PT TP+ + KLS +G P+ Sbjct: 4273 SSDGLFLSQRQYAIDLLQRAGMSECHPTATPVDARAKLSASDGAPV 4136 Score = 84.5 bits (178), Expect(2) = 3e-20 Identities = 51/127 (40%), Positives = 66/127 (51%) Frame = +3 / +3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A+A+A Y AS LD ETV L D E+RL P+ P VER S PAQS E A+ Sbjct: 3753 SATAWATARYSASALDRETVV*RLEDQEIRLSPRKTQ*PEVERRESGQPAQSASE*AVRD 3932 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + G + + P T +R+ + G+C T +TA SG V V+Y +AP R Sbjct: 3933 LTGPVPMWSPAEREPLT*RRMRVTKARWGSRGSCMKRQTCWTA*ASSGRVRVRYCKAPAR 4112 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 4113 LLYSVGS 4133 Score = 35.4 bits (71), Expect(2) = 3e-20 Identities = 21/33 (63%), Positives = 21/33 (63%) Frame = +3 / +3 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SISMCFV * T LA A TLS Sbjct: 3585 ATFSRTK*MSISMCFVRR*CTGLAVM*TALTLS 3683
>LOC_Os07g27000:12007.t02395:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4891 Score = 268 bits (579), Expect(2) = 1e-77 Identities = 113/220 (51%), Positives = 152/220 (69%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T +R L GALQYLT TRPDI++AV +V +H P H TA KRI+RYV TL+ GL+ Sbjct: 4196 DPTDFRSLAGALQYLTFTRPDIAYAVQQVSLHMHDPREPHLTALKRILRYVWGTLDYGLH 4375 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 KSP T + +S++DWAGC D R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4376 IQKSPVTDLVVYSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRA 4555 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L+EL +K +CDNV A YLS+NLV H RTKH+EID HFV + Sbjct: 4556 VANAVAEATWLRQLLQELHTPLAKATVVYCDNVSAVYLSSNLV*HQRTKHVEIDLHFVRD 4735 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK L T F +F+ +L + Sbjct: 4736 KVAVGAIRVLHVPTSSQYADIFTKGLPTPVFLEFRFSLTV 4855 Score = 44.1 bits (90), Expect(2) = 1e-77 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 ++L L Q +Y+ D++ + G+ CKP TP+ ++ K+S G P+ Sbjct: 4061 SSLLLHQRQYSLDILDRVGMADCKPCSTPVDTSSKMSATVGAPV 4192 Score = 89.0 bits (188), Expect(2) = 1e-20 Identities = 54/124 (43%), Positives = 67/124 (54%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + + SA AFA+A Y AS L+ +TV L D E RL P+ A P V+ S PAQS E Sbjct: 4587 SQVASATAFATARYSASALERDTVFWRLEDQETRLSPRKTA*PEVDLRVSGQPAQSASE* 4408 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 SV GD P +V TY I L+AV+* G+C T TA ISG V V+Y R Sbjct: 4407 TTRSVTGDF*MCNP*SNVPQTYRNILLSAVR*GSRGSCM*RDTC*TA*AISGRVKVRYCR 4228 Query: 1482 APTR 1493 AP + Sbjct: 4227 APAK 4216 Score = 32.2 bits (64), Expect(2) = 1e-20 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 ATLS TK +SIS C V TRL ++ A TLS Sbjct: 4743 ATLSRTKCRSISTCLVR*CYTRLEER*TALTLS 4645 Score = 39.6 bits (80), Expect = 0.067 Identities = 32/128 (25%), Positives = 48/128 (37%) Frame = -2 / +1 Query: 1487 RCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTC 1308 RC +V + T Y LC V + +S H Q +C + W +V + Sbjct: 4222 RCPTVPHLHATRYCLCRSASVSSHARPS*ASSHCAQEDIAVCLGHVGLWIAHSEVSCH*P 4401 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SH 1128 C * LG + N +C+ * F+V H + RGRV + KC S+ Sbjct: 4402 SCLL*C*LGWLS*HSQVNLRLCSFSR**PCFLVLQAPEHGVPLQCRGRVSCSGKCCRRSY 4581 Query: 1127 MGAIHAKG 1104 + G Sbjct: 4582 LATTTTSG 4605 Score = 35.0 bits (70), Expect = 1.6 Identities = 31/121 (25%), Positives = 52/121 (42%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P F IC C + L +G+ L P N++ ++K C * + + + P+ IR Sbjct: 4585 PGSFGDSICHCTILGLCTGAGHRVLALGGPRNKVITEKNCITGG*LASVRTASPISIRVD 4406 Query: 1304 THKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKS 1483 R L + + IQR +I Y L E+ + HL+ +I S + ++L Sbjct: 4405 N*VSDRRLLNVQSIIQRAPNIPQYPLERSEMRLTRVVHVKRHLLNGISNIWSREGEVL*G 4226 Query: 1484 T 1486 T Sbjct: 4225 T 4223
>LOC_Os06g14920:12006.t01366:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3268 Score = 230 bits (497), Expect(3) = 2e-77 Identities = 97/153 (63%), Positives = 121/153 (79%) Frame = -3 / +1 Query: 1270 DDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIK 1091 DDRRSTGGFAI+ G NL+S +A+KQATVSR S EA YKALANAT E++WVQ++L+EL I Sbjct: 1459 DDRRSTGGFAIYLGDNLVSLNAKKQATVSRYSTEAEYKALANATTEIMWVQTLLQELHIS 1638 Query: 1090 SSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADG 911 S T WCDN+GA YLS N VFHARTKHIE+D+HFV ERVA KLL + ++ ++DQVA Sbjct: 1639 SPSTAHLWCDNMGARYLSFNPVFHARTKHIEVDYHFVRERVAQKLLQVDYVSTRDQVAYS 1818 Query: 910 FTKALRTQSFEDFKHNLNLIKL*LRKGVKQAGS 812 FTKA+ + E+F++NLNL KL LR+GV+ GS Sbjct: 1819 FTKAISVKQLENFRYNLNLGKLGLREGVR*YGS 1917 Score = 56.5 bits (117), Expect(3) = 2e-77 Identities = 20/30 (66%), Positives = 27/30 (90%) Frame = -3 / +2 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTA 1385 YLTLTRPDI+++VNK C FLH+PTT+H+ + Sbjct: 1247 YLTLTRPDIAYSVNKECQFLHSPTTLHWAS 1336 Score = 53.8 bits (111), Expect(3) = 2e-77 Identities = 23/50 (46%), Positives = 32/50 (64%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTT 1505 N + L+Q KY +DL+K+ G+ CK TPLS +EKL+ EGT + D T Sbjct: 1069 NGILLTQ*KYISDLLKRTGMSDCKSVNTPLSPSEKLTANEGTVLGVNDAT 1218 Score = 129 bits (276), Expect(5) = 1e-45 Identities = 68/125 (54%), Positives = 80/125 (64%) Frame = +3 / -3 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQG 1079 A V AT*S KS ATLS TK S S+C VLA*KT L D+Y+AP LSH K Sbjct: 1829 ALVKLYAT*SLVET*STCKSFCATLSRTKW*STSICLVLA*KTGLKDRYLAPILSHHKCA 1650 Query: 1080 VLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVE 1259 V L + NS CTH+ S VA A+ALY AS+L L+TVACFLA + +L PK IA PPV+ Sbjct: 1649 VDGLLMCNSCKSVCTHIISVVALANALYSASVLYLDTVACFLAFKDTKLSPKYIAKPPVD 1470 Query: 1260 RLSSR 1274 LSS+ Sbjct: 1469 LLSSK 1455 Score = 43.7 bits (89), Expect(5) = 1e-45 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = +3 / -2 Query: 1401 VVGACKN*HTLFTAKEISGLVSVKY 1475 VVG CKN*H+LFT ISGLV VKY Sbjct: 1320 VVGECKN*HSLFTE*AISGLVRVKY 1246 Score = 36.3 bits (73), Expect(5) = 1e-45 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = +3 / -3 Query: 1530 VPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 VPS+ +FS+ DKGV LQ P F+KS YF Sbjct: 1193 VPSLAVNFSLGDKGVLTDLQSLMPVLFSKSEIYF 1092 Score = 25.8 bits (50), Expect(5) = 1e-45 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +3 / -1 Query: 1272 RHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK 1394 R PAQ E ALT+ + D P C YL I L A + Sbjct: 1456 RQPAQFASE*ALTNNDLD*HILSPRLVHCLKYLKILLTAAR 1334 Score = 23.5 bits (45), Expect(5) = 1e-45 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 / -1 Query: 814 NQLV*HPSLITTLSS*DYV*S 876 N ++*HP I T S*D +*+ Sbjct: 1915 NHII*HPPSIPTFPS*DCI*N 1853 Score = 56.1 bits (116), Expect(4) = 8e-26 Identities = 25/56 (44%), Positives = 34/56 (60%) Frame = -3 / +3 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFG 1229 H A KRI+RY K ++GL S S LVSA+S+++WAGCL ++ F FG Sbjct: 1332 HRAAVKRILRYFKQCTSLGLKIC*SKSLLVSAYSDANWAGCL**QKVYWWFCYIFG 1499 Score = 56.1 bits (116), Expect(4) = 8e-26 Identities = 37/109 (33%), Positives = 53/109 (48%) Frame = -2 / +3 Query: 1250 WVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLF 1071 W C IF * C*+TS+ I + RV S+C++ ++GA G+ +K S F Sbjct: 1479 WFCYIFGG*FSIFEC*ETSYSI*IQY*SRV*SISQCYNRDYVGANTLTGITHK*SVYSTF 1658 Query: 1070 LV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRS 924 +V* S + + S SC*N + FC RES T + +KRS Sbjct: 1659 MV**YGSKVSIF*PSFSC*N*TYRS*LPFCARESGTKTFAGRLCFYKRS 1805 Score = 35.0 bits (70), Expect(4) = 8e-26 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 / +1 Query: 1475 VFDTYKT*YLLCCKQGVLVFTCTNHSSL 1392 VF++ KT Y L CK G+ VFT ++HS+L Sbjct: 1246 VFNSDKTRYCLFCK*GMSVFTFSDHSTL 1329 Score = 26.3 bits (51), Expect(4) = 8e-26 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -2 / +3 Query: 863 SQLDKVVIKEGC*TSWF 813 SQL KV I+ GC* WF Sbjct: 1866 SQLGKVGIEGGC*IIWF 1916 Score = 99.1 bits (210), Expect(2) = 9e-21 Identities = 56/131 (42%), Positives = 73/131 (55%) Frame = +2 / -2 Query: 815 TSLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKI 994 T L NTLP SQL QVEI+ ++F SF K I LI N +Q+F+C+SLSHKM I Sbjct: 1914 TILSNTLPQSQLSQVEIVSKIF*LFNRNSFSKTICYLISCRNIIYLQKFLCHSLSHKMVI 1735 Query: 995 YLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLD 1174 ++ SSMK+ + R + S+I+TP R Y L* LHP++ C I *C + C Sbjct: 1734 NFDMFSSSMKNWVKR*IPCSHIITP*MCCRRTTYV*FL*ECLHPHNLCCSIG*CFILCFS 1555 Query: 1175 ARSGNSGLFSS 1207 S LF S Sbjct: 1554 TVSRYCSLFLS 1522 Score = 28.1 bits (55), Expect(2) = 9e-21 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +2 / -1 Query: 1376 TLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTY 1489 T C + G M*KLT L+Y +I SC+ I Y Sbjct: 1345 TAARCPM*SGRRM*KLTFLIYRISNIWSCQS*IQNPNY 1232 Score = 71.6 bits (150), Expect = 1e-11 Identities = 53/152 (34%), Positives = 77/152 (50%) Frame = -1 / +2 Query: 1269 MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*K 1090 MT+ V L Y +I + +L NK + D +Q +H* M Q + GC R++ * Sbjct: 1460 MTEGLLVVLLYIWGII*YL*MLRNKLQYLDTVLKQSIKH*PMLQQRLCGCKHSYRNYT*V 1639 Query: 1089 ALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLMG 910 + GV + E L FMLE + + I ILCERE N +F+Q+I+ + Sbjct: 1640 VRLQHIYGVIIWEQGIYLLTQFFMLELNISKLITILCEREWHKNFCR*IMFLQEIR*HIV 1819 Query: 909 LQKLYVHKVLKTSNIIST**SCD*GRVLNKLV 814 L KL++ K + IST S D*GRVL+ +V Sbjct: 1820 LLKLFLLNS*KILDTISTWESWD*GRVLDNMV 1915 Score = 38.6 bits (78), Expect = 0.13 Identities = 26/71 (36%), Positives = 36/71 (50%) Frame = +1 / -1 Query: 955 RVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*L 1134 +V++ LSL QN N + F*HE+L + L + HT N +L P+ AP * Sbjct: 1774 KVFVPLSLAQNGNQLRYV*F*HEKLG*KIDTLLPYYHTINVL*TDYLCVIPVRVFAPT*S 1595 Query: 1135 QLWHLLVPCTL 1167 L H L+ TL Sbjct: 1594 LL*HWLMLYTL 1562
>LOC_Os02g29510:12002.t02644:unspliced-genomic non-imprinted in Prader-Willi/Angelman syndrome region protein 1,| putative, expressed Length = 11896 Score = 267 bits (577), Expect(2) = 2e-77 Identities = 109/218 (50%), Positives = 149/218 (68%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR + GALQYLTLTRPD+++AV +VC F+H P H KRI+RYVK +L+ GL+ Sbjct: 6397 DPSEYRSIAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSTGLH 6576 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 P ++A+S++DWAGC D RRST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 6577 IGSGPIQSLTAYSDADWAGCPDSRRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRA 6756 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL + + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 6757 VAHAVAECCWLRQLLLELHVPIASATIVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 6936 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F DF+ +L Sbjct: 6937 KVALGQVRVLHVPSSHQFADIMTKGLPVQLFTDFRSSL 7050 Score = 44.1 bits (90), Expect(2) = 2e-77 Identities = 18/42 (42%), Positives = 25/42 (59%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ YA DL+ + G+ C T TP+ + KLS +G P+ Sbjct: 6268 LFLSQR*YAVDLLHRAGMAECHSTSTPVDTRAKLSATDGLPV 6393 Score = 90.4 bits (191), Expect(2) = 3e-20 Identities = 54/123 (43%), Positives = 65/123 (52%) Frame = +3 / -3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS L+ ETV L D E RL P+ P VER S PAQS E A+ Sbjct: 6776 SATA*ATARYSASALERETVVWRLEDQETRLSPRKTQ*PDVERRESGQPAQSASEYAVRD 6597 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G +RP+ + FTY IRL +* G+C T TA SG V+V+Y RAP Sbjct: 6596 *IGPEPMWRPVERLPFTYRRIRLTKAR*GSRGSCMKRQTC*TA*AKSGRVNVRYCRAPAM 6417 Query: 1494 HLY 1502 LY Sbjct: 6416 LLY 6408 Score = 29.5 bits (58), Expect(2) = 3e-20 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / -3 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK SIS+CFV * T A A TLS Sbjct: 6944 ATFSRTKWMSISICFVRR*CTGFAVM*TALTLS 6846
>LOC_Os12g24220:12012.t02151:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5083 Score = 269 bits (582), Expect(2) = 3e-77 Identities = 112/220 (50%), Positives = 153/220 (69%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDIS+AV +VC +H P VH A KRI+RYV+ T+++GL+ Sbjct: 4388 DPTDYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREVHLAALKRILRYVRGTIDLGLH 4567 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S +T + S++DWAGC D R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4568 IQRSQATDLVVCSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRA 4747 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL SK +CDNV A YLS+N V H RTKH++ID HFV + Sbjct: 4748 VANAVAEASWLRQLLHELHSPPSKATLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVRD 4927 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK L + F +F+ +LN+ Sbjct: 4928 KVALGAVRVLHVPTSSQYADIFTKGLPSPVFVEFRSSLNV 5047 Score = 41.4 bits (84), Expect(2) = 3e-77 Identities = 15/42 (35%), Positives = 26/42 (61%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L L Q +Y+ D++++PG+ CKP T + + KLS + P+ Sbjct: 4259 LLLHQRQYSLDILERPGMTDCKPCATLVDTCAKLSSTDAPPV 4384 Score = 101 bits (215), Expect(2) = 1e-23 Identities = 57/122 (46%), Positives = 70/122 (57%) Frame = +3 / -2 Query: 1128 MTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKAL 1307 + SA AFA+A Y AS LD ETV L DH+ RL P+ A P V+ S PAQS E+ Sbjct: 4773 LASATAFATARYSASALDRETVFWRLDDHDTRLSPRKTA*PDVDLRVSGQPAQSASEQTT 4594 Query: 1308 TSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAP 1487 SV + +RP V TY I L A + T G+C HT +TA E+SGLV V+Y* AP Sbjct: 4593 RSVA*ER*IWRPRSIVPRTYRKILLRAARWTSRGSCMCKHTCWTAYEMSGLVKVRY*SAP 4414 Query: 1488 TR 1493 R Sbjct: 4413 AR 4408 Score = 29.5 bits (58), Expect(2) = 1e-23 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLE 1088 ATLS TK +SI CFV T L ++ A TLS + L+ Sbjct: 4935 ATLSRTKCRSILTCFVR*CCTGLEER*TALTLSQYTKVALD 4813 Score = 51.5 bits (106), Expect = 2e-05 Identities = 47/181 (25%), Positives = 73/181 (40%) Frame = -2 / +1 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y + S R +SV ++T + +C GVL ++ S Q IC Y WS + Sbjct: 4393 YRLSQSCRSTSVPHFHQTRHFVCGPAGVLTHA*SSRSPSRRSQKDFAICPRYN*SWSPYS 4572 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 + C F* LG + R + +C+ W MV HC + V Sbjct: 4573 AFSGH*PCCLF*R*LGWLSRHS*VHIRLCSFSW*QPCIMVIQAPEHCLSVEC*S*VSCCG 4752 Query: 1148 KCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRES 969 KC S + A + +* L ++* C + + QSS + N+A DR + +S Sbjct: 4753 KCGCRSQLVAPTPP*ASFPAI*SHLGVL**CERSLSLLQSSTASTNEACQDRSTLRA*QS 4932 Query: 968 C 966 C Sbjct: 4933 C 4935
>LOC_Os01g05370:12001.t00422:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4939 Score = 270 bits (585), Expect(2) = 3e-77 Identities = 111/220 (50%), Positives = 152/220 (69%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D+T+YR L GALQYLT TRPDI+FAV +VC ++H P H A KRI+RY++ TL++GL Sbjct: 4262 DSTQYRSLAGALQYLTFTRPDIAFAVQQVCLYMHDPREPHLAALKRILRYIQGTLSLGLT 4441 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +SP T + ++++DWAGC D RRST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4442 MRRSPPTDLVVYTDADWAGCPDTRRSTSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRA 4621 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +AN AE W++ +L EL +CDNV A YLS+N V H RTKH+EID HFV E Sbjct: 4622 VANGVAEATWLRQLLMELHRPPRTATVVYCDNVSAMYLSSNPVQHQRTKHVEIDLHFVRE 4801 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK L T F++F+ +L + Sbjct: 4802 KVALGHVRVLHVPTTSQYADVFTKGLPTSLFQEFRTSLTI 4921 Score = 40.0 bits (81), Expect(2) = 3e-77 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 + L LSQ +Y+ D++++ G+ CKP TP+ KLS Sbjct: 4130 SGLFLSQRQYSQDILERAGMGECKPCSTPVDVHSKLS 4240 Score = 66.6 bits (139), Expect(3) = 4e-23 Identities = 34/81 (41%), Positives = 44/81 (54%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 +S S + + SA FA+A Y AS L+ +TV C L D + RL P+N A P VER S P Sbjct: 4674 SSISSCRSQVASATPFATARYSASALERDTVCCRLEDQDTRLSPRNTAYPEVERRVSGQP 4495 Query: 1281 AQSELEKALTSVEGDLLKFRP 1343 AQS SV G+ +P Sbjct: 4494 AQSASVYTTRSVGGERRMVKP 4432 Score = 41.8 bits (85), Expect(3) = 4e-23 Identities = 24/47 (51%), Positives = 27/47 (57%) Frame = +3 / -2 Query: 1374 IRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 I L A K +G+C HT TA ISG V+VKY RAP R Y V S Sbjct: 4401 ILLRAAKWGSLGSCI*RHTC*TANAISGRVNVKYWRAPARLRYCVES 4261 Score = 38.6 bits (78), Expect(3) = 4e-23 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK*+SIS CFV T L ++Y+A TLS Sbjct: 4809 ATFSRTK*RSISTCFVRWCCTGLLERYIALTLS 4711 Score = 45.1 bits (92), Expect = 0.001 Identities = 28/101 (27%), Positives = 49/101 (48%) Frame = +2 / -1 Query: 1211 P*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSC 1390 P E+ +KK+C P + + + P+ I CR A T Q +++ L S Sbjct: 4564 PGYEVIAKKHCVPRSRATCVRTARPICIGVYNKICRW*AAHGQTERQGALYVAQNPLESS 4385 Query: 1391 EVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 ++ M THL+ SK +I + +CQIL+S +T++ + Sbjct: 4384 QMGFPGIMHIKTHLLNSKCNIGASECQILESASKTAILCGI 4262
>LOC_Os11g35740:12011.t03121:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4530 Score = 258 bits (557), Expect(2) = 4e-77 Identities = 109/218 (50%), Positives = 148/218 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP+I++AV +VC F+H H KRI+RY+K TL+IGL+ Sbjct: 3832 DPTEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHDSREPHLALVKRILRYIKGTLHIGLH 4011 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P + A+S++D AGC D RRST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4012 IGTAPVDSLIAYSDAD*AGCPDSRRSTSGYCVFLGENLVSWSSKRQTTVSRSSAEAEYRA 4191 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL I + +CDNV A Y++AN V H +TKHIEID HFV E Sbjct: 4192 VAHAVAECCWLRQLLLELHIPLASATTVYCDNVSAVYMTANPVHHRQTKHIEIDIHFVRE 4371 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F +F+ +L Sbjct: 4372 KVALGQVHVLHVPSSHQFADIMTKGLPVQLFTEFRSSL 4485 Score = 52.4 bits (108), Expect(2) = 4e-77 Identities = 19/44 (43%), Positives = 30/44 (68%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ + KLS ++G P+ Sbjct: 3697 DGLFLSQRQYAVDLLRRAGMSECHPTATPVDARCKLSAIDGAPV 3828 Score = 96.8 bits (205), Expect(3) = 7e-26 Identities = 58/127 (45%), Positives = 67/127 (52%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS LD ETV C L DHE + P+ P VER S PA S E A+ Sbjct: 4211 SATACATARYSASALDRETVVCRLEDHETKFSPRKTQYPDVERRESGQPA*SASE*AIKE 4032 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G + RP+ V IRL +* +C N HT TA ISG V V+Y*RAP R Sbjct: 4031 STGAVPM*RPMCRVPLM*RKIRLTRAR*GSRESCINKHTC*TA*AISGRVRVRY*RAPAR 3852 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 3851 LLYSVGS 3831 Score = 31.3 bits (62), Expect(3) = 7e-26 Identities = 20/33 (60%), Positives = 21/33 (63%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFV * T LA A TLS Sbjct: 4379 ATFSRTK*ISISICFV*R**TGLAVM*TALTLS 4281 Score = 28.1 bits (55), Expect(3) = 7e-26 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ +S GV VG P KS AY *ER Sbjct: 3824 GAPSIAESLHRASTGVAVG*HSDIPARRNKSTAYCR*ER 3708 Score = 34.1 bits (68), Expect = 3.0 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P F +C C V RS +SGL P*+++ +++ P C T+ I + V IR S Sbjct: 4221 PATFGNSMCYCTVLSFSTRSRDSGLSLGGP*DQVFTEENTIP*CGTTRIRTTRLVSIRIS 4042 Query: 1304 THKCRRGLAEI*TNI 1348 + +++ TN+ Sbjct: 4041 YQRVNWCSSDVKTNV 3997
>LOC_Os10g39530:12010.t03196:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4349 Score = 263 bits (569), Expect(2) = 9e-77 Identities = 112/218 (51%), Positives = 148/218 (67%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D++ YR + GALQYLTLTRPDI++AV +VC +HAP H T KRI+RY+K T GL+ Sbjct: 3534 DSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLH 3713 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++AFS++DWAGC D RRST GF IF G +LISWS+++Q TVSRSS EA Y+ Sbjct: 3714 LRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRG 3893 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + + +CDN+ + Y+S N V H RTKHIE+D HFV E Sbjct: 3894 VANAVAECTWLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVRE 4073 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA L + I S Q AD FTK L + F +F+ +L Sbjct: 4074 KVALGELRVLPIPSAHQFADVFTKGLPSSMFNEFRASL 4187 Score = 45.5 bits (93), Expect(2) = 9e-77 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 LSQ KYATD++++ G+ CK TP + KLS EG Sbjct: 3412 LSQSKYATDVLERAGMANCKAVATPADAKPKLSSNEG 3522 Score = 99.6 bits (211), Expect(3) = 1e-25 Identities = 55/123 (44%), Positives = 69/123 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ LY AS LDLETV C L D EMR P+ + P VER S PAQS KA++ Sbjct: 3913 SATAFATPLYSASALDLETVVCRLDDQEMRESPRKMQKPDVERRVSGQPAQSASLKAVSV 3734 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + +P +V IR + V * GAC HT +TA +SG V V+Y RAP Sbjct: 3733 GDVEARRCKPNAAVPLM*RRIRFSRVT*ASRGACMCKHTCWTA*AMSGRVKVRYWRAPAM 3554 Query: 1494 HLY 1502 Y Sbjct: 3553 LRY 3545 Score = 29.0 bits (57), Expect(3) = 1e-25 Identities = 19/37 (51%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 FVN SA * I R S AT S TK S SMC V Sbjct: 4144 FVNTSAN*WALGIGRTRSSPSATFSLTKWMSSSMCLV 4034 Score = 27.2 bits (53), Expect(3) = 1e-25 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +3 / -1 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAY 1628 PS+ DS + GV LQ P SVAY Sbjct: 3521 PSLLDSLGLASAGVATALQFAMPARSRTSVAY 3426
>LOC_Os02g06140:12002.t00512:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5026 Score = 263 bits (569), Expect(2) = 1e-76 Identities = 112/218 (51%), Positives = 148/218 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D++ YR + GALQYLTLTRPDI++AV +VC +HAP H T KRI+RY+K T GL+ Sbjct: 3535 DSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLH 3714 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++AFS++DWAGC D RRST GF IF G +LISWS+++Q TVSRSS EA Y+ Sbjct: 3715 LRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRG 3894 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + + +CDN+ + Y+S N V H RTKHIE+D HFV E Sbjct: 3895 VANAVAECTWLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVRE 4074 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA L + I S Q AD FTK L + F +F+ +L Sbjct: 4075 KVALGELRVLPIPSAHQFADVFTKGLPSSMFNEFRASL 4188 Score = 45.1 bits (92), Expect(2) = 1e-76 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 LSQ KYATD++++ G+ CK TP + KLS EG Sbjct: 3412 LSQSKYATDVLERAGMANCKAVDTPADAKPKLSSDEG 3522 Score = 99.6 bits (211), Expect(2) = 7e-23 Identities = 55/123 (44%), Positives = 69/123 (56%) Frame = +3 / -3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ LY AS LDLETV C L D EMR P+ + P VER S PAQS KA++ Sbjct: 3914 SATAFATPLYSASALDLETVVCRLDDQEMRESPRKMQKPDVERRVSGQPAQSASLKAVSV 3735 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + +P +V IR + V * GAC HT +TA +SG V V+Y RAP Sbjct: 3734 GDVEARRCKPNAAVPLM*RRIRFSRVT*ASRGACMCKHTCWTA*AMSGRVKVRYWRAPAM 3555 Query: 1494 HLY 1502 Y Sbjct: 3554 LRY 3546 Score = 29.0 bits (57), Expect(2) = 7e-23 Identities = 19/37 (51%), Positives = 19/37 (51%) Frame = +3 / -3 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 FVN SA * I R S AT S TK S SMC V Sbjct: 4145 FVNTSAN*WALGIGRTRSSPSATFSLTKWMSSSMCLV 4035
>LOC_Os01g67800:12001.t06137:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4335 Score = 263 bits (569), Expect(2) = 1e-76 Identities = 112/218 (51%), Positives = 148/218 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D++ YR + GALQYLTLTRPDI++AV +VC +HAP H T KRI+RY+K T GL+ Sbjct: 3535 DSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLH 3714 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++AFS++DWAGC D RRST GF IF G +LISWS+++Q TVSRSS EA Y+ Sbjct: 3715 LRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRG 3894 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + + +CDN+ + Y+S N V H RTKHIE+D HFV E Sbjct: 3895 VANAVAECTWLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVRE 4074 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA L + I S Q AD FTK L + F +F+ +L Sbjct: 4075 KVALGELRVLPIPSAHQFADVFTKGLPSSMFNEFRASL 4188 Score = 45.1 bits (92), Expect(2) = 1e-76 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 LSQ KYATD++++ G+ CK TP + KLS EG Sbjct: 3412 LSQSKYATDVLERAGMANCKAVATPADAKPKLSSDEG 3522 Score = 99.6 bits (211), Expect(2) = 7e-23 Identities = 55/123 (44%), Positives = 69/123 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ LY AS LDLETV C L D EMR P+ + P VER S PAQS KA++ Sbjct: 3914 SATAFATPLYSASALDLETVVCRLDDQEMRESPRKMQKPDVERRVSGQPAQSASLKAVSV 3735 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + +P +V IR + V * GAC HT +TA +SG V V+Y RAP Sbjct: 3734 GDVEARRCKPNAAVPLM*RRIRFSRVT*ASRGACMCKHTCWTA*AMSGRVKVRYWRAPAM 3555 Query: 1494 HLY 1502 Y Sbjct: 3554 LRY 3546 Score = 29.0 bits (57), Expect(2) = 7e-23 Identities = 19/37 (51%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 FVN SA * I R S AT S TK S SMC V Sbjct: 4145 FVNTSAN*WALGIGRTRSSPSATFSLTKWMSSSMCLV 4035
>LOC_Os05g28340:12005.t02483:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2770 Score = 263 bits (569), Expect(2) = 1e-76 Identities = 112/218 (51%), Positives = 148/218 (67%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D++ YR + GALQYLTLTRPDI++AV +VC +HAP H T KRI+RY+K T GL+ Sbjct: 1955 DSSWYRSIAGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLH 2134 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++AFS++DWAGC D RRST GF IF G +LISWS+++Q TVSRSS EA Y+ Sbjct: 2135 LRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRG 2314 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + + +CDN+ + Y+S N V H RTKHIE+D HFV E Sbjct: 2315 VANAVAECTWLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRTKHIELDIHFVRE 2494 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA L + I S Q AD FTK L + F +F+ +L Sbjct: 2495 KVALGELRVLPIPSAHQFADVFTKGLPSSMFNEFRASL 2608 Score = 45.1 bits (92), Expect(2) = 1e-76 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 LSQ KYATD++++ G+ CK TP + KLS EG Sbjct: 1832 LSQSKYATDVLERAGMANCKAVATPADAKPKLSSDEG 1942 Score = 99.6 bits (211), Expect(2) = 7e-23 Identities = 55/123 (44%), Positives = 69/123 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ LY AS LDLETV C L D EMR P+ + P VER S PAQS KA++ Sbjct: 2334 SATAFATPLYSASALDLETVVCRLDDQEMRESPRKMQKPDVERRVSGQPAQSASLKAVSV 2155 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + +P +V IR + V * GAC HT +TA +SG V V+Y RAP Sbjct: 2154 GDVEARRCKPNAAVPLM*RRIRFSRVT*ASRGACMCKHTCWTA*AMSGRVKVRYWRAPAM 1975 Query: 1494 HLY 1502 Y Sbjct: 1974 LRY 1966 Score = 29.0 bits (57), Expect(2) = 7e-23 Identities = 19/37 (51%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 FVN SA * I R S AT S TK S SMC V Sbjct: 2565 FVNTSAN*WALGIGRTRSSPSATFSLTKWMSSSMCLV 2455
>LOC_Os06g28390:12006.t02543:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6594 Score = 262 bits (567), Expect(2) = 2e-76 Identities = 110/220 (50%), Positives = 147/220 (66%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDI +AV +VC +H P H A KRI+RYV+ T+ +GL+ Sbjct: 5899 DPTDYRSLAGALQYLTFTRPDIQYAVQQVCLHMHDPRESHLIALKRILRYVRGTMELGLH 6078 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S + A+S++DWAGC D R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 6079 IRTSSSHDLVAYSDADWAGCADTRKSTSGYAVFLGDNLVSWSSKRQQTVSRSSTEAEYRA 6258 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + +CDNV A YLS N V H R KH+EID HFV E Sbjct: 6259 VANAVAETCWLRQLLHELHSLPERATLVYCDNVSAVYLSTNPVQHQRMKHVEIDLHFVRE 6438 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK T F +F+++LN+ Sbjct: 6439 KVAIGSVRVLHVPTTSQFADIFTKGQPTTVFTEFRYSLNV 6558 Score = 45.1 bits (92), Expect(2) = 2e-76 Identities = 16/44 (36%), Positives = 28/44 (63%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +Y ++++ G+ CKP TP+ +T KLS +G+ + Sbjct: 5764 SGLFLSQRQYCLEILEHAGMTDCKPCSTPVDTTSKLSSTDGSRV 5895 Score = 93.6 bits (198), Expect(2) = 5e-22 Identities = 56/124 (45%), Positives = 69/124 (55%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + SA AFA+A Y AS+L+ ETV L D E RL PKN A P V+ S HPAQS E Sbjct: 6290 SQQVSATAFATARYSASVLERETVCWRLDDQETRLSPKNTA*PEVDLRVSAHPAQSASE* 6111 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 A S E D+ P V T IRL A++* G+C T +TA +SG V+V+Y Sbjct: 6110 ATKS*EDDVRMCNPSSIVPRT*RRIRLRAMR*DSRGSCI*RQTCWTAY*MSGRVNVRYCN 5931 Query: 1482 APTR 1493 AP R Sbjct: 5930 APAR 5919 Score = 32.2 bits (64), Expect(2) = 5e-22 Identities = 18/33 (54%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK KSIS CF+ T L D+ A TLS Sbjct: 6446 ATFSRTKCKSISTCFMRWCCTGLVDR*TALTLS 6348 Score = 48.7 bits (100), Expect = 1e-04 Identities = 31/112 (27%), Positives = 46/112 (41%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 +V D + + +CC + + ++ S HS Q S +C + W V F Sbjct: 5934 TVSDIHSARHSVCCPASLSSYA*SSRVSSHSSQTDSSLCPRHYGTWVAHSHVVFSRLGGL 6113 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKC 1143 F RLG M R + +C I S +V ++C *HR V G KC Sbjct: 6114 FRCRLGWMCRYTQVHLGLCCILG*QSCLLVIQAPANCLPF*HRS*VPGCCKC 6269
>LOC_Os08g35520:12008.t03292:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6251 Score = 265 bits (574), Expect(2) = 4e-76 Identities = 109/220 (49%), Positives = 155/220 (70%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDIS+AV +VC +H P V+ TA KRI+RYV+ T+++GL+ Sbjct: 4273 DPTDYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREVYLTALKRILRYVRGTIDLGLH 4452 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S +T + +S++DW GC + R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4453 IQRSQATDLVVYSDADWTGCPNTRKSTSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRA 4632 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA A+ W++ +L EL SK +CDNV A YLS+N V H RTKH++ID HFV + Sbjct: 4633 VANAVAKASWLRQLLHELHSPPSKANLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVRD 4812 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA ++ + + + Q AD FTK L + F +F+ +LN+ Sbjct: 4813 KVALGVVQVLHVPTSSQYADIFTKGLPSLVFIEFRSSLNV 4932 Score = 40.9 bits (83), Expect(2) = 4e-76 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 L L Q +Y+ D++++ G+ CKP TP+ + KLS G Sbjct: 4144 LFLHQRQYSLDILERAGMTDCKPCATPVDTCAKLSSTNG 4260 Score = 95.5 bits (202), Expect(2) = 1e-21 Identities = 56/119 (47%), Positives = 67/119 (56%) Frame = +3 / -1 Query: 1137 AVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSV 1316 A AFA+A Y AS L+ ETV L DH+ RL P+ A P V+ P QS E SV Sbjct: 4649 ATAFATARYSASALERETVFWRLDDHDTRLSPRKTA*PDVDLRVFGQPVQSASE*TTRSV 4470 Query: 1317 EGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + +RP V TY I L AV+*T G+C HT +TA EISGLV V+Y* AP R Sbjct: 4469 A*ER*IWRPRSIVPRTYRKILLRAVR*TSRGSCMCKHTCWTAYEISGLVKVRY*SAPAR 4293 Score = 29.0 bits (57), Expect(2) = 1e-21 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = +3 / -1 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLE 1088 ATLS TK +SI CFV T L ++ A TLS + L+ Sbjct: 4820 ATLSRTKCRSILTCFVR*CCTGLEER*TALTLSQYTKLALD 4698 Score = 35.4 bits (71), Expect(2) = 0.018 Identities = 23/80 (28%), Positives = 34/80 (42%) Frame = -2 / +3 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y + S R +SV ++T Y +C GVL ++ H Q IC Y WS + Sbjct: 4278 YRLSQSCRSTSVPHFHQTRYFVCGPAGVLTHA*SSRGLSHRSQKDFAICPRYN*SWSPYS 4457 Query: 1328 QVPFYTCECFF*FRLGRMPR 1269 + C F* L R+ + Sbjct: 4458 AFSGH*PCCLF*R*LDRLSK 4517 Score = 23.5 bits (45), Expect(2) = 0.018 Identities = 21/83 (25%), Positives = 34/83 (40%) Frame = -2 / +3 Query: 1214 MVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVC 1035 MV HC + V KC S + A + + +* L ++* C + + Sbjct: 4572 MVIQAPEHCLSLEC*S*VSRCGKCGCQSQLVAPTSP*AAFPAV*SQLGVL**CERSLSLL 4751 Query: 1034 QSSLSC*NKAH*DRFSFCVRESC 966 QSS + N+A DR + + C Sbjct: 4752 QSSTASTNEACQDRSTLRA*QGC 4820
>LOC_Os09g17020:12009.t01489:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4532 Score = 253 bits (546), Expect(2) = 6e-76 Identities = 106/218 (48%), Positives = 147/218 (67%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP+I++AV +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 3831 DPTEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHDPREPHLALVKRILRYIKGTLHIGLH 4010 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S ++A+S+++WAGC D R ST G+ +F G NL+SWS++ Q TVSRSS EA Y+A Sbjct: 4011 IGISHLDSLTAYSDAEWAGCPDSRCSTSGYCVFLGDNLVSWSSKLQTTVSRSSAEAEYRA 4190 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+ AE W++ +L EL I + + +CDNV A Y++AN + H +TKHIEID HFV E Sbjct: 4191 VAHVVAECCWLRQLLLELHISLASSTVVYCDNVSAVYMTANPMHHRQTKHIEIDIHFVRE 4370 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q +F+ +L Sbjct: 4371 KVALGQVRVLHVPSSHQFADIMTKGLPVQLVTEFRSSL 4484 Score = 53.3 bits (110), Expect(2) = 6e-76 Identities = 21/44 (47%), Positives = 29/44 (65%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ S KLS +G PI Sbjct: 3696 DGLFLSQRQYAVDLLRRAGMSECHPTTTPVDSRCKLSATDGAPI 3827 Score = 100 bits (213), Expect(3) = 9e-27 Identities = 58/127 (45%), Positives = 69/127 (54%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A+A Y AS L+ ETV C L D E RL P+ P VE+ S PA S E A++ Sbjct: 4210 SATTCATARYSASALERETVVCSLEDQETRLSPRKTQYPEVEQRESGQPAHSASE*AVSE 4031 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 ++ RPI SV IRL +* G+C N HT TA ISG V V+Y*RAP R Sbjct: 4030 SRCEIPM*RPICSVPLM*RKIRLTRAR*GSRGSCINKHTCCTA*AISGRVRVRY*RAPAR 3851 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 3850 LLYSVGS 3830 Score = 30.4 bits (60), Expect(3) = 9e-27 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +1 / -3 Query: 913 HQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHTRNR 1077 +QQ D E + V Q SL QNE SQ A F + D ++ HCH + + Sbjct: 4431 YQQTDEKTERVKHEPVLKQPSLEQNEYQSQYASFDDDASD*RSYRQR*HCHNKQQ 4267 Score = 28.6 bits (56), Expect(3) = 9e-27 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +3 / -2 Query: 1524 IGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 IG PS+ D+ GV VG P KS AY *ER Sbjct: 3826 IGAPSVADNLQRESTGVVVG*HSDIPARRNKSTAYCR*ER 3707 Score = 41.8 bits (85), Expect(2) = 4e-04 Identities = 29/110 (26%), Positives = 48/110 (43%) Frame = -2 / +2 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y +Q S CSSV ++ * LC GV V+ ++ +S SCQ + + + YWS Sbjct: 3836 YGVQESCWCSSVSYSHTA*DRLCSTTGVFVYA*SS*ASSCSCQTDFTLHQGHTTYWSSHW 4015 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI 1179 +C F* +G + F+ + W F+V T++ + Sbjct: 4016 NFAS*LTDCLF*C*VGWLS*FSLFHFGILCFSW*QPSFLVFQATNYSLSL 4165 Score = 29.0 bits (57), Expect(2) = 4e-04 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -2 / +2 Query: 1031 SSLSC*NKAH*DRFSFCVRESC 966 S S N+A+*D +SFC RE C Sbjct: 4313 SDASSSNEAY*D*YSFCSREGC 4378 Score = 38.2 bits (77), Expect(2) = 0.009 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 / -1 Query: 1412 M*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 M K THL+Y D+R C+ +ILKST +T V + Sbjct: 3932 MHKQTHLLYCISDLRPCESKILKSTSKTPVLRRI 3831 Score = 28.1 bits (55), Expect(2) = 0.009 Identities = 19/33 (57%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFV * LA A TLS Sbjct: 4378 ATFSRTK*ISISICFV*R*CIGLAVI*TALTLS 4280 Score = 32.7 bits (65), Expect = 7.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 / -3 Query: 1411 HVKTNTPCLQQRRYQVL*VSNTEEHLPDIC 1500 H TNTP + +R Q +* +TEEH D C Sbjct: 3933 HA*TNTPVVLHKRSQAV*E*DTEEHQQDSC 3844
>LOC_Os07g29570:12007.t02647:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5057 Score = 257 bits (556), Expect(2) = 2e-75 Identities = 110/220 (50%), Positives = 147/220 (66%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDI++AV +VC +H P H A KRI+RYV+ T++ L+ Sbjct: 4302 DPTDYRSLAGALQYLTFTRPDIAYAVQQVCLHMHDPRETHLAAIKRILRYVRGTMDYSLH 4481 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S+S ST + A+S++DW G D RST G+A+F G NLISWS+++Q TVSRSS EA Y+A Sbjct: 4482 KSRSSSTDLVAYSDADWVGYPDTLRSTSGYAVFLGDNLISWSSKRQNTVSRSSAEAEYRA 4661 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA E W++ +L EL ++ +CDNV A YLS N V H RTKHI ID HFV + Sbjct: 4662 VANAVPETCWLRQLLHELHTPPTRATLVYCDNVSAVYLSTNPVQHQRTKHINIDLHFVHD 4841 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK L + F +F+ NLN+ Sbjct: 4842 KVALGTVRVLHVPTSSQYADIFTKGLPSSVFCEFRSNLNI 4961 Score = 46.9 bits (96), Expect(2) = 2e-75 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = -3 / +3 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 N L LSQ +Y ++++++ G+ CKP TP+ + KLS +G P+ Sbjct: 4161 NSIGLILSQRQYCSEILERAGMLHCKPCSTPVDTCAKLSASDGQPV 4298 Score = 62.0 bits (129), Expect(4) = 1e-20 Identities = 34/73 (46%), Positives = 39/73 (53%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS+ S A A+A Y AS L+ ETV C L D EMRL P+ A P VER S P Sbjct: 4714 NSWRSCRNQHVSGTALATARYSASALERETVFCRLEDQEMRLSPRKTAYPEVERRVSG*P 4535 Query: 1281 AQSELEKALTSVE 1319 QS E A SV+ Sbjct: 4534 TQSASE*ATRSVD 4496 Score = 37.3 bits (75), Expect(4) = 1e-20 Identities = 20/40 (50%), Positives = 24/40 (60%) Frame = +3 / -2 Query: 1374 IRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 +RL A + G+C HT TA ISGLV V+Y RAP R Sbjct: 4441 MRLMAARCVSRGSCI*RHTC*TA*AISGLVKVRYWRAPAR 4322 Score = 30.9 bits (61), Expect(4) = 1e-20 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 ATLS TK +S+ MC V T L ++Y A TLS Sbjct: 4849 ATLS*TKWRSMLMCLVR*CCTGLVERYTALTLS 4751 Score = 25.4 bits (49), Expect(4) = 1e-20 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS DSF+ + GV GLQ P S Y ER Sbjct: 4294 GCPSEADSFAQVSTGVEHGLQ*SIPARSRISEQYCRCER 4178
>LOC_Os10g02700:12010.t00160:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2178 Score = 261 bits (564), Expect(2) = 3e-75 Identities = 111/218 (50%), Positives = 147/218 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D++ YR + GALQYLTLTRPDI++AV +VC +HAP H T KRI+RY+K T GL+ Sbjct: 1363 DSSWYRSITGALQYLTLTRPDIAYAVQQVCLHMHAPREAHVTLLKRILRYIKGTAAFGLH 1542 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++AFS++DWAGC D RRST GF IF G +LISWS+++Q TVSRSS EA Y+ Sbjct: 1543 LRASTSPTLTAFSDADWAGCPDTRRSTSGFCIFLGDSLISWSSKRQTTVSRSSAEAEYRG 1722 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL + + +CDN+ + Y+S N V H R KHIE+D HFV E Sbjct: 1723 VANAVAECTWLRQLLGELHCRVPQATIAYCDNISSVYMSKNPVHHKRIKHIELDIHFVRE 1902 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA L + I S Q AD FTK L + F +F+ +L Sbjct: 1903 KVALGELRVLPISSAHQFADVFTKGLPSSMFNEFRASL 2016 Score = 42.8 bits (87), Expect(2) = 3e-75 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 LSQ KYAT+++++ G+ CK TP + KLS EG Sbjct: 1240 LSQSKYATNVLERAGMANCKAVATPADAKPKLSSDEG 1350 Score = 99.6 bits (211), Expect(2) = 1e-22 Identities = 55/123 (44%), Positives = 69/123 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ LY AS LDLETV C L D EMR P+ + P VER S PAQS KA++ Sbjct: 1742 SATAFATPLYSASALDLETVVCRLDDQEMRESPRKMQKPDVERRVSGQPAQSASLKAVSV 1563 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + +P +V IR + V * GAC HT +TA +SG V V+Y RAP Sbjct: 1562 GDVEARRCKPNAAVPLM*RRIRFSRVT*ASRGACMCKHTCWTA*AMSGRVKVRYWRAPVM 1383 Query: 1494 HLY 1502 Y Sbjct: 1382 LRY 1374 Score = 28.6 bits (56), Expect(2) = 1e-22 Identities = 18/37 (48%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 FVN SA * I R S AT S TK S SMC + Sbjct: 1973 FVNTSAN*WALDIGRTRSSPSATFSLTKWMSSSMCLI 1863
>LOC_Os04g16950:12004.t01449:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9658 Score = 114 bits (244), Expect(4) = 4e-75 Identities = 47/86 (54%), Positives = 64/86 (74%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN+GATYLS + +FHART HIE+D++FV ER + K L+I+FI S D++ADGFTK+L Q Sbjct: 1621 CDNLGATYLSVDPLFHARTYHIEVDYYFVRERFSRKQLEIKFISSGDRIADGFTKSLAVQ 1800 Query: 886 SFEDFKHNLNLIKL*LRKGVKQAGSV 809 F++F +NLNL KL L + V + Sbjct: 1801 PFKNFVYNLNLDKLLLNEKVSDGAII 1878 Score = 111 bits (237), Expect(4) = 4e-75 Identities = 44/70 (62%), Positives = 53/70 (75%) Frame = -3 / +2 Query: 1273 LDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGI 1094 +DD RS GGFA+F G NLI WSARKQA VS+SS E YKA+AN T EVIW+Q++LKE+GI Sbjct: 1412 VDDMRSVGGFAVFLGSNLI*WSARKQAIVSKSSTEVEYKAVANTTTEVIWIQTLLKEIGI 1591 Query: 1093 KSSKTPCFWC 1064 +T WC Sbjct: 1592 SMPQTISLWC 1621 Score = 91.3 bits (193), Expect(4) = 4e-75 Identities = 40/67 (59%), Positives = 47/67 (70%) Frame = -3 / +1 Query: 1564 SSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTA 1385 ++TEKLS G + D T+YR + GALQYLTLTRPDISFAVNKVC FLH+PT H A Sbjct: 1126 TTTEKLSAYTGNTLGVNDATQYRSIFGALQYLTLTRPDISFAVNKVCQFLHSPTVQHRMA 1305 Query: 1384 AKRIVRY 1364 + I Y Sbjct: 1306 VEDIEIY 1326 Score = 23.5 bits (45), Expect(4) = 4e-75 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -3 / +3 Query: 1309 VSAFSNSDWA 1280 VSAFS++DWA Sbjct: 1377 VSAFSDADWA 1406 Score = 86.8 bits (183), Expect(3) = 4e-40 Identities = 38/81 (46%), Positives = 50/81 (61%) Frame = +3 / -2 Query: 1059 LSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKN 1238 ++H K V + IP S C H+TS V A+ALY S+LDLET+ACFLA H +R P+N Sbjct: 1626 ITHHKLIV*GIEIPISLRRVCIHITSVVVLATALYSTSVLDLETIACFLALHHIRFDPRN 1447 Query: 1239 IANPPVERLSSRHPAQSELEK 1301 A PP +R+SS L+K Sbjct: 1446 TAKPPTDRISSTELPNLHLKK 1384 Score = 69.8 bits (146), Expect(3) = 4e-40 Identities = 34/66 (51%), Positives = 44/66 (66%) Frame = +3 / -3 Query: 1365 YLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMR 1544 Y++I A++ VG C+N* TLFTAKEISGLV+VKY +AP LY V S +P Sbjct: 1325 YISISSTAIRCCTVGLCRN*QTLFTAKEISGLVNVKYCKAPNILLY*VASFTPKVLPV*A 1146 Query: 1545 DSFSVL 1562 D+FSV+ Sbjct: 1145 DNFSVV 1128 Score = 48.3 bits (99), Expect(3) = 4e-40 Identities = 30/54 (55%), Positives = 32/54 (59%) Frame = +3 / -3 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 V PSA S E IN +S LS TK* S S+ VLA*K DKYVAP LSH Sbjct: 1781 VKPSAIRSPEDINLISNCFLENLSLTK**STSI**VLA*KRGSTDKYVAPKLSH 1620 Score = 45.1 bits (92), Expect(4) = 4e-16 Identities = 27/70 (38%), Positives = 38/70 (54%) Frame = +2 / -2 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IG 1036 V+I++++ K L + K I I * K N Q S SHK+ IY ++ SSMK I Sbjct: 1830 VKIVYKILKWLNSK*LSKTICYPIS*RYKLNFQLLPRKSFSHKIIIYFYMISSSMKKGIH 1651 Query: 1037 RQVCGSNIVT 1066 Q+C S I+T Sbjct: 1650 *QICSSQIIT 1621 Score = 37.7 bits (76), Expect(4) = 4e-16 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = +2 / -2 Query: 1406 WCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 W M*KLT+L++ K DI S +C +L S+ T + S + Sbjct: 1284 WTM*KLTNLIHCKRDIWSSQC*VL*SSKYTPILSCI 1177 Score = 31.8 bits (63), Expect(4) = 4e-16 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 / -1 Query: 1055 NIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC*CLV 1162 N TP+T SLR L L+PY CGI C + Sbjct: 1630 NYHTPQTYSLRHRNPYLFKKSLYPYYLCCGISNCFI 1523 Score = 24.9 bits (48), Expect(4) = 4e-16 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +1 / -3 Query: 1183 WKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQV 1314 WKQ LVF* ++ D Q+ Q L HL P *K ++V Sbjct: 1502 WKQ*LVF*HSIISDLTQETQQNLQLIAYHLQNCPICI*KSTNKV 1371 Score = 42.3 bits (86), Expect(2) = 1e-09 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = -2 / +1 Query: 1319 FYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HR 1170 ++T F ++G+ R* + C + W S M C*KTS+CFQ+ +R Sbjct: 1366 YFTLLVLFQMQIGQFCR*YAISWRFCCVSWVKSDMMEC*KTSYCFQVKYR 1515 Score = 41.4 bits (84), Expect(2) = 1e-09 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 / +3 Query: 1052 SHILVCQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVY 906 S+I V S SC*N ++ R FC R+ +G+ VY F+RS W Y Sbjct: 1635 SYIFVSGSPFSC*NLSYRSRLLFCERKIF*EAIGN*VYIFRRSDSRWFY 1781 Score = 34.1 bits (68), Expect(2) = 1e-04 Identities = 18/47 (38%), Positives = 27/47 (57%) Frame = -1 / +2 Query: 1065 VTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLFIQKI 925 V + E H C I FMLE +*I IL E++ ++W L++Q+I Sbjct: 1622 VIIWELHICQWIPFFMLELII*K*IIIL*EKDFLGSNWKLSLYLQEI 1762 Score = 32.7 bits (65), Expect(2) = 1e-04 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 / +3 Query: 1236 FLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYG 1123 FL I + G+LENK LFP + + +PQ + YG Sbjct: 1449 FLGQI*YDGVLENKLLFPSQVQKLNIKQLLIPQQR*YG 1562 Score = 34.5 bits (69), Expect(2) = 0.003 Identities = 23/54 (42%), Positives = 29/54 (53%) Frame = +1 / -1 Query: 907 *THQQLDLLNE*TECPRVYLQLSLTQNENLSQCALF*HERLDWQTSMWLQHCHT 1068 * H DLL *T P ++ L+QN NL F*HE+ D T+M L + HT Sbjct: 1780 *NHLLSDLLKI*T*FPIAS*KIFLSQNNNLLLYDKF*HEKGDPLTNM*LPNYHT 1619 Score = 27.2 bits (53), Expect(2) = 0.003 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 / -1 Query: 1184 GNSGLFSSRP*NEIRSKKYCKPTC*TSVI 1270 GN+ LFSS P +I KK+ K + *+ +I Sbjct: 1501 GNNSLFSSTPSYQI*PKKHSKTSN*SHII 1415
>LOC_Os12g26420:12012.t02356:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4440 Score = 263 bits (569), Expect(2) = 1e-74 Identities = 109/218 (50%), Positives = 153/218 (70%) Frame = -3 / +1 Query: 1507 TKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFS 1328 T +R L GALQYLT TRPDIS+AV +VC +H P H A KRI+RY++ TL++ L+ Sbjct: 1534 TDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPRKPHLAALKRILRYIRGTLDLSLHIQ 1713 Query: 1327 KSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALA 1148 +S ++ ++ +S++DWAGC D RRS G+AIF G NL+SWS+++Q TVSRSS +A Y+A+A Sbjct: 1714 RSCTSDLTVYSDADWAGCPDTRRSMSGYAIFHGDNLVSWSSKRQHTVSRSSAKAEYRAVA 1893 Query: 1147 NATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERV 968 N+ AEV W++ +L EL S+ +CDNV A YLS+N V H RTK++EIDFHFV E+V Sbjct: 1894 NSVAEVTWLRQLLHELHSPPSRATLVYCDNVSAVYLSSNPVQHQRTKYVEIDFHFVREKV 2073 Query: 967 ANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 A + + + + Q AD FTK L T F +F+ +LN+ Sbjct: 2074 AVGAIRVLHVPTSSQYADIFTKGLPTPVFTEFRSSLNV 2187 Score = 38.6 bits (78), Expect(2) = 1e-74 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDS 1517 L+Q Y D++++ G+ CKP TP+ + KLS + G + + Sbjct: 1405 LNQR*YCLDILERAGMADCKPCNTPVDTCAKLSSVAGPTVSN 1530 Score = 84.9 bits (179), Expect(2) = 3e-18 Identities = 52/124 (41%), Positives = 66/124 (53%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 +H+TSA A+A Y A L+ +TV C D + RL P IA P +ER S PAQS E Sbjct: 1919 SHVTSATELATARYSALALERDTVCCRFEDQDTRLSPWKIA*PDMERRVSGQPAQSASE* 1740 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 + S D +R SV I L A +* + G+C T TA E+SGLV V+Y* Sbjct: 1739 TVRSEVQDRWMWRLRSSVPRM*RRILLRAAR*GLRGSCMWRQTCCTA*EMSGLVKVRY*S 1560 Query: 1482 APTR 1493 AP R Sbjct: 1559 APAR 1548 Score = 28.1 bits (55), Expect(2) = 3e-18 Identities = 18/33 (54%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK*KSIS FV T L ++ A TLS Sbjct: 2075 ATFSRTK*KSISTYFVR*CCTGLEER*TALTLS 1977 Score = 35.9 bits (72), Expect = 0.85 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = -2 / +3 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 RLGR+PR + W+ N+ W +V +H +* +GRV + HM Sbjct: 1752 RLGRLPRHSALHVWLRNLPWGQPRVLVLEAATHSVPL*RQGRVSRCGQLCGRGHM 1916
>LOC_Os03g20490:12003.t01806:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4321 Score = 265 bits (573), Expect(2) = 1e-74 Identities = 113/220 (51%), Positives = 150/220 (68%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T +R L GALQYLT TRPDIS+AV +VC +H P H TA KRI+RY++ TL GL+ Sbjct: 3626 DPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPRESHLTALKRILRYIRGTLEYGLH 3805 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S S + A+S+++WAGC D R+ST G+A+F G NLISWS+++Q TVSRSS EA Y+A Sbjct: 3806 IQRSSSFDLMAYSDANWAGCPDTRKSTFGYAVFLGDNLISWSSKRQNTVSRSSAEAEYRA 3985 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L EL SK +CDNV A YLS N V H RTKH+EID HFV E Sbjct: 3986 VANAVAETSWLRQLLHELYAPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVHE 4165 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 RV + + + + Q A+ FTK L + F +F+ +LN+ Sbjct: 4166 RVDVGAVRVLHVPTTSQYANVFTKGLPSPVFNEFRSSLNV 4285 Score = 36.3 bits (73), Expect(2) = 1e-74 Identities = 12/39 (30%), Positives = 24/39 (61%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 + L L+Q +Y +++++ G+ CKP TP+ ++ K S Sbjct: 3485 HSGGLLLTQRQYCLEILERAGMSDCKPCLTPVDTSAKFS 3601 Score = 112 bits (240), Expect = 6e-24 Identities = 74/176 (42%), Positives = 94/176 (53%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 +T S TK +SIS CFV T ++Y A TLS + LE NS+S + SA A Sbjct: 4173 STRS*TKWRSISTCFVR*C*TGFVERYTALTLSQ*TKVALEGGAYNSWSNCRSQEVSATA 3994 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+A Y AS L+ +TV L DHEMRL P+N A P V+ S PAQ E A+ S + D Sbjct: 3993 LATARYSASALERDTVF*RLEDHEMRLSPRNTAYPKVDLRVSGQPAQFASEYAMRSKDDD 3814 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 +P V IRL AV+ G+C T TA E+SGLV V+Y +AP R Sbjct: 3813 R*ICKPYSKVPRI*RKIRLRAVRWDSRGSCICKQTC*TAYEMSGLVKVRYCKAPAR 3646 Score = 37.7 bits (76), Expect = 0.24 Identities = 18/54 (33%), Positives = 26/54 (48%) Frame = -2 / +1 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS 1137 F* LG + R W+C + W SH MV * + +C * R+ + +C S Sbjct: 3841 F*CELGWLSRHT*IYLWICCVSW*QSHLMVL*ASEYCISF*C*SRISSSCQCSS 4002
>LOC_Os07g45410:12007.t04179:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 9379 Score = 258 bits (558), Expect(2) = 9e-74 Identities = 105/218 (48%), Positives = 147/218 (67%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR + GALQYLTLTRPD+++AV +VC F+H P H KRI+ +VK +L+ GL+ Sbjct: 7703 DPSEYRSIAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLALVKRILWHVKGSLSTGLH 7882 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 PS ++A+S++DWAGC D RST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 7883 IGSGPSQSLTAYSDADWAGCPDSHRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRA 8062 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL + + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 8063 VAHAVAECCWLRQLLLELHVPIASATIVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 8242 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + + Q D TK L Q F DF+ +L Sbjct: 8243 KVALGQVRVLHVPASHQFTDIMTKGLPVQLFTDFRSSL 8356 Score = 40.5 bits (82), Expect(2) = 9e-74 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ +YA DL+ + G+ T TP+ + KLS +G P+ Sbjct: 7574 LFLSQRQYAVDLLHRAGMAE*HSTSTPVDTRAKLSATDGLPV 7699 Score = 85.4 bits (180), Expect(2) = 8e-19 Identities = 53/123 (43%), Positives = 64/123 (52%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS L+ ETV L D E RL P+ P VER S PAQS E A+ Sbjct: 8082 SATA*ATARYSASALERETVVWRLEDQETRLSPRKTQ*PDVER*ESGQPAQSASEYAVRD 7903 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G +RP+ + FT IRL +* G+C T TA SG V+V+Y RAP Sbjct: 7902 *LGPEPMWRPVERLPFTCQRIRLTKAR*GSRGSCMKRQTC*TA*AKSGRVNVRYCRAPAM 7723 Query: 1494 HLY 1502 LY Sbjct: 7722 LLY 7714 Score = 29.5 bits (58), Expect(2) = 8e-19 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK SIS+CFV * T A A TLS Sbjct: 8250 ATFSRTKWMSISICFVRR*CTGFAVM*TALTLS 8152
>LOC_Os08g39710:12008.t03702:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3306 Score = 247 bits (533), Expect(2) = 1e-73 Identities = 99/179 (55%), Positives = 130/179 (72%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP+I++AV +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 2770 DPTEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHDPREPHLALVKRILRYIKGTLHIGLH 2949 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P + A+S++DWAGC D RRST G+ +F NL+SWS+++Q TVSRSS EA Y+A Sbjct: 2950 IGTAPVDSLIAYSDADWAGCPDSRRSTSGYCVFLDENLVSWSSKRQTTVSRSSAEAEYRA 3129 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 +A+A AE W++ +L EL I + T +CDNV A Y++AN V H RTKHIEID HFV* Sbjct: 3130 VAHAVAECCWIRQLLLELHIPLASTTIVYCDNVSAVYMTANPVHHRRTKHIEIDIHFV* 3306 Score = 51.5 bits (106), Expect(2) = 1e-73 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ + KLS +G P+ Sbjct: 2635 DGLFLSQRQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPV 2766 Score = 100 bits (214), Expect(3) = 1e-25 Identities = 59/127 (46%), Positives = 68/127 (53%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS LD ETV C L DHE + + P VER S PAQS E A+ Sbjct: 3149 SATACATARYSASALDRETVVCRLEDHETKFSSRKTQYPDVERRESGQPAQSASE*AIKE 2970 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G + RP+ V IRL +* G+C N HT TA ISG V V+Y*RAP R Sbjct: 2969 STGAVPM*RPMCRVPLM*RKIRLTRAR*GSRGSCINKHTC*TA*AISGRVRVRY*RAPAR 2790 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 2789 LLYSVGS 2769 Score = 28.1 bits (55), Expect(3) = 1e-25 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ +S GV VG P KS AY *ER Sbjct: 2762 GAPSVAESLHRASTGVAVG*HSDIPARRNKSTAYCR*ER 2646 Score = 26.3 bits (51), Expect(3) = 1e-25 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 981 TK*KSISMCFVLA*KTRLADKYVAPTLS 1064 TK* SIS+CFV * T LA A TLS Sbjct: 3302 TK*ISISICFVRR**TGLAVM*TALTLS 3219 Score = 37.7 bits (76), Expect = 0.24 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +2 / -1 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRK 1300 +P F +C C V RS +SGL P*+++ ++ P C T+ I + PV IR Sbjct: 3162 NPATFGNSMCYCTVLSFSTRSRDSGLSLGGP*DQVFIEENTIP*CGTTRIRTTRPVSIRI 2983 Query: 1301 STHKCRRGLAEI*TNI 1348 S + +++ TN+ Sbjct: 2982 SYQRVNWCSSDVKTNV 2935
>LOC_Os06g41200:12006.t03814:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 2699 Score = 253 bits (547), Expect(2) = 3e-73 Identities = 105/218 (48%), Positives = 146/218 (66%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR + GALQYLTLTRPD+++AV +VC F+H P H KRI+RYVK +L+ GL+ Sbjct: 1711 DPSEYRSIAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSTGLH 1890 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 P ++A+S++DWAGC D RST G+ +F G L+SWS+++Q TVSRSS EA Y+A Sbjct: 1891 IGSGPIQSLTAYSDADWAGCPDSPRSTSGYCVFLGDYLVSWSSKRQTTVSRSSAEAEYRA 2070 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L EL + + +CDNV A Y++AN V H TK+IEID HFV E Sbjct: 2071 VAHAVAECCWLRQLLLELHVPIASATIVYCDNVSAVYVTANPVHHRWTKYIEIDIHFVRE 2250 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F DF+ +L Sbjct: 2251 KVALGQVRVLHVPSSHQFADIMTKGLPVQLFTDFRSSL 2364 Score = 43.7 bits (89), Expect(2) = 3e-73 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ +YA DL+ + + C T TP+ + KLS +G P+ Sbjct: 1582 LFLSQRQYAVDLLHRASMAECHSTSTPVDTRAKLSATDGLPV 1707 Score = 85.8 bits (181), Expect(2) = 3e-17 Identities = 53/123 (43%), Positives = 64/123 (52%) Frame = +3 / -1 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS L+ ETV L D E R P+ P VER S PAQS E A+ Sbjct: 2090 SATA*ATARYSASALERETVVWRLEDQETR*SPRKTQ*PDVERGESGQPAQSASEYAVRD 1911 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G +RP+ + FTY IRL +* G+C T TA SG V+V+Y RAP Sbjct: 1910 *IGPEPMWRPVERLPFTYRRIRLTKAR*GSRGSCMKRQTC*TA*AKSGRVNVRYCRAPAM 1731 Query: 1494 HLY 1502 LY Sbjct: 1730 LLY 1722 Score = 24.0 bits (46), Expect(2) = 3e-17 Identities = 17/33 (51%), Positives = 18/33 (54%) Frame = +3 / -1 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK SIS+ FV * T A A TLS Sbjct: 2258 ATFSRTKWMSISIYFVHR*CTGFAVT*TALTLS 2160
>LOC_Os01g11140:12001.t00987:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4047 Score = 275 bits (594), Expect = 8e-73 Identities = 115/180 (63%), Positives = 143/180 (79%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 + L LSQE+YA +++K+ + GCKP TPLS+ EKLS EG + D+++YR +V ALQ Sbjct: 3502 DGLLLSQERYANEILKQVSMTGCKPVSTPLSTVEKLSAHEGEKLGVNDSSQYRSIVVALQ 3681 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF++NKVC FL P VH+ A KRI+RY++ T+ +GL KSPS++VSAFS Sbjct: 3682 YLTLTRPDISFSINKVCQFLQNPFVVHWAAVKRILRYLQGTVKLGLKIEKSPSSVVSAFS 3861 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DWAG LDDRRSTGGFA+F G NLISW+ARKQATVSRSS EA YKALANATAEV+W S Sbjct: 3862 DADWAGYLDDRRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEVMWNSS 4041 Score = 180 bits (387), Expect = 3e-44 Identities = 91/171 (53%), Positives = 111/171 (64%) Frame = +3 / -2 Query: 1125 HMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKA 1304 H+TSAVAFA ALY AS+LDL+TVACFLA HE++L P+ A PPV+ LSS++PAQS EKA Sbjct: 4031 HITSAVAFAKALYSASVLDLDTVACFLAFHEIKLEPRKTAKPPVDLLSSKYPAQSASEKA 3852 Query: 1305 LTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RA 1484 LT++EGD RP +V YL+I L A +*T G C+N* TL +ISGLVSVKY +A Sbjct: 3851 LTTLEGDFSILRPSLTVPCKYLSILLTAAQ*TTKGFCRN*QTLLIENDISGLVSVKYCKA 3672 Query: 1485 PTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 T Y + S PS DSFS ++ GV GL P S AY S* Sbjct: 3671 TTILRY*LESFTPNFSPS*ADSFSTVESGVLTGLHPVILTCLRISFAYLS* 3519 Score = 99.1 bits (210), Expect = 8e-20 Identities = 52/128 (40%), Positives = 70/128 (54%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P+ FSC IC + C R G LFSS P*++IR+ + CK C SVI* SCPV IR+ Sbjct: 4032 PHYFSCCICQSFIFCFSTRPGYCSLFSSIP*DQIRT*EDCKTPCRPSVI*ISCPVSIREG 3853 Query: 1304 THKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKS 1483 T+ RR T IS Y+ C +N +*+LT L+ + I SCKCQ+L S Sbjct: 3852 TYNTRR*FLNFETKFNCSLQIS*YSFNCCPMNNKRIL*ELTDLID*E*YIWSCKCQVL*S 3673 Query: 1484 TYQTSVFS 1507 T++ + Sbjct: 3672 YNNTTILT 3649 Score = 67.5 bits (141), Expect = 3e-10 Identities = 42/118 (35%), Positives = 65/118 (55%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++ DTYKT Y++ + G+ V T + SL S +KI + WS+ ++ F C+C Sbjct: 3678 TILDTYKTRYIILNQ*GLSVPTESFCCSLGSS*KNTKIFAGNS*TWSQN*EITF*CCKCL 3857 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHM 1125 * LGR+ R*Q R C++ * M C*KT + Q+*+ R+ KC+S*S++ Sbjct: 3858 L*C*LGRIFR*QKVYRGFCSLPRF*FDLMEC*KTGYSIQV*Y*SRI*SFGKCNS*SNV 4031 Score = 50.1 bits (103), Expect = 4e-05 Identities = 31/63 (49%), Positives = 38/63 (60%) Frame = -1 / +2 Query: 1320 LLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMP 1141 LL L*V L+ TGQD *MT+ Q LQ LI HG+LEN+ +P L +Q + QM Sbjct: 3836 LLVL*VPSLMLTGQDI*MTEGLQGVLQSS*VLI*SHGMLENRLQYPGLVLKQNIKLWQMQ 4015 Query: 1140 QLK 1132 QLK Sbjct: 4016 QLK 4024 Score = 38.2 bits (77), Expect = 0.17 Identities = 27/63 (42%), Positives = 34/63 (53%) Frame = +1 / -3 Query: 1132 LQLWHLLVPCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVCHLGILPSLN*KKHSQ 1311 LQL HL L + * W VF* +M+ +* LQ L CHL ILPS + ++H Q Sbjct: 4024 LQLLHLPKLYILLQY*TWIL*PVF*HSMRSN*NLGRLQNPL*TFCHLNILPSQHQRRHLQ 3845 Query: 1312 V*K 1320 *K Sbjct: 3844 H*K 3836
>LOC_Os11g40450:12011.t03586:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 12498 Score = 249 bits (539), Expect(2) = 1e-72 Identities = 101/218 (46%), Positives = 145/218 (66%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR + G LQYLTL RPD+++AV +VC F+H P H KRI+RYVK +L+ L+ Sbjct: 3900 DPSEYRSIAGTLQYLTLIRPDLTYAVQQVCLFMHDPREPHLALVKRILRYVKGSLSTSLH 4079 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S ++A+S++DWAGC D RRST G+ +F G NL+SWS+++Q TVSR S A Y+A Sbjct: 4080 IGSSMIQSLTAYSDADWAGCPDSRRSTSGYCVFLGDNLVSWSSKRQTTVSRYSAAAEYRA 4259 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A AE W++ +L+EL + + +CDNV A Y++AN + H RTKHI++D HFV E Sbjct: 4260 VAHAVAECCWLRQLLQELHVPITSATIVYCDNVSAVYMTANPMHHRRTKHIKVDIHFVRE 4439 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q AD TK L Q F DF+ +L Sbjct: 4440 KVALGQVRVLHVPSSHQFADIMTKGLPVQLFTDFRSSL 4553 Score = 45.5 bits (93), Expect(2) = 1e-72 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -3 / +3 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ +Y DL+++ G+ C T TP+ + KLS +G P+ Sbjct: 3771 LFLSQRQYVVDLLQRAGMAECHSTSTPVDTRAKLSATDGLPV 3896 Score = 50.1 bits (103), Expect(2) = 3e-10 Identities = 30/69 (43%), Positives = 37/69 (53%) Frame = +3 / -3 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 +S+S + SA A A+A Y A+ L ETV L D E RL P+ P VER S P Sbjct: 4312 SSWSNCRSQQHSATA*ATARYSAAAL*RETVVWRLEDQETRLSPRKTQ*PDVERRESGQP 4133 Query: 1281 AQSELEKAL 1307 AQS E A+ Sbjct: 4132 AQSASEYAV 4106 Score = 35.4 bits (71), Expect(2) = 3e-10 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +3 / -3 Query: 1359 FTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLY 1502 FTY IRL + G+C T TA SG ++V+Y R P LY Sbjct: 4054 FTYRRIRLTKARWGSRGSCMKRQTC*TAYVKSGRINVRYCRVPAMLLY 3911
>LOC_Os07g49040:12007.t04532:unspliced-genomic Ca2+/calmodulin-dependent protein kinase phosphatase, putative,| expressed Length = 6831 Score = 273 bits (591), Expect = 2e-72 Identities = 115/242 (47%), Positives = 160/242 (66%) Frame = -3 / +3 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 P P K + T D T YR +VGALQYLTLTRPD+S+AV +VC +H+P V Sbjct: 4977 PAPTPVDTKAKVSSTTGQPYSDPTFYRSIVGALQYLTLTRPDLSYAVQQVCLHMHSPRDV 5156 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLI 1217 H+T KRI+RYV+ T + GL +S + ++A+S++DWAGC D RRST GF +FFG +L+ Sbjct: 5157 HWTLVKRILRYVRGTTHKGLQLRRSSTPSLTAYSDADWAGCPDTRRSTSGFCVFFGDSLV 5336 Query: 1216 SWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLS 1037 SWS+++Q+ VSRSS EA Y+ +ANA AE W+ +L +L +K K +CDN+ A YLS Sbjct: 5337 SWSSKRQSIVSRSSAEAEYRGVANAAAECCWLHHLLGKLHVKLDKAMLVYCDNISAVYLS 5516 Query: 1036 ANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLN 857 N V H R KH+E+D HFV E+VA + + I ++ Q+AD TK L T FEDF+ +L Sbjct: 5517 KNPVHHGRAKHVELDVHFVWEKVAVGDIRVVHIPTRQQLADIMTKGLPTALFEDFRSSLC 5696 Query: 856 LI 851 ++ Sbjct: 5697 IV 5702 Score = 81.7 bits (172), Expect(2) = 3e-17 Identities = 48/119 (40%), Positives = 62/119 (52%) Frame = +3 / -3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ Y AS L+ +T+ C L DH+ + PK P VER S PAQS E A++ Sbjct: 5419 SAAAFATPRYSASALERDTMDCRLEDHDTKESPKKTQKPDVERRVSGQPAQSASEYAVSD 5240 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 + RP+ V T IR +V+ T G C T TA + SG V V+Y APT Sbjct: 5239 GVEERRSCRPLCVVPRT*RRIRFTSVQCTSRGECM*RQTCCTA*DKSGRVRVRYWSAPT 5063 Score = 27.6 bits (54), Expect(2) = 3e-17 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +3 / -3 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G P + ++ + + GVG GLQ R + AY S ER Sbjct: 5032 GCPVVLETLAFVSTGVGAGLQSARLARSSTLPAYCSCER 4916 Score = 44.6 bits (91), Expect = 0.002 Identities = 17/39 (43%), Positives = 25/39 (64%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTP 1526 LSQE+YA +++ + L CKP PTP+ + K+S G P Sbjct: 4917 LSQEQYAGNVLDRASLADCKPAPTPVDTKAKVSSTTGQP 5033
>LOC_Os04g21030:12004.t01837:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1939 Score = 169 bits (363), Expect(3) = 3e-72 Identities = 68/124 (54%), Positives = 90/124 (72%) Frame = -3 / -1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYL TRPDIS+AV +VC +H P H A KRI+RYV T++ GL+ Sbjct: 1642 DPTNYRSLAGALQYLIFTRPDISYAVQQVCLHMHDPREPHLAALKRILRYVHGTVDYGLH 1463 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S + +SA+S++DWAGC D R+ST G+A+F G NL+SWS+++Q VSRSS EA Y+ Sbjct: 1462 IRRSSTVDLSAYSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQLIVSRSSAEAEYRV 1283 Query: 1153 LANA 1142 +ANA Sbjct: 1282 VANA 1271 Score = 93.6 bits (198), Expect(3) = 3e-72 Identities = 40/91 (43%), Positives = 58/91 (63%) Frame = -3 / -2 Query: 1126 WVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDI 947 W++ +L EL S++ +CDNV A YLS+N V H RTKH+EID HFV +RVA + + Sbjct: 1266 WLRQLLHELHTPPSRSTLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRDRVAAGSVRV 1087 Query: 946 RFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 + + Q AD FTK L + F +F+ +LN+ Sbjct: 1086 LHVPTTSQFADIFTKGLPSAIFLEFRSSLNV 994 Score = 50.1 bits (103), Expect(3) = 3e-72 Identities = 17/44 (38%), Positives = 28/44 (63%) Frame = -3 / -1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + LHLSQ +Y ++++ G+ CKP TP+ + KLS +G P+ Sbjct: 1777 SGLHLSQRQYCLKVLERAGMTDCKPCATPVDTNAKLSAADGAPV 1646 Score = 87.2 bits (184), Expect(3) = 1e-20 Identities = 50/120 (41%), Positives = 68/120 (56%) Frame = +3 / +3 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 + A A+ Y AS L+ +T++ L D E +L P+N A P V+ L S PAQS E AL S Sbjct: 1263 ATTALATTRYSASALERDTIS*RLEDQETKLSPRNTA*PEVDFLVSGQPAQSASEYALKS 1442 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + RP +V +T +RL A +* G+C T +TA EISGLV ++Y RAP R Sbjct: 1443 TVEERRM*RP*STVPWT*RKMRLRAAR*GSRGSCM*RQTCWTA*EISGLVKIRYWRAPAR 1622 Score = 25.8 bits (50), Expect(3) = 1e-20 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = +3 / +2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK +SIS C V T L ++ A TLS Sbjct: 1106 ATRSRTKCRSISTCLVR*CCTGLEER*TALTLS 1204 Score = 25.4 bits (49), Expect(3) = 1e-20 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 / +3 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRP 1601 G PS +S +++ GV GLQ P Sbjct: 1650 GAPSAAESLALVSTGVAHGLQSVMP 1724 Score = 46.4 bits (95), Expect = 6e-04 Identities = 26/103 (25%), Positives = 45/103 (43%) Frame = -2 / -3 Query: 1469 DTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*F 1290 D ++ YLLCC G+ + +S Q + +C + WS + EC * Sbjct: 1598 DFHQARYLLCCPAGLSSHARSTGASSCCSQTHLALCPWHG*LWSSHPPLLHC*LECIL*C 1419 Query: 1289 RLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRV 1161 LGR+ Q + +C + W +V +++C + RGR+ Sbjct: 1418 *LGRLSGHQEIHLGLCCVPWRQLGLLVLQTSAYCIALQCRGRI 1290
>LOC_Os11g02700:12011.t00162:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3706 Score = 241 bits (521), Expect(2) = 4e-72 Identities = 96/183 (52%), Positives = 131/183 (71%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLTRP++++ V +VC F+H P H KRI+RY+K TL+IGL+ Sbjct: 3149 DPTEYRSLAGALQYLTLTRPELAYVVQQVCLFMHDPREPHLALIKRILRYIKGTLHIGLH 3328 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 + ++A+S++DWAGC D RRST G+ +F G NL+SWS++++ TVSRSS EA Y+A Sbjct: 3329 LGTTLVDSLTAYSHADWAGCPDSRRSTSGYCVFLGDNLVSWSSKRRTTVSRSSAEAEYRA 3508 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+ AE W++ +L EL I + +CDNV A Y++AN V H RTKHIEID HFV E Sbjct: 3509 VAHVVAECCWLRQLLFELHISLTSATVVYCDNVSAVYMTANPVHHRRTKHIEIDIHFVRE 3688 Query: 973 RVA 965 +VA Sbjct: 3689 KVA 3697 Score = 51.9 bits (107), Expect(2) = 4e-72 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +YA DL+K+ G+ C T TP+ + KLS +G P+ Sbjct: 3008 SSDGLFLSQRQYAVDLLKRAGMSECHSTATPIDALSKLSATDGAPV 3145 Score = 96.8 bits (205), Expect(3) = 2e-26 Identities = 58/127 (45%), Positives = 68/127 (53%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A+A Y AS LD ETV L DHE +L P+ P VER S HPAQS E A+ Sbjct: 3528 SATTCATARYSASALDRETVVRRLEDHETKLSPRKTQYPDVERRESGHPAQSA*E*AVRE 3349 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + RP+ SV IRL +* G+C N HT T SG V V+Y*RAP R Sbjct: 3348 STSVVPR*RPM*SVPLI*RKIRLIRAR*GSRGSCMNRHTC*TT*ASSGRVRVRY*RAPAR 3169 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 3168 LLYSVGS 3148 Score = 33.1 bits (66), Expect(3) = 2e-26 Identities = 20/33 (60%), Positives = 21/33 (63%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* SIS+CFVL * T A A TLS Sbjct: 3696 ATFSRTK*ISISICFVLR**TGFAVM*TALTLS 3598 Score = 28.6 bits (56), Expect(3) = 2e-26 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ D+ GV V P F KS AY *ER Sbjct: 3141 GAPSVADNLDRASIGVAVE*HSDIPARFNKSTAYCR*ER 3025 Score = 41.8 bits (85), Expect(2) = 1e-04 Identities = 31/130 (23%), Positives = 61/130 (46%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P S +C V L S N RP*+++ S++ C + I S P+ +R S Sbjct: 3538 PTTLSNDMCYSSVFSLGTGSRNCSPTLRRP*DQVVSEENTIS*CGATRIRTSSPISMRIS 3359 Query: 1304 THKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKS 1483 + + ++ TN++ +I+ T ++ + + THL+ + + + + +ILKS Sbjct: 3358 CQRINQCSTKVKTNVKCALNITQNTFDKSKMRLTRIVHE*THLLNNISKLGASQGKILKS 3179 Query: 1484 TYQTSVFSSV 1513 T +T +F + Sbjct: 3178 TRKTPIFCRI 3149 Score = 24.9 bits (48), Expect(2) = 1e-04 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHTRNR 1077 L QNE Q A F + LD Q+ HC + R Sbjct: 3686 LEQNEYQFQYASFCDDELDLQSCRQH*HCRNKQR 3585 Score = 40.0 bits (81), Expect(2) = 0.010 Identities = 30/83 (36%), Positives = 40/83 (48%) Frame = -1 / +3 Query: 1215 HGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVTMLEPHTCL 1036 HGLL F D R T * M L G + +++ + LR P+ TML T L Sbjct: 3447 HGLLSVGLQFLDPVPRLNTEL*HMSLLSVVGYDNFFSNFIFRLLRQPLFIATMLVLST*L 3626 Query: 1035 PI*SFMLEQSTLR*IFILCEREL 967 I + E+S L+ IFIL E+ L Sbjct: 3627 QIQFIIAERSILKLIFILFEKRL 3695 Score = 25.8 bits (50), Expect(2) = 0.010 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -2 / +1 Query: 1445 LCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWS 1338 LCC GV + ++ +S S Q Y + + +WS Sbjct: 3217 LCCSAGVSIHARSS*ASSCSYQTYFALY*GHTSHWS 3324
>LOC_Os12g04550:12012.t00344:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 844 Score = 267 bits (578), Expect(2) = 2e-71 Identities = 111/220 (50%), Positives = 152/220 (69%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR LVGALQYLT TRPDIS+AV +VC +H P VH A KRI+RYV+ T+++G + Sbjct: 149 DPTDYRSLVGALQYLTFTRPDISYAVQQVCLHMHDPREVHLAALKRILRYVRGTIDLGRH 328 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S +T + +S++DWAGC D R+ST G+A+F G NL+SWS+++Q VSRSS EA Y+A Sbjct: 329 IQRSQATDLVVYSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQNIVSRSSAEAEYRA 508 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L E SK +CDNV A YLS+N V H RTKH+EID HFV + Sbjct: 509 VANAVAEASWLRQLLHEFHSPPSKATLVYCDNVSAIYLSSNPVQHQRTKHVEIDLHFVRD 688 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + Q AD FTK L + F +F+ +LN+ Sbjct: 689 KVALGAVRVLHVPTSSQYADIFTKGLPSPVFVEFRSSLNV 808 Score = 23.5 bits (45), Expect(2) = 2e-71 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = -3 / +2 Query: 1594 QGCKPTPTPLSSTEKLSLMEGTPI 1523 Q P TP+ + KLS +G P+ Sbjct: 74 QSPTPCATPVDTCTKLSSTDGPPV 145 Score = 125 bits (267), Expect = 1e-27 Identities = 78/176 (44%), Positives = 98/176 (55%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 ATLS TK +SIS CFV T L ++ +A TLS + L+ NS+ + SA A Sbjct: 696 ATLSRTKCRSISTCFVR*CCTGLEER*IALTLSQYTKVALDGGE*NSWRSWRNQLASATA 517 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 FA+A Y AS LD ET+ L DH+ RL P+ A P V+ S PAQS E SV + Sbjct: 516 FATARYSASALDRETMFWRLDDHDTRLSPRKTA*PDVDLRVSGQPAQSASE*TTRSVA*E 337 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 +RP V TY I L A + T G+C HT +TA E+SGLV V+Y* APTR Sbjct: 336 R*IWRPRSIVPRTYRKILLRAARWTSRGSCMCKHTCWTAYEMSGLVKVRY*SAPTR 169 Score = 50.1 bits (103), Expect = 4e-05 Identities = 46/181 (25%), Positives = 73/181 (40%) Frame = -2 / +1 Query: 1508 Y*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQ 1329 Y + S R +SV ++T + +C GVL ++ S Q IC Y WS + Sbjct: 154 YRLSQSCRSTSVPHFHQTRHFVCGPAGVLTHA*SSRSPSRRSQKDFAICPRYN*SWSPYS 333 Query: 1328 QVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTS 1149 + C F* LG + R + +C+ W MV HC + V Sbjct: 334 AFSGH*PCCLF*R*LGWLSRHS*VHIRLCSFSW*QPCIMVIQAPEHCLSVEC*S*VSCCG 513 Query: 1148 KCHS*SHMGAIHAKGVGYKKL*DSLFLV*QCWSHILVCQSSLSC*NKAH*DRFSFCVRES 969 KC S + A V + +* L ++* C ++ + QSS + N+ DR + + Sbjct: 514 KCGCRSQLVAPTPP*VSFPAV*SHLGVL**CERNLSLLQSSTASTNETCRDRSTLRA*QG 693 Query: 968 C 966 C Sbjct: 694 C 696
>LOC_Os04g29250:12004.t02618:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1629 Score = 269 bits (581), Expect = 5e-71 Identities = 114/242 (47%), Positives = 158/242 (65%) Frame = -3 / +1 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 P P K + T D T YR +VGALQYLTLTRPD+S+AV +VC +H+P V Sbjct: 865 PAPTPIDTKAKVSSTTGQPYSDPTFYRSIVGALQYLTLTRPDLSYAVQQVCLHMHSPRDV 1044 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLI 1217 H+T KRI+RYV+ T + GL +S + ++A+S+ DWAGC D RRST GF +FFG + Sbjct: 1045 HWTLVKRILRYVRGTTHKGLQLRRSSTPSLTAYSDVDWAGCPDTRRSTSGFCVFFGDSSE 1224 Query: 1216 SWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLS 1037 SWS+++Q+ VSRSS EA Y+ +ANA AE W++ +L EL +K K +CDN+ A YLS Sbjct: 1225 SWSSKRQSVVSRSSAEAEYRGVANAAAECCWLRHLLGELHVKLDKATLVYCDNISAVYLS 1404 Query: 1036 ANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLN 857 N + H R KH+E+D HFV E+VA + + I ++ Q+AD TK L T FEDF+ +L Sbjct: 1405 KNPLHHGRAKHVELDVHFVREKVAVGDIRVAHIPTRQQLADIMTKRLPTALFEDFRSSLC 1584 Query: 856 LI 851 ++ Sbjct: 1585 IV 1590 Score = 82.6 bits (174), Expect(2) = 2e-19 Identities = 49/119 (41%), Positives = 61/119 (51%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA AFA+ Y AS L+ +T C L DH+ PK P VER S PAQS E A++ Sbjct: 1307 SAAAFATPRYSASALERDTTDCRLEDHDSEESPKKTQKPDVERRVSGQPAQSTSEYAVSD 1128 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 + RP+ V T IR +V+ T G C T TA + SG VSV+Y APT Sbjct: 1127 GVEERRSCRPLCVVPRT*RRIRFTSVQCTSRGECM*RQTCCTA*DKSGRVSVRYWSAPT 951 Score = 34.1 bits (68), Expect(2) = 2e-19 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G P + ++ + + GVG GLQ RP + S AY S ER Sbjct: 920 GCPVVLETLAFVSIGVGAGLQSARPARSSTSPAYCSCER 804 Score = 50.1 bits (103), Expect(2) = 2e-06 Identities = 19/39 (48%), Positives = 26/39 (66%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTP 1526 LSQE+YA D++ + GL CKP PTP+ + K+S G P Sbjct: 805 LSQEQYAGDVLDRAGLADCKPAPTPIDTKAKVSSTTGQP 921 Score = 23.1 bits (44), Expect(2) = 2e-06 Identities = 8/30 (26%), Positives = 15/30 (50%) Frame = -2 / +3 Query: 1451 YLLCCKQGVLVFTCTNHSSLHSCQAYSKIC 1362 ++LCC G+ +L +C+A +C Sbjct: 990 FVLCCATGLPSHALAAGRALDTCKADPPLC 1079
>LOC_Os12g40050:12012.t03684:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4999 Score = 243 bits (526), Expect(2) = 7e-71 Identities = 106/220 (48%), Positives = 143/220 (65%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D + +R L ALQYLT TRPDI++AV +VC +H P H A K I+ YV+ TL++GL Sbjct: 4289 DPSDFRSLAIALQYLTFTRPDIAYAVQQVCLHMHDPREPHLAALKWILWYVRGTLHLGLV 4468 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 + + A+S++DWAGC D R+ST G+A+F G NLISWS+++Q TVSRSS EA Y A Sbjct: 4469 LRPTAQHELIAYSDADWAGCPDTRKSTSGYAVFLGDNLISWSSKRQNTVSRSSAEAEYHA 4648 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W+ +L EL + +CDN+ A Y+SAN V H RTKHIEID HFV E Sbjct: 4649 VANAVAEASWLHQLLSELQSPLQRATLVYCDNISAVYMSANPVQHQRTKHIEIDLHFVRE 4828 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 VA + + + + Q AD FTK + + F +FK +LN+ Sbjct: 4829 HVALGAVRVLHVPTTSQDADIFTKGVPSSLFTEFKTSLNV 4948 Score = 45.5 bits (93), Expect(2) = 7e-71 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ++Y +++ + G+ CKP TP+ + KLS + G P+ Sbjct: 4160 LFLSQQQYMMEILDRAGMAECKPCSTPVDTNPKLSAVTGDPV 4285 Score = 61.1 bits (127), Expect(3) = 9e-19 Identities = 33/71 (46%), Positives = 40/71 (56%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS C+ SA A A+A Y AS LD +TV L D EMRL P+ A P V+ S P Sbjct: 4701 NSLRSWCSQEASATALATA*YSASALDRDTVFWRLEDQEMRLSPRKTA*PEVDLRVSGQP 4522 Query: 1281 AQSELEKALTS 1313 AQS E A++S Sbjct: 4521 AQSASE*AISS 4489 Score = 40.9 bits (83), Expect(3) = 9e-19 Identities = 25/52 (48%), Positives = 29/52 (55%) Frame = +3 / -2 Query: 1338 RPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 +P + V TY I L A K* G+C HT TA ISG V V+Y*RA R Sbjct: 4464 KPKWRVPRTYQRIHLRAAK*GSRGSCMWRHTC*TA*AISGRVKVRY*RAIAR 4309 Score = 29.9 bits (59), Expect(3) = 9e-19 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 / -1 Query: 968 NSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVT 1066 N KM++ LNV + M D +G V G++IVT Sbjct: 4834 NMFPDKMEVNLNVFGALMLDWVGGHVDGTDIVT 4736 Score = 31.3 bits (62), Expect(2) = 0.010 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = -2 / +1 Query: 1517 SGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEY 1344 SG * G C SV + + Y LCC V +SL Q +C Y+ + Sbjct: 4285 SGSL*FSQPGYCPSVPHFHSSGYCLCCSTSVSPHA*PTGTSLGCPQVDPLVCSRYSPF 4458 Score = 28.6 bits (56), Expect(2) = 0.010 Identities = 32/126 (25%), Positives = 48/126 (38%) Frame = -1 / +3 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCN 1117 L+ TG A + ++ L S GL + PD + P K GC Sbjct: 4506 LMPTGPVARTLASPLLAMRSSLVTTSSPGLPSARTPCPDPVPKLNITPLPTPLQKLPGCT 4685 Query: 1116 PC*RSWV*KALRLPVSGVTMLEPHTCLPI*SFMLEQSTLR*IFILCERELQINSWTFGLF 937 S+ L S VT+ P TC P S + +TLR IL L + + F +F Sbjct: 4686 NSSVSYSPPCSALHWSTVTISVPSTCPPTQSSISAPNTLRLTSILSGNMLPLVLFEFSMF 4865 Query: 936 IQKIKL 919 +++ Sbjct: 4866 QPPLRM 4883 Score = 29.0 bits (57), Expect(2) = 2.8 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK +SISMC V T LAD A LS Sbjct: 4836 ATCSRTKWRSISMCLVR*CWTGLADM*TALILS 4738 Score = 28.6 bits (56), Expect(2) = 2.8 Identities = 15/53 (28%), Positives = 26/53 (49%) Frame = +2 / -1 Query: 1340 TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTS 1498 T ++ +I L +V W M THL+ S +IR+ + ++LK Q + Sbjct: 4462 TQMESTSNIPKDPLEGSQVRFPWVMHVETHLLNSISNIRTSESEVLKGNSQAA 4304
>LOC_Os04g12880:12004.t01110:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3312 Score = 245 bits (529), Expect(2) = 2e-69 Identities = 105/220 (47%), Positives = 147/220 (66%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T + LVGALQYLT TRP+IS+AV +VC +H P H A KRI+RY++ +L++GL+ Sbjct: 1720 DPTDFHSLVGALQYLTFTRPNISYAVQQVCLHMHDPREPHLAALKRILRYIRGSLDMGLH 1899 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 + P+ + +S++DWAGC D RST G+A+F G NL+S S+++Q TVS SS EA Y+A Sbjct: 1900 IQRCPTGDLVVYSDADWAGCPDTWRSTSGYAVFLGDNLVS*SSKRQVTVSCSSAEAEYRA 2079 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AEV W++ +L EL K +CDNV A YLS+N V H TKH+EID HFV E Sbjct: 2080 VANAVAEVTWLRQLLHELHAPPPKATLVYCDNVSAVYLSSNPVQHQWTKHVEIDLHFVRE 2259 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 +VA + + + + AD FTK L + F +F+ +LN+ Sbjct: 2260 KVAIGAIRVLHVPTSS*YADIFTKGLPSLVFTEFRSSLNV 2379 Score = 39.1 bits (79), Expect(2) = 2e-69 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 + L LSQ +Y D++ + G+ CKP TP+ + KL Sbjct: 1592 SGLLLSQRQYCLDILDRAGMTDCKPCTTPVDTASKL 1699 Score = 94.1 bits (199), Expect(2) = 4e-21 Identities = 55/124 (44%), Positives = 69/124 (55%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + +TSA A A+A Y AS L+ +TV L D + RL P+ A P V+R S PAQS E Sbjct: 2111 SQVTSATALATARYSASALEQDTVTWRLED*DTRLSPRKTA*PEVDRHVSGQPAQSASE* 1932 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 S G +RPI Y IRL+A +* G+C HT TA E+ GLV V+Y R Sbjct: 1931 TTRSPVGHRCMWRPISREPRMYRRIRLSAAR*GSRGSCMWRHTC*TA*EMFGLVKVRYWR 1752 Query: 1482 APTR 1493 APTR Sbjct: 1751 APTR 1740 Score = 28.6 bits (56), Expect(2) = 4e-21 Identities = 17/33 (51%), Positives = 20/33 (60%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK*+SIS C V T L ++ A TLS Sbjct: 2267 ATFSRTK*RSISTCLVH*CCTGLEER*TALTLS 2169
>LOC_Os11g39170:12011.t03460:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5001 Score = 241 bits (521), Expect(2) = 2e-68 Identities = 101/218 (46%), Positives = 145/218 (66%) Frame = -3 / +1 Query: 1507 TKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFS 1328 T +R L ALQYLT TRPDI++AV +VC +H P H A RI+RYV+ L++GL+ Sbjct: 4342 TDFRSLTRALQYLTFTRPDIAYAVQQVCLHMHDPREPHLAALTRILRYVRGMLDLGLHIQ 4521 Query: 1327 KSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALA 1148 S +T +S++DWAGC D RRST G+A+F G NL+SWS+++Q TVS SS++A Y+A+A Sbjct: 4522 PSAATEPVVYSDADWAGCPDTRRSTLGYAVFLGDNLVSWSSKRQVTVSHSSVDAKYRAVA 4701 Query: 1147 NATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERV 968 NA A+V W++ +L EL K +CDNV A YLS+N + H +TKHI+I+ HFV ++V Sbjct: 4702 NAVAKVAWLRQLLHELHSPPPKATLVYCDNVSAVYLSSNPMQHQQTKHIKINLHFVCKKV 4881 Query: 967 ANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 A + + + + Q AD FT L + F F+ +LN+ Sbjct: 4882 AVGAIRVLHVPTSSQYADIFTMGLPSPIFSKFRSSLNV 4995 Score = 39.6 bits (80), Expect(2) = 2e-68 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 ++L LSQ +Y D+ + G CKP TP+ ++ K S + P+ Sbjct: 4201 SSLLLSQRQYCLDIRDRAGKTNCKPCTTPIDTSAKHSATDDAPV 4332 Score = 91.3 bits (193), Expect = 2e-17 Identities = 52/124 (41%), Positives = 69/124 (55%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 +H T A A A+A Y AS L+ +TV C L D + +L P+ A P VERL S PAQS E Sbjct: 4727 SHATLATALATARYLASTLEWDTVTCRLEDQDTKLSPRKTA*PNVERLVSGQPAQSASE* 4548 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 SV D +RP ++ TY IR+ A + +G+C T +TA +SG V V+Y* Sbjct: 4547 TTGSVAADGWMWRPRSNMPRTYRRIRVRAARCGSLGSCIWRQTCWTA*AMSGRVKVRY*S 4368 Query: 1482 APTR 1493 A R Sbjct: 4367 ALVR 4356
>LOC_Os01g65290:12001.t05895:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2504 Score = 231 bits (498), Expect(2) = 3e-68 Identities = 93/183 (50%), Positives = 127/183 (69%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR + GALQYLT TRPDI++AV ++C +H P H KR++RY++ TL G+ Sbjct: 1914 DPTAYRSMAGALQYLTFTRPDIAYAVQQICLHMHDPREGHLNLVKRVLRYIEGTLCHGIL 2093 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 S S ++A+S++DWAGC D RRS GF +F G NL+SWSA++Q TVSRSS EA Y+A Sbjct: 2094 LSASSPHELTAYSDADWAGCPDTRRSMSGFCVFLGSNLLSWSAKRQPTVSRSSAEAEYRA 2273 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +ANA AE W++ +L+EL + +CD++ A Y+SAN V H +TKHI++D HFV E Sbjct: 2274 VANAVAETTWIRQLLRELHQPLHRATVVFCDSISAVYMSANPVQHQQTKHIKLDLHFVRE 2453 Query: 973 RVA 965 RVA Sbjct: 2454 RVA 2462 Score = 49.6 bits (102), Expect(2) = 3e-68 Identities = 19/40 (47%), Positives = 26/40 (65%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L QEKYATDL+ + G+ CKP TP+ ++ KLS G + Sbjct: 1791 LHQEKYATDLLDRAGMTSCKPCSTPVDTSSKLSSAVGAAV 1910 Score = 86.8 bits (183), Expect(3) = 2e-22 Identities = 52/129 (40%), Positives = 67/129 (51%) Frame = +3 / -2 Query: 1128 MTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKAL 1307 + SA A A+A Y AS LD ETV LAD + +L P+ P ++R S HPAQS E A+ Sbjct: 2299 VVSATALATARYSASALDRETVGWRLADQDSKLEPRKTQKPDIDRRVSGHPAQSASE*AV 2120 Query: 1308 TSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAP 1487 +S + + P SV R K* G+C H TA +SGLV+V+Y RAP Sbjct: 2119 SSCGDEADRSMP*QSVPSI*RRTRFTRFK*PSRGSCMCRHICCTAYAMSGLVNVRYWRAP 1940 Query: 1488 TRHLYLVVS 1514 Y V S Sbjct: 1939 AMLRYAVGS 1913 Score = 29.5 bits (58), Expect(3) = 2e-22 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 P+ D+ + GV GL P +SVAYFS* R Sbjct: 1900 PTAEDNLDEVSTGVEHGLHDVMPARSRRSVAYFS*CR 1790 Score = 28.1 bits (55), Expect(3) = 2e-22 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQ 1070 AT S TK +S MCFV T LAD A LS + Sbjct: 2461 ATRSRTKCRSSLMCFVCWCCTGLADM*TAEMLSQK 2357
>LOC_Os11g43230:12011.t03853:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3569 Score = 257 bits (556), Expect = 1e-67 Identities = 104/166 (62%), Positives = 130/166 (78%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+QEKYA DL+K+ + CKP TPLS +EKL+L EG+P+ D T+YR +VGALQ Sbjct: 3060 NGILLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQ 3239 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+++VNKVC FLHAPTT H+T KRI+RY+ ++ LN KS STLV +S Sbjct: 3240 YLTLTRPDIAYSVNKVCQFLHAPTTDHWTVVKRILRYLNQCTSLRLNIHKSASTLVHGYS 3419 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 ++DWAG +DDR+STGGFA+F G NL+SWSARKQ TVSRSS EA YK Sbjct: 3420 DADWAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYK 3557 Score = 77.6 bits (163), Expect(2) = 5e-29 Identities = 41/77 (53%), Positives = 50/77 (64%) Frame = +3 / -2 Query: 1359 FTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPS 1538 F YL+I V+ +VVGA +N* TLFT ISGLV VKY +APT LY V S G PS Sbjct: 3355 FRYLSILFTTVQWSVVGA*RN*QTLFTE*AISGLVKVKYCKAPTILLY*VASLGPNGDPS 3176 Query: 1539 MRDSFSVLDKGVGVGLQ 1589 R +FS+ ++GV GLQ Sbjct: 3175 YRVNFSLTERGVLTGLQ 3125 Score = 71.6 bits (150), Expect(2) = 5e-29 Identities = 33/54 (61%), Positives = 38/54 (70%) Frame = +3 / -2 Query: 1158 LYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVE 1319 LY AS+LDL+TV CFLA H+ RL P+ ANPPV+ LSS PAQS E T VE Sbjct: 3556 LYSASVLDLDTVGCFLALHDTRLEPRKTANPPVDFLSSMLPAQSASEYP*TRVE 3395 Score = 68.4 bits (143), Expect = 1e-10 Identities = 41/109 (37%), Positives = 61/109 (55%) Frame = +2 / -1 Query: 1187 NSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHI 1366 +S LF P*++IR++K KP+C* S+I A+CPV I S +K R L I + + + Sbjct: 3527 HSRLFPCTP*HKIRTQKNSKPSC*FSIIYATCPVCI*ISMNKSRSTLMYIKS*TCALV*V 3348 Query: 1367 SYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 S Y C + M +LT+L+Y IR + Q+L ST TS+ S + Sbjct: 3347 SKYPFHYCPMVSCGSMKELTNLIYRISYIRPSQSQVL*STNYTSILSCI 3201 Score = 43.7 bits (89), Expect = 0.004 Identities = 22/53 (41%), Positives = 30/53 (56%) Frame = -2 / +2 Query: 1319 FYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRV 1161 FY+C F RLGR R* NR VC *S M C +T++C ++ +R R+ Sbjct: 3395 FYSCSWIFRCRLGR*HR**KINRRVCCFSGF*SCVMECKETTYCVKVKYRSRI 3553 Score = 36.8 bits (74), Expect = 0.45 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -1 / +1 Query: 1293 IQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTR 1156 +QTGQ A*M + QQ GL +F LI HG+ N L +Q R Sbjct: 3421 MQTGQVA*MIENQQEGLLFFWVLILCHGVQGNNLLCQGQVQKQNIR 3558
>LOC_Os10g11280:12010.t00929:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4305 Score = 194 bits (419), Expect(2) = 3e-67 Identities = 79/111 (71%), Positives = 95/111 (85%) Frame = -3 / +1 Query: 1459 RPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWA 1280 RPDISF VNKVC FLH PT H+ A KRI+RY+K ++++GL ++S STLVSAFS++DWA Sbjct: 3961 RPDISFVVNKVCQFLHGPTLQHWMAVKRILRYIKSSIDLGLRINRSSSTLVSAFSDADWA 4140 Query: 1279 GCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVI 1127 G +DDRRSTGGFA+F G NL+SWSARKQATVS+SS EA YKA+ANATAEVI Sbjct: 4141 GSVDDRRSTGGFAVFLGSNLVSWSARKQATVSKSSTEAEYKAVANATAEVI 4293 Score = 82.6 bits (174), Expect(2) = 3e-67 Identities = 32/56 (57%), Positives = 43/56 (76%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 L+QEKYA+DL+K+ G+ GCKP TP+S+TEKLS G+ + D TKYR +VGAL+ Sbjct: 3796 LTQEKYASDLLKRAGMSGCKPVATPMSTTEKLSAHSGSVLGEQDATKYRSIVGALR 3963 Score = 141 bits (302), Expect(2) = 6e-43 Identities = 67/110 (60%), Positives = 78/110 (70%) Frame = +3 / -2 Query: 1128 MTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKAL 1307 +TSAVAFA+ALY AS+LDL+TVACFLA H+ R P+ A PPV+ LSS PAQS EKAL Sbjct: 4292 ITSAVAFATALYSASVLDLDTVACFLALHDTRFEPRKTAKPPVDLLSSTDPAQSASEKAL 4113 Query: 1308 TSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISG 1457 T VE DLL +P YL+I L A++ VG CKN* TLFT KEISG Sbjct: 4112 TRVEEDLLILKPRSIEDLIYLSILLTAIQCCKVGPCKN*QTLFTTKEISG 3963 Score = 54.7 bits (113), Expect(2) = 6e-43 Identities = 28/53 (52%), Positives = 31/53 (58%) Frame = +3 / -2 Query: 1479 RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 +APT LYLV S P D+FSV+D GV GL P P F KS AYFS* Sbjct: 3959 KAPTILLYLVASCSPNTEPL*ADNFSVVDIGVATGLHPDIPALFNKSDAYFS* 3801 Score = 71.2 bits (149), Expect(2) = 7e-15 Identities = 37/105 (35%), Positives = 56/105 (53%) Frame = -2 / +3 Query: 1451 YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMP 1272 Y LC K + V + ++L ++I + W K Q+ F++C CFF* RLGR+ Sbjct: 3969 YFLCSK*SLSVLAWSYFTALDGS*EDTEIY*VFY*SWFKD*QIFFHSC*CFF*CRLGRIS 4148 Query: 1271 R*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS 1137 R* +R +C+ W S M C KT + Q+ +RG + + KCHS Sbjct: 4149 R**KIHRRLCSFPWFKSGVMECQKTGYSIQVKYRG*I*SSCKCHS 4283 Score = 30.4 bits (60), Expect(2) = 7e-15 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTIS 1542 SRK+C L KK W R+ ++++ +RK +S Sbjct: 3801 SRKVCV*LVKKGWYVRMQACCYTYVYHRKIVS 3896 Score = 78.5 bits (165), Expect = 1e-13 Identities = 43/105 (40%), Positives = 59/105 (56%) Frame = +2 / -1 Query: 1139 CGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCR 1318 CGIC C + L G LFS P*++I +K+ CK +C +S+I S P+ IRKST+K Sbjct: 4281 CGICNCFIFSLCT*LGYCSLFSGTP*HQI*TKENCKASCGSSIIY*SGPICIRKSTNKSG 4102 Query: 1319 RGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDI 1453 R *T I R +IS Y L + M +LT+ +Y KG+I Sbjct: 4101 RRSVNP*TKINRRLNISQYPLNCHPML*SRTMQELTNFIYYKGNI 3967 Score = 48.7 bits (100), Expect = 1e-04 Identities = 32/78 (41%), Positives = 42/78 (53%) Frame = -1 / +2 Query: 1371 *DM*NIR*ILV*ISASPLLHL*VLFLIQTGQDA*MTDVQQVGLQYFLDLISFHGLLENKP 1192 *D+ ++ ILV* L L VLFL+Q G D *M + Q LQ+ L I HG+ EN+ Sbjct: 4049 *DILSLLLILV*GLTDLLPLLLVLFLMQIGPDQ*MIEDPQEALQFSLVQIWCHGVPENRL 4228 Query: 1191 LFPDLASRQGTRH*QMPQ 1138 +P R + QMPQ Sbjct: 4229 QYPSQVQRLNIKQLQMPQ 4282
>LOC_Os07g15560:12007.t01419:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1518 Score = 227 bits (490), Expect(2) = 4e-67 Identities = 93/181 (51%), Positives = 125/181 (69%) Frame = -3 / +1 Query: 1507 TKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFS 1328 T YR L G LQYLT T P+IS+A+ +VC +H P H A KRI+RY++ T ++GL+ Sbjct: 934 TDYRSLAGTLQYLTFTWPNISYAIQQVCLHMHDPREPHLAALKRILRYLRGTPDLGLHIR 1113 Query: 1327 KSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALA 1148 +S ++A+S++DWAGC D R+ST G+A+F G NL+SWS+++Q TVS SS EA Y+A+A Sbjct: 1114 RSTPVDLTAYSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQHTVSCSSAEAEYRAVA 1293 Query: 1147 NATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERV 968 NA AE W+Q +L EL S + +CDNV YLS N V H RTKH+EID HFV + V Sbjct: 1294 NAVAETTWLQQLLHELHTPPSHSTLVYCDNVSVVYLSTNPVQHQRTKHVEIDLHFVRDCV 1473 Query: 967 A 965 A Sbjct: 1474 A 1476 Score = 49.6 bits (102), Expect(2) = 4e-67 Identities = 16/44 (36%), Positives = 29/44 (65%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L+LSQ +Y +++ + G+ CKP TP+ + KLS ++G P+ Sbjct: 793 SGLYLSQRQYCLEILDRAGMSDCKPCATPVDTNAKLSAVDGAPV 924 Score = 76.7 bits (161), Expect(3) = 5e-17 Identities = 47/124 (37%), Positives = 62/124 (50%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + + SA A A+A Y AS L+ +TV DHE RL P+ A P V+ L S PAQS E Sbjct: 1319 SQVVSATALATARYSASALEQDTVCWRFEDHETRLSPRKTA*PEVDFLVSGQPAQSASE* 1140 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 A+ S + +RP V +R A + G+C HT A E+ G V V+Y R Sbjct: 1139 AVRSTGVERRMWRPRSGVPRR*RKMRFRAARCGSRGSCM*RHTCCMA*EMLGQVKVRYCR 960 Query: 1482 APTR 1493 P R Sbjct: 959 VPAR 948 Score = 24.9 bits (48), Expect(3) = 5e-17 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRP 1601 G PS D+ +++ GV GLQ P Sbjct: 920 GAPSTADNLALVSTGVAHGLQSDMP 846 Score = 24.4 bits (47), Expect(3) = 5e-17 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK +SIS C V T L ++ TLS Sbjct: 1475 ATQSRTKCRSISTCLVR*CCTGLVER*TTLTLS 1377 Score = 32.7 bits (65), Expect = 7.8 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +2 / -1 Query: 1277 SCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIR 1456 +CPV +R R G + T ++ I+ L S ++ M HL+Y ++R Sbjct: 1164 TCPVSVRVGGEIDRSGTPNVETEVRSAAEIAQDAL*SGKMRLPRVMHVKAHLLYGIRNVR 985 Query: 1457 SCKCQILKSTYQTSV 1501 + QIL+S +T+V Sbjct: 984 PGEGQILQSAGKTTV 940
>LOC_Os04g34650:12004.t03140:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4462 Score = 254 bits (550), Expect = 1e-66 Identities = 112/239 (46%), Positives = 150/239 (62%) Frame = -3 / +2 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 PT + L D T+YR L ALQYLTLTRP+I++AV +VC F+H P Sbjct: 3704 PTATPVDARAKLSASEGAPVADPTEYRSLADALQYLTLTRPEIAYAVQQVCRFMHDPHEP 3883 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLI 1217 H KRI+RY+K +L+ GL+ P ++A+S++DWAGC D RRST G+ IF G NL+ Sbjct: 3884 HLALVKRIMRYIKGSLSAGLHIGTGPVGSLTAYSDADWAGCPDSRRSTSGYCIFLGDNLV 4063 Query: 1216 SWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLS 1037 SWS+++Q TVSRSS EA Y+A+A+A AE ++ +L+EL S T +CDNV A Y++ Sbjct: 4064 SWSSKRQTTVSRSSAEAEYRAVAHAIAECCCLRQLLQELHAPISTTTVVFCDNVSAAYMT 4243 Query: 1036 ANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 AN V H TKHIEID HFV E+VA + + + S Q D TK L Q F DF+ +L Sbjct: 4244 ANPVHHRCTKHIEIDIHFVREKVALGQVRVLHVPSTHQFPDFMTKGLPVQLFTDFRSSL 4420 Score = 117 bits (251), Expect = 2e-25 Identities = 78/183 (42%), Positives = 95/183 (51%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK SISMC V T LA A TLS + V+E+ NS+S SA+A Sbjct: 4314 ATFSRTKWMSISMCLVQRW*TGLAVM*AALTLSQKTTVVVEMGACNSWSSWRRQQHSAIA 4135 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+A Y AS L+ ETV C L D + RL P+ + P VER S PAQS E A+ G Sbjct: 4134 *ATARYSASALERETVVCRLEDQDTRLSPRKMQ*PEVERRESGQPAQSASE*AVRDPTGP 3955 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYL 1505 + +RP S +RL +* G+C HT TA ISG V V+Y RA R LY Sbjct: 3954 VPMWRPAESDPLM*RMMRLTKAR*GS*GSCIKRHTC*TA*AISGRVRVRYWRASARLLYS 3775 Query: 1506 VVS 1514 V S Sbjct: 3774 VGS 3766 Score = 48.3 bits (99), Expect = 2e-04 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ +YA DL+++ G+ PT TP+ + KLS EG P+ Sbjct: 3638 LFLSQRQYAVDLLQRAGMSEYHPTATPVDARAKLSASEGAPV 3763
>LOC_Os12g03850:12012.t00276:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2767 Score = 203 bits (438), Expect(3) = 2e-66 Identities = 84/136 (61%), Positives = 106/136 (77%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYL 1469 L LSQE+Y T+L+++ + CKP TPLS+ EKLS+ G + D T+YR +VGALQYL Sbjct: 1873 LLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSIVGALQYL 2052 Query: 1468 TLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNS 1289 TLTRPDIS++VNKVC FL PTT H++A KRI+RY+K TL++GL KS S LVSAFS++ Sbjct: 2053 TLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSDA 2232 Query: 1288 DWAGCLDDRRSTGGFA 1241 DWAG +DDRRSTGGFA Sbjct: 2233 DWAGSVDDRRSTGGFA 2280 Score = 46.9 bits (96), Expect(3) = 2e-66 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = -2 / +3 Query: 1268 *QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMG 1122 *Q R C +FW * FM C + SHC +*+ RV TS C S*+++G Sbjct: 2280 *QEIYRGFCCVFW**LDFMECKEASHCLTV*Y*SRV*STS*CSS*NYLG 2426 Score = 43.2 bits (88), Expect(3) = 2e-66 Identities = 24/71 (33%), Positives = 36/71 (50%) Frame = -2 / +3 Query: 1037 CQSSLSC*NKAH*DRFSFCVRESCK*TLGHSVYSFKRSSC*WVYKSFTYTKF*RLQT*SQ 858 C+ +SC ++ H* SFC S +G++ RS C*W +++ + R T SQ Sbjct: 2511 CKPRVSCSDETH*S*LSFCA*TSSSEIVGYTFCELTRSGC*WFHETNFSSAVDRFSTQSQ 2690 Query: 857 LDKVVIKEGC* 825 VVI+ C* Sbjct: 2691 SW*VVIEGEC* 2723 Score = 249 bits (538), Expect = 4e-65 Identities = 106/152 (69%), Positives = 120/152 (78%) Frame = -3 / +1 Query: 1279 GCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKEL 1100 G DRRSTGGFA+FFG NLISWSARKQATVSRSS EA YKALANA AE+IWV+ +L EL Sbjct: 2269 GGFADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTEL 2448 Query: 1099 GIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQV 920 GI WCDN+GATY++AN VFHARTKHIE+D+HFV E+VA KLLDI F+ S+DQV Sbjct: 2449 GILHPNAARLWCDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLLDIHFVSSQDQV 2628 Query: 919 ADGFTKALRTQSFEDFKHNLNLIKL*LRKGVK 824 ADGFTK + Q F+HNLNL KL*LR VK Sbjct: 2629 ADGFTKPISLQQLIGFRHNLNLGKL*LRGSVK 2724 Score = 126 bits (269), Expect(2) = 3e-40 Identities = 68/133 (51%), Positives = 76/133 (57%) Frame = +3 / -3 Query: 1242 ANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN 1421 A PPV+ LSS PAQS EKALT + DL P V F YL I L A +* VVG CKN Sbjct: 2279 AKPPVDLLSSTDPAQSASEKALTRFDEDLTILSPRSKVPFKYLKILLTADQ*AVVGVCKN 2100 Query: 1422 *HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRP 1601 *HTLFT +ISGLV V+Y +APT LY V S P D+FS +DKGV GL Sbjct: 2099 *HTLFTE*DISGLVKVRYCKAPTILLYCVTSLGPNSSPISTDNFSAVDKGVLTGLHDVIL 1920 Query: 1602 GFFTKSVAYFS*E 1640 SV Y S E Sbjct: 1919 TLSRSSVVYLSCE 1881 Score = 66.6 bits (139), Expect(2) = 3e-40 Identities = 35/96 (36%), Positives = 55/96 (57%) Frame = +2 / -2 Query: 800 YNSNRTSLFNTLP*SQLYQVEIMFEVFKTLCT*SFCKPISNLIF*MNKPNVQEFICNSLS 979 Y + S NT P SQL ++EI+ + ++ L F + ISNLI * +K +Q+F+ + Sbjct: 2748 YT*DNNSYLNTPPQSQLTKIEIVSKTYQLLKRNWFRETISNLIL*AHKMYIQQFLSYLFT 2569 Query: 980 HKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLR 1087 HKM I NV SMK + + + I+TP++ S+R Sbjct: 2568 HKMIINFNVFRPSMKHGVCSHISCTQIITPKSCSIR 2461 Score = 138 bits (296), Expect(2) = 1e-32 Identities = 72/126 (57%), Positives = 82/126 (65%) Frame = +3 / -3 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV PSAT*S E +S + AT S TK* S SMCFV A* T A VAP LSHQ Sbjct: 2645 FVKPSAT*SCELTKCISNNF*ATCSRTK**STSMCFVRA*NTGFAVI*VAPKLSHQSLAA 2466 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L IPNS + T + SA A ASALY AS+LD ETVACFLA HE++L PKN A PPV+ Sbjct: 2465 LGCKIPNSVNNFLTQIISAAALASALYSASVLDRETVACFLALHEIKLSPKNTAKPPVDL 2286 Query: 1263 LSSRHP 1280 LS++ P Sbjct: 2285 LSAKPP 2268 Score = 23.1 bits (44), Expect(2) = 1e-32 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +1 / -1 Query: 1264 CHLGILPSLN*KKHSQ 1311 CH LPSL+ +KH Q Sbjct: 2257 CHQQTLPSLHQRKH*Q 2210 Score = 37.3 bits (75), Expect(3) = 1e-08 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = -1 / +2 Query: 1236 FLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYG 1123 FL + FHG+ +KPL L +Q +H* M QLK +G Sbjct: 2312 FLVIT*FHGVQGSKPLSHGLVLKQSIKH*LMQQLKLFG 2425 Score = 35.0 bits (70), Expect(3) = 1e-08 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -1 / +2 Query: 1023 FMLEQSTLR*IFILCERELQINSWTFGLFIQKIKLLM 913 FML ++TL+ I ILC + N W + L KI+LLM Sbjct: 2525 FMLGRNTLKLIIILCVNK*LRNCWIYIL*AHKIRLLM 2635 Score = 24.9 bits (48), Expect(3) = 1e-08 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -2 / +3 Query: 1313 TCECFF*FRLGRMPR*QTFNRWVC 1242 +C CF * RLGR+ *Q R C Sbjct: 2208 SC*CFL*CRLGRVC**QEIYRGFC 2279 Score = 60.6 bits (126), Expect = 3e-08 Identities = 50/145 (34%), Positives = 63/145 (43%) Frame = +1 / -1 Query: 820 LV*HPSLITTLSS*DYV*SLQNFVYVKLL*THQQLDLLNE*TECPRVYLQLSLTQNENLS 999 L *H ITT *D V +L + * HQQ DL++ P + L QN+N Sbjct: 2728 LS*HSPSITTYQD*DCVENLSTAEEKLVS*NHQQPDLVSSQNVYPTISELLVHAQNDNQL 2549 Query: 1000 QCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLVPCTLPRC* 1179 QC HE Q+ + HT+ + * Y L P * QL H LV TL + * Sbjct: 2548 QCVSSEHETRGLQSYKLHPNYHTKVLQH*DVKYLIQLITFLPK*FQLLH*LVLYTLLQY* 2369 Query: 1180 IWKQWLVF*QTMK*D*VQKILQTHL 1254 +QWL +MK QK Q L Sbjct: 2368 TVRQWLASLHSMKSSYHQKTQQNPL 2294 Score = 48.7 bits (100), Expect = 1e-04 Identities = 21/54 (38%), Positives = 30/54 (55%) Frame = +2 / -2 Query: 1121 HPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASC 1282 +P +FSC I *C + C R +SGL P*N++ +KK+ K C + V C Sbjct: 2427 YPNNFSCCIS*CFILCFSTRP*DSGLLPCTP*NQVITKKHSKTPCRSPVSKTPC 2266
>LOC_Os11g31410:12011.t02739:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 5864 Score = 230 bits (496), Expect(2) = 2e-64 Identities = 100/218 (45%), Positives = 139/218 (63%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR L GALQYLTLT P++++AV +VC F+H P H KRI+RYVK +L GL+ Sbjct: 4507 DPTEYRSLTGALQYLTLTHPELAYAVQQVCLFMHDPR*PHLALVKRILRYVKGSLPAGLH 4686 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 ++A+S++DWAGC D RST G+ +F G NLISWS+++Q TVS SS EA Y+A Sbjct: 4687 IGTGFVKSLTAYSDADWAGCPDSWRSTSGYYVFLGDNLISWSSKRQTTVSYSSAEAKYRA 4866 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +A+A E W++ + +EL +CDNV + Y++AN V H TKH EI+ HFV E Sbjct: 4867 VAHAITECCWLRQLFQELHAPIVSAIVVYCDNVSSIYMTANPVHHRCTKHNEINIHFVRE 5046 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 +VA + + + S Q A+ TK L Q F DF+ +L Sbjct: 5047 KVALGQVHVLHVPSSHQFANIITKGLPMQLFTDFRSSL 5160 Score = 37.7 bits (76), Expect(2) = 2e-64 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ Y DL+++ + PT TP+ + KLS +G P+ Sbjct: 4366 SSDGLFLSQR*YTVDLLQQACMFEFHPTATPVDARAKLSASDGAPV 4503 Score = 74.8 bits (157), Expect(2) = 1e-15 Identities = 51/127 (40%), Positives = 64/127 (50%) Frame = +3 / -1 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 S +A A+A Y AS L+ ETV L D E+RL P+ P VER S PAQS E A+ Sbjct: 4886 SVMA*ATARYLASALE*ETVV*RLEDQEIRLSPRKT**PEVERQESGQPAQSASE*AVRD 4707 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + + + P T +RL + G+C N T TA SG V V+Y RAP R Sbjct: 4706 LTKPVPMWSPAGREPLT*RRMRLTKARWGYRGSCMNRQTC*TA*ASSG*VRVRYCRAPVR 4527 Query: 1494 HLYLVVS 1514 LY V S Sbjct: 4526 LLYSVGS 4506 Score = 29.5 bits (58), Expect(2) = 1e-15 Identities = 18/33 (54%), Positives = 20/33 (60%) Frame = +3 / -1 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK* IS+CFV * T LA + TLS Sbjct: 5054 ATFSRTK*MLISLCFVQR*CTGLAVI*IELTLS 4956
>LOC_Os05g51730:12005.t04598:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1631 Score = 203 bits (437), Expect(2) = 3e-64 Identities = 87/183 (47%), Positives = 117/183 (63%) Frame = -3 / +3 Query: 1408 PTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFG 1229 P H KRI+RY+K +L+ L+ P ++A+S++DWAGC D RST G+ IF G Sbjct: 1041 PREPHLALVKRILRYIKGSLSASLHIGTGPVGSLTAYSDADWAGCPDSHRSTSGYYIFLG 1220 Query: 1228 PNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGA 1049 NL+SWS+++Q TVSRSS EA Y+A+A+ AE W+ +L+EL S T +CDNV A Sbjct: 1221 DNLVSWSSKRQTTVSRSSAEAEYRAVAHMVAECCWLCQLLQELHAPISTTTVVFCDNVSA 1400 Query: 1048 TYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFK 869 Y++AN V H RTKHIEID HFV E+VA + + + S Q AD TK L Q F DF+ Sbjct: 1401 VYMTANPVHHRRTKHIEIDIHFVREKVALGQVRVLHVPSTHQFADIMTKGLPVQIFTDFR 1580 Query: 868 HNL 860 +L Sbjct: 1581 SSL 1589 Score = 64.3 bits (134), Expect(2) = 3e-64 Identities = 27/60 (45%), Positives = 36/60 (60%) Frame = -3 / +1 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 PT + L D T+YR L GALQYLTLTRP+I++AV +VC F+H P ++ Sbjct: 874 PTATPVDARAKLSASEGAPVADPTEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHDPASL 1053 Score = 81.7 bits (172), Expect(2) = 2e-20 Identities = 53/125 (42%), Positives = 66/125 (52%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK SISMC V T LA A TLS + V+E+ NS+S + SA Sbjct: 1483 ATFSRTKWISISMCLVRRW*TGLAVM*TALTLSQKTTVVVEMGACNSWSSWQSQQHSATM 1304 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+A Y AS L+ ETV C L D + RL P+ + P VER S PAQS E A+ G Sbjct: 1303 *ATARYSASALERETVVCRLEDQDTRLSPRKM**PEVER*ESGQPAQSASE*AVRDPTGP 1124 Query: 1326 LLKFR 1340 + +R Sbjct: 1123 VPMWR 1109 Score = 38.6 bits (78), Expect(2) = 2e-20 Identities = 20/38 (52%), Positives = 23/38 (60%) Frame = +3 / -1 Query: 1401 VVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 + G+C HT TA ISG V V+Y RAP R LY V S Sbjct: 1049 LAGSCIKRHTC*TA*AISGRVRVRYWRAPARLLYSVGS 936 Score = 50.1 bits (103), Expect = 4e-05 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ +Y DL+++ G+ C PT TP+ + KLS EG P+ Sbjct: 808 LFLSQRQYTVDLLQRAGMFECHPTATPVDARAKLSASEGAPV 933
>LOC_Os11g44780:12011.t04006:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3543 Score = 219 bits (472), Expect(2) = 5e-64 Identities = 90/209 (43%), Positives = 139/209 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H RI+RY+K + Sbjct: 2851 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGK 3030 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ F K+ V + ++DW CLDDRRST G+ +F G NL+SW ++KQ+ VSRS+ EA Sbjct: 3031 GIWFKKNGHLDVEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKQSVVSRSTAEAE 3210 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y++++ + +E++W++++L EL + +S + WCDN A ++ N V H RTKH+EID F Sbjct: 3211 YRSMSMSLSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFF 3390 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + ER+ L++ F++S +QVAD TKAL Sbjct: 3391 IKERMDEGTLNLGFVNSGEQVADSLTKAL 3477 Score = 47.3 bits (97), Expect(2) = 5e-64 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 2740 LSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVN 2862 Score = 70.7 bits (148), Expect(2) = 2e-15 Identities = 50/141 (35%), Positives = 63/141 (44%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S LY AS ++ +T CFL + +L P N P V+ LSSR Sbjct: 3272 NSAKRFFNHNNSLKLIDIDLYSASAVERDTTDCFLLLQDTKLPPINTQ*PDVDLLSSRQL 3093 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 QS + TS L P+ + F YL I * ++G+C T TA ISGL Sbjct: 3092 PQSASQYPSTSRCPFFLNHMPLPGLAFKYLKILYTTSM*PLLGSCMYRLTTLTA*VISGL 2913 Query: 1461 VSVKY*RAPTRHLYLVVSTES 1523 V KY PT YL + T S Sbjct: 2912 V*HKYINLPTSL*YLSLLTGS 2850 Score = 32.7 bits (65), Expect(2) = 2e-15 Identities = 24/56 (42%), Positives = 29/56 (51%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 AFV SAT S E K + LS K +SIS CFV + T L ++A LSH Sbjct: 3473 AFVKLSATCSPEFTKPKFKVPSSILSLIKKRSISTCFVRSCWTGLLAIFMADLLSH 3306
>LOC_Os07g36710:12007.t03340:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2412 Score = 219 bits (472), Expect(2) = 5e-64 Identities = 90/209 (43%), Positives = 139/209 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H RI+RY+K + Sbjct: 1720 DPVNKKRYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGK 1899 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ F K+ V + ++DW CLDDRRST G+ +F G NL+SW ++KQ+ VSRS+ EA Sbjct: 1900 GIWFKKNGHLDVEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKQSVVSRSTAEAE 2079 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y++++ + +E++W++++L EL + +S + WCDN A ++ N V H RTKH+EID F Sbjct: 2080 YRSMSMSLSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFF 2259 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + ER+ L++ F++S +QVAD TKAL Sbjct: 2260 IKERMDEGTLNLGFVNSGEQVADSLTKAL 2346 Score = 47.3 bits (97), Expect(2) = 5e-64 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 1609 LSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVN 1731 Score = 71.2 bits (149), Expect(2) = 1e-15 Identities = 50/141 (35%), Positives = 63/141 (44%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S LY AS ++ +T CFL + +L P N P V+ LSSR Sbjct: 2141 NSAKRFFNHNNSLKLIDIDLYSASAVERDTTDCFLLLQDTKLPPINTQ*PDVDLLSSRQL 1962 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 QS + TS L P+ + F YL I * ++G+C T TA ISGL Sbjct: 1961 PQSASQYPSTSRCPFFLNHMPLPGLAFKYLKILYTTSM*PLLGSCMYRLTTLTA*VISGL 1782 Query: 1461 VSVKY*RAPTRHLYLVVSTES 1523 V KY PT YL + T S Sbjct: 1781 V*HKYINLPTSL*YLFLLTGS 1719 Score = 32.7 bits (65), Expect(2) = 1e-15 Identities = 24/56 (42%), Positives = 29/56 (51%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 AFV SAT S E K + LS K +SIS CFV + T L ++A LSH Sbjct: 2342 AFVKLSATCSPEFTKPKFKVPSSILSLIKKRSISTCFVRSCWTGLLAIFMADLLSH 2175
>LOC_Os06g49350:12006.t04619:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 7164 Score = 216 bits (467), Expect(2) = 2e-63 Identities = 95/226 (42%), Positives = 140/226 (61%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H RI+RY+K T Sbjct: 4075 DPVDRETYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGK 4254 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G N++ W ++KQA V+RS+ EA Sbjct: 4255 GLWFRKNQHLDVEGYCDADWASSVDDRRSTSGYCVFVGGNVVCWRSKKQAVVARSTTEAE 4434 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++WV+++L EL + + T CDN A ++ N V H RTKHIEID F Sbjct: 4435 YRAMALSLSEMLWVKNLLLELRLFRNNTVVLHCDNKSAINIANNPVQHDRTKHIEIDRFF 4614 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ N L +++I S +Q+AD TK L E + + +I + Sbjct: 4615 IKEKIDNGALRLQYIKSSEQLADCLTKGLGPSESESMCNKMGMIDI 4752 Score = 47.8 bits (98), Expect(2) = 2e-63 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ + G+ GC+ + TP+ +LS G P+D Sbjct: 3964 LSQRKYVLDLLTETGMLGCRTSATPIDRNHQLSAQSGDPVD 4086 Score = 91.8 bits (194), Expect(2) = 4e-19 Identities = 65/166 (39%), Positives = 81/166 (48%) Frame = +3 / -2 Query: 993 SISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPAS 1172 SIS+C V + T L +A LS VL L +S + TH S A ALY AS Sbjct: 4604 SISICLVRSC*TGLFAMLIADLLSQ*STTVLFLNNRSSNNRFFTHNISLKLNAMALYSAS 4425 Query: 1173 MLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFS 1352 ++D T ACFL + L P N P V+ LSS AQS + TS L P+ Sbjct: 4424 VVDRATTACFLLRQQTTLPPTNTQYPDVDLLSSTLLAQSASQYPSTSKCWFFLNHNPLPG 4245 Query: 1353 VCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 V F YL I +* V+G+C T TA EISGLV +Y + PT Sbjct: 4244 VPFKYLKIL*TTSR*VVLGSCIYLLTTLTA*EISGLVWHRYIKRPT 4107 Score = 24.0 bits (46), Expect(2) = 4e-19 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P KS YF *ER Sbjct: 4085 STGSPDCALNW*FLSMGVALVRHPSIPVSVNKSRTYFL*ER 3963
>LOC_Os12g24160:12012.t02145:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3978 Score = 243 bits (525), Expect = 3e-63 Identities = 98/152 (64%), Positives = 122/152 (80%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N + L+Q+KYATDL+KK G+ CKP TP+S +EKLS+ EG+ + D T++R +VGALQ Sbjct: 3520 NGIVLTQDKYATDLLKKVGMMNCKPVTTPMSVSEKLSVHEGSLLGPNDATQFRSIVGALQ 3699 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDI+F+VNKVC FLH PTTVH+ A KRI+RY+K +GLN KS STLVS FS Sbjct: 3700 YLTLTRPDIAFSVNKVCQFLHTPTTVHWAAVKRILRYLKSCTKMGLNIHKSGSTLVSGFS 3879 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARK 1199 ++DWAG +DDRRSTGGFAIF G NL+SW+ARK Sbjct: 3880 DADWAGSIDDRRSTGGFAIFIGSNLVSWNARK 3975 Score = 143 bits (307), Expect = 3e-33 Identities = 79/145 (54%), Positives = 85/145 (58%) Frame = +3 / -2 Query: 1200 FLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIR 1379 FLA H+ RL P IANPPV+ LSS PAQS E LT V+ DL F PI F YL I Sbjct: 3974 FLAFHDTRLEPIKIANPPVDLLSSMLPAQSASENPLTRVDPDLCIFSPILVHDFKYLRIL 3795 Query: 1380 LAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSV 1559 A + TVVG +N* TL T ISGLVSVKY APT L V S PS DSFS+ Sbjct: 3794 FTAAQCTVVGV*RN*QTLLTENAISGLVSVKYCNAPTMLLN*VASLGPKRDPSCTDSFSL 3615 Query: 1560 LDKGVGVGLQPCRPGFFTKSVAYFS 1634 D GV GLQ P FF KSVAY S Sbjct: 3614 TDIGVVTGLQFIIPTFFNKSVAYLS 3540 Score = 65.2 bits (136), Expect(2) = 3e-12 Identities = 35/93 (37%), Positives = 51/93 (54%) Frame = -2 / +3 Query: 1478 SVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECF 1299 ++ DTY T*Y + C+ + V + HS+L SC+ S I E +K+ Q+ ++ Sbjct: 3696 TILDTY*T*YSIFCQ*SLSVSSYPYHSALGSCKKDS*IFEVMY*DGAKYTQIRVHSS*WI 3875 Query: 1298 F*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*K 1200 * RLG R*Q N W+C ++W *S M C*K Sbjct: 3876 L*CRLGW*HR*QKINWWICYLYWF*SSIMEC*K 3974 Score = 27.2 bits (53), Expect(2) = 3e-12 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -2 / +3 Query: 1637 SRKICNRLGKKAWPTRL*THTHSFI*YRKTI 1545 +R IC+R K+ W L*T +S++ KTI Sbjct: 3537 TR*ICHRFIKEGWNDEL*TSHNSYVSK*KTI 3629 Score = 65.7 bits (137), Expect = 9e-10 Identities = 42/94 (44%), Positives = 53/94 (56%) Frame = +2 / -1 Query: 1196 LFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYY 1375 LFSS P* IR+ K K T *+SVI A+ PV IR+ST+ I* ++ IS Sbjct: 3978 LFSSIP*Y*IRTNKDSKSTS*SSVIYATSPVCIRESTN*SGP*FVYI*PHLST*LQISKN 3799 Query: 1376 TLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQIL 1477 SC ++CG M KLT + K IRS KCQ+L Sbjct: 3798 PFYSCPMHCGRGMKKLTDFIDRKCYIRSSKCQVL 3697 Score = 37.3 bits (75), Expect(2) = 4e-04 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = -1 / +2 Query: 1296 LIQTGQDA*MTDVQQVGLQYFLDLISFHGLLEN 1198 L+QTG A*MT+ Q V L L LI +HG+LEN Sbjct: 3878 LMQTGLVA*MTEDQLVDLLSLLVLI*YHGMLEN 3976 Score = 27.6 bits (54), Expect(2) = 4e-04 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 / +2 Query: 1479 FSI*HLQDLISPLL*TRCVSFYMHQPQFTSQL 1384 ++ *HL DLI L + VSF++ PQ QL Sbjct: 3695 YNT*HLLDLI*HFLSIKSVSFFIPLPQCIGQL 3790
>LOC_Os07g25620:12007.t02259:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4273 Score = 220 bits (474), Expect(2) = 3e-63 Identities = 90/165 (54%), Positives = 118/165 (71%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDIS+AV +VC +H P H A KRI+RYV+ TL++GL+ Sbjct: 3776 DPTDYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPRDSHLAALKRILRYVRGTLDLGLH 3955 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +SPST + A+S++DWAGC + R+ST G+A+F G NL+SWS+++Q T+SRSS +A Y+A Sbjct: 3956 IRRSPSTDLVAYSDADWAGCPNTRKSTSGYAVFLGDNLVSWSSKRQHTLSRSSAKAEYRA 4135 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFH 1019 +ANA AE W++ +L EL SK CDNV A YLS N V H Sbjct: 4136 VANAVAETYWLRQLLHELHTPPSKATLVHCDNVSAVYLSTNPVQH 4270 Score = 43.7 bits (89), Expect(2) = 3e-63 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = -3 / +2 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +Y ++++ G+ CKP TP+ + KLS G+P+ Sbjct: 3635 DSSGLLLSQRQYNIEILEHAGMSDCKPCSTPVDTNAKLSSTYGSPV 3772 Score = 101 bits (215), Expect = 2e-20 Identities = 67/156 (42%), Positives = 82/156 (52%) Frame = +3 / -2 Query: 1026 TRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFL 1205 T L ++ A TLS + LE + NS S + SA A A+ALY A L+ + V L Sbjct: 4263 TGLVER*TALTLSQCTKVALEGGVCNSCSNWRSQ*VSATALATALYSALALERDKVC*RL 4084 Query: 1206 ADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLA 1385 D E RL P+N A P V+ PAQS E A SVEG+ P SV TY IRL Sbjct: 4083 EDQETRLSPRNTAYPEVDLRVLGQPAQSASE*ATRSVEGERRMCSPRSSVPRTYRRIRLR 3904 Query: 1386 AVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 A + +G+C T TA EISG V+VKY* AP R Sbjct: 3903 AARCESLGSCMWRQTC*TA*EISGRVNVKY*SAPAR 3796 Score = 42.3 bits (86), Expect = 0.010 Identities = 23/78 (29%), Positives = 33/78 (42%) Frame = -2 / +1 Query: 1505 *IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQ 1326 *+ G C+SV D + Y LCC G+ + + QAY + A W+ Sbjct: 3784 *LSQPGWCTSVLDIHSARYFLCCSAGLSPHA*SQRFASRCSQAYPSVRPRNA*PWTTHSA 3963 Query: 1325 VPFYTCECFF*FRLGRMP 1272 + F F* LGR+P Sbjct: 3964 LSFDRPSGLF*C*LGRLP 4017
>LOC_Os07g10850:12007.t00959:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12538 Score = 214 bits (462), Expect(2) = 6e-63 Identities = 94/226 (41%), Positives = 140/226 (61%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H RI+RY+K T Sbjct: 8196 DPVDRETYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGK 8375 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G N++ W ++KQA V+RS+ EA Sbjct: 8376 GLWFRKNQHLDVEGYCDADWASSVDDRRSTSGYCVFVGGNVVCWRSKKQAVVARSTAEAE 8555 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++WV+++L EL + + T CDN A ++ N V H RTKHIEID F Sbjct: 8556 YRAMALSLSEMLWVKNLLLELRLFRNNTVVLHCDNKSAINIANNPVQHDRTKHIEIDRFF 8735 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + L +++I S +Q+AD TK L E + + +I + Sbjct: 8736 IKEKIDSGALRLQYIKSSEQLADCLTKGLGPSESESMCNKMGMIDI 8873 Score = 48.3 bits (99), Expect(2) = 6e-63 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY +L+K+ G+ GC+ + TP+ +LS G P+D Sbjct: 8085 LSQRKYVLNLLKETGMLGCRTSATPIDRNHQLSAQSGDPVD 8207 Score = 90.9 bits (192), Expect(2) = 6e-19 Identities = 65/166 (39%), Positives = 80/166 (48%) Frame = +3 / -1 Query: 993 SISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPAS 1172 SIS+C V + T L +A LS VL L +S + TH S A ALY AS Sbjct: 8725 SISICLVRSC*TGLFAMLIADLLSQ*STTVLFLNNRSSNNRFFTHNISLKLNAMALYSAS 8546 Query: 1173 MLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFS 1352 +D T ACFL + L P N P V+ LSS AQS + TS L P+ Sbjct: 8545 AVDRATTACFLLRQQTTLPPTNTQYPDVDLLSSTLLAQSASQYPSTSKCWFFLNHNPLPG 8366 Query: 1353 VCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 V F YL I +* V+G+C T TA EISGLV +Y + PT Sbjct: 8365 VPFKYLKIL*TTSR*VVLGSCIYLLTTLTA*EISGLVWHRYIKRPT 8228 Score = 24.4 bits (47), Expect(2) = 6e-19 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 / -1 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P F K YF *ER Sbjct: 8206 STGSPDCALNW*FLSMGVALVRHPSIPVSFNKLRTYFL*ER 8084
>LOC_Os01g71840:12001.t06476:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 15432 Score = 214 bits (462), Expect(2) = 9e-63 Identities = 94/226 (41%), Positives = 140/226 (61%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H RI+RY+K T Sbjct: 4076 DPVDRETYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGK 4255 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G N++ W ++KQA V+RS+ EA Sbjct: 4256 GLWFRKNQHLDVEGYCDADWASSVDDRRSTSGYCVFVGGNVVCWRSKKQAVVARSTAEAE 4435 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++WV+++L EL + + T CDN A ++ N V H RTKHIEID F Sbjct: 4436 YRAMALSLSEMLWVKNLLLELRLFRNNTVVLHCDNKSAINIANNPVQHDRTKHIEIDRFF 4615 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + L +++I S +Q+AD TK L E + + +I + Sbjct: 4616 IKEKIDSGALRLQYIKSSEQLADCLTKGLGPSESESMCNKMGMIDI 4753 Score = 47.8 bits (98), Expect(2) = 9e-63 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ + G+ GC+ + TP+ +LS G P+D Sbjct: 3965 LSQRKYVLDLLTETGMLGCRTSATPIDRNHQLSAQSGDPVD 4087 Score = 90.9 bits (192), Expect(2) = 8e-19 Identities = 65/166 (39%), Positives = 80/166 (48%) Frame = +3 / -1 Query: 993 SISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPAS 1172 SIS+C V + T L +A LS VL L +S + TH S A ALY AS Sbjct: 4605 SISICLVRSC*TGLFAMLIADLLSQ*STTVLFLNNRSSNNRFFTHNISLKLNAMALYSAS 4426 Query: 1173 MLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFS 1352 +D T ACFL + L P N P V+ LSS AQS + TS L P+ Sbjct: 4425 AVDRATTACFLLRQQTTLPPTNTQYPDVDLLSSTLLAQSASQYPSTSKCWFFLNHNPLPG 4246 Query: 1353 VCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 V F YL I +* V+G+C T TA EISGLV +Y + PT Sbjct: 4245 VPFKYLKIL*TTSR*VVLGSCIYLLTTLTA*EISGLVWHRYIKRPT 4108 Score = 24.0 bits (46), Expect(2) = 8e-19 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 / -1 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P KS YF *ER Sbjct: 4086 STGSPDCALNW*FLSMGVALVRHPSIPVSVNKSRTYFL*ER 3964
>LOC_Os08g16270:12008.t01501:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3333 Score = 221 bits (476), Expect(2) = 9e-63 Identities = 92/183 (50%), Positives = 124/183 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T +R L GAL YLT TRPDIS+AV VC +H P H A K+I+RYV+ TL++GL+ Sbjct: 2743 DPTDFRSLAGALPYLTFTRPDISYAVQ*VCLHMHDPRESHLAALKQILRYVRGTLDLGLH 2922 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S + + ++DWAGC D R+ST G+A+F G NL+ WS+++Q TVSRSS EA Y+A Sbjct: 2923 IQRS*AHDFVVYFDADWAGCPDTRKSTSGYAVFLGDNLVPWSSKRQNTVSRSSAEAEYRA 3102 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 +AN AE W+ +L+EL ++ + DNV A YLS+N V H TKH+EID HFV E Sbjct: 3103 VANVVAETSWLHQLLQELHSPPARATLVYYDNVSAVYLSSNPVQHQSTKHVEIDLHFVRE 3282 Query: 973 RVA 965 +VA Sbjct: 3283 KVA 3291 Score = 41.4 bits (84), Expect(2) = 9e-63 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L L Q +Y ++++ G+ CKP TP+ + KLS +G P+ Sbjct: 2602 SNTGLLLHQRQYCLYILERAGMTDCKPCSTPIDTCAKLSSTDGPPV 2739 Score = 65.2 bits (136), Expect(3) = 6e-22 Identities = 32/63 (50%), Positives = 39/63 (61%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 +S+S C+ + SA FA+A Y AS LDLETV L DH RL P+N A P V+ S P Sbjct: 3155 SSWSNWCSQLVSATTFATARYSASALDLETVFWRLEDHGTRLSPRNTA*PDVDLRVSGQP 2976 Query: 1281 AQS 1289 AQS Sbjct: 2975 AQS 2967 Score = 45.5 bits (93), Expect(3) = 6e-22 Identities = 25/53 (47%), Positives = 31/53 (58%) Frame = +3 / -2 Query: 1335 FRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 +RP SV TY I L A + G+C HT +TA E+SGLV V+Y AP R Sbjct: 2921 WRPRSSVPRTYRKICLRAARWDSRGSCMCKHTYWTA*EMSGLVKVRYGSAPAR 2763 Score = 32.2 bits (64), Expect(3) = 6e-22 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 AT S TK +SIS CFVL T L ++ A TLS Sbjct: 3290 ATFSRTKCRSISTCFVL*CCTGLEER*TALTLS 3192 Score = 39.6 bits (80), Expect(2) = 0.017 Identities = 29/91 (31%), Positives = 38/91 (41%) Frame = -1 / +2 Query: 1239 YFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYGCNPC*RSWV*KALRLPVSGVT 1060 Y L IS+HG + L P + QM LK GC C +S + LP +T Sbjct: 3017 YSLVTISYHGPPSARILSPGQVLKPSIELLQMSSLKPAGCTNCSKSCILLQPELPWCIMT 3196 Query: 1059 MLEPHTCLPI*SFMLEQSTLR*IFILCEREL 967 M PI + +ST R I+ C R L Sbjct: 3197 MSVQSISPPIRYSIKVRSTSRLIYTSCVRRL 3289 Score = 25.4 bits (49), Expect(2) = 0.017 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 / +3 Query: 1487 RCSSVFDTYKT*YLLCCKQGVL 1422 R +SV ++ *+LLCC GVL Sbjct: 2769 RSTSVPHLHQA*HLLCCPIGVL 2834 Score = 32.7 bits (65), Expect = 7.8 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = -2 / +3 Query: 1247 VCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS*SHMGAIHAKGVGYKKL*DSLFL 1068 +C I W S MV +C Q+ RV KC *+ + A A + L + Sbjct: 3009 LCCIPW*QSRTMVLQAPEYCLQVKC*SRVSSCCKCRR*NQLAAPIAPRAAFSSSQSYLGV 3188 Query: 1067 V*QCWSHILVCQSSLSC*NKAH*DRFSFCVRESC 966 +*QC + + QS + +A D + E C Sbjct: 3189 L*QCQCSLSLLQSGTASKYEARRD*STLRA*EGC 3290
>LOC_Os04g53960:12004.t04869:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 773 Score = 185 bits (399), Expect(3) = 1e-62 Identities = 79/164 (48%), Positives = 107/164 (65%) Frame = -3 / +3 Query: 1351 LNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSI 1172 L+ GL+ S P ++A+SN+DWA C D RRST G+ +F G N ISWS+++Q TVSRSS Sbjct: 240 LSTGLHISTGPVKSLTAYSNADWASCPDSRRSTSGYYVFLGDNPISWSSKRQTTVSRSSA 419 Query: 1171 EAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEID 992 EA Y+A+A+A AE W++ +L+EL + + DNV A Y++AN V H RTKHIEID Sbjct: 420 EAEYRAVAHAVAECCWLRQLLQELHAPIASATVVYGDNVSAVYMTANPVHHRRTKHIEID 599 Query: 991 FHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 HFV E+VA + + + + S Q D TK L Q F DF+ NL Sbjct: 600 IHFVREKVALRQVHVLHVPSSHQFTDIMTKGLLVQLFTDFRSNL 731 Score = 64.8 bits (135), Expect(3) = 1e-62 Identities = 26/49 (53%), Positives = 33/49 (67%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVR 1367 D T+YR L G LQYLTLTRP++++AV VC F+H P H K I+R Sbjct: 79 DPTEYRSLAGTLQYLTLTRPELAYAVQ*VCLFMHDPREPHLALVKCILR 225 Score = 30.4 bits (60), Expect(3) = 1e-62 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 / +1 Query: 1588 CKPTPTPLSSTEKLSLMEGTPI 1523 C PT TP+ + KLS +G P+ Sbjct: 10 CHPTATPVDARAKLSASDGAPV 75 Score = 57.4 bits (119), Expect(3) = 2e-16 Identities = 32/71 (45%), Positives = 40/71 (56%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS LD ETV L D E+ L P+ P VER S AQS LE A+ Sbjct: 457 SATA*ATARYSASALDRETVV*RLEDQEIGLSPRKT*YPEVERRESGQLAQSALE*AVRD 278 Query: 1314 VEGDLLKFRPI 1346 + G +L + P+ Sbjct: 277 LTGPVLMWSPV 245 Score = 35.9 bits (72), Expect(3) = 2e-16 Identities = 22/35 (62%), Positives = 22/35 (62%) Frame = +3 / -2 Query: 960 LFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 L AT S TK* SISMCFV * T LA A TLS Sbjct: 631 LRATFSRTK*MSISMCFVRR*CTGLAVM*TALTLS 527 Score = 30.9 bits (61), Expect(3) = 2e-16 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = +3 / -1 Query: 1407 GACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 G+C T TA SG V V+Y R P R LY V S Sbjct: 185 GSCMKRQTY*TA*ASSGRVRVRYCRVPARLLYSVGS 78
>LOC_Os12g05290:12012.t00418:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4767 Score = 213 bits (459), Expect(2) = 2e-62 Identities = 93/226 (41%), Positives = 141/226 (62%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H RI+RY+K T Sbjct: 4075 DPVDRETYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTTHLEVVHRILRYLKGTPGK 4254 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G N++ W ++KQA V++S+ EA Sbjct: 4255 GLWFRKNQHLDVEGYCDADWASSVDDRRSTSGYCVFVGGNVVCWRSKKQAVVAQSTAEAE 4434 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++WV+++L EL + + T CDN A ++ N V H RTKHIEID F Sbjct: 4435 YRAMALSLSEMLWVKNLLLELRLFRNNTVVLHCDNKFAINIANNPVQHDRTKHIEIDRFF 4614 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ ++ L +++I S +Q+AD TK L E + + +I + Sbjct: 4615 IKEKIDSRALRLQYIKSSEQLADCLTKGLGPSQSESMCNKMGMIDI 4752 Score = 47.8 bits (98), Expect(2) = 2e-62 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ + G+ GC+ + TP+ +LS G P+D Sbjct: 3964 LSQRKYVLDLLTETGMLGCRTSATPIDRNHQLSAQSGDPVD 4086 Score = 92.3 bits (195), Expect(2) = 3e-19 Identities = 68/179 (37%), Positives = 86/179 (48%) Frame = +3 / -2 Query: 954 KSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMT 1133 ++L + S K SIS+C V + T L +A LS VL L +S + TH Sbjct: 4643 RALLSIFSLMKNLSISICLVRSC*TGLFAMLIANLLSQ*STTVLFLNNRSSNNRFFTHNI 4464 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 S A ALY AS +D T ACFL + L P N P V+ LSS AQS + TS Sbjct: 4463 SLKLNAMALYSASAVD*ATTACFLLRQQTTLPPTNTQYPDVDLLSSTLLAQSASQYPSTS 4284 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 L P+ V F YL I +* V+G+C T TA EISGLV +Y + PT Sbjct: 4283 KCWFFLNHNPLPGVPFKYLKIL*TTSR*VVLGSCIYLLTTLTA*EISGLVWHRYIKRPT 4107 Score = 24.0 bits (46), Expect(2) = 3e-19 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P KS YF *ER Sbjct: 4085 STGSPDCALNW*FLSMGVALVRHPSIPVSVNKSRTYFL*ER 3963
>LOC_Os03g59190:12003.t05168:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4662 Score = 216 bits (466), Expect(2) = 2e-62 Identities = 94/226 (41%), Positives = 141/226 (62%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H +I+RY+K T Sbjct: 3970 DPVDKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGK 4149 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 4150 GLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAE 4329 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++S+L EL + S T CDN A ++ N V H RTKH+EID F Sbjct: 4330 YRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFF 4509 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+AD TK L + + + +I + Sbjct: 4510 IKEKIDSGVLRLEYIKSCEQLADCLTKGLGPSEIQSICNKMGMIDI 4647 Score = 44.6 bits (91), Expect(2) = 2e-62 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+ + TP+ +L G P+D Sbjct: 3859 LSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVD 3981 Score = 88.1 bits (186), Expect = 2e-16 Identities = 77/207 (37%), Positives = 91/207 (43%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV SA+ S + I + + S K SIS C V + T L +A LS V Sbjct: 4589 FVRQSASCSHDLIYSNLSTPLSIFSLMKNLSISTCLVRSC*TGLFAMLMADLLSQ*SITV 4410 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L NS + H S A ALY AS +D T ACFL E RL P N P V+ Sbjct: 4409 SLLSTRNSVNKLLIHNISLKLKAIALYSASAVDRATTACFLLRQETRLPPTNTQ*PDVDL 4230 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS AQS + T L P V F YL I K* V G+C T TA Sbjct: 4229 LSSILLAQSASQYPSTFRCPFFLNHNPFPGVPFRYLRIL*TTSK*PVRGSCIYLLTTLTA 4050 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTES 1523 EISGLV + + PT Y +ST S Sbjct: 4049 *EISGLVWQR*IKRPTSLWYASLSTGS 3969 Score = 35.4 bits (71), Expect = 1.2 Identities = 36/139 (25%), Positives = 60/139 (43%) Frame = +2 / -1 Query: 893 T*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 T* C IS L *+N + N L ++ I L++ + M + + G IVT + Sbjct: 4599 T*PLC*TIS*LFT*LNILQPKHPAINLLLNEEPINLHMFSAIMLNRVVCNADG*FIVTMK 4420 Query: 1073 TGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPT 1252 S+ + ++Q HP + V C R + L + P N+I + K+ Sbjct: 4419 HHSVTS*HSQFSQQAPHPQHLTQAQSHSSVFCFCGRPSHHCLLFASPRNKITTNKHTIT* 4240 Query: 1253 C*TSVI*ASCPV*IRKSTH 1309 C +S+I + P+ I S H Sbjct: 4239 CRSSIIHTTRPISITISFH 4183
>LOC_Os08g29560:12008.t02711:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5390 Score = 210 bits (452), Expect(2) = 3e-62 Identities = 88/207 (42%), Positives = 133/207 (64%) Frame = -3 / +2 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 4565 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 4744 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 4745 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 4924 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 4925 AMSVSLSELLWLRNLLSELKLSVDTPMKLWCDNKSAINIANNPVQHDRTKHVELDRFFIK 5104 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD TK L Sbjct: 5105 EKLDEGVLELEFVTSSGQVADCLTKGL 5185 Score = 50.6 bits (104), Expect(2) = 3e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 4448 LSQRKYALDLLSDTGMLGCRPASTPIDQNHKLCAQSGNPVN 4570 Score = 67.5 bits (141), Expect(2) = 7e-15 Identities = 49/139 (35%), Positives = 65/139 (46%) Frame = +3 / -3 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + +L P N P V+ LSS Sbjct: 4980 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTKLPPTNTQ*PEVDLLSSGQL 4801 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A * ++G+C T+ TA +SG Sbjct: 4800 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASI*PLLGSCIYRLTILTA*VMSGR 4621 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 4620 V*HKYISLPTNLWYLSLFT 4564 Score = 34.1 bits (68), Expect(2) = 7e-15 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / -3 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 5184 KPFVKQSATCPLDVTNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 5014
>LOC_Os03g25750:12003.t02271:unspliced-genomic expressed protein| Length = 9539 Score = 210 bits (454), Expect(2) = 4e-62 Identities = 89/207 (42%), Positives = 134/207 (64%) Frame = -3 / -3 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 2358 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 2179 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 2178 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 1999 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 1998 AMSVSLSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIK 1819 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD FTK L Sbjct: 1818 EKLDEGVLELEFVMSGGQVADCFTKGL 1738 Score = 49.2 bits (101), Expect(2) = 4e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / -3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 2475 LSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPVN 2353 Score = 66.1 bits (138), Expect(2) = 6e-14 Identities = 49/139 (35%), Positives = 64/139 (46%) Frame = +3 / +2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + RL P N P V+ LSS Sbjct: 1943 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTRLPPTNTQ*PEVDLLSSGQL 2122 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A ++G+C T+ TA +SG Sbjct: 2123 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASICPLLGSCIYRLTILTA*VMSGR 2302 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 2303 V*HKYISLPTSLWYLSLFT 2359 Score = 32.2 bits (64), Expect(2) = 6e-14 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / +2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 1739 KPFVKQSATCPPDITNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 1909
>LOC_Os01g32280:12001.t02806:unspliced-genomic transmembrane protein 19, putative, expressed| Length = 9230 Score = 215 bits (464), Expect(2) = 4e-62 Identities = 94/226 (41%), Positives = 141/226 (62%) Frame = -3 / -2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H +I+RY+K T Sbjct: 3589 DPVDKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGK 3410 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 3409 GLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAE 3230 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++S+L EL + S T CDN A ++ N V H RTKH+EID F Sbjct: 3229 YRAMALSFSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFF 3050 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+AD TK L + + + +I + Sbjct: 3049 IKEKIDSGVLRLEYIKSCEQLADCLTKGLGPSEIQSVCNKMGMIDI 2912 Score = 44.6 bits (91), Expect(2) = 4e-62 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / -2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+ + TP+ +L G P+D Sbjct: 3700 LSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVD 3578 Score = 88.1 bits (186), Expect(2) = 2e-17 Identities = 77/207 (37%), Positives = 91/207 (43%) Frame = +3 / +3 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV SA+ S + I + + S K SIS C V + T L +A LS V Sbjct: 2970 FVRQSASCSHDLIYSNLSTPLSIFSLMKNLSISTCLVRSC*TGLFAMLMADLLSQ*SITV 3149 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L NS + H S A ALY AS +D T ACFL E RL P N P V+ Sbjct: 3150 SLLSTRNSVNKLLIHNISLKLKAIALYSASAVDRATTACFLLRQETRLPPTNTQ*PDVDL 3329 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS AQS + T L P V F YL I K* V G+C T TA Sbjct: 3330 LSSILLAQSASQYPSTFRCPFFLNHNPFPGVPFRYLRIL*TTSK*PVRGSCIYLLTTLTA 3509 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTES 1523 EISGLV + + PT Y +ST S Sbjct: 3510 *EISGLVWQR*IKRPTSLWYASLSTGS 3590 Score = 22.1 bits (42), Expect(2) = 2e-17 Identities = 14/41 (34%), Positives = 18/41 (43%) Frame = +3 / +3 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P +S YF *ER Sbjct: 3579 STGSPD*AHNW*FLSIGVVLARHPSIPVSVNRSKTYFL*ER 3701
>LOC_Os04g40450:12004.t03608:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4416 Score = 210 bits (454), Expect(2) = 4e-62 Identities = 89/207 (42%), Positives = 134/207 (64%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 3730 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 3909 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 3910 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 4089 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 4090 AMSVSLSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIK 4269 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD FTK L Sbjct: 4270 EKLDEGVLELEFVMSGGQVADCFTKGL 4350 Score = 49.2 bits (101), Expect(2) = 4e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 3613 LSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPVN 3735 Score = 66.1 bits (138), Expect(2) = 6e-14 Identities = 49/139 (35%), Positives = 64/139 (46%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + RL P N P V+ LSS Sbjct: 4145 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTRLPPTNTQ*PEVDLLSSGQL 3966 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A ++G+C T+ TA +SG Sbjct: 3965 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASICPLLGSCIYRLTILTA*VMSGR 3786 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 3785 V*HKYISLPTSLWYLSLFT 3729 Score = 32.2 bits (64), Expect(2) = 6e-14 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 4349 KPFVKQSATCPPDITNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 4179
>LOC_Os12g05310:12012.t00419:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 16627 Score = 210 bits (452), Expect(2) = 6e-62 Identities = 88/207 (42%), Positives = 133/207 (64%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 11956 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 12135 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 12136 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 12315 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 12316 AMSVSLSELLWLRNLLSELKLSVDTPMKLWCDNKSAINIANNPVQHDRTKHVELDRFFIK 12495 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD TK L Sbjct: 12496 EKLDEGVLELEFVTSSGQVADCLTKGL 12576 Score = 49.6 bits (102), Expect(2) = 6e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 11839 LSQRKYALDLLSDTGMLGCRPASTPIDQNHKLCAESGNPVN 11961 Score = 67.5 bits (141), Expect(2) = 7e-15 Identities = 49/139 (35%), Positives = 65/139 (46%) Frame = +3 / -3 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + +L P N P V+ LSS Sbjct: 12371 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTKLPPTNTQ*PEVDLLSSGQL 12192 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A * ++G+C T+ TA +SG Sbjct: 12191 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASI*PLLGSCIYRLTILTA*VMSGR 12012 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 12011 V*HKYISLPTNLWYLSLFT 11955 Score = 34.1 bits (68), Expect(2) = 7e-15 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / -3 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 12575 KPFVKQSATCPLDVTNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 12405
>LOC_Os05g33110:12005.t02906:unspliced-genomic endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed| Length = 7860 Score = 210 bits (452), Expect(2) = 6e-62 Identities = 88/207 (42%), Positives = 133/207 (64%) Frame = -3 / -2 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 3635 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 3456 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 3455 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 3276 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 3275 AMSVSLSELLWLRNLLSELKLSVDTPMKLWCDNKSAINIANNPVQHDRTKHVELDRFFIK 3096 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD TK L Sbjct: 3095 EKLDEGVLELEFVTSSGQVADCLTKGL 3015 Score = 49.6 bits (102), Expect(2) = 6e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / -2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 3752 LSQRKYALDLLSDTGMLGCRPASTPIDQNHKLCAESGNPVN 3630 Score = 67.5 bits (141), Expect(2) = 7e-15 Identities = 49/139 (35%), Positives = 65/139 (46%) Frame = +3 / +1 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + +L P N P V+ LSS Sbjct: 3220 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTKLPPTNTQ*PEVDLLSSGQL 3399 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A * ++G+C T+ TA +SG Sbjct: 3400 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASI*PLLGSCIYRLTILTA*VMSGR 3579 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 3580 V*HKYISLPTNLWYLSLFT 3636 Score = 34.1 bits (68), Expect(2) = 7e-15 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / +1 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 3016 KPFVKQSATCPLDVTNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 3186
>LOC_Os07g09760:12007.t00850:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5223 Score = 215 bits (463), Expect(2) = 6e-62 Identities = 93/226 (41%), Positives = 140/226 (61%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H +I+RY+K T Sbjct: 3970 DPVDKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGK 4149 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 4150 GLWFRKNEHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAE 4329 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++S+L EL + S CDN A ++ N V H RTKH+EID F Sbjct: 4330 YRAMALSLSEMLWMRSLLTELRVLRSDIVMLHCDNKSAISIANNPVQHDRTKHVEIDRFF 4509 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+AD TK L + + + +I + Sbjct: 4510 IKEKIDSGVLSLEYIKSCEQLADCLTKGLGPSEIQSICNKMGMIDI 4647 Score = 44.6 bits (91), Expect(2) = 6e-62 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+ + TP+ +L G P+D Sbjct: 3859 LSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVD 3981 Score = 88.1 bits (186), Expect = 2e-16 Identities = 76/207 (36%), Positives = 91/207 (43%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV SA+ S + I + + S K SIS C V + T L +A LS + Sbjct: 4589 FVRQSASCSHDLIYSKLSTPLSIFSLMKNLSISTCLVRSC*TGLFAMLMADLLSQ*SITM 4410 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L NS + H S A ALY AS +D T ACFL E RL P N P V+ Sbjct: 4409 SLLSTRNSVNKLLIHNISLKLKAIALYSASAVDRATTACFLLRQETRLPPTNTQ*PDVDL 4230 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS AQS + T L P V F YL I K* V G+C T TA Sbjct: 4229 LSSILLAQSASQYPSTFRCSFFLNHNPFPGVPFRYLRIL*TTSK*PVRGSCIYLLTTLTA 4050 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTES 1523 EISGLV + + PT Y +ST S Sbjct: 4049 *EISGLVWQR*IKRPTSLWYASLSTGS 3969 Score = 35.0 bits (70), Expect = 1.6 Identities = 35/139 (25%), Positives = 60/139 (43%) Frame = +2 / -1 Query: 893 T*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 T* C IS L *+N + N L ++ I L++ + M + + G IVT + Sbjct: 4599 T*PLC*TIS*LFT*LNILQTKHPAINLLLNEEPINLHMFSAIMLNRVVCNADG*FIVTMK 4420 Query: 1073 TGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPT 1252 ++ + ++Q HP + V C R + L + P N+I + K+ Sbjct: 4419 HHNVTS*HSQFSQQAPHPQHLTQAQSHSSVFCFCGRPSHHCLLFASPRNKITTNKHTIT* 4240 Query: 1253 C*TSVI*ASCPV*IRKSTH 1309 C +S+I + P+ I S H Sbjct: 4239 CRSSIIHTTRPISITISFH 4183
>LOC_Os02g06230:12002.t00521:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4422 Score = 210 bits (452), Expect(2) = 6e-62 Identities = 88/207 (42%), Positives = 133/207 (64%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 3736 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 3915 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 3916 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 4095 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 4096 AMSVSLSELLWLRNLLSELKLSVDTPMKLWCDNKSAINIANNPVQHDRTKHVELDRFFIK 4275 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD TK L Sbjct: 4276 EKLDEGVLELEFVTSSGQVADCLTKGL 4356 Score = 49.6 bits (102), Expect(2) = 6e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 3619 LSQRKYALDLLSDTGMLGCRPASTPIDQNHKLCAESGNPVN 3741 Score = 67.5 bits (141), Expect(2) = 7e-15 Identities = 49/139 (35%), Positives = 65/139 (46%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + +L P N P V+ LSS Sbjct: 4151 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTKLPPTNTQ*PEVDLLSSGQL 3972 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A * ++G+C T+ TA +SG Sbjct: 3971 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASI*PLLGSCIYRLTILTA*VMSGR 3792 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 3791 V*HKYISLPTNLWYLSLFT 3735 Score = 34.1 bits (68), Expect(2) = 7e-15 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 4355 KPFVKQSATCPLDVTNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 4185
>LOC_Os05g33120:12005.t02907:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 2663 Score = 210 bits (452), Expect(2) = 6e-62 Identities = 88/207 (42%), Positives = 133/207 (64%) Frame = -3 / +3 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + GL Sbjct: 1833 VNKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGL 2012 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 F K+ V + ++DWA C DDRRST G+ +F G NL+SW ++KQ VSRS+ EA Y+ Sbjct: 2013 WFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYR 2192 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A++ + +E++W++++L EL + WCDN A ++ N V H RTKH+E+D F+ Sbjct: 2193 AMSVSLSELLWLRNLLSELKLSVDTPMKLWCDNKSAINIANNPVQHDRTKHVELDRFFIK 2372 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKAL 896 E++ +L++ F+ S QVAD TK L Sbjct: 2373 EKLDEGVLELEFVTSSGQVADCLTKGL 2453 Score = 49.6 bits (102), Expect(2) = 6e-62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA DL+ G+ GC+P TP+ KL G P++ Sbjct: 1716 LSQRKYALDLLSDTGMLGCRPASTPIDQNHKLCAESGNPVN 1838 Score = 67.5 bits (141), Expect(2) = 7e-15 Identities = 49/139 (35%), Positives = 65/139 (46%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS +H S A Y AS ++ +T CFL + +L P N P V+ LSS Sbjct: 2248 NSERRFLSHNNSLKLTDIARYSASAVERDTTGCFLLLQDTKLPPTNTQ*PEVDLLSSGQL 2069 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 AQS + TS L RP+ + F YL I A * ++G+C T+ TA +SG Sbjct: 2068 AQSASQ*PSTSKCPFFLNHRPLPGLPFKYLKIL*TASI*PLLGSCIYRLTILTA*VMSGR 1889 Query: 1461 VSVKY*RAPTRHLYLVVST 1517 V KY PT YL + T Sbjct: 1888 V*HKYISLPTNLWYLSLFT 1832 Score = 34.1 bits (68), Expect(2) = 7e-15 Identities = 22/57 (38%), Positives = 29/57 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N SK+ ++ S K +S S CFV + T L +A LSH Sbjct: 2452 KPFVKQSATCPLDVTNSNSKTPSSSFSLIKKRSNSTCFVRSC*TGLLAMLIADLLSH 2282
>LOC_Os12g02780:12012.t00171:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1623 Score = 205 bits (443), Expect(2) = 2e-61 Identities = 86/189 (45%), Positives = 122/189 (64%) Frame = -3 / +1 Query: 1426 C*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGG 1247 C F+H P KRI+RY+K +L+ GL+ P ++A+S++DWAGC D RRST G Sbjct: 1015 CLFMHDPREPQLALVKRILRYIKGSLSAGLHIGTGPVGSLTAYSDADWAGCPDSRRSTSG 1194 Query: 1246 FAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFW 1067 + IF G NL+SWS+++Q T+SRSS +A Y+ +A+A E W++ +++EL S T + Sbjct: 1195 YCIFLGDNLVSWSSKRQTTISRSSAKAEYRVVAHAVVECCWLR*LIQELHAPISTTTIVF 1374 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 C+NV A Y++AN V H RTKHIEID HFV E+VA + + + S Q AD TK L Q Sbjct: 1375 CNNVSAIYMTANPVRHRRTKHIEIDIHFVREKVALGQVRVLHVPSTHQFADIMTKGLPVQ 1554 Query: 886 SFEDFKHNL 860 F DF+ +L Sbjct: 1555 LFTDFRSSL 1581 Score = 52.4 bits (108), Expect(2) = 2e-61 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ + KLS EG P+ Sbjct: 795 DGLFLSQLQYAVDLLQRAGMSECHPTATPVDTRAKLSASEGAPV 926 Score = 84.9 bits (179), Expect(2) = 4e-18 Identities = 57/156 (36%), Positives = 74/156 (47%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK SISMC V +T LA +A TL + V+E+ NS+ + S A Sbjct: 1475 ATFSRTKWMSISMCLVRRWRTGLAVM*IALTLLQKTMVVVEMGACNSWIS*RSQQHSTTA 1296 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 A+ Y A L+ E V C L D + RL P+ + P VER S PAQS E A+ G Sbjct: 1295 *ATTRYSALALEREIVVCRLEDQDTRLSPRKMQ*PEVERRESGQPAQSASE*AVRDPTGP 1116 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTL 1433 + +RP S +RL * G+C H L Sbjct: 1115 VPMWRPAESEPLM*RRMRLTKAS*GSRGSCIKRHLL 1008 Score = 27.6 bits (54), Expect(2) = 4e-18 Identities = 15/26 (57%), Positives = 16/26 (61%) Frame = +3 / -3 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVS 1514 TA I G V V+Y RAP R LY V S Sbjct: 1006 TA*AILGRVRVRYWRAPARLLYSVGS 929 Score = 48.7 bits (100), Expect = 1e-04 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -3 / +3 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKV 1427 PT + L D T+Y+ L GALQYLTLTRP I++AV +V Sbjct: 867 PTATPVDTRAKLSASEGAPVADPTEYKSLAGALQYLTLTRPKIAYAVQQV 1016
>LOC_Os03g26290:12003.t02317:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4078 Score = 220 bits (474), Expect(2) = 2e-61 Identities = 90/214 (42%), Positives = 139/214 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3398 DKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3577 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST G+A G + SWS +KQ V+ SS EA Sbjct: 3578 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMCSWSTKKQNIVALSSAEAE 3757 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A +S N V H RTKHI I +H+ Sbjct: 3758 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHY 3937 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 + E V + + + F + +Q+AD FTKAL + F Sbjct: 3938 IREAVDRQEVKLEFCRTNEQLADIFTKALSKEKF 4039 Score = 37.7 bits (76), Expect(2) = 2e-61 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + CK TPL EK +G Sbjct: 3278 IFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDG 3394 Score = 51.9 bits (107), Expect(3) = 9e-08 Identities = 28/66 (42%), Positives = 32/66 (48%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D E P A P V +SS Sbjct: 3828 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQEHIPEPSEKA*PDVLFISS 3649 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3648 RHPAQS 3631 Score = 28.1 bits (55), Expect(3) = 9e-08 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V ST S Sbjct: 3480 ANIISGRVAVKYNKLPTKLL*IVGSTLS 3397 Score = 24.9 bits (48), Expect(3) = 9e-08 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ PS+ FS +KGV LQ FF AYF Sbjct: 3405 TLSAPSLAFCFSFGNKGVVTDLQLSILNFFRIFSAYF 3295
>LOC_Os04g51870:12004.t04663:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1032 Score = 213 bits (459), Expect(2) = 2e-61 Identities = 93/226 (41%), Positives = 140/226 (61%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H +I+RY+K T Sbjct: 340 DPVDKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGK 519 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 520 GLWFMKNGHLNVEGYCDADWASSMDDRRSTSGYYVFVGGNLVSWRSKKQAVVARSTAEAE 699 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++S+ EL + S T CDN A ++ N V H RTKH+EID F Sbjct: 700 YRAMALSLSEMLWMRSLFTELRVLRSDTVMLHCDNRSAISIANNPVQHDRTKHVEIDRFF 879 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+AD TK L + + + +I + Sbjct: 880 IKEKINSGVLRLEYIKSCEQLADYLTKGLGPSEIQSICNKMGMIDI 1017 Score = 44.6 bits (91), Expect(2) = 2e-61 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+ + TP+ +L G P+D Sbjct: 229 LSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVD 351 Score = 83.5 bits (176), Expect(2) = 4e-16 Identities = 76/207 (36%), Positives = 90/207 (43%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV SA+ S + I + S K SIS C V + T L +A LS V Sbjct: 959 FVR*SASCSHDLIYSNLSTPLLIFSLMKNLSISTCLVRSC*TGLFAMLMADLLSQ*SITV 780 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L NS + H S A ALY AS +D T ACFL E RL P N P V+ Sbjct: 779 SLLSTRNSVNKLLIHNISLKLKAIALYSASAVDRATTACFLLRQETRLPPTNT**PDVDL 600 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS AQS + T + P V F YL I K* V G+C T TA Sbjct: 599 LSSILLAQSASQYPSTFRCPFFINHNPFPGVPFRYLRIL*TTSK*PVRGSCIYLLTTLTA 420 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTES 1523 EISGLV + + PT Y +ST S Sbjct: 419 *EISGLVWQR*IKRPTSLWYASLSTGS 339 Score = 22.1 bits (42), Expect(2) = 4e-16 Identities = 14/41 (34%), Positives = 18/41 (43%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 S G P ++ L GV + P P +S YF *ER Sbjct: 350 STGSPD*AHNW*FLSIGVVLARHPSIPVSVNRSKTYFL*ER 228
>LOC_Os05g22770:12005.t01936:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4830 Score = 215 bits (463), Expect(2) = 3e-61 Identities = 90/165 (54%), Positives = 114/165 (69%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDIS+AV +VC +H P H A KRI+RYV+ TL+ GL+ Sbjct: 4330 DPTDYRSLAGALQYLTFTRPDISYAVQQVCLHMHDPRDSHLAALKRILRYVRGTLDFGLH 4509 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +S ST + A S+ DWAGC D R+ST G+A+F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4510 IRRSTSTDLVACSDGDWAGCPDTRKSTSGYAVFLGNNLVSWSSKRQNTVSRSSAEAEYRA 4689 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFH 1019 +ANA AE W++ + EL S+ +CDNV A YLS N V H Sbjct: 4690 VANAVAETCWLRQLSHELHTPPSQATLVYCDNVSAVYLSTNPVQH 4824 Score = 42.3 bits (86), Expect(2) = 3e-61 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGT 1529 + + L LSQ +Y+ + +++ G+ CKP TP+ + KLS +G+ Sbjct: 4189 DSSGLLLSQRQYSIETLERAGMSDCKPCSTPVDTNAKLSSSDGS 4320 Score = 100 bits (214), Expect = 2e-20 Identities = 58/124 (46%), Positives = 72/124 (58%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + SA A A+ALY AS LD +TV L D E +L P+N A P V+ S HPAQS E+ Sbjct: 4721 SQQVSATALATALYSASALDRDTVF*RLEDQETKLLPRNTA*PEVDLRVSGHPAQSPSEQ 4542 Query: 1302 ALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*R 1481 A SVE + P SV TY +IRL A + +G+C T TA EISGLV V+Y R Sbjct: 4541 ATRSVEVERRM*SPKSSVPRTYRSIRLRAARCESLGSCMWRQTC*TA*EISGLVKVRYWR 4362 Query: 1482 APTR 1493 AP + Sbjct: 4361 APAK 4350 Score = 27.6 bits (54), Expect(2) = 1.2 Identities = 13/41 (31%), Positives = 19/41 (46%) Frame = -2 / +3 Query: 1484 CSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKIC 1362 CS V D + *YLLCC + + + QA + +C Sbjct: 4359 CSPVSDLH*A*YLLCCSASLSPHARSQGFTSSRSQADTPVC 4481 Score = 24.9 bits (48), Expect(2) = 1.2 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 / +3 Query: 1295 *FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKC 1143 *+RLG M + +C I * +V + HC I R VQG +C Sbjct: 4548 *WRLGGMS*HSQVHFGLCCISG**LGLLVLQASEHCVSIQRRSGVQGGGQC 4700
>LOC_Os10g34290:12010.t02727:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3541 Score = 214 bits (462), Expect(2) = 3e-61 Identities = 87/209 (41%), Positives = 138/209 (66%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H RI+RY+K + Sbjct: 2849 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGK 3028 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ F K+ + + ++DW CLDDRRST G+ +F G NL+SW ++K++ VSRS+ EA Sbjct: 3029 GIWFKKNGHLDMEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKESVVSRSTAEAE 3208 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y++++ + +E++W++++L EL + +S + WCDN A ++ N V H RTKH+EID F Sbjct: 3209 YRSMSMSLSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFF 3388 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + ER+ L++ F++S +QV D TKAL Sbjct: 3389 IKERMDEGTLNLGFVNSGEQVVDSLTKAL 3475 Score = 42.8 bits (87), Expect(2) = 3e-61 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P T + KL G P++ Sbjct: 2738 LSQRKYVLDLLSDTGMLGCRPASTLIEQNHKLCAESGDPVN 2860 Score = 63.4 bits (132), Expect(2) = 1e-12 Identities = 48/141 (34%), Positives = 61/141 (43%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S LY AS ++ +T FL + +L P N P V+ LSSR Sbjct: 3270 NSAKRFFNHNNSLKLIDIDLYSASAVERDTTDSFLLLQDTKLPPINTQ*PDVDLLSSRQL 3091 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 QS + S L P+ + F YL I * ++G+C T TA ISGL Sbjct: 3090 PQSASQYPSISRCPFFLNHMPLPGLAFKYLKILYTTSM*PLLGSCMYRLTTLTA*VISGL 2911 Query: 1461 VSVKY*RAPTRHLYLVVSTES 1523 V KY PT YL + T S Sbjct: 2910 V*HKYINLPTSL*YLSLLTGS 2848 Score = 30.9 bits (61), Expect(2) = 1e-12 Identities = 23/56 (41%), Positives = 28/56 (50%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 AFV S T S E K + LS K +SIS CFV + T L ++A LSH Sbjct: 3471 AFVKLSTTCSPEFTKPKFKVPSSILSLIKKRSISTCFVRSCWTGLLAIFMADLLSH 3304
>LOC_Os03g63450:12003.t05562:unspliced-genomic snRK1-interacting protein 1, putative, expressed| Length = 8332 Score = 210 bits (454), Expect(2) = 7e-61 Identities = 90/209 (43%), Positives = 136/209 (65%) Frame = -3 / -2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + Sbjct: 2847 DPVNRERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGK 2668 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ + + ++DWA CLDDRRST G+ ++ G NL+SW ++KQ+ VSRS+ EA Sbjct: 2667 GLWFKKNGHLKIEGYCDADWASCLDDRRSTSGYCVYVGGNLVSWRSKKQSVVSRSTAEAE 2488 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++++L EL I + CDN A ++ N V H RTKH+EID F Sbjct: 2487 YRAMAASLSELLWLRNLLVELKILGNTPMKLLCDNKSAINIANNPVQHDRTKHVEIDRFF 2308 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + E++ +L++ F+ S QVAD TK L Sbjct: 2307 IKEKLDEGVLELGFVTSGGQVADCLTKGL 2221 Score = 45.1 bits (92), Expect(2) = 7e-61 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / -2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 +SQ KY DL+ + G+ GC P TP+ KL G P++ Sbjct: 2958 ISQRKYVLDLLSETGMLGCCPVSTPIDQNHKLCAESGDPVN 2836 Score = 41.8 bits (85), Expect(3) = 6e-11 Identities = 23/55 (41%), Positives = 29/55 (52%) Frame = +3 / +2 Query: 1125 HMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQS 1289 H S A ALY AS ++ +T CFL + +L P P V+ LSSR AQS Sbjct: 2450 HNNSLKLAAIALYSASAVERDTTDCFLLLQDTKLPPT*TQ*PEVDLLSSRQLAQS 2614 Score = 35.4 bits (71), Expect(3) = 6e-11 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 / +2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 K FV SAT + N S + + S K +SIS CFVL+ T L +A LSH Sbjct: 2222 KPFVKQSATCPPDVTNPNSNTPSSNFSLIKKRSISTCFVLSCWTGLLAMLIADLLSH 2392 Score = 27.6 bits (54), Expect(3) = 6e-11 Identities = 17/55 (30%), Positives = 26/55 (47%) Frame = +2 / +1 Query: 1364 ISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVFSSVH*IYR 1528 IS ++ + W M TH S +RSC I +S++Q+ V +H I R Sbjct: 2689 ISQDSIHRLHMTTSWIMHISTHHTDSICYVRSCMT*IYQSSHQSLVSFPIHWISR 2853
>LOC_Os06g02750:12006.t00168:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4298 Score = 204 bits (439), Expect(2) = 9e-61 Identities = 83/182 (45%), Positives = 123/182 (67%) Frame = -3 / +3 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLI 1217 ++T KRI+RYV+ T + GL +S + ++A+S++DWAGC D RST GF +FFG +L+ Sbjct: 3603 NWTLVKRILRYVRGTTHKGLQLRRSSTPSLTAYSDADWAGCPDTGRSTSGFCVFFGDSLV 3782 Query: 1216 SWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLS 1037 SWS+++Q+ VSRSS E Y+ +ANAT E W++ +L EL IK K +CDN+ A YLS Sbjct: 3783 SWSSKRQSVVSRSSAEVEYRGVANATTECCWLRHLLDELHIKLDKATLVYCDNISAVYLS 3962 Query: 1036 ANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLN 857 N V H KH+E+D HFV E+VA + + I ++ Q+A+ TK L T FEDF+++L Sbjct: 3963 KNPVHHGHAKHVELDVHFVREKVAVGDIRVVHIPTRQQLANIMTKGLPTALFEDFRYSLC 4142 Query: 856 LI 851 ++ Sbjct: 4143 IV 4148 Score = 57.9 bits (120), Expect(2) = 9e-61 Identities = 27/62 (43%), Positives = 35/62 (56%) Frame = -3 / +1 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 P P K + T D T YR +VGALQ LTL RPD+S+AV +VC +H+ V Sbjct: 1942 PAPTPVDTKAKVSSTTGQPYSDPTFYRSIVGALQDLTLRRPDLSYAVQQVCLHMHSLRDV 2121 Query: 1396 HF 1391 H+ Sbjct: 2122 HW 2127 Score = 81.7 bits (172), Expect = 1e-14 Identities = 36/90 (40%), Positives = 52/90 (57%) Frame = -3 / +3 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 VD YR ++ +L YLT +RPDI F++ F P H A KRI+RY+K++ IGL Sbjct: 1374 VDLKLYRSVIDSLLYLTASRPDIMFSICMCARFQATPKECHLMAVKRILRYLKNSSTIGL 1553 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGG 1247 + K + +S+SD+ GC D +ST G Sbjct: 1554 WYPKGSKFKLVGYSDSDYVGCKVDNKSTFG 1643 Score = 73.9 bits (155), Expect = 3e-12 Identities = 50/143 (34%), Positives = 65/143 (45%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK S S C * T D+ A LS L + +S + S VA Sbjct: 4033 ATFSRTKCTSSSTCLA*P**TGFLDR*TAEILSQYTSVALSSLM*SSSRR*RSQQHSVVA 3854 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGD 1325 FA+ Y S L+ +T C L DH+ + PK P VER S PAQS E A++ + Sbjct: 3853 FATPRYSTSALERDTTDCRLEDHDTKESPKKTQKPDVERPVSGQPAQSASEYAVSDGVEE 3674 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK 1394 RP+ V T IRL +V+ Sbjct: 3673 RRSCRPLCVVPRT*RRIRLTSVQ 3605
>LOC_Os11g17460:12011.t01524:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1064 Score = 128 bits (275), Expect(4) = 9e-61 Identities = 52/103 (50%), Positives = 74/103 (71%) Frame = -3 / +3 Query: 1456 PDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAG 1277 PDIS+AV +VC +H P H A KRI+RYV TL+ GL+ +S + + A+S++DWAG Sbjct: 495 PDISYAVQQVCLHMHDPREPHLAALKRILRYVHGTLDHGLHIQRSRAVDLVAYSDADWAG 674 Query: 1276 CLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALA 1148 C + RRST G+ +F G NL+SWS++ Q T+SRSS +A Y+A+A Sbjct: 675 CPNMRRSTSGYVVFLGDNLVSWSSKHQNTLSRSSAKAKYRAVA 803 Score = 87.2 bits (184), Expect(4) = 9e-61 Identities = 40/93 (43%), Positives = 52/93 (55%) Frame = -3 / +3 Query: 1159 KALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV 980 KA A AE W++ +L EL SK +CDNV A YL N H RTKH+EID HFV Sbjct: 780 KAKYRAVAETCWLRQLLNELHSPPSKATVVYCDNVNAVYLFTNPEQHQRTKHVEIDLHFV 959 Query: 979 *ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 +RV ++ + + + Q AD FTK L + F Sbjct: 960 RDRVDAGVVRVLHVPTTSQYADIFTKGLPSSVF 1058 Score = 46.0 bits (94), Expect(4) = 9e-61 Identities = 15/43 (34%), Positives = 28/43 (65%) Frame = -3 / +1 Query: 1651 ALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 +++LSQ +Y D++ + G+ CKP TP+ + KLS ++G + Sbjct: 307 SMYLSQRQYILDILDRAGMSDCKPCSTPVDTNAKLSAVDGDSV 435 Score = 30.4 bits (60), Expect(4) = 9e-61 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLT 1460 D T +R L GALQYLT T Sbjct: 439 DPTDFRSLAGALQYLTFT 492 Score = 57.0 bits (118), Expect(2) = 9e-10 Identities = 39/103 (37%), Positives = 50/103 (48%) Frame = +3 / -2 Query: 1149 ASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDL 1328 A+ALY A L+ + V L D + RL P+N P V+ L PAQS E A S D Sbjct: 802 ATALYFALALERDKVF*CLEDQDTRLSPRNTT*PEVDLLMLGQPAQSASE*ATKSTARDR 623 Query: 1329 LKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISG 1457 P V TY +RL A + G+C T +TA E+SG Sbjct: 622 *MCSP*SRVP*TYRRMRLRAARCGSRGSCMWRQTCWTAYEMSG 494 Score = 27.2 bits (53), Expect(2) = 9e-10 Identities = 24/65 (36%), Positives = 29/65 (44%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 +T S TK +SIS C V + L + A TLS LE NSF + SA A Sbjct: 973 STRSRTKCRSISTCLVRWCCSGLVKR*TALTLSQ*TTVALEGGECNSFRSWRSQQVSATA 794 Query: 1146 FASAL 1160 AL Sbjct: 793 LYFAL 779
>LOC_Os12g05520:12012.t00440:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4081 Score = 217 bits (469), Expect(2) = 1e-60 Identities = 89/214 (41%), Positives = 138/214 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3401 DKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3580 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD + T G+A G + SWS +KQ V+ SS EA Sbjct: 3581 GIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSAEAE 3760 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A +S N V H RTKHI I +H+ Sbjct: 3761 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHY 3940 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 + E V + + + F + +Q+AD FTKAL + F Sbjct: 3941 IREAVDRQEVKLEFCRTDEQLADIFTKALSKEKF 4042 Score = 37.7 bits (76), Expect(2) = 1e-60 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + CK TPL EK +G Sbjct: 3281 IFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDG 3397 Score = 52.8 bits (109), Expect(3) = 5e-08 Identities = 28/66 (42%), Positives = 32/66 (48%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D E P A P V +SS Sbjct: 3831 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQEHIPEPSEKA*PDVPFISS 3652 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3651 RHPAQS 3634 Score = 28.1 bits (55), Expect(3) = 5e-08 Identities = 15/28 (53%), Positives = 19/28 (67%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V ST S Sbjct: 3483 ANIISGRVAVKYNKLPTKLL*IVGSTLS 3400 Score = 24.9 bits (48), Expect(3) = 5e-08 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ PS+ FS +KGV LQ FF AYF Sbjct: 3408 TLSAPSLAFCFSFGNKGVVTDLQLSILNFFRIFSAYF 3298
>LOC_Os03g61660:12003.t05396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4059 Score = 217 bits (469), Expect(2) = 1e-60 Identities = 89/214 (41%), Positives = 138/214 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D D T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3379 DKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3558 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST G+A G + SWS +KQ V+ SS EA Sbjct: 3559 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMCSWSTKKQNIVALSSAEAE 3738 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A +S N V H RTKHI I +H+ Sbjct: 3739 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHY 3918 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 + E V + + + F + +Q+AD FTKAL + F Sbjct: 3919 IREAVDRQEVKLEFCRTDEQLADIFTKALSKEKF 4020 Score = 37.7 bits (76), Expect(2) = 1e-60 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + CK TPL EK +G Sbjct: 3259 IFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDG 3375 Score = 51.9 bits (107), Expect(3) = 4e-07 Identities = 28/66 (42%), Positives = 32/66 (48%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D E P A P V +SS Sbjct: 3809 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQEHIPEPSEKA*PDVLFISS 3630 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3629 RHPAQS 3612 Score = 25.8 bits (50), Expect(3) = 4e-07 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V S S Sbjct: 3461 ANIISGRVAVKYNKLPTKLL*IVGSALS 3378 Score = 24.9 bits (48), Expect(3) = 4e-07 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ PS+ FS +KGV LQ FF AYF Sbjct: 3386 ALSAPSLAFCFSFGNKGVVTDLQLSILNFFRIFSAYF 3276
>LOC_Os04g38200:12004.t03391:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2446 Score = 234 bits (506), Expect = 1e-60 Identities = 95/140 (67%), Positives = 114/140 (81%) Frame = -3 / +2 Query: 1264 RRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSS 1085 RRSTGGFA+F G NL+SWSARKQA VSRSS EA YKALA+ATAE++W+ ++L E+ I + Sbjct: 2021 RRSTGGFAVFLGSNLVSWSARKQAAVSRSSTEAEYKALADATAEIMWLHTLLCEIAINAP 2200 Query: 1084 KTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFT 905 K WCDN+GA YLSAN VFHARTKHIE+D+HFV ERV+ +LL+I +I SKDQVADGFT Sbjct: 2201 KAAKMWCDNIGAKYLSANPVFHARTKHIEVDYHFVRERVSRRLLEIEYISSKDQVADGFT 2380 Query: 904 KALRTQSFEDFKHNLNLIKL 845 KAL + FEDFK NLN+ L Sbjct: 2381 KALAVRPFEDFKSNLNITSL 2440 Score = 148 bits (318), Expect = 1e-34 Identities = 74/123 (60%), Positives = 83/123 (67%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 KA V PSAT*S E I +S +L T S TK* S S+C V A*KT LADKY+AP LSH Sbjct: 2388 KALVKPSAT*SLEEIYSISSNLLDTRSRTK**STSICLVRA*KTGLADKYLAPMLSHHIF 2209 Query: 1077 GVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPV 1256 L FI S C H+ SAVA ASALY AS+LDL+T ACFLA H+ RL P+ ANPPV Sbjct: 2208 AALGAFIAISHRRVCNHIISAVASASALYSASVLDLDTAACFLALHDTRLEPRKTANPPV 2029 Query: 1257 ERL 1265 ERL Sbjct: 2028 ERL 2020 Score = 74.8 bits (157), Expect(2) = 2e-13 Identities = 41/99 (41%), Positives = 56/99 (56%) Frame = +2 / -1 Query: 971 SLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRAFYTQLL*HGLHPYDFSCGIC 1150 + S+KM I + +SMK+ I + S +VTP SLR+ Y L * + P++ C I Sbjct: 2314 TFSNKMIINFYMFSTSMKNRIS**ILSSYVVTPHFRSLRSIYCNLT*ESM*PHNLCCCIS 2135 Query: 1151 *CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSV 1267 *CLV C G GL SS P*+++R+ K K T *TSV Sbjct: 2134 *CLVFCFST*PGYCGLLSSTP*HKVRA*KNSKSTS*TSV 2018 Score = 22.1 bits (42), Expect(2) = 2e-13 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +2 / -1 Query: 857 VEIMFEVFKTLCT*SFCKPISNLIF*MN 940 VEI EVFK + SF + I LI N Sbjct: 2428 VEIALEVFKRSHSQSFSETICYLILGRN 2345 Score = 48.7 bits (100), Expect(2) = 5e-05 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = -1 / +3 Query: 1266 TDVQQVGLQYFLDLISFHGLLENKPLFPDLASRQGTRH*QMPQLKSYG 1123 TDVQ V L +F L HG+LE+KP +P +Q TRH* M Q + G Sbjct: 2019 TDVQLVDLLFF*ALTLCHGVLESKPQYPGQVLKQNTRH*LMQQQRLCG 2162 Score = 24.4 bits (47), Expect(2) = 5e-05 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -1 / +3 Query: 942 LFIQKIKLLMGLQKLYVHKVLKTSNIIST 856 +F+ +IK M KL++ LKTS IST Sbjct: 2343 IFLPRIK*QMVSLKLWLCDRLKTSRAIST 2429 Score = 46.0 bits (94), Expect = 8e-04 Identities = 33/97 (34%), Positives = 43/97 (44%) Frame = +1 / -3 Query: 976 LTQNENLSQCALF*HERLDWQTSMWLQHCHTRNRES*SFLYPTPLAWIAPI*LQLWHLLV 1155 L QN+N + HE+ D + L CHT + * L + + * L H LV Sbjct: 2309 LEQNDNQLLYV*YEHEKQD*LINT*LLCCHTTFSQP*EHLLQSHIGEYVTT*SLLLHQLV 2130 Query: 1156 PCTLPRC*IWKQWLVF*QTMK*D*VQKILQTHLLNVC 1266 PC L + W L F* +M * + Q H LNVC Sbjct: 2129 PCILLQYLTWILRLAF*HSMTQG*SLEKQQIHQLNVC 2019 Score = 44.1 bits (90), Expect = 0.003 Identities = 20/43 (46%), Positives = 25/43 (58%) Frame = -2 / +1 Query: 1265 QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRVQGTSKCHS 1137 QTFN W+C * M C*K S Q+ + R+QGTS C+S Sbjct: 2020 QTFNWWICCFSRL*PCVMEC*KASRSIQVKY*SRIQGTS*CNS 2148
>LOC_Os11g47010:12011.t04176:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1041 Score = 210 bits (453), Expect(2) = 1e-60 Identities = 91/209 (43%), Positives = 136/209 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + Sbjct: 349 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGK 528 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA LDDRRST G+ +F G NL+SW ++KQ VSRS+ EA Sbjct: 529 GLWFKKNGHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 708 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A++ + +E++W++++L EL + + WCDN A ++ N V H RTKH+EID F Sbjct: 709 YRAMSVSLSELLWLRNLLSELKLLMNIPMKLWCDNKSAISIANNPVQHDRTKHVEIDRFF 888 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + E++ +L + F+ S +QVAD TKAL Sbjct: 889 IKEKLDEGILKLGFVMSGEQVADCLTKAL 975 Score = 44.6 bits (91), Expect(2) = 1e-60 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 238 LSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVN 360 Score = 45.5 bits (93), Expect(3) = 1e-13 Identities = 26/63 (41%), Positives = 32/63 (50%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H +S ALY AS ++ +T CFL E +L P N P V+ LSSR Sbjct: 770 NSERRFLNHNSSLKLTDIALYSASAVERDTTGCFLLLQETKLPPTNTQ*PEVDLLSSRLL 591 Query: 1281 AQS 1289 AQS Sbjct: 590 AQS 582 Score = 35.9 bits (72), Expect(3) = 1e-13 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = +3 / -2 Query: 1329 LKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLV 1508 L +P + F YL I A * + G+C T TA +SGLV KY PT YL Sbjct: 542 LNHKPFPGLPFKYLRILYTASM*PLRGSCMYRLTTLTA*VMSGLV*HKYINRPTSL*YLS 363 Query: 1509 VSTES 1523 + T S Sbjct: 362 LFTGS 348 Score = 33.1 bits (66), Expect(3) = 1e-13 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 KAFV SAT S + K ++ S K +SIS CFV + T L +A LSH Sbjct: 974 KAFVKQSATCSPDITKPSFKIPSSSFSLIKKRSISTCFVRSC*TGLLAMLIADLLSH 804
>LOC_Os09g19810:12009.t01715:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 2727 Score = 210 bits (452), Expect(2) = 2e-60 Identities = 91/209 (43%), Positives = 135/209 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV V ++H P + H A RI+RY+K + Sbjct: 2035 DPVNKERYQRLVGRLIYLCHTRPDITYAVTVVSRYMHDPRSGHMDAVYRILRYLKGSPGK 2214 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA LDDRRST G+ +F G NL+SW ++KQ VSRS+ EA Sbjct: 2215 GLWFKKNGHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 2394 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A++ + +E++W++++L EL + + WCDN A ++ N V H RTKH+EID F Sbjct: 2395 YRAMSVSLSELLWLRNLLSELKLLMNIPMKLWCDNKSAISIANNPVQHDRTKHVEIDRFF 2574 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + E++ +L + F+ S +QVAD TKAL Sbjct: 2575 IKEKLDEGILKLGFVMSGEQVADCLTKAL 2661 Score = 44.6 bits (91), Expect(2) = 2e-60 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 1924 LSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVN 2046 Score = 45.5 bits (93), Expect(3) = 2e-13 Identities = 26/63 (41%), Positives = 32/63 (50%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H +S ALY AS ++ +T CFL E +L P N P V+ LSSR Sbjct: 2456 NSERRFLNHNSSLKLTDIALYSASAVERDTTGCFLLLQETKLPPTNTQ*PEVDLLSSRLL 2277 Query: 1281 AQS 1289 AQS Sbjct: 2276 AQS 2268 Score = 35.0 bits (70), Expect(3) = 2e-13 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = +3 / -2 Query: 1329 LKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLV 1508 L +P + F YL I A * + G+C T TA +SGLV KY PT YL Sbjct: 2228 LNHKPFPGLPFKYLRILYTASM*PLRGSCMYRLTTVTA*VMSGLV*HKYISRPTSL*YLS 2049 Query: 1509 VSTES 1523 + T S Sbjct: 2048 LFTGS 2034 Score = 33.1 bits (66), Expect(3) = 2e-13 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 KAFV SAT S + K ++ S K +SIS CFV + T L +A LSH Sbjct: 2660 KAFVKQSATCSPDITKPSFKIPSSSFSLIKKRSISTCFVRSC*TGLLAMLIADLLSH 2490
>LOC_Os11g29950:12011.t02599:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1971 Score = 212 bits (457), Expect(2) = 2e-60 Identities = 92/226 (40%), Positives = 140/226 (61%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ Y+ LVG L YL TRPDIS+ V+ V ++H P T H +I+RY+K T Sbjct: 1279 DPVNKEAYQRLVGRLIYLCHTRPDISYVVSVVSRYMHDPRTGHLDVVHKILRYLKGTPGK 1458 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 1459 GLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAE 1638 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A + +E++W++S+L EL + S T CDN A ++ N V H RTKH+EID F Sbjct: 1639 YRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRTKHVEIDRFF 1818 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+AD TK L + + + +I + Sbjct: 1819 IKEKIDSGVLRLEYIKSCEQLADCLTKGLGPSEIQSICNKMGMIDI 1956 Score = 42.3 bits (86), Expect(2) = 2e-60 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+ + TP+ +L G P++ Sbjct: 1168 LSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPVN 1290 Score = 83.5 bits (176), Expect = 4e-15 Identities = 75/207 (36%), Positives = 89/207 (42%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGV 1082 FV SA+ S + I + + S K SIS C V + T L +A LS V Sbjct: 1898 FVRQSASCSHDLIYSNLSTPLSIFSLMKNLSISTCLVRSC*TGLFAMLMADLLSQ*SITV 1719 Query: 1083 LELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVER 1262 L NS + H S A ALY AS +D T ACFL E RL P N P V+ Sbjct: 1718 SLLSTRNSVNKLLIHNISLKLKAIALYSASAVDRATTACFLLRQETRLPPTNTQ*PDVDL 1539 Query: 1263 LSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTA 1442 LSS AQS + T L P V F YL I K* V G+C T T Sbjct: 1538 LSSILLAQSASQYPSTFRCPFFLNHNPFPGVPFRYLRIL*TTSK*PVRGSCIYLLTTLTT 1359 Query: 1443 KEISGLVSVKY*RAPTRHLYLVVSTES 1523 EISGLV + + PT Y + T S Sbjct: 1358 *EISGLVWQR*IKRPTSLWYASLLTGS 1278 Score = 35.4 bits (71), Expect = 1.2 Identities = 36/139 (25%), Positives = 60/139 (43%) Frame = +2 / -1 Query: 893 T*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 T* C IS L *+N + N L ++ I L++ + M + + G IVT + Sbjct: 1908 T*PLC*TIS*LFT*LNILQPKHPAINLLLNEEPINLHMFSAIMLNRVVCNADG*FIVTMK 1729 Query: 1073 TGSLRAFYTQLL*HGLHPYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPT 1252 S+ + ++Q HP + V C R + L + P N+I + K+ Sbjct: 1728 HHSVTS*HSQFRQQAPHPQHLTQAQSHSSVFCFCGRPSHHCLLFASPRNKITTNKHTIT* 1549 Query: 1253 C*TSVI*ASCPV*IRKSTH 1309 C +S+I + P+ I S H Sbjct: 1548 CRSSIIHTTRPISITISFH 1492
>LOC_Os08g42160:12008.t03945:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3984 Score = 233 bits (504), Expect = 2e-60 Identities = 97/148 (65%), Positives = 117/148 (79%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 +N + L+Q+KYA DL+KK G+ CKP TPLS +EKLSL EG+ + D + YR +VGAL Sbjct: 3538 QNGIVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGAL 3717 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 QYLTLTRPDI+F+VNKVC FLHAPTTVH+ A KRI+RY+K +GL KS STLVS F Sbjct: 3718 QYLTLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGF 3897 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLIS 1214 S++DWAGCLDDRRSTGGFAIF G NL+S Sbjct: 3898 SDADWAGCLDDRRSTGGFAIFLGSNLVS 3981 Score = 111 bits (237), Expect(2) = 3e-31 Identities = 53/92 (57%), Positives = 61/92 (66%) Frame = +3 / -2 Query: 1215 EMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK 1394 E R P+NIANPPV+ LSS+ PAQS EK LT V+ DL P CF YL I A++ Sbjct: 3980 ETRFEPRNIANPPVDLLSSKQPAQSASEKPLTKVDPDL*ISSPNRVHCFKYLRILFTAIQ 3801 Query: 1395 *TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 TVVGACKN TL T K +SGLV VKY +APT Sbjct: 3800 CTVVGACKNWQTLLTEKAMSGLVRVKYCKAPT 3705 Score = 45.5 bits (93), Expect(2) = 3e-31 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS* 1637 PS R+SFS+ ++GV GLQ P FF KS+AY S* Sbjct: 3662 PS*RESFSLTERGVLAGLQSIMPTFFNKSLAYLS* 3558 Score = 43.7 bits (89), Expect = 0.004 Identities = 17/31 (54%), Positives = 27/31 (87%) Frame = +2 / -1 Query: 1217 NEIRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 ++I ++KYCK +C*+SVI* +CPV IR++T+ Sbjct: 3978 DQI*TQKYCKSSC*SSVI*TACPVCIREATN 3886
>LOC_Os12g34040:12012.t03093:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 1105 Score = 233 bits (503), Expect = 3e-60 Identities = 93/141 (65%), Positives = 117/141 (82%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYATDL+K+ G+ GCK TPLS+T+KL EG P+ + D+T+YR +VGALQYLTL Sbjct: 682 LTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGALQYLTL 861 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F VNKVC +LHAPT++H+TA KRI+RY+K +L +GL KS STLVSAFS++DW Sbjct: 862 TRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADW 1041 Query: 1282 AGCLDDRRSTGGFAIFFGPNL 1220 AGC DDR+STGGFA+F G NL Sbjct: 1042 AGCPDDRKSTGGFAVFLGANL 1104 Score = 157 bits (337), Expect = 2e-37 Identities = 78/139 (56%), Positives = 89/139 (64%) Frame = +3 / -3 Query: 1221 RLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*T 1400 RL PKN ANPPV+ SS HPAQS E ALT VE DL RP YL +RL AV+ Sbjct: 1103 RLAPKNTANPPVDLRSSGHPAQSASENALTRVESDLQIRRPSPKDPLRYLNMRLTAVQCN 924 Query: 1401 VVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGV 1580 VGAC+ TLFT K ISGLV+VKY APT YLV S+ G PS ++ SV+D GV + Sbjct: 923 EVGACRYWQTLFTGKAISGLVNVKYCNAPTILRYLVESSAPRGSPSFANNLSVVDNGVLI 744 Query: 1581 GLQPCRPGFFTKSVAYFS* 1637 LQPC P F +SVAYFS* Sbjct: 743 SLQPCMPTRFNRSVAYFS* 687 Score = 54.7 bits (113), Expect(2) = 1e-10 Identities = 38/104 (36%), Positives = 47/104 (45%) Frame = +2 / -2 Query: 1325 LAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVF 1504 LA T Q F IS Y L C V M* L + +Y K IRS +CQ+L T TS+ Sbjct: 999 LANSKTKSQGSFEISQYALNCCPVQ*SGSM*ILANFIYRKSYIRSGQCQVL*RTNNTSIP 820 Query: 1505 SSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 V R +F +*F C *R + A F Q+ I L Sbjct: 819 CRVLRT*RLTFFRQ*FICC**RCIDLLAAMHADTF*QISSILLL 688 Score = 32.2 bits (64), Expect(2) = 1e-10 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +2 / -2 Query: 1220 EIRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 +I S++YCKP+ ++I SCP+ I + T+ Sbjct: 1104 QISSQEYCKPSSGLAIIWTSCPISI*ERTY 1015 Score = 48.7 bits (100), Expect = 1e-04 Identities = 34/109 (31%), Positives = 50/109 (45%) Frame = -2 / +3 Query: 1547 ISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSK 1368 I R R G Y + C +V D +T Y K + + TC++ +L S A+ + Sbjct: 777 IGERR*ASRCGGLYKVSKYCWCVTVLDIDQTGYSFSGK*SLPISTCSHFIALDSS*AHIE 956 Query: 1367 ICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*S 1221 I + WS QV F + +C LGRM R* + VC+I +*S Sbjct: 957 ISQRILGTWSSNLQVRFNSSKCVLRC*LGRMSR*SQVHWRVCSILGS*S 1103 Score = 33.6 bits (67), Expect = 4.1 Identities = 28/88 (31%), Positives = 40/88 (45%) Frame = +1 / -1 Query: 1222 D*VQKILQTHLLNVCHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHILLYAWQL*SEL 1401 D*+ +ILQT HL ILP+ + + H TC DQ + I + A L S + Sbjct: 1102 D*LPRILQTLQWTCDHLDILPNQHLRTHLLELNLTCKFEDQVPRIL*DISICA*LLSSAM 923 Query: 1402 WLVHVKTNTPCLQQRRYQVL*VSNTEEH 1485 HV L ++ Y V +S+T H Sbjct: 922 KWEHVDIGKLYLPEKLYPVWSMSSTVTH 839
>LOC_Os04g53040:12004.t04777:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 11199 Score = 208 bits (449), Expect(2) = 5e-60 Identities = 90/209 (43%), Positives = 136/209 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + Sbjct: 6085 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGK 6264 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA LDDRRST G+ +F G NL+SW ++KQ VSRS+ EA Sbjct: 6265 GLWFKKNGHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 6444 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A++ + +E++W++++L EL + + WCDN A ++ N V H RTKH+EID F Sbjct: 6445 YRAMSVSLSELLWLRNLLSELKLLMNIPMKLWCDNKSAISIANNPVQHDRTKHVEIDRFF 6624 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + +++ +L + F+ S +QVAD TKAL Sbjct: 6625 IKKKLDEGILKLGFVMSGEQVADCLTKAL 6711 Score = 44.6 bits (91), Expect(2) = 5e-60 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 5974 LSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVN 6096 Score = 45.5 bits (93), Expect(3) = 3e-13 Identities = 26/63 (41%), Positives = 32/63 (50%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H +S ALY AS ++ +T CFL E +L P N P V+ LSSR Sbjct: 6506 NSERRFLNHNSSLKLTDIALYSASAVERDTTGCFLLLQETKLPPTNTQ*PEVDLLSSRLL 6327 Query: 1281 AQS 1289 AQS Sbjct: 6326 AQS 6318 Score = 35.4 bits (71), Expect(3) = 3e-13 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = +3 / -2 Query: 1329 LKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLV 1508 L +P + F YL I A * + G+C T TA +SGLV KY PT YL Sbjct: 6278 LNHKPFPGLPFKYLRILYTASM*PLRGSCMYRLTTLTA*VMSGLV*HKYISRPTSL*YLS 6099 Query: 1509 VSTES 1523 + T S Sbjct: 6098 LFTGS 6084 Score = 31.8 bits (63), Expect(3) = 3e-13 Identities = 22/60 (36%), Positives = 28/60 (46%) Frame = +2 / -1 Query: 893 T*SFCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 T*SFC +S L NK +Q K IYL++ CS M + I IVTP+ Sbjct: 6714 T*SFC*TVSYLFPRHNKT*LQNPFI*FFLDKKTIYLHMFCSIMLNWIVSDANSRLIVTPQ 6535
>LOC_Os07g10460:12007.t00920:unspliced-genomic 5-nucleotidase surE, putative, expressed| Length = 9911 Score = 204 bits (441), Expect(2) = 9e-60 Identities = 82/193 (42%), Positives = 129/193 (66%) Frame = -3 / -3 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 Y+ TRPDI++AV+ V ++H P + H RI+RY+K + G+ F K+ V + Sbjct: 5529 YICHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDVEGYC 5350 Query: 1294 NSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQS 1115 ++DW CLDDRRST G+ +F G NL+SW ++KQ+ VSRS+ EA Y++++ + +E++W+++ Sbjct: 5349 DADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKQSVVSRSTAEAEYRSMSMSLSELLWLKN 5170 Query: 1114 MLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIH 935 +L EL + +S + WCDN A ++ N V H RTKH+EID F+ ER+ L++ F++ Sbjct: 5169 LLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDEGTLNLGFVN 4990 Query: 934 SKDQVADGFTKAL 896 S +QVAD TKAL Sbjct: 4989 SGEQVADSLTKAL 4951 Score = 47.3 bits (97), Expect(2) = 9e-60 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / -2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 5686 LSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVN 5564 Score = 63.4 bits (132), Expect(2) = 3e-13 Identities = 43/121 (35%), Positives = 54/121 (44%) Frame = +3 / +2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S LY AS ++ +T CFL + RL P N P V+ LSSR Sbjct: 5156 NSAKRFFNHNNSLKLIDIDLYSASAVERDTTDCFLLLQDTRLPPINTQ*PDVDLLSSRQL 5335 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGL 1460 QS + TS L P+ + F YL I * ++G+C T TA ISGL Sbjct: 5336 PQSASQYPSTSRCPFFLNHMPLPGLAFKYLKILYTTSM*PLLGSCMYRLTTLTA*VISGL 5515 Query: 1461 V 1463 V Sbjct: 5516 V 5518 Score = 32.7 bits (65), Expect(2) = 3e-13 Identities = 24/56 (42%), Positives = 29/56 (51%) Frame = +3 / +2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 AFV SAT S E K + LS K +SIS CFV + T L ++A LSH Sbjct: 4955 AFVKLSATCSPEFTKPKFKVPSSILSLIKKRSISTCFVRSCWTGLLAIFMADLLSH 5122
>LOC_Os07g41380:12007.t03793:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4414 Score = 209 bits (450), Expect(2) = 1e-59 Identities = 90/209 (43%), Positives = 135/209 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + Sbjct: 3722 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGK 3901 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F +S + + ++DWA LDDRRST G+ +F G NL+SW ++KQ VSRS+ EA Sbjct: 3902 GLWFKRSGHLSLEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 4081 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A++ +E++W++++L EL + + WCDN A ++ N V H RTKHIEID F Sbjct: 4082 YRAMSVGLSEMLWLRNLLCELKLLKNTCMKLWCDNKSAINIANNPVQHDRTKHIEIDRFF 4261 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + E++ +L + F+ S +Q+AD TKAL Sbjct: 4262 IKEKLDEGMLKLDFVISGEQIADCLTKAL 4348 Score = 42.8 bits (87), Expect(2) = 1e-59 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KYA +L+ G+ C+P TP+ KL G P++ Sbjct: 3611 LSQRKYALNLLSDTGMLSCRPASTPIEQNLKLCAESGDPVN 3733 Score = 46.0 bits (94), Expect(3) = 2e-13 Identities = 26/63 (41%), Positives = 31/63 (49%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S ALY AS ++ ET CFL + +L P N P V+ LSSR Sbjct: 4143 NSHRRFLNHNISLRPTDIALYSASAVERETTGCFLLLQDTKLPPTNTQYPEVDLLSSRLL 3964 Query: 1281 AQS 1289 AQS Sbjct: 3963 AQS 3955 Score = 41.4 bits (84), Expect(3) = 2e-13 Identities = 27/66 (40%), Positives = 34/66 (51%) Frame = +3 / -2 Query: 1326 LLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYL 1505 LL +P+ + F YL I A * ++G+C T TA ISGLV KY PT YL Sbjct: 3918 LLNHKPLPGLPFKYLKILYTASM*PLLGSCMYRLTTLTA*VISGLV*HKYISRPTSL*YL 3739 Query: 1506 VVSTES 1523 + T S Sbjct: 3738 SLFTGS 3721 Score = 26.3 bits (51), Expect(3) = 2e-13 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 / -2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 ++ S K +SIS+CFV + T L +A LSH Sbjct: 4278 SSFSFIKKRSISICFVRSC*TGLLAILIADLLSH 4177
>LOC_Os12g44200:12012.t04086:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4080 Score = 215 bits (465), Expect(2) = 1e-59 Identities = 88/214 (41%), Positives = 138/214 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D D T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3400 DKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3579 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST +A G + SWS +KQ V+ SS EA Sbjct: 3580 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSSYAFSLGSGMCSWSTKKQNIVALSSAEAE 3759 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A +S N V H RTKHI I +H+ Sbjct: 3760 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHY 3939 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 + E V + + ++F + +Q+AD FTKAL + F Sbjct: 3940 IREAVDRQEVKLKFCRTDEQLADIFTKALSKEKF 4041 Score = 35.9 bits (72), Expect(2) = 1e-59 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEK 1550 + +SQ KYA +++KK + CK TPL EK Sbjct: 3280 IFISQRKYAKNILKKFKMDNCKSVTTPLLPNEK 3378 Score = 47.3 bits (97), Expect(3) = 2e-05 Identities = 27/66 (40%), Positives = 31/66 (46%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D E P A V +SS Sbjct: 3830 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQEHIPEPSEKA*LDVLFISS 3651 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3650 RHPAQS 3633 Score = 25.8 bits (50), Expect(3) = 2e-05 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V S S Sbjct: 3482 ANIISGRVAVKYNKLPTKLL*IVGSALS 3399 Score = 23.5 bits (45), Expect(3) = 2e-05 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ P + FS +KGV LQ FF +AYF Sbjct: 3407 ALSAPYLAFCFSFGNKGVVTDLQLSILNFFRIFLAYF 3297
>LOC_Os05g45550:12005.t04043:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4078 Score = 214 bits (461), Expect(2) = 1e-59 Identities = 88/214 (41%), Positives = 137/214 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D D T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T Sbjct: 3398 DKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYY 3577 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST G+A G + SWS +KQ V+ SS EA Sbjct: 3578 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMWSWSTKKQNIVALSSAEAE 3757 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A ++ N V H RTKHI I +H+ Sbjct: 3758 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHY 3937 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSF 881 + E V + + + F + +Q+AD FTKAL + F Sbjct: 3938 IREAVDRQEVKLEFCRTDEQLADIFTKALSKEKF 4039 Score = 37.7 bits (76), Expect(2) = 1e-59 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + CK TPL EK +G Sbjct: 3278 IFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDG 3394 Score = 50.6 bits (104), Expect(4) = 4e-09 Identities = 27/66 (40%), Positives = 32/66 (48%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D + P A P V +SS Sbjct: 3828 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQDHIPEPSEKA*PDVLFISS 3649 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3648 RHPAQS 3631 Score = 28.6 bits (56), Expect(4) = 4e-09 Identities = 23/56 (41%), Positives = 29/56 (51%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLS 1064 KAFVN SA S N S +T S * I++CFVL+* T + +A LS Sbjct: 4023 KAFVNISANCSSVRQNSNLTSWRSTASRI**YLIAICFVLS*LTGFSLIAIADLLS 3856 Score = 25.8 bits (50), Expect(4) = 4e-09 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V S S Sbjct: 3480 ANIISGRVAVKYNKLPTKLL*IVGSALS 3397 Score = 24.9 bits (48), Expect(4) = 4e-09 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ PS+ FS +KGV LQ FF AYF Sbjct: 3405 ALSAPSLAFCFSFGNKGVVTDLQLSILNFFRIFSAYF 3295
>LOC_Os07g13560:12007.t01221:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6410 Score = 206 bits (444), Expect(2) = 6e-59 Identities = 89/226 (39%), Positives = 137/226 (60%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ L+G L YL TRPDIS+AV+ + +++ P T H RI+RY+K T Sbjct: 5718 DLVDKEAYQRLMGRLIYLCHTRPDISYAVSVMSRYMYDPRTGHLDVVHRILRYLKGTPGK 5897 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA +DDRRS G+ +F G NLISW ++KQA V+RS+ + Sbjct: 5898 GLWFRKNGHLNVEGYCDADWASSMDDRRSASGYCVFVGGNLISWRSKKQAVVARSTAKVE 6077 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y+A+A +E++W++ +L EL + S T CDN A ++ NLV H RTKH+EID F Sbjct: 6078 YRAMALGLSEMVWMRGLLSELRVLRSDTVMLHCDNKSAINIANNLVQHDRTKHVEIDRFF 6257 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 + E++ + +L + +I S +Q+ D TK L + + + +I + Sbjct: 6258 IKEKIDSGVLGLEYIKSCEQLVDCLTKGLGPSEVQSICNKMGMIDI 6395 Score = 43.2 bits (88), Expect(2) = 6e-59 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P+ TP++ +L G +D Sbjct: 5607 LSQRKYVLDLLIDTGMLGCRPSTTPINRNHQLCAQSGDLVD 5729 Score = 62.5 bits (130), Expect(3) = 2e-13 Identities = 56/169 (33%), Positives = 70/169 (41%) Frame = +3 / -2 Query: 906 VNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVL 1085 V S + S + I + + S K SIS C V + TRL +A LS V Sbjct: 6334 VRQSTSCSHDLIYSSPSTPLSIFSLMKNLSISTCLVRSC*TRLFAMLMADLLSQ*SITVS 6155 Query: 1086 ELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERL 1265 L +S + H S A ALY +D T ACFL E+RL P N P + L Sbjct: 6154 LLNTRSSDNKPLIHTISLKPRAIALYSTFAVDRATTACFLLRQEIRLPPTNTQYPDADLL 5975 Query: 1266 SSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGA 1412 SS AQS + T L P V F YL I K* V+G+ Sbjct: 5974 SSILLAQSASQYPSTFRCPFFLNHNPFPGVPFRYLRIL*TTSK*PVLGS 5828 Score = 28.6 bits (56), Expect(3) = 2e-13 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 / -1 Query: 1424 THLVYSKGDIRSCKCQILKSTYQTSV 1501 TH Y GDIRSC +I ++++Q V Sbjct: 5816 THNTYCIGDIRSCVTKIDQTSHQPLV 5739 Score = 22.6 bits (43), Expect(3) = 2e-13 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 / -2 Query: 1569 GVGVGLQPCRPGFFTKSVAYFS*ER 1643 GV +G P P ++S YF *ER Sbjct: 5680 GVVLGRHPSIPVSISRSNTYFL*ER 5606
>LOC_Os01g03830:12001.t00272:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8922 Score = 159 bits (341), Expect(3) = 9e-59 Identities = 69/149 (46%), Positives = 100/149 (67%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 5070 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEY 5249 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5250 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5429 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5430 YVAAASACSQVLWMISTLKDYGLSFSGVP 5516 Score = 69.8 bits (146), Expect(3) = 9e-59 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +3 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5523 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5702 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5703 RFEFLRSELGVI 5738 Score = 38.6 bits (78), Expect(3) = 9e-59 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4941 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 5051 Score = 46.9 bits (96), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -3 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5524 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKDVPRK*QV 5345 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5344 PEVLLRSILHPAKSASEKART 5282 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -3 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5686 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5573
>LOC_Os03g63124:12003.t05531:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7988 Score = 159 bits (341), Expect(3) = 9e-59 Identities = 69/149 (46%), Positives = 100/149 (67%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 5017 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEY 5196 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5197 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5376 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5377 YVAAASACSQVLWMISTLKDYGLSFSGVP 5463 Score = 69.8 bits (146), Expect(3) = 9e-59 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5470 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5649 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5650 RFEFLRSELGVI 5685 Score = 38.6 bits (78), Expect(3) = 9e-59 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4888 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4998 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -1 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5471 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5292 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5291 PEVLLRSILHPAKSASEKART 5229 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -1 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5633 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5520
>LOC_Os05g27060:12005.t02359:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5707 Score = 159 bits (341), Expect(3) = 9e-59 Identities = 69/149 (46%), Positives = 100/149 (67%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 5018 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEY 5197 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5198 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5377 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5378 YVAAASACSQVLWMISTLKDYGLSFSGVP 5464 Score = 69.8 bits (146), Expect(3) = 9e-59 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +2 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5471 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5650 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5651 RFEFLRSELGVI 5686 Score = 38.6 bits (78), Expect(3) = 9e-59 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4889 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4999 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5472 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5293 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5292 PEVLLRSILHPAKSASEKART 5230 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5634 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5521
>LOC_Os06g21670:12006.t01984:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1224 Score = 227 bits (490), Expect = 2e-58 Identities = 91/141 (64%), Positives = 115/141 (81%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYATDL+K+ G+ GCK TPLS+ +KL EG P+ + D+T+YR +VGALQYLTL Sbjct: 801 LTQEKYATDLLKRVGMHGCKEINTPLSTIDKLLAKEGEPLGAEDSTRYRSIVGALQYLTL 980 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDI+F VNKVC +LHAPT++H TA KRI+RY+K +L +GL KS STLVSAFS++DW Sbjct: 981 TRPDIAFPVNKVCQYLHAPTSLH*TAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDADW 1160 Query: 1282 AGCLDDRRSTGGFAIFFGPNL 1220 AGC DDR+STGGFA+F G N+ Sbjct: 1161 AGCPDDRKSTGGFAVFLGANM 1223 Score = 152 bits (326), Expect = 8e-36 Identities = 76/138 (55%), Positives = 87/138 (63%) Frame = +3 / -3 Query: 1224 LGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TV 1403 L PKN ANPPV+ SS HPAQS E ALT VE DL RP YL +RL AV Sbjct: 1219 LAPKNTANPPVDLRSSGHPAQSASENALTRVESDLQIRRPSPKDPLRYLNMRLTAV*CNE 1040 Query: 1404 VGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVG 1583 VGAC+ TLFT K ISGLV+VKY APT YLV S+ G PS ++ S++D GV + Sbjct: 1039 VGACRYWQTLFTGKAISGLVNVKYCNAPTILRYLVESSAPRGSPSFANNLSIVDNGVLIS 860 Query: 1584 LQPCRPGFFTKSVAYFS* 1637 LQPC P F +SVAYFS* Sbjct: 859 LQPCMPTRFNRSVAYFS* 806 Score = 48.7 bits (100), Expect(2) = 2e-08 Identities = 37/104 (35%), Positives = 46/104 (44%) Frame = +2 / -2 Query: 1325 LAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLVYSKGDIRSCKCQILKSTYQTSVF 1504 LA T Q F IS Y L C V M* L + +Y K IRS +CQ+L T TS+ Sbjct: 1118 LANSKTKSQGSFEISQYALNCCLVQ*SGSM*ILANFIYRKSYIRSGQCQVL*RTNNTSIP 939 Query: 1505 SSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQVCCIFFL 1636 V R +F +*F *R + A F Q+ I L Sbjct: 938 CRVLRT*RLTFFRQ*FIYC**RCIDLLAAMHADTF*QISSILLL 807 Score = 31.3 bits (62), Expect(2) = 2e-08 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +2 / -2 Query: 1223 IRSKKYCKPTC*TSVI*ASCPV*IRKSTH 1309 I S++YCKP+ ++I SCP+ I + T+ Sbjct: 1220 ISSQEYCKPSSGLAIIWTSCPISI*ERTY 1134 Score = 46.9 bits (96), Expect = 4e-04 Identities = 32/104 (30%), Positives = 47/104 (45%) Frame = -2 / +2 Query: 1547 ISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSK 1368 I R R G Y + C +V D +T Y K + + TC++ +L S A+ + Sbjct: 896 IGERR*ASRCGGLYKVSKYCWCVTVLDIDQTGYSFSGK*SLPISTCSHFIALDSS*AHIE 1075 Query: 1367 ICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNI 1236 I + WS QV F + +C LGRM R* + VC+I Sbjct: 1076 ISQRILGTWSSNLQVRFNSSKCVLRC*LGRMSR*SQVHWRVCSI 1207
>LOC_Os03g01684:12003.t00063:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 11895 Score = 157 bits (338), Expect(3) = 2e-58 Identities = 68/149 (45%), Positives = 100/149 (67%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KR+ RY+K TL Sbjct: 5017 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEY 5196 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5197 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5376 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5377 YVAAASACSQVLWMISTLKDYGLSFSGVP 5463 Score = 69.8 bits (146), Expect(3) = 2e-58 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5470 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5649 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5650 RFEFLRSELGVI 5685 Score = 38.6 bits (78), Expect(3) = 2e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4888 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4998 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5471 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5292 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5291 PEVLLRSILHPAKSASEKART 5229 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5633 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5520
>LOC_Os04g57570:12004.t05223:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10992 Score = 157 bits (338), Expect(3) = 2e-58 Identities = 68/149 (45%), Positives = 100/149 (67%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KR+ RY+K TL Sbjct: 5018 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEY 5197 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5198 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5377 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5378 YVAAASACSQVLWMISTLKDYGLSFSGVP 5464 Score = 69.8 bits (146), Expect(3) = 2e-58 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +2 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5471 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5650 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5651 RFEFLRSELGVI 5686 Score = 38.6 bits (78), Expect(3) = 2e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4889 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4999 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -1 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5472 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5293 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5292 PEVLLRSILHPAKSASEKART 5230 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -1 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5634 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5521
>LOC_Os06g41340:12006.t03826:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 10475 Score = 157 bits (338), Expect(3) = 2e-58 Identities = 69/149 (46%), Positives = 100/149 (67%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 7613 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEY 7792 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 7793 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 7972 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 7973 YVAAASACSQVLWMISTLKDYGLFFSGVP 8059 Score = 69.8 bits (146), Expect(3) = 2e-58 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +2 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 8066 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 8245 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 8246 RFEFLRSELGVI 8281 Score = 38.6 bits (78), Expect(3) = 2e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 7484 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 7594 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -3 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 8067 QSRGTPEKNRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 7888 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 7887 PEVLLRSILHPAKSASEKART 7825 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -3 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 8229 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 8116
>LOC_Os03g13260:12003.t01121:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7989 Score = 157 bits (338), Expect(3) = 2e-58 Identities = 68/149 (45%), Positives = 100/149 (67%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KR+ RY+K TL Sbjct: 5017 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEY 5196 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 5197 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5376 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5377 YVAAASACSQVLWMISTLKDYGLSFSGVP 5463 Score = 69.8 bits (146), Expect(3) = 2e-58 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5470 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5649 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5650 RFEFLRSELGVI 5685 Score = 38.6 bits (78), Expect(3) = 2e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4888 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4998 Score = 47.3 bits (97), Expect(2) = 1e-06 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5471 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5292 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 5291 PEVLLRSILHPAKSASEKART 5229 Score = 26.3 bits (51), Expect(2) = 1e-06 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5633 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5520
>LOC_Os02g20470:12002.t01839:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5772 Score = 156 bits (335), Expect(3) = 6e-58 Identities = 68/149 (45%), Positives = 99/149 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 4852 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEY 5031 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST F G +L+SWS+RKQ++V++S+ EA Sbjct: 5032 GIWYSCSSALSVRAFSDADFAGCKIDRKSTSSTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5211 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5212 YVAAASACSQVLWMISTLKDYGLSFSGVP 5298 Score = 69.8 bits (146), Expect(3) = 6e-58 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5305 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5484 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5485 RFEFLRSELGVI 5520 Score = 38.6 bits (78), Expect(3) = 6e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4723 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4833 Score = 43.2 bits (88), Expect(2) = 2e-05 Identities = 29/81 (35%), Positives = 37/81 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5306 QSRGTPEKDRP*SFRVEIIQRT*LQALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5127 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 V S HPA+S EKA T Sbjct: 5126 LEVLLRSILHPAKSASEKART 5064 Score = 26.3 bits (51), Expect(2) = 2e-05 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +3 / -2 Query: 903 FVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVL 1016 FV SA + N + F+TLS K ISMC VL Sbjct: 5468 FVKMSANCFSDSTNSSTMVPFSTLSRRKWYRISMCLVL 5355
>LOC_Os08g30670:12008.t02819:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9639 Score = 154 bits (331), Expect(3) = 8e-58 Identities = 66/149 (44%), Positives = 99/149 (66%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 4997 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLKY 5176 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++++AGC DR+ST G F G +L+SWS+RKQ+++++S+ EA Sbjct: 5177 GIWYSCSSALSVRAFSDANFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSIAQSTAEAE 5356 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+ ++V+W+ S LK+ G+ S P Sbjct: 5357 YVAAASTCSQVLWMISTLKDYGLSFSGVP 5443 Score = 71.2 bits (149), Expect(3) = 8e-58 Identities = 30/72 (41%), Positives = 44/72 (61%) Frame = -3 / +2 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN+ A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 5450 CDNISAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 5629 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5630 RFEFLRSELGVI 5665 Score = 38.6 bits (78), Expect(3) = 8e-58 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +2 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4868 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4978 Score = 40.0 bits (81), Expect(2) = 2e-05 Identities = 27/81 (33%), Positives = 35/81 (43%) Frame = +3 / -1 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A+A Y AS +D C D E + P+ Sbjct: 5451 QSKGTPEKDRP*SFRVEIIQRT*LHVLAAATYSASAVD*AIEDCLREDQETKEVPRK*QV 5272 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+ EKA T Sbjct: 5271 PEVLLRSILHPAKLASEKART 5209 Score = 29.0 bits (57), Expect(2) = 2e-05 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 / -3 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVL 1009 FCK + L F NK N +S K+ YLNVL Sbjct: 5614 FCKNVCQLFFRFNKL*HNGTFLNIVSEKVVPYLNVL 5507
>LOC_Os11g45908:12011.t04116:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3891 Score = 204 bits (439), Expect(2) = 1e-57 Identities = 90/209 (43%), Positives = 131/209 (62%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D VD Y+ LVG L YL TRPDIS+AV+ V ++H P T H I+RY+K T Sbjct: 3232 DPVDEEAYQRLVGRLIYLCHTRPDISYAVSVVSSYMHDPRTSHLDVVHMILRYLKGTPGK 3411 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA ++DRRST G+ +F G NL+SW ++KQA V+RS+ EA Sbjct: 3412 GLWFRKNGHLNVEGYCDADWASGMNDRRSTSGYCVFVGGNLVSWRSKKQAVVARSTAEAE 3591 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A+A +E++W++S+L EL + + CDN A ++ N V H RTKH+EID F Sbjct: 3592 YIAMALGLSEMLWMRSLLSELRVLRNDNVMLHCDNKSAINIANNPVQHDRTKHVEIDRFF 3771 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKAL 896 + E++ + +L + +I S +Q+AD TK L Sbjct: 3772 IKEKIDSGMLRLEYIKSCEQLADCLTKGL 3858 Score = 41.4 bits (84), Expect(2) = 1e-57 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -3 / +1 Query: 1639 SQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 SQ KY DL+ G+ GC P TP+ +L G P+D Sbjct: 3124 SQRKYILDLLTDTGMIGCCPCITPIDRNHQLCAQSGDPVD 3243 Score = 66.1 bits (138), Expect = 7e-10 Identities = 49/122 (40%), Positives = 56/122 (45%) Frame = +3 / -2 Query: 1125 HMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKA 1304 H S A A+Y AS +D T ACFL E RL P N P V+ LS AQS + Sbjct: 3629 HSISLKPKAIAMYSASAVDRATTACFLLRQETRLPPTNTQ*PDVDLLSFIPLAQSASQYP 3450 Query: 1305 LTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RA 1484 T L P V F YL I K* V G+C T TA EISGLV + + Sbjct: 3449 STFRCPFFLNHNPFPGVPFRYLRII*TTSK*LVRGSCI*LLTTLTA*EISGLV*QR*IKR 3270 Query: 1485 PT 1490 PT Sbjct: 3269 PT 3264
>LOC_Os10g01750:12010.t00072:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4981 Score = 212 bits (457), Expect(2) = 1e-57 Identities = 90/229 (39%), Positives = 143/229 (62%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D D T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3401 DKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3580 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST G+A G + SWS +K V+ SS EA Sbjct: 3581 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMCSWS*KK*NIVALSSAEAE 3760 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD A +S N V H RTKHI I +H+ Sbjct: 3761 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDGKSAIAISENPVSHDRTKHIAIKYHY 3940 Query: 982 V*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL*LR 836 + E V + + + F + +Q+AD FTKAL + F + + + K *++ Sbjct: 3941 IREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFVRDRELIGVCKK*IK 4087 Score = 32.7 bits (65), Expect(2) = 1e-57 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + K TPL EK +G Sbjct: 3281 IFISQRKYAENILKKFKMDNYKSVTTPLLPNEKQKARDG 3397 Score = 45.1 bits (92), Expect(2) = 5e-04 Identities = 27/66 (40%), Positives = 31/66 (46%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ F D E P A P V +SS Sbjct: 3831 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFYFF*DQEHIPEPSEKA*PDVLFISS 3652 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3651 RHPAQS 3634 Score = 25.8 bits (50), Expect(2) = 5e-04 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V S S Sbjct: 3483 ANIISGRVAVKYNKLPTKLL*IVGSALS 3400
>LOC_Os10g26830:12010.t02093:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5704 Score = 160 bits (343), Expect(3) = 2e-57 Identities = 66/151 (43%), Positives = 100/151 (66%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 5015 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5194 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5195 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5374 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ GI K P F Sbjct: 5375 YVAAASCCSQILWLLSTLKDYGITFEKVPLF 5467 Score = 68.0 bits (142), Expect(3) = 2e-57 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5465 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5644 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5645 NRFAFLRGELGVI 5683 Score = 35.4 bits (71), Expect(3) = 2e-57 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4907 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4996 Score = 77.6 bits (163), Expect(2) = 3e-17 Identities = 55/152 (36%), Positives = 71/152 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G IP SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5469 QKRGTFSKVIP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5290 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*H 1427 P V LS P +S E L +E ++ P SV F YL IRL A + G N Sbjct: 5289 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA*RCEARGEA*NRA 5110 Query: 1428 TLFTAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +VKY + P LY ST S Sbjct: 5109 HKHTANCMSGLEAVKYNKDPIILLYSF*STAS 5014 Score = 31.8 bits (63), Expect(2) = 3e-17 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + KMK +NVLC+ + + I + ++I+T E Sbjct: 5632 FSENISNLQLGVQKL*LNISFLNMIPQKMKTNINVLCA*VLNRILSNIDSTSIITKERYF 5453 Query: 1082 LRA 1090 L++ Sbjct: 5452 LKS 5444
>LOC_Os10g09810:12010.t00794:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6398 Score = 84.9 bits (179), Expect(5) = 2e-57 Identities = 37/78 (47%), Positives = 49/78 (62%) Frame = -3 / +3 Query: 1087 SKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGF 908 S+ +CDNV A YLS N V H RTKH+EID HFV +RVA + + + + Q AD F Sbjct: 6099 SRATLVYCDNVSAIYLSTNPVQHQRTKHVEIDLHFVHDRVAAGSVRVLHVPTTSQYADIF 6278 Query: 907 TKALRTQSFEDFKHNLNL 854 TK L T F +F+ +LN+ Sbjct: 6279 TKGLPTSIFVEFRSSLNV 6332 Score = 62.9 bits (131), Expect(5) = 2e-57 Identities = 26/55 (47%), Positives = 37/55 (67%) Frame = -3 / +3 Query: 1408 PTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGF 1244 P H A KRI+RYV+ TL+ L+ +S +T + A+S++DWAGC D R+ST F Sbjct: 5820 PRDSHRAALKRILRYVRGTLDYRLHIRRSATTDLMAYSDADWAGCPDTRKSTWSF 5984 Score = 53.3 bits (110), Expect(5) = 2e-57 Identities = 22/37 (59%), Positives = 25/37 (67%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAP 1406 VD T L GAL YLT TRPDIS+AV +VC +H P Sbjct: 5713 VDPTDCHSLAGALHYLTFTRPDISYAVQQVCLHMHDP 5823 Score = 50.1 bits (103), Expect(5) = 2e-57 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = -3 / +3 Query: 1216 SWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKT 1079 +WS ++Q TVSRSS EA Y+ +AN AE W+ +L EL S T Sbjct: 5973 TWSFKRQNTVSRSSDEAEYRVVANTVAETCWLCQLLHELTPPSRAT 6110 Score = 47.8 bits (98), Expect(5) = 2e-57 Identities = 16/46 (34%), Positives = 31/46 (67%) Frame = -3 / +1 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + + L LSQ +Y+ +++++ G+ CKP TP+ + KLS +G+P+ Sbjct: 5575 DSSGLLLSQHQYSIEVLERAGMSDCKPCSTPVDTNAKLSSSDGSPV 5712 Score = 29.0 bits (57), Expect(2) = 0.11 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +3 / -1 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS D+F+++ GV GLQ P S+ Y+ * R Sbjct: 5708 GEPSEEDNFALVSTGVEHGLQSDMPARSRTSMLYWC*LR 5592 Score = 27.2 bits (53), Expect(2) = 0.11 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +3 / -1 Query: 1401 VVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 + G+C T TA EISG V VK RAP + Sbjct: 5828 IPGSCMWRQTC*TA*EISGRVKVK*CRAPAK 5736
>LOC_Os04g44190:12004.t03958:unspliced-genomic expressed protein| Length = 7937 Score = 152 bits (326), Expect(3) = 2e-57 Identities = 63/141 (44%), Positives = 96/141 (68%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D V+ +Y+ LVG L YL TRPDI++AV+ V ++H P + H A RI+RY+K + Sbjct: 5259 DPVNKERYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGK 5438 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 GL F K+ V + ++DWA LDDRRST G+ +F G NL+SW ++KQ VSRS+ EA Sbjct: 5439 GLWFKKNGHLGVEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAE 5618 Query: 1162 YKALANATAEVIWVQSMLKEL 1100 Y+A++ + +E++W++++L EL Sbjct: 5619 YRAMSVSLSELLWLRNLLSEL 5681 Score = 66.1 bits (138), Expect(3) = 2e-57 Identities = 28/58 (48%), Positives = 38/58 (65%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKAL 896 WCDN A ++ N V H RTKH+EID F+ E++ +L + F+ S +QVAD TKAL Sbjct: 5711 WCDNKSAISIANNPVQHDRTKHVEIDRFFIKEKLDEGILKLGFVMSGEQVADCLTKAL 5884 Score = 44.6 bits (91), Expect(3) = 2e-57 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 5148 LSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDPVN 5270 Score = 45.5 bits (93), Expect(3) = 1e-13 Identities = 26/63 (41%), Positives = 32/63 (50%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H +S ALY AS ++ +T CFL E +L P N P V+ LSSR Sbjct: 5680 NSERRFLNHNSSLKLTDIALYSASAVERDTTGCFLLLQETKLPPTNTQ*PEVDLLSSRLL 5501 Query: 1281 AQS 1289 AQS Sbjct: 5500 AQS 5492 Score = 35.4 bits (71), Expect(3) = 1e-13 Identities = 25/65 (38%), Positives = 31/65 (47%) Frame = +3 / -2 Query: 1329 LKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLV 1508 L +P + F YL I A * + G+C T TA +SGLV KY PT YL Sbjct: 5452 LNHKPFPGLPFKYLRILYTASM*PLRGSCMYRLTTLTA*VMSGLV*HKYISRPTSL*YLS 5273 Query: 1509 VSTES 1523 + T S Sbjct: 5272 LFTGS 5258 Score = 33.1 bits (66), Expect(3) = 1e-13 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 / -3 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 KAFV SAT S + K ++ S K +SIS CFV + T L +A LSH Sbjct: 5883 KAFVKQSATCSPDITKPSFKIPSSSFSLIKKRSISTCFVRSC*TGLLAMLIADLLSH 5713
>LOC_Os02g01840:12002.t00084:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4118 Score = 213 bits (459), Expect(2) = 4e-57 Identities = 86/133 (64%), Positives = 109/133 (81%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTL 1463 L+QEKYA+DL+K+ G+ GCKP TP+S++EKLS GT + D T+Y+ +VGALQ LTL Sbjct: 3678 LTQEKYASDLLKRVGMSGCKPVATPMSTSEKLSAHNGTELGEHDATRYKSIVGALQNLTL 3857 Query: 1462 TRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDW 1283 TRPDISFAVNKVC FLHAPT H+ A KRI+RYVK ++++GL ++S STLVSAFS++DW Sbjct: 3858 TRPDISFAVNKVCQFLHAPTLQHWMAVKRILRYVKSSVDLGLKINRSSSTLVSAFSDADW 4037 Query: 1282 AGCLDDRRSTGGF 1244 AG +DDRRSTGGF Sbjct: 4038 AGSVDDRRSTGGF 4076 Score = 30.4 bits (60), Expect(2) = 4e-57 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -3 / +1 Query: 1246 FAIFFGPNLISWSA 1205 FA+F G NL+SWSA Sbjct: 4075 FAVFLGSNLVSWSA 4116 Score = 153 bits (328), Expect(2) = 6e-37 Identities = 76/132 (57%), Positives = 87/132 (65%) Frame = +3 / -2 Query: 1239 IANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACK 1418 + PPV+ LSS PAQS EKALT VE DLL FRP + TYL+I L A++ VGACK Sbjct: 4081 LQKPPVDLLSSTDPAQSASEKALTRVEEDLLIFRPRSTEDLTYLSILLTAIQCCKVGACK 3902 Query: 1419 N*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCR 1598 N* TLFTAKEISGLV VK+ +APT LYLV S VP D+FS +D GV GL P Sbjct: 3901 N*QTLFTAKEISGLVKVKFCKAPTILLYLVASCSPSSVPL*ADNFSEVDIGVATGLHPDI 3722 Query: 1599 PGFFTKSVAYFS 1634 P F +S AYFS Sbjct: 3721 PTLFNRSDAYFS 3686 Score = 22.6 bits (43), Expect(2) = 6e-37 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 / -3 Query: 1205 SRP*NEIRSKKYCK 1246 S P*+ I SKKYCK Sbjct: 4116 STP*H*I*SKKYCK 4075 Score = 70.7 bits (148), Expect = 3e-11 Identities = 38/90 (42%), Positives = 52/90 (57%) Frame = +2 / -1 Query: 1244 KPTC*TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KL 1423 K +C +SVI SCP+ IRKST+K RR +* I R +IS Y L + M*KL Sbjct: 4076 KTSCRSSVIYRSCPICIRKSTNKSRRRSVNL*AKINRGLNISQYPLNCHPML*SRSM*KL 3897 Query: 1424 THLVYSKGDIRSCKCQILKSTYQTSVFSSV 1513 T L+Y K +I S + Q+L+S T + S + Sbjct: 3896 TDLIYCKRNIWSSQSQVLQSPNNTLISSGI 3807 Score = 60.6 bits (126), Expect(2) = 5e-10 Identities = 30/69 (43%), Positives = 39/69 (56%) Frame = -2 / +2 Query: 1457 T*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGR 1278 T Y C K G+ VFTC+ ++L ++IC W K Q+ FY+C CFF* RLGR Sbjct: 3863 TRYFFCSK*GLSVFTCSYFTTLDGS*EDTEIC*VLC*SWPKD*QIFFYSC*CFF*CRLGR 4042 Query: 1277 MPR*QTFNR 1251 + R*Q R Sbjct: 4043 ICR*QKIYR 4069 Score = 24.4 bits (47), Expect(2) = 5e-10 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -1 / +2 Query: 1245 LQYFLDLISFHGLL 1204 LQYFLD I HG+L Sbjct: 4076 LQYFLDQI*CHGVL 4117 Score = 38.2 bits (77), Expect = 0.17 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = +1 / -3 Query: 1264 CHLGILPSLN*KKHSQV*KGTC*NLDQYSAYVSHI 1368 CHL ILP+L+ KKH Q *K C*+L Q HI Sbjct: 4056 CHLQILPNLHQKKH*QE*KKIC*SLGQDQQRT*HI 3952
>LOC_Os07g27080:12007.t02403:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5699 Score = 158 bits (340), Expect(3) = 5e-57 Identities = 65/151 (43%), Positives = 100/151 (66%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 5010 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCVCFQASPRASHRQAVKRIMRYLNHTLEF 5189 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +SN+D+ GC +R+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5190 GIWYSTSSSICLSGYSNADFGGCRINRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5369 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5370 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5462 Score = 68.4 bits (143), Expect(3) = 5e-57 Identities = 29/73 (39%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN ++ NLV H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5460 FCDNTSVINIAKNLVQHSRTKHIDICFHFLRDHVEKGDVELQFLDTKIQIADIFTKPLDS 5639 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 5640 NRFAFLHGELGII 5678 Score = 34.5 bits (69), Expect(3) = 5e-57 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = -3 / +3 Query: 1660 NKNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 N + + KY DL+++ ++ CKP TP+ ST L Sbjct: 4878 NTSRYFCASTKYTKDLLRRFKMENCKPISTPIGSTAVL 4991 Score = 59.3 bits (123), Expect(3) = 2e-14 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5464 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5285 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V L P +S LE L +E ++ P SV F YL IRL A Sbjct: 5284 PLVLFLLILQPPKSALEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5144 Score = 35.0 bits (70), Expect(3) = 2e-14 Identities = 25/59 (42%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA * F N S S F+T S K*K ISMCFV TR + LS ++ Sbjct: 5632 KGLVKISAI*IFVSKNCNSTSPFST*SLRK*KQISMCFVREC*TRFLAMLITLVLSQKR 5456 Score = 23.1 bits (44), Expect(3) = 2e-14 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5095 TANCMSGLEAVRYNKDPIILLYSF*STAS 5009
>LOC_Os12g29360:12012.t02645:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5685 Score = 158 bits (339), Expect(3) = 5e-57 Identities = 64/151 (42%), Positives = 100/151 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4996 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5175 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ+++++S+ E+ Sbjct: 5176 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSIAQSTAESE 5355 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5356 YVAAASCCSQILWLLSTLKDYGLTFEKIPLF 5448 Score = 68.0 bits (142), Expect(3) = 5e-57 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5446 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5625 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5626 NRFAFLRGELGVI 5664 Score = 35.4 bits (71), Expect(3) = 5e-57 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4888 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4977 Score = 57.9 bits (120), Expect(3) = 3e-13 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G+ P SF +D + A+A Y S +D + CFL DH + P+ Sbjct: 5450 QKRGIFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*AILDCFLEDHAINDVPRK*HV 5271 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5270 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5130 Score = 31.8 bits (63), Expect(3) = 3e-13 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5613 FSENISNLQLGVQKLQLNISFLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKERYF 5434 Query: 1082 LRA 1090 L++ Sbjct: 5433 LKS 5425 Score = 23.1 bits (44), Expect(3) = 3e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5081 TANCMSGLEAVRYNKDPIILLYSF*STAS 4995
>LOC_Os05g24200:12005.t02077:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4409 Score = 158 bits (340), Expect(3) = 7e-57 Identities = 65/151 (43%), Positives = 100/151 (66%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 3720 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 3899 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 3900 GIWYSTSSSICLSGYSDADFEGCRIDRKSTSGTCHFIGTSLIAWSSRKQSSVAQSTAESE 4079 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 4080 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 4172 Score = 64.3 bits (134), Expect(3) = 7e-57 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+ TKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 4170 FCDNTSAINIAKNPVQHSCTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 4349 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 4350 NRFAFLRVELGII 4388 Score = 38.2 bits (77), Expect(3) = 7e-57 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLME 1535 Q KY DL+++ ++ CKP TP+ ST L L E Sbjct: 3612 QTKYTKDLLRRFKMENCKPISTPIGSTAVLDLDE 3713 Score = 57.9 bits (120), Expect(3) = 2e-12 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P Sbjct: 4174 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPIK*HV 3995 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P++S E L +E ++ P SV F YL IRL A Sbjct: 3994 PLVLFLSILQPSKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 3854 Score = 29.0 bits (57), Expect(3) = 2e-12 Identities = 19/39 (48%), Positives = 21/39 (53%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K K ISMCFV Sbjct: 4342 KGLVKISAICNFVSKNCNSTSPFST*SLKKWKRISMCFV 4226 Score = 23.1 bits (44), Expect(3) = 2e-12 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 3805 TANCMSGLEAVRYNKDPIILLYSF*STAS 3719
>LOC_Os05g29174:12005.t02566:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1065 Score = 155 bits (333), Expect(3) = 1e-56 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D+VD +YR ++G+L YLT +R DI FAV F +P H A K+I+RY+ HTL Sbjct: 376 DAVDQKEYRSMIGSLLYLTTSRSDIQFAVCLCARFQASPRASHRQAVKQIMRYLNHTLEF 555 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 556 GILYSTSSSICLSGYSDADFRGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 735 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 736 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 828 Score = 69.3 bits (145), Expect(3) = 1e-56 Identities = 29/73 (39%), Positives = 47/73 (64%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK+L + Sbjct: 826 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKSLDS 1005 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 1006 NRFAFLRGELGII 1044 Score = 35.9 bits (72), Expect(3) = 1e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 268 QTKYTKDLLRRFKMENCKPISTPIGSTAML 357 Score = 56.1 bits (116), Expect(2) = 4e-09 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 830 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRKWHV 651 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL I L A Sbjct: 650 PLVLFLSILQPLKSASEYPLKHIEDEVEYKIPNSSV*FKYLIICLTA 510 Score = 25.8 bits (50), Expect(2) = 4e-09 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + N + K+K +NVL + + + I + ++I+T E Sbjct: 993 FSENISNLQLGVQKLQLNISFLNMIPQKVKTNINVLGA*VLNRILSNIDSTSIITKE 823
>LOC_Os06g27460:12006.t02451:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4636 Score = 158 bits (339), Expect(3) = 1e-56 Identities = 65/151 (43%), Positives = 100/151 (66%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 3947 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHR*AVKRIIRYLNHTLEF 4126 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 4127 GILYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAES* 4306 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 4307 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 4399 Score = 66.6 bits (139), Expect(3) = 1e-56 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V + ++++F+ +K Q+ D FTK L + Sbjct: 4397 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKEDVELQFLDTKLQITDIFTKPLDS 4576 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 4577 NRFAFLHGELGII 4615 Score = 35.4 bits (71), Expect(3) = 1e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 3839 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 3928 Score = 57.9 bits (120), Expect(3) = 3e-14 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 4401 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATY*DSAVD*ATLDCFLEDHAINDVPRK*HV 4222 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4221 PLVLFLSILQPPKSASEYPLKHIEDEVEYKIPNSSV*FKYLIIRLTA 4081 Score = 35.4 bits (71), Expect(3) = 3e-14 Identities = 19/63 (30%), Positives = 34/63 (53%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K F+ N + K+K +NVLC+ + + I + ++I+T E Sbjct: 4564 FSENISNLQLCVQKLQFNIFLLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKERYF 4385 Query: 1082 LRA 1090 L++ Sbjct: 4384 LKS 4376 Score = 23.1 bits (44), Expect(3) = 3e-14 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 4032 TANCMSGLEAVRYNKDPIILLYSF*STAS 3946
>LOC_Os05g31600:12005.t02757:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass, expressed| Length = 4164 Score = 106 bits (227), Expect(3) = 3e-56 Identities = 42/82 (51%), Positives = 58/82 (70%) Frame = -3 / +1 Query: 1264 RRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSS 1085 RRST G+ IF G NL+SWS+++Q TVSRSS EA Y+A+A+A AE W++ +L+EL S Sbjct: 2662 RRSTSGYCIFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHAVAECCWLRQLLQELHAPIS 2841 Query: 1084 KTPCFWCDNVGATYLSANLVFH 1019 +CDNV A Y++AN + H Sbjct: 2842 TATVVFCDNVSAVYMTANPIHH 2907 Score = 102 bits (217), Expect(3) = 3e-56 Identities = 41/82 (50%), Positives = 55/82 (67%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D +YR L GALQYLTLTRP+I++AV +VC F+H P H KRI RY+K +L+ L+ Sbjct: 2415 DPYEYRSLAGALQYLTLTRPEIAYAVQQVCLFMHNPHEPHLALVKRIPRYIKGSLSASLH 2594 Query: 1333 FSKSPSTLVSAFSNSDWAGCLD 1268 P + A+S++DWAGC D Sbjct: 2595 IGTGPVGSLIAYSDADWAGCPD 2660 Score = 50.1 bits (103), Expect(3) = 3e-56 Identities = 24/51 (47%), Positives = 31/51 (60%) Frame = -3 / +3 Query: 1012 TKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNL 860 TK+IEID HFV E+VA + + + S Q AD TK L Q F DF+ +L Sbjct: 2913 TKYIEIDIHFVREKVALGQVRVLHVPSTHQFADIMTKGLPVQLFTDFRSSL 3065 Score = 48.3 bits (99), Expect(2) = 7e-10 Identities = 29/71 (40%), Positives = 39/71 (54%) Frame = +3 / -2 Query: 1050 APTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLG 1229 A TLS + +E+ +S+S + SA A A+A Y AS LD ETV L D + RL Sbjct: 2876 ALTLSQKTTVAVEMGACSSWSSWRSQQHSATA*ATARYSASALDRETVV*RLEDQDTRLS 2697 Query: 1230 PKNIANPPVER 1262 P+ + P VER Sbjct: 2696 PRKMQ*PEVER 2664 Score = 36.3 bits (73), Expect(2) = 7e-10 Identities = 20/43 (46%), Positives = 23/43 (53%) Frame = +3 / -3 Query: 1374 IRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLY 1502 +RL +* G C HT TA ISG V V+Y AP R LY Sbjct: 2554 MRLTKAR*GSWGLCMKRHTC*TA*AISGRVRVRYWSAPARLLY 2426
>LOC_Os07g12410:12007.t01112:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5688 Score = 156 bits (336), Expect(3) = 5e-56 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P H A KRI+RY+ HTL Sbjct: 4999 EAVDQKEYRSMIGSLLYLTASRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5178 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5179 GIWYSTSSSICLSGYSDADFGGCRIDRKSTNGTCHFLGMSLIAWSSRKQSSVAQSTAESE 5358 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5359 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5451 Score = 66.1 bits (138), Expect(3) = 5e-56 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +C+N A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5449 FCNNTSAINIAKNPVKHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5628 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5629 NRFAFLRGELGII 5667 Score = 35.4 bits (71), Expect(3) = 5e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4891 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4980 Score = 32.7 bits (65), Expect = 7.8 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K N + K+K +NVLC+ M + I V ++I+T E Sbjct: 5616 FSENISNLQLGVQKLQFNISFLNMIPQKVKTNINVLCA*MFNRILSNVNSTSIITKERYF 5437 Query: 1082 LRA 1090 L++ Sbjct: 5436 LKS 5428
>LOC_Os03g42610:12003.t03664:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5664 Score = 154 bits (330), Expect(3) = 5e-56 Identities = 63/151 (41%), Positives = 99/151 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RP+I FAV F +P H A KRI+RY+ HTL Sbjct: 4975 EAVDQKEYRSMIGSLLYLTASRPEIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5154 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++++ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5155 GIWYSTSSSLCLSGYSDANFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5334 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK G+ K P F Sbjct: 5335 YVAAASCCSQILWLLSTLKNYGLTFEKVPLF 5427 Score = 68.9 bits (144), Expect(3) = 5e-56 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ NLV H+RTKH++I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5425 FCDNTSAINIAKNLVQHSRTKHVDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5604 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 5605 NCFTFLCGELGII 5643 Score = 35.4 bits (71), Expect(3) = 5e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4867 QTKYTKDLLRRFKMENCKPISTPIDSTAVL 4956 Score = 51.5 bits (106), Expect(3) = 1e-11 Identities = 36/107 (33%), Positives = 47/107 (43%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P F +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5429 QKRGTFSKVRP*FFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5250 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P + E L E ++ P SV F YL IRL A Sbjct: 5249 PLVLFLSILQPPKLASEYPLKHKEDEVEYQIPNSSV*FKYLIIRLTA 5109 Score = 31.8 bits (63), Expect(3) = 1e-11 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + N + K+K +NVLC+ + + I V ++I+T E Sbjct: 5592 FSENISNLQLGVQKLQFNISLLNMIPQKVKTNINVLCA*VLNKILSNVNSTSIITKE 5422 Score = 24.4 bits (47), Expect(3) = 1e-11 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA ISGL +V+Y + P LY ST S Sbjct: 5060 TANCISGLEAVRYNKDPIILLYSF*STAS 4974
>LOC_Os04g53520:12004.t04825:unspliced-genomic expressed protein| Length = 14083 Score = 192 bits (413), Expect(2) = 6e-56 Identities = 77/186 (41%), Positives = 123/186 (66%) Frame = -3 / +2 Query: 1453 DISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGC 1274 DI++AV+ V ++H P + H RI+RY+K + G+ F K+ V + ++DW C Sbjct: 10562 DITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKKNGHLDVEGYCDADWGSC 10741 Query: 1273 LDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGI 1094 LDD RST G+ +F G NL+SW ++KQ+ VSRS+ EA Y++++ + +E++W++++L EL + Sbjct: 10742 LDDMRSTSGYCVFIGGNLVSWRSKKQSVVSRSTAEAEYRSMSMSLSELLWLKNLLAELKL 10921 Query: 1093 KSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVAD 914 +S + WCDN A ++ N V H RTKH+EID F+ ER+ L++ F++S +QVAD Sbjct: 10922 STSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMDEGTLNLGFVNSGEQVAD 11101 Query: 913 GFTKAL 896 TKAL Sbjct: 11102 SLTKAL 11119 Score = 47.3 bits (97), Expect(2) = 6e-56 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 LSQ KY DL+ G+ GC+P TP+ KL G P++ Sbjct: 10381 LSQRKYVLDLLSDTGMLGCRPASTPIEQNHKLCAESGDPVN 10503 Score = 54.7 bits (113), Expect(2) = 1e-10 Identities = 38/118 (32%), Positives = 51/118 (43%) Frame = +3 / -2 Query: 1101 NSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHP 1280 NS H S LY AS ++ +T CFL + +L P N P V+ +SSR Sbjct: 10914 NSAKRFFNHNNSLKLIDIDLYSASAVERDTTDCFLLLQDTKLPPINTQ*PDVDLISSRQL 10735 Query: 1281 AQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEIS 1454 QS + TS L P+ + F YL I * ++G+C T TA IS Sbjct: 10734 PQSASQYPSTSRCPFFLNHMPLPGLAFKYLKILYTTSM*PLLGSCMYRLTTLTA*VIS 10561 Score = 32.7 bits (65), Expect(2) = 1e-10 Identities = 24/56 (42%), Positives = 29/56 (51%) Frame = +3 / -2 Query: 900 AFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSH 1067 AFV SAT S E K + LS K +SIS CFV + T L ++A LSH Sbjct: 11115 AFVKLSATCSPEFTKPKFKVPSSILSLIKKRSISTCFVRSCWTGLLAIFMADLLSH 10948
>LOC_Os11g01970:12011.t00093:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5345 Score = 155 bits (332), Expect(3) = 6e-56 Identities = 62/151 (41%), Positives = 100/151 (66%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT +RPDI FA+ F +P H A KRI+RY+ HTL Sbjct: 4656 EAIDQKEYRSMIGSLLYLTASRPDIQFAMCLCARFQASPRASHRQAVKRIMRYLNHTLEF 4835 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC R+ST G F G +LI+WS+RKQ++V++S++E+ Sbjct: 4836 GIWYSTSSSICLSGYSDADFGGCRIYRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTVESE 5015 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5016 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5108 Score = 68.4 bits (143), Expect(3) = 6e-56 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5106 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5285 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5286 NRFAFLRGELGII 5324 Score = 34.5 bits (69), Expect(3) = 6e-56 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ + CKP TP+ ST L Sbjct: 4548 QTKYTKDLLRRFKMDNCKPISTPIGSTAVL 4637 Score = 55.6 bits (115), Expect(2) = 1e-10 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5110 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSTVD*ATLDCFLEDHAINDVPRK*HV 4931 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V L P +S E L +E ++ P SV F YL IRL A Sbjct: 4930 PLVLFL*ILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 4790 Score = 31.3 bits (62), Expect(2) = 1e-10 Identities = 19/63 (30%), Positives = 32/63 (50%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K N + K+K +NVLC+ + + I V ++I+T E Sbjct: 5273 FSENISNLQLGVQKLQFNISFLNMIPQKVKTNINVLCA*VLNRILSNVNSTSIITKERYF 5094 Query: 1082 LRA 1090 L++ Sbjct: 5093 LKS 5085
>LOC_Os10g18440:12010.t01392:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3878 Score = 204 bits (441), Expect(2) = 7e-56 Identities = 85/137 (62%), Positives = 106/137 (77%) Frame = -3 / +2 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQ 1475 N L LSQEKY TDL+K + CKP TP+S +EKLSL +G + S D T+YR +VGALQ Sbjct: 3395 NGLILSQEKYVTDLLK*VNMDKCKPVSTPMSVSEKLSLHQGEVLASGDATRYRSIVGALQ 3574 Query: 1474 YLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFS 1295 YLTLTRPDISF+VNKVC +LHAPTTVH+ A KRI+RY++ T +GL +KSPS LV+ F+ Sbjct: 3575 YLTLTRPDISFSVNKVCQYLHAPTTVHWAAVKRILRYLQQTTKLGLKITKSPSFLVNGFT 3754 Query: 1294 NSDWAGCLDDRRSTGGF 1244 ++DWAGCL DRRS G+ Sbjct: 3755 DADWAGCLYDRRSICGW 3805 Score = 40.5 bits (82), Expect(2) = 7e-56 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = -3 / +3 Query: 934 SKDQVADGFTKALRTQSFEDFKHNLNLIKL 845 ++DQ ADGFTK+L + + F+HNLNL L Sbjct: 3783 TEDQFADGFTKSLTERQLKLFRHNLNLRSL 3872 Score = 134 bits (288), Expect = 1e-30 Identities = 68/132 (51%), Positives = 84/132 (63%) Frame = +3 / -3 Query: 1245 NPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN* 1424 +P ++ LS R PAQS K LT EGDL+ RP F VC+ YL I A +*TVVGAC+ Sbjct: 3804 HPQIDLLSYRQPAQSASVKPLTRNEGDLVILRPSFVVCWRYLRILFTAAQ*TVVGACRYW 3625 Query: 1425 HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESIGVPSMRDSFSVLDKGVGVGLQPCRPG 1604 HTLFT E+SGLV+V+Y APT LYLV S ++ P +D+FS D GV GL Sbjct: 3624 HTLFTENEMSGLVNVRYCSAPTILLYLVASPDARTSP*CKDNFSDTDIGVLTGLHLSILT 3445 Query: 1605 FFTKSVAYFS*E 1640 F+KSV YFS*+ Sbjct: 3444 HFSKSVTYFS*D 3409 Score = 76.7 bits (161), Expect = 4e-13 Identities = 48/128 (37%), Positives = 69/128 (53%) Frame = +2 / -2 Query: 1256 *TSVI*ASCPV*IRKSTHKCRRGLAEI*TNIQRMFHISYYTLGSCEVNCGWCM*KLTHLV 1435 *+SVI* +CP+ I ++ +K R + + T + + IS +L SC +NCG M* L HL+ Sbjct: 3793 *SSVI*TTCPICISETINKK*RRFSNLKT*LCCLLEISQDSLYSCPMNCGRSM*ILAHLI 3614 Query: 1436 YSKGDIRSCKCQILKSTYQTSVFSSVH*IYRCSFHER*FFCTR*RSGCGFTTL*ARLFYQ 1615 Y + D+RS +CQIL +Y TSV S+ S + *FF R T + F Sbjct: 3613 Y*E*DVRSGQCQIL*CSYYTSVPCSISRCKNFSLMQG*FF*Y*HRCAYRLTLIHINSFQ* 3434 Query: 1616 VCCIFFLR 1639 +C I LR Sbjct: 3433 ICHILLLR 3410 Score = 51.5 bits (106), Expect = 2e-05 Identities = 36/86 (41%), Positives = 44/86 (51%) Frame = -1 / +3 Query: 1641 FLKKNMQQTW*KSLAYKVVNPHPLLYLVQKNYLSWKEHL*IQWTLLNTDVW*VLFSI*HL 1462 +LK++M Q +* L + V+ L QKNY KE L T+V * +SI*H Sbjct: 3408 YLKRSM*QIY*NELIWISVSL*AHLCQYQKNYPCIKEKFLHLEMLQGTEV**EHYSI*H* 3587 Query: 1461 QDLISPLL*TRCVSFYMHQPQFTSQL 1384 DL S * RC S YM PQF QL Sbjct: 3588 PDLTSHSQ*IRCASIYMLLPQFIGQL 3665 Score = 48.3 bits (99), Expect = 2e-04 Identities = 26/70 (37%), Positives = 39/70 (55%) Frame = -2 / +1 Query: 1574 HSFI*YRKTISHGRNTYRFSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSS 1395 H+++ RK I R + Y +Q R ++V D +T*+L+ K GV V TC+ HSS Sbjct: 3475 HTYVSIRKIILASRRSSCIWRCYKVQKYSRSTTVSDIDQT*HLILSK*GVPVSTCSYHSS 3654 Query: 1394 LHSCQAYSKI 1365 L SC+ +I Sbjct: 3655 LGSCKENPEI 3684
>LOC_Os01g59220:12001.t05312:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7231 Score = 155 bits (333), Expect(3) = 9e-56 Identities = 65/151 (43%), Positives = 98/151 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 6542 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 6721 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 6722 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 6901 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++W+ S LK+ G+ K P F Sbjct: 6902 YVAAASCCL*ILWLLSTLKDYGLTFEKVPLF 6994 Score = 66.6 bits (139), Expect(3) = 9e-56 Identities = 28/73 (38%), Positives = 47/73 (64%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTK+I+I FHF+ + V + ++++F+ +K Q+AD FTK L + Sbjct: 6992 FCDNTSAINIAKNHVQHSRTKYIDIRFHFLRDYVEKRDVELQFLDTKLQIADIFTKPLDS 7171 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 7172 NRFAFLRGELGII 7210 Score = 35.4 bits (71), Expect(3) = 9e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 6434 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 6523 Score = 58.8 bits (122), Expect(3) = 1e-13 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 6996 QKRGTFSKVRP*SFKVDKSQRIYKQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 6817 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 6816 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 6676 Score = 32.2 bits (64), Expect(3) = 1e-13 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + N + K+K +NVLC+ M + I + ++I+T E Sbjct: 7159 FSENISNLQLCVQKLQFNISLFNIIPQKVKTNINVLCA*MLNMILSNIDSTSIITKE 6989 Score = 23.1 bits (44), Expect(3) = 1e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 6627 TANCMSGLEAVRYNKDPIILLYSF*STAS 6541
>LOC_Os06g30670:12006.t02770:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6205 Score = 155 bits (332), Expect(3) = 9e-56 Identities = 64/151 (42%), Positives = 97/151 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A RI+RY+ HTL Sbjct: 5516 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVNRIMRYLNHTLEF 5695 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI WS+RKQ++V++S+ E+ Sbjct: 5696 GIWYSTSSSICLSRYSDADFGGCKIDRKSTSGTCHFLGTSLIEWSSRKQSSVAQSTAESE 5875 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G K P F Sbjct: 5876 YVAAASCCSQILWLLSTLKDYGFTFDKVPLF 5968 Score = 67.0 bits (140), Expect(3) = 9e-56 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FT+ L + Sbjct: 5966 FCDNTSAINITKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTRPLDS 6145 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 6146 NRFAFLRGELGII 6184 Score = 35.4 bits (71), Expect(3) = 9e-56 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -3 / +2 Query: 1630 KYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 KYA DL+++ ++ CKP TP+ ST L Sbjct: 5414 KYAKDLLRRFKMENCKPISTPIGSTAVL 5497 Score = 61.6 bits (128), Expect(3) = 4e-14 Identities = 39/107 (36%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G L P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5970 QKRGTLSKVKP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHSINDVPRK*HV 5791 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5790 PLVLFLSILQPPKSASEYLLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5650 Score = 29.9 bits (59), Expect(3) = 4e-14 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = +2 / -1 Query: 914 ISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 ISNL + K + N + K+K +NVLC+ + + I V ++I+T E Sbjct: 6121 ISNLQLGVQKLQFNISLLNMIPQKVKANINVLCA*VLNRILSNVDSTSIITKE 5963 Score = 24.4 bits (47), Expect(3) = 4e-14 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +VKY + P LY ST S Sbjct: 5601 TANCMSGLEAVKYNKDPIILLYSF*STAS 5515
>LOC_Os11g31720:12011.t02769:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5689 Score = 154 bits (330), Expect(3) = 9e-56 Identities = 63/151 (41%), Positives = 99/151 (65%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT++RPDI F V F +P H A KRI+RY+ HTL Sbjct: 5000 EAVDQKEYRSMIGSLLYLTVSRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5179 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+S G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5180 GIWYSTSSSICLSGYSDADFGGCRIDRKSISGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5359 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5360 YVAAASYCSQILWLLSTLKDYGLTFEKIPLF 5452 Score = 68.0 bits (142), Expect(3) = 9e-56 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5450 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5629 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5630 NRFAFLRGELGVI 5668 Score = 35.4 bits (71), Expect(3) = 9e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4892 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4981 Score = 59.3 bits (123), Expect(3) = 2e-13 Identities = 37/107 (34%), Positives = 52/107 (48%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G+ P SF++D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5454 QKRGIFSKVRP*SFNVDKSQRICEQ*LAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5275 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P + LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5274 PLILFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5134 Score = 32.2 bits (64), Expect(3) = 2e-13 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA +F N S S F+T S K*K ISMCFV T +A LS ++ Sbjct: 5622 KGLVKISAICNFVSKNCNSTSPFST*SLKK*KRISMCFVREC*TGFLAMLIALVLSQKR 5446 Score = 22.1 bits (42), Expect(3) = 2e-13 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTESI 1526 T +SGL +V+Y + P LY ST S+ Sbjct: 5085 TTNCMSGLETVRYNKDPIILLYSF*STASL 4996
>LOC_Os09g15220:12009.t01312:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5685 Score = 155 bits (333), Expect(3) = 9e-56 Identities = 63/151 (41%), Positives = 100/151 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4996 EAIDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAIKRIMRYLNHTLEF 5175 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++++ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5176 GIWYSTSSSICLSGYSDANFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5355 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5356 YVAAASCCSQILWLLSTLKDYGLTFEKIPLF 5448 Score = 66.6 bits (139), Expect(3) = 9e-56 Identities = 29/73 (39%), Positives = 44/73 (60%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI I FHF+ + V ++++F+ K Q+AD FTK L + Sbjct: 5446 FCDNTSAINIAKNPVQHSRTKHINIRFHFLRDHVEKGDVELQFLDRKLQIADIFTKPLDS 5625 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5626 NRFAFLRGELEII 5664 Score = 35.4 bits (71), Expect(3) = 9e-56 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4888 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4977 Score = 57.4 bits (119), Expect(2) = 3e-11 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G+ P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5450 QKRGIFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5271 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P + E L +E ++ P SV F YL IRL A Sbjct: 5270 PLVLFLSILQPPKLASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLIA 5130 Score = 31.8 bits (63), Expect(2) = 3e-11 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5613 FSENISNLQLSVQKLQFNISLLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKERYF 5434 Query: 1082 LRA 1090 L++ Sbjct: 5433 LKS 5425
>LOC_Os02g31190:12002.t02812:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5954 Score = 154 bits (331), Expect(3) = 1e-55 Identities = 63/151 (41%), Positives = 98/151 (64%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P H A KRI+RY+ HTL Sbjct: 5265 EAVDQKEYRSMIGSLLYLTASRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5444 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S + ++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5445 GIWYSTSSSIYLSGYFDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5624 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5625 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5717 Score = 69.8 bits (146), Expect(3) = 1e-55 Identities = 29/73 (39%), Positives = 47/73 (64%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ NLV H+RTKHI+I FHF+ + V + ++++F+ +K Q+A+ FTK L + Sbjct: 5715 FCDNTSAINIAKNLVQHSRTKHIDIRFHFLRDHVKKRDVELQFLDTKLQIANIFTKPLDS 5894 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 5895 NRFAFLHGELGII 5933 Score = 32.7 bits (65), Expect(3) = 1e-55 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ T L Sbjct: 5157 QMKYTKDLLRRFKMENCKPISTPIGYTAML 5246 Score = 57.0 bits (118), Expect(3) = 1e-13 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5719 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5540 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S + L +E ++ P SV F YL IRL A Sbjct: 5539 PLVLFLSILQPPKSASKYPLKYIEDEVEYQIPNSSV*FKYLIIRLTA 5399 Score = 35.0 bits (70), Expect(3) = 1e-13 Identities = 25/59 (42%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V A +F N S SLF T S K*K ISMCFV TR +A LS ++ Sbjct: 5887 KGLVKILAICNFVSKNCNSTSLFLT*SLKK*KRISMCFVREC*TRFLAMLIALVLSQKR 5711 Score = 22.6 bits (43), Expect(3) = 1e-13 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 T ISGL +V+Y + P LY ST S Sbjct: 5350 TTNCISGLEAVRYNKDPIILLYSF*STAS 5264
>LOC_Os08g09510:12008.t00836:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5732 Score = 159 bits (341), Expect(3) = 1e-55 Identities = 65/151 (43%), Positives = 100/151 (66%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 5043 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5222 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5223 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5402 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5403 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5495 Score = 66.6 bits (139), Expect(3) = 1e-55 Identities = 29/73 (39%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5493 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5672 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 5673 NRFAFLHGELGVI 5711 Score = 31.3 bits (62), Expect(3) = 1e-55 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY L+++ ++ CKP TP+ ST L Sbjct: 4935 QTKYTKYLLRRFKMENCKPISTPIGSTAVL 5024 Score = 59.3 bits (123), Expect(3) = 2e-13 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5497 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5318 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5317 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5177 Score = 31.3 bits (62), Expect(3) = 2e-13 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5660 FSENISNLQLCVQKLQLNISFLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKE 5490 Score = 23.1 bits (44), Expect(3) = 2e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5128 TANCMSGLEAVRYNKDPIILLYSF*STAS 5042
>LOC_Os02g25040:12002.t02201:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5368 Score = 153 bits (329), Expect(3) = 1e-55 Identities = 64/151 (42%), Positives = 97/151 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4679 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCTRFQASPRASHRQAVKRIMRYLNHTLEF 4858 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G +S S S +S +S++D+ GC DR++T G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 4859 GFWYSTSSSICLSGYSDADFGGCRIDRKNTSGTCHFLGTSLIAWSSRKQSSVAQSTTESE 5038 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK G K P F Sbjct: 5039 YLAAASCCSQILWLLSTLKGYGFTFEKVPLF 5131 Score = 68.9 bits (144), Expect(3) = 1e-55 Identities = 29/71 (40%), Positives = 46/71 (64%) Frame = -3 / +2 Query: 1063 DNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQS 884 DN A ++ NLV H+RTKHI+I FHF+ + V + ++++F+ +K Q+AD FTK L + Sbjct: 5135 DNTSAINIAKNLVQHSRTKHIDIRFHFLRDHVEKRDVELQFLDTKLQIADIFTKPLDSNR 5314 Query: 883 FEDFKHNLNLI 851 F + L +I Sbjct: 5315 FAFLRGELGII 5347 Score = 34.5 bits (69), Expect(3) = 1e-55 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ + CKP TP+ ST L Sbjct: 4571 QTKYTKDLLRRFKMDNCKPISTPIGSTAVL 4660 Score = 57.4 bits (119), Expect(3) = 3e-13 Identities = 36/107 (33%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 +K+G P F +D + A+A Y S++D T+ CFL DH + P+ Sbjct: 5133 EKRGTFSKVKP*PFKVDKSQRICEQQLAAARYSDSVVD*ATLDCFLEDHAINDVPRK*HV 4954 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4953 PLVFFLSILQPPKSASEYPLKHIEDEVEYQNPNSSV*FKYLIIRLTA 4813 Score = 32.2 bits (64), Expect(3) = 3e-13 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA + N S S F+T S K*K ISMCFV TR +A LS ++ Sbjct: 5301 KGLVKISAICNLVSKNCNSTSRFST*SLKK*KRISMCFVREC*TRFLAILIALVLSEKR 5125 Score = 23.1 bits (44), Expect(3) = 3e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 4764 TANCMSGLEAVRYNKDPIILLYSF*STAS 4678
>LOC_Os07g35100:12007.t03185:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5931 Score = 150 bits (322), Expect(3) = 2e-55 Identities = 66/149 (44%), Positives = 97/149 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A K I RY+K TL Sbjct: 5011 EEVDQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKCIFRYIKSTLEY 5190 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + S + V AFS++D+AGC DR+ST F G +L+SWS+RKQ++V++S+ EA Sbjct: 5191 GIWYPCSSALSVRAFSDADFAGCKIDRKSTSSTCHFLGTSLVSWSSRKQSSVAQSTAEAE 5370 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 5371 YVAAASACSQVLWMISTLKDYGLSFSGVP 5457 Score = 67.5 bits (141), Expect(3) = 2e-55 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = -3 / +1 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ V H+RTKHIEI +HF+ + V + + F+ S++Q+AD FTK L Sbjct: 5464 CDNTSAINIAKIPVQHSRTKHIEIQYHFLRDNVEKGTIVLEFVESENQLADIFTKPLDRS 5643 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 5644 HFEFLRSELGVI 5679 Score = 38.6 bits (78), Expect(3) = 2e-55 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 K + + Q KY+ +L+KK + CKP TP+++T L Sbjct: 4882 KEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSL 4992 Score = 42.8 bits (87), Expect(2) = 2e-07 Identities = 29/81 (35%), Positives = 37/81 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 5465 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 5286 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 V S HPA+S EKA T Sbjct: 5285 LEVLLRSILHPAKSASEKART 5223 Score = 33.1 bits (66), Expect(2) = 2e-07 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVL 1009 FCK + LIF NK N +S K+ +YLNVL Sbjct: 5628 FCKNVCQLIFRFNKL*HNGTFLNIVSEKVVLYLNVL 5521
>LOC_Os01g46000:12001.t04052:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5705 Score = 152 bits (327), Expect(3) = 2e-55 Identities = 61/151 (40%), Positives = 98/151 (64%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI + V F +P H A KRI+RY+ HTL Sbjct: 5016 EAVDQKEYRSMIGSLLYLTASRPDIQYVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5195 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC+ DR++T G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5196 GIWYSTSSSICLSGYSDADFGGCIIDRKNTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5375 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ + ++W+ LK+ G+ K P F Sbjct: 5376 YVAAASCCSHILWLLFTLKDYGLTFEKVPLF 5468 Score = 68.4 bits (143), Expect(3) = 2e-55 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5466 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5645 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5646 NRFAFLRGELGII 5684 Score = 35.4 bits (71), Expect(3) = 2e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4908 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4997 Score = 56.5 bits (117), Expect(2) = 4e-11 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF ++ + A+A Y S +D T+ CFL DH + P+ Sbjct: 5470 QKRGTFSKVRP*SFKVNKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5291 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5290 PLVFFLSIIQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5150 Score = 32.2 bits (64), Expect(2) = 4e-11 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I V ++I+T E Sbjct: 5633 FSENISNLQLGVQKLQFNISLLNMIPQKVKTNINVLCA*VLNRILSNVNSTSIITKERYF 5454 Query: 1082 LRA 1090 L++ Sbjct: 5453 LKS 5445
>LOC_Os07g33570:12007.t03036:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2962 Score = 151 bits (325), Expect(3) = 2e-55 Identities = 59/108 (54%), Positives = 80/108 (74%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GALQYLT TRPDIS+AV ++C +H P H A KRI+RY + T++ GL+ Sbjct: 2504 DLTDYRSLAGALQYLTFTRPDISYAVQQICLHMHDPREPHLAALKRILRYTQGTIDHGLH 2683 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQAT 1190 F +S + + A+S++DWAGC D R+ST G+A+F G NLISWS+++QAT Sbjct: 2684 FQRSRTVDLVAYSDADWAGCPDTRKSTSGYAVFLGANLISWSSKRQAT 2827 Score = 55.6 bits (115), Expect(3) = 2e-55 Identities = 24/49 (48%), Positives = 32/49 (65%) Frame = -3 / +3 Query: 1210 SARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWC 1064 S ++Q TVSRSS EA Y+A+ANA AE W++ +L EL SK +C Sbjct: 2814 SDKRQNTVSRSSAEAEYRAVANAVAETCWLRQLLHELHTPPSKAMVVYC 2960 Score = 49.2 bits (101), Expect(3) = 2e-55 Identities = 17/42 (40%), Positives = 28/42 (66%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 L LSQ++Y D++ + G+ CKP TP+ + KLS ++G P+ Sbjct: 2375 LFLSQQQYILDVLARAGMSECKPCSTPVDTNAKLSAVDGAPV 2500 Score = 45.1 bits (92), Expect(2) = 2e-08 Identities = 24/52 (46%), Positives = 29/52 (55%) Frame = +3 / -2 Query: 1188 TVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRP 1343 +VAC L D E+RL P+N A P V+ L S PAQS E A S + K P Sbjct: 2829 SVACRLEDQEIRLAPRNTA*PEVDFLVSGQPAQSASE*ATKSTVRER*KCNP 2674 Score = 34.5 bits (69), Expect(2) = 2e-08 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = +3 / -2 Query: 1371 TIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHL 1499 +IRL A + G+C +TA +ISGLV V+Y AP R L Sbjct: 2646 SIRLRAARCGSRGSCM*RQICWTA*DISGLVKVRYCNAPARLL 2518 Score = 33.6 bits (67), Expect = 4.1 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = -2 / +1 Query: 1382 QAYSKICETYAEYWSKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC* 1203 QAY+ + + W F + C F* LGR+ R + + +C + W F+V Sbjct: 2635 QAYTSLHSGHHRSWIAFSALSNC*LGCLF*C*LGRLSRHEEVHLGLCRVSWCQPDFLVLQ 2814 Query: 1202 KTS 1194 TS Sbjct: 2815 ATS 2823
>LOC_Os08g26300:12008.t02396:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2436 Score = 153 bits (328), Expect(3) = 2e-55 Identities = 63/151 (41%), Positives = 98/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++ +L YLT +RPDI FAV F +P H A KRI+RY HT+ Sbjct: 1747 EAVDQKEYRSMIESLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYFNHTVEF 1926 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 1927 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVTQSTAESE 2106 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 2107 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 2199 Score = 68.0 bits (142), Expect(3) = 2e-55 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 2197 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 2376 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 2377 NRFAFLRGELGVI 2415 Score = 35.4 bits (71), Expect(3) = 2e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 1639 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 1728 Score = 54.7 bits (113), Expect(2) = 2e-10 Identities = 36/107 (33%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 2201 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*VTLDCFLEDHAINDVPRK*HV 2022 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P +V YL IRL A Sbjct: 2021 PLVLFLSILQPPKSASEYPLRHIEDEVEYQIPNSTV*LKYLIIRLTA 1881 Score = 31.8 bits (63), Expect(2) = 2e-10 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 2364 FSENISNLQLCVQKLQLNISFLNMIPQKVKTNINVLCA*VLNRILSNINSTSIITKERYF 2185 Query: 1082 LRA 1090 L++ Sbjct: 2184 LKS 2176
>LOC_Os04g12490:12004.t01073:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 739 Score = 139 bits (298), Expect(4) = 2e-55 Identities = 60/119 (50%), Positives = 80/119 (67%) Frame = -3 / -2 Query: 1321 PSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANA 1142 P ++ +S++DWA C D RRST G+ IF G NL+S S+++Q TVS SS EA Y+A+A+A Sbjct: 381 PVGSLTDYSDADWASCPDSRRSTSGYYIFLGDNLVS*SSKRQTTVSCSSAEAKYRAVAHA 202 Query: 1141 TAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVA 965 AE W+ +L+EL S +CDNV A Y++ N V H RTKHIEID FV E+VA Sbjct: 201 VAE*CWLHQLLQELHAPISTATVVFCDNVSAVYMTTNPVHHCRTKHIEIDILFVREKVA 25 Score = 49.2 bits (101), Expect(4) = 2e-55 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = -3 / -1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKV 1427 D T+YR L GALQYLTLTRP+I++ V +V Sbjct: 568 DPTEYRSLAGALQYLTLTRPEIAYVVQQV 482 Score = 48.3 bits (99), Expect(4) = 2e-55 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = -3 / -1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT P+ + KLS EG P+ Sbjct: 703 DGLFLSQRQYAIDLLQRAGMFECHPTANPVDARAKLSA*EGAPV 572 Score = 37.7 bits (76), Expect(4) = 2e-55 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -3 / -3 Query: 1420 FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTL 1310 F+H P H KRI+RY+K +L+ GL+ S L Sbjct: 479 FMHDPREPHLALVKRILRYIKGSLSAGLHIGTVRSVL 369 Score = 71.2 bits (149), Expect(2) = 2e-12 Identities = 48/111 (43%), Positives = 58/111 (52%) Frame = +3 / +2 Query: 966 ATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVA 1145 AT S TK SISMC V T L A TLS + +E+ NS+S + SA A Sbjct: 26 ATFSRTKRMSISMCLVRQW*TGLVVM*TALTLSQKTTVAVEMGACNSWSSWWSQHYSATA 205 Query: 1146 FASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELE 1298 A+A Y AS L+ ETV C L D + RL P+ + P VER S AQS E Sbjct: 206 *ATARYFASALEHETVVCRLED*DTRLSPRKM**PEVERRESGQLAQSASE 358 Score = 25.8 bits (50), Expect(2) = 2e-12 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +3 / +3 Query: 1449 ISGLVSVKY*RAPTRHLYLVVS 1514 ISG V V+Y AP R LY V S Sbjct: 504 ISGRVRVRYWSAPARLLYSVGS 569
>LOC_Os05g16370:12005.t01407:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 3917 Score = 182 bits (393), Expect(2) = 2e-55 Identities = 71/106 (66%), Positives = 89/106 (83%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T+YR +VGALQYLTLTRPD SFA+NKVC FLH+PT H+ A KRI+RYVK ++++GL Sbjct: 3582 DATRYRSIVGALQYLTLTRPDTSFAINKVCQFLHSPTMQHWMAVKRILRYVKSSVDLGLK 3761 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQ 1196 + S ST++SAFS++DWAG +DDRRSTGGFAIF G NL+SWSAR + Sbjct: 3762 LNSSSSTIISAFSDADWAGSVDDRRSTGGFAIFLGSNLVSWSARSR 3899 Score = 54.7 bits (113), Expect(2) = 2e-55 Identities = 22/42 (52%), Positives = 30/42 (71%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDS 1517 ++Q KYA DL+K+ G+ CKP TPLS+TEKLS G+ D+ Sbjct: 3462 VTQNKYALDLLKRAGMLDCKPVDTPLSTTEKLSAYTGSIQDA 3587 Score = 122 bits (261), Expect(2) = 2e-32 Identities = 58/100 (58%), Positives = 67/100 (67%) Frame = +3 / -2 Query: 1215 EMRLGPKNIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK 1394 E +L P+ IA PPV+ LSS PAQS EKAL VE +LL FRP + FTYL I A++ Sbjct: 3880 ETKLDPRKIAKPPVDLLSSTDPAQSASEKALIIVEDELLSFRPKSTEDFTYLKILFTAIQ 3701 Query: 1395 *TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 +VG CKN* TL AKE+SGLV VKY APT LYLV S Sbjct: 3700 CCIVGLCKN*QTLLIAKEVSGLVKVKYCSAPTMLLYLVAS 3581 Score = 38.2 bits (77), Expect(2) = 2e-32 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 / -2 Query: 1533 PSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAY 1628 P D+FSV+D GV GLQ P F +S AY Sbjct: 3571 PVYADNFSVVDNGVSTGLQSNIPALFNRSSAY 3476 Score = 47.3 bits (97), Expect(2) = 1e-05 Identities = 31/109 (28%), Positives = 52/109 (47%) Frame = -2 / +2 Query: 1520 FSGHY*IQMSGRCSSVFDTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYW 1341 +S Y +Q R +++F+ K *Y C G+ V T + +++L + +IC+ + + Sbjct: 3575 YSRCYQVQEHCRSTTIFNFDKA*YFFCY**GLSVLT*SYNATLDGSKENFEICKVFCRFG 3754 Query: 1340 SKFQQVPFYTCECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTS 1194 S+ FY + FF LG + *Q N W + W F+ C K S Sbjct: 3755 SEA**FIFYYYKRFFRC*LGWIS**QKINWWFRYLSWVQFGFLECTKQS 3901 Score = 22.6 bits (43), Expect(2) = 1e-05 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -2 / +2 Query: 1628 ICNRLGKKAWPTRL*THTHSFI*YRKTI 1545 IC R +K+W L* +S + RK + Sbjct: 3476 ICTRSVEKSWDVGL*ACGYSVVYNRKVV 3559
>LOC_Os09g19229:12009.t01657:unspliced-genomic nodulation receptor kinase precursor, putative, expressed| Length = 22879 Score = 158 bits (339), Expect(3) = 2e-55 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / -1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 5170 EAIDQKEYRSMIGSLLYLTASRPDIQFAVFLCACFQASPRASHRQAVKRIMRYLNHTLEF 4991 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +SN+D+ GC DR+ST G F +LI+WS+RKQ++V++S+ E+ Sbjct: 4990 GIWYSTSSSICLSGYSNADFGGCRIDRKSTSGTCHFLSTSLIAWSSRKQSSVAQSTAESE 4811 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 4810 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 4718 Score = 62.5 bits (130), Expect(3) = 2e-55 Identities = 27/75 (36%), Positives = 45/75 (60%) Frame = -3 / -1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN ++ N + H+ TKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 4720 FCDNTSVINIAKNPIQHSCTKHIDIRFHFLRDHVEKGDVELQFLDTKLQLADIFTKPLDS 4541 Query: 889 QSFEDFKHNLNLIKL 845 F + L +I L Sbjct: 4540 NRFAFLRGELGVIHL 4496 Score = 35.4 bits (71), Expect(3) = 2e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / -1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 5278 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 5189 Score = 37.3 bits (75), Expect(2) = 2e-05 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +3 / +3 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADH 1214 QK+G P SF +D + A+A Y S +D T+ CFL DH Sbjct: 4716 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDH 4862 Score = 32.2 bits (64), Expect(2) = 2e-05 Identities = 20/39 (51%), Positives = 23/39 (58%) Frame = +3 / +3 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA+ +F N S S F+T S K*K ISMCFV Sbjct: 4548 KGLVKISASCNFVSKNCNSTSPFST*SLRK*KRISMCFV 4664
>LOC_Os05g04350:12005.t00331:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4776 Score = 157 bits (337), Expect(3) = 2e-55 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4087 EAVDQKEYRSMIGFLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 4266 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ ++ Sbjct: 4267 GICYSTSSSICLSGYSDADFGGCRIDRKSTSGTCYFLGTSLIAWSSRKQSSVAQSTAKSE 4446 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 4447 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 4539 Score = 62.9 bits (131), Expect(3) = 2e-55 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I F+F+ + V ++++F+ +K Q+AD FTK L + Sbjct: 4537 FCDNTSAINIAKNPVQHSRTKHIDICFYFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 4716 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 4717 NRFAFLCGELGII 4755 Score = 35.9 bits (72), Expect(3) = 2e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 3979 QTKYTKDLLRRLKMKNCKPISTPIGSTAML 4068 Score = 55.6 bits (115), Expect(3) = 2e-12 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y +D T+ CFL DH + P+ Sbjct: 4541 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDLAVD*ATLDCFLEDHAINDVPRK*HV 4362 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4361 PLVLFLSILQPPKSASEYPLKHIEDEVE*QIPNSSV*FKYLIIRLTA 4221 Score = 31.8 bits (63), Expect(3) = 2e-12 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMCFV Sbjct: 4709 KGLVKISAICNFVSKNCNSTSPFST*SLKK*KQISMCFV 4593 Score = 23.1 bits (44), Expect(3) = 2e-12 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 4172 TANCMSGLEAVRYNKNPIILLYSF*STAS 4086
>LOC_Os09g15020:12009.t01292:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4713 Score = 148 bits (318), Expect(3) = 2e-55 Identities = 62/151 (41%), Positives = 95/151 (62%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FA F +P H A KRI+RY+ HT Sbjct: 4024 EAVDQKEYRSMIGSLLYLTASRPDIQFAACLCARFQASPRVSHRQAVKRIMRYLNHTFEF 4203 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS RKQ++V++S+ E+ Sbjct: 4204 GIWYSISSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSFRKQSSVAQSTAESE 4383 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ + ++W+ S LK+ G+ P F Sbjct: 4384 YVAAASCCSHIVWLLSTLKDYGLTFEIVPFF 4476 Score = 71.6 bits (150), Expect(3) = 2e-55 Identities = 30/74 (40%), Positives = 47/74 (63%) Frame = -3 / +1 Query: 1072 FWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALR 893 F+CDN A ++ N V H+RT HI+I FHF+ + V ++++F+ +K Q+AD FTK L Sbjct: 4471 FFCDNTSAINIAKNHVQHSRTTHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLD 4650 Query: 892 TQSFEDFKHNLNLI 851 + F F+ L +I Sbjct: 4651 SNQFTFFRGELGII 4692 Score = 35.9 bits (72), Expect(3) = 2e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 3916 QTKYTNDLLRRFKMENCKPISTPIGSTAVL 4005 Score = 59.3 bits (123), Expect(2) = 7e-10 Identities = 37/107 (34%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G + P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 4478 QKKGTISKVRP*SFKVDKSQTICEQQLAAATYSDSAVD*ATLDCFLKDHAINDVPRK*HV 4299 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P +V F YL IRL A Sbjct: 4298 PLVLFLSILQPPKSASEYPLKHIEDEIEYQIPNSNV*FKYLIIRLTA 4158 Score = 25.4 bits (49), Expect(2) = 7e-10 Identities = 18/39 (46%), Positives = 20/39 (51%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA + N S S F+T S K*K ISMC V Sbjct: 4646 KGLVKISAICNLVSKNCNSTSPFST*SLKK*KRISMCVV 4530
>LOC_Os11g22670:12011.t01937:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7348 Score = 153 bits (329), Expect(3) = 3e-55 Identities = 64/151 (42%), Positives = 97/151 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ H L Sbjct: 6659 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHILEF 6838 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G LI+WS+RKQ++V +S+ E+ Sbjct: 6839 GICYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGILLIAWSSRKQSSVPQSTAESE 7018 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+A+ + ++W+ S LK+ G+ K P F Sbjct: 7019 YVAVASCCSHILWLLSTLKDYGLNFKKVPLF 7111 Score = 65.7 bits (137), Expect(3) = 3e-55 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+ D FTK L + Sbjct: 7109 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQLTDIFTKPLDS 7288 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 7289 NRFAFLRGGLGII 7327 Score = 36.3 bits (73), Expect(3) = 3e-55 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 / +2 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 + + Q KY DL+++ ++ CKP TP+ ST L Sbjct: 6539 IFVHQTKYTKDLLRRFKMENCKPISTPIGSTAML 6640 Score = 60.2 bits (125), Expect(3) = 1e-13 Identities = 38/107 (35%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D +H A+A Y S +D T+ CFL DH + P+ Sbjct: 7113 QKRGTFLKLRP*SFKVDKSHRICEQQLATATYSDSAVD*GTLDCFLEDHAINNIPRK*HV 6934 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P S+ F YL IRL A Sbjct: 6933 PLVLFLSILQPPKSASEYPLKHIEDEVE*QIPNSSI*FKYLIIRLTA 6793 Score = 31.3 bits (62), Expect(3) = 1e-13 Identities = 24/65 (36%), Positives = 32/65 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQ 1076 K V S + +F N S S F+T S K*K IS+CFV T +A LS ++ Sbjct: 7281 KGLVKISVSCNFVSKNCNSTSPFST*SLKK*KRISICFVREC*TGFLAMLIALVLSQKRG 7102 Query: 1077 GVLEL 1091 L+L Sbjct: 7101 TFLKL 7087 Score = 23.1 bits (44), Expect(3) = 1e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 6744 TANCMSGLEAVRYNKDPIILLYSF*STAS 6658
>LOC_Os03g29560:12003.t02576:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7103 Score = 154 bits (331), Expect(3) = 3e-55 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 6414 EAVD*KEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 6593 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ C DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 6594 GIWYSTSSSICLSGYSDADFGSCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 6773 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 6774 YVAAASCYSQILWLLSTLKDYGLTFEKVPLF 6866 Score = 65.7 bits (137), Expect(3) = 3e-55 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD F+K L + Sbjct: 6864 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFSKPLDS 7043 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 7044 NRFAFLSGELGII 7082 Score = 35.4 bits (71), Expect(3) = 3e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 6306 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 6395 Score = 51.5 bits (106), Expect(3) = 2e-10 Identities = 36/107 (33%), Positives = 48/107 (44%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 6868 QNRGTFSKVRP*SFKVDKSQRICE*QLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 6689 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS +S E L +E ++ P SV F YL IRL A Sbjct: 6688 PLVLFLSILQLPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 6548 Score = 28.6 bits (56), Expect(3) = 2e-10 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K N + K+K +NVLC+ + + I + ++I+T + Sbjct: 7031 FRENISNLQLCIQKLQFNISFLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKQRYF 6852 Query: 1082 LRA 1090 L++ Sbjct: 6851 LKS 6843 Score = 23.1 bits (44), Expect(3) = 2e-10 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 6499 TANCMSGLEAVRYNKDPIILLYSF*STAS 6413
>LOC_Os09g10030:12009.t00795:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5692 Score = 156 bits (335), Expect(3) = 4e-55 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 5003 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5182 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+ KQ++V++S+ E+ Sbjct: 5183 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSSKQSSVAQSTAESE 5362 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5363 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5455 Score = 67.5 bits (141), Expect(3) = 4e-55 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N + H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5453 FCDNTSAINIAKNPIQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5632 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5633 NRFAFLRGELGVI 5671 Score = 31.3 bits (62), Expect(3) = 4e-55 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSST 1556 Q KY DL+++ ++ CK TP+ ST Sbjct: 4895 QTKYTKDLLRRFKMENCKQISTPIGST 4975 Score = 56.5 bits (117), Expect(3) = 7e-12 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ C L DH + P+ Sbjct: 5457 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCLLEDHAINDVPRK*HV 5278 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5277 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5137 Score = 28.6 bits (56), Expect(3) = 7e-12 Identities = 19/39 (48%), Positives = 21/39 (53%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMC V Sbjct: 5625 KGLVKISAICNFVSKNCNSTSPFST*SLKK*KRISMCLV 5509 Score = 23.1 bits (44), Expect(3) = 7e-12 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5088 TANCMSGLEAVRYNKDPIILLYSF*STAS 5002
>LOC_Os12g35880:12012.t03276:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5633 Score = 155 bits (333), Expect(3) = 4e-55 Identities = 65/149 (43%), Positives = 96/149 (64%) Frame = -3 / +3 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 VD +YR ++G+L YLT +RPDI FAV F +P T H A KRI+RY+ HTL + Sbjct: 4950 VDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRTSHRQAVKRIMRYLNHTLEFRI 5129 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 +S S S +S +S++D+ GC DR+ST G F G +LI WS+RKQ++V +S+ E+ Y Sbjct: 5130 WYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIGWSSRKQSSVGQSTAESEYV 5309 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCF 1070 A A+ ++++W+ S LK+ G+ K P F Sbjct: 5310 AAASCCSQILWLLSTLKDYGLTFEKVPLF 5396 Score = 63.8 bits (133), Expect(3) = 4e-55 Identities = 27/73 (36%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V ++RTKHI+I FHF+ + V ++++F+ +K Q+AD FT+ L + Sbjct: 5394 FCDNTSAINIAKNPVQYSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTEPLDS 5573 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5574 NRFAFLRGELGII 5612 Score = 35.9 bits (72), Expect(3) = 4e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4836 QTKYTKDLLRRLKMENCKPISTPIGSTAVL 4925 Score = 46.9 bits (96), Expect(3) = 3e-09 Identities = 28/87 (32%), Positives = 40/87 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5398 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*PTLDCFLEDHPINDVPRK*HV 5219 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDL 1328 P V LS P +S E L +E ++ Sbjct: 5218 PLVLFLSILQPPKSASEYPLKHIEDEV 5138 Score = 29.0 bits (57), Expect(3) = 3e-09 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +2 / -1 Query: 914 ISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGSLRA 1090 ISNL + K N + K+K +NVLC+ + + I + ++I+T E L++ Sbjct: 5549 ISNLQLGVQKLQFNISFLNMIPQKVKTNINVLCA*VLNRILSNINSTSIITKERYFLKS 5373 Score = 23.1 bits (44), Expect(3) = 3e-09 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5029 TANCMSGLEAVRYNKDPIILLYSF*STTS 4943
>LOC_Os07g05280:12007.t00411:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3963 Score = 196 bits (422), Expect(2) = 6e-55 Identities = 79/185 (42%), Positives = 121/185 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 D D T YR LVG+L YLT TRPDI FA + + ++ +P+ ++FTAAKR++RY+K T + Sbjct: 3400 DKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADY 3579 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + + + +++SDWAGCLDD +ST G+A G + SWS +KQ V+ SS EA Sbjct: 3580 GIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAFSLGSGMCSWSTKKQNIVALSSAEAE 3759 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHF 983 Y A + A ++V+W++ ++++LG K + +CD+ A +S N V H RTKHI I +H+ Sbjct: 3760 YVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHY 3939 Query: 982 V*ERV 968 + E V Sbjct: 3940 IREAV 3954 Score = 40.0 bits (81), Expect(2) = 6e-55 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = -3 / +1 Query: 1648 LHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 + +SQ KYA +++KK + CK TPL S EK +G Sbjct: 3280 IFISQRKYAENILKKFKMDNCKSVTTPLLSNEKQKARDG 3396 Score = 51.9 bits (107), Expect(3) = 4e-07 Identities = 28/66 (42%), Positives = 32/66 (48%) Frame = +3 / -2 Query: 1092 FIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSS 1271 F P S + T AF +A Y AS D T+ CF D E P A P V +SS Sbjct: 3830 FSPRSSIILLNQTTCETAFDAATYSASAEDKATIFCFFVDQEHIPEPSEKA*PDVLFISS 3651 Query: 1272 RHPAQS 1289 RHPAQS Sbjct: 3650 RHPAQS 3633 Score = 25.8 bits (50), Expect(3) = 4e-07 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 / -2 Query: 1440 AKEISGLVSVKY*RAPTRHLYLVVSTES 1523 A ISG V+VKY + PT+ L +V S S Sbjct: 3482 ANIISGRVAVKYNKLPTKLL*IVGSALS 3399 Score = 24.9 bits (48), Expect(3) = 4e-07 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 / -2 Query: 1521 SIGVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYF 1631 ++ PS+ FS +KGV LQ FF AYF Sbjct: 3407 ALSAPSLAFCFSFDNKGVVTDLQLSILNFFRIFSAYF 3297
>LOC_Os12g26560:12012.t02369:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5277 Score = 154 bits (330), Expect(3) = 6e-55 Identities = 64/151 (42%), Positives = 98/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4588 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRVSHRQAVKRIMRYLNHTLEF 4767 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 4768 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGAYHFLGISLIAWSSRKQSSVAQSTAESE 4947 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+ ++++W S LK+ G+ K P F Sbjct: 4948 YVVAASCCSQILWFLSTLKDYGLTFEKIPLF 5040 Score = 68.0 bits (142), Expect(3) = 6e-55 Identities = 29/73 (39%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V +++F+ +K Q+AD FTK L + Sbjct: 5038 FCDNTSAINIAKNPVQHSRTKHIDICFHFLRDHVEKGEFELQFLDTKLQIADIFTKPLDS 5217 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5218 NRFAFLRGELGII 5256 Score = 32.7 bits (65), Expect(3) = 6e-55 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLS 1562 Q KY DL+++ ++ CKP TP+S Sbjct: 4506 QTKYTKDLLRRFKMENCKPISTPIS 4580 Score = 58.3 bits (121), Expect(3) = 2e-13 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G+ P SF +D A+ Y S +D T+ CFL DH + P+ Sbjct: 5042 QKRGIFSKVRP*SFKVDKNQRICEQQLAATTYSDSAVD*ATLDCFLEDHAINDIPRK*YA 4863 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4862 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 4722 Score = 32.2 bits (64), Expect(3) = 2e-13 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMCFV Sbjct: 5210 KGLVKISAICNFVSKNCNSNSPFST*SLKK*KQISMCFV 5094 Score = 23.1 bits (44), Expect(3) = 2e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 4673 TANCMSGLEAVRYNKDPIILLYSF*STAS 4587
>LOC_Os11g47260:12011.t04201:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2310 Score = 153 bits (328), Expect(3) = 6e-55 Identities = 64/150 (42%), Positives = 98/150 (65%) Frame = -3 / +1 Query: 1519 SVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIG 1340 +VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL G Sbjct: 1624 AVDQKEYRSMIGSLLYLTASRPDIQFAVCLRARFQASPRASHRQAVKRIMRYLNHTLEFG 1803 Query: 1339 LNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGY 1160 + +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Y Sbjct: 1804 IWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEY 1983 Query: 1159 KALANATAEVIWVQSMLKELGIKSSKTPCF 1070 A A+ ++++W+ S LK+ G+ K F Sbjct: 1984 VAAASCCSQILWLLSTLKDYGLTFEKVHLF 2073 Score = 66.1 bits (138), Expect(3) = 6e-55 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ + Q+AD FTK L + Sbjct: 2071 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTNLQIADIFTKPLDS 2250 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 2251 NRFAFLRGELGII 2289 Score = 35.4 bits (71), Expect(3) = 6e-55 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 1513 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 1602 Score = 55.1 bits (114), Expect(2) = 2e-10 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+ P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 2075 QKRCTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 1896 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 1895 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 1755 Score = 31.3 bits (62), Expect(2) = 2e-10 Identities = 24/59 (40%), Positives = 28/59 (47%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA F N S S F+T S K*K ISMCFV T +A LS ++ Sbjct: 2243 KGLVKISAICKFVSKNCNSTSPFST*SLKK*KRISMCFVRECCTGFLAILIALVLSQKR 2067
>LOC_Os10g02120:12010.t00107:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5879 Score = 153 bits (328), Expect(3) = 8e-55 Identities = 64/151 (42%), Positives = 98/151 (64%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RP I FAV F +P H A KRI+RY+ HTL Sbjct: 5190 EAVDQKEYRSMIGSLLYLTASRPGIQFAVCLCVRFQASPRASHRQAVKRIMRYLNHTLEF 5369 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5370 GIWYSTSSSICLSGYSDADFRGCRIDRKSTSGTCHFLGKSLIAWSSRKQSSVAQSTAESE 5549 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK G+ K P F Sbjct: 5550 YVAAASCCSQILWLLSTLKYYGLTFEKVPLF 5642 Score = 66.1 bits (138), Expect(3) = 8e-55 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ NLV H+RTKH +I FHF+ + V ++++F+ +K Q+A+ FTK L + Sbjct: 5640 FCDNTSAINIAKNLVQHSRTKHNDIRFHFLRDHVEKGDVELQFLDTKLQIANIFTKPLDS 5819 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5820 NRFAFLRGELGII 5858 Score = 35.0 bits (70), Expect(3) = 8e-55 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSST 1556 Q KY DL+++ ++ CKP TP+ ST Sbjct: 5082 QTKYTKDLLRRFKMENCKPISTPIGST 5162 Score = 56.1 bits (116), Expect(2) = 2e-10 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P F +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5644 QKRGTFSKVRP*YFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDLPRK*HV 5465 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5464 PLVLFLSILQPRKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5324 Score = 30.4 bits (60), Expect(2) = 2e-10 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V A +F N S S F+T S K*K IS+CFV TR +A LS ++ Sbjct: 5812 KGLVKILAICNFVSKNCNSTSPFST*SLKK*KRISLCFVREC*TRFLAILIALVLSQKR 5636
>LOC_Os04g09760:12004.t00810:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6624 Score = 149 bits (321), Expect(3) = 1e-54 Identities = 61/151 (40%), Positives = 97/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT +RPDI FAV F +P H KRI+RY+ HTL Sbjct: 5935 EAIDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRGSHRQTVKRIMRYLNHTLEF 6114 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S + ++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 6115 GIWYSTSSSICLSGYFDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 6294 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ + K P F Sbjct: 6295 YVAAASCCSQILWLLSTLKDYDLTFEKVPLF 6387 Score = 68.4 bits (143), Expect(3) = 1e-54 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 6385 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 6564 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 6565 NRFAFLRGELGII 6603 Score = 35.4 bits (71), Expect(3) = 1e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 5827 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 5916 Score = 51.9 bits (107), Expect(2) = 4e-10 Identities = 35/105 (33%), Positives = 48/105 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 6389 QKRGTFSKVRS*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 6210 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRL 1382 P V LS P +S + L +E ++ P SV F YL IRL Sbjct: 6209 PLVLFLSILQPPKSASKYPLKHIEDEVEYQIPNSSV*FKYLIIRL 6075 Score = 33.6 bits (67), Expect(2) = 4e-10 Identities = 19/63 (30%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + KMK +NVLC+ + + I + ++I+T E Sbjct: 6552 FSENISNLQLCVQKLQFNISLLNMIPQKMKANINVLCA*VLNRILSNIDSTSIITKERYF 6373 Query: 1082 LRA 1090 L++ Sbjct: 6372 LKS 6364
>LOC_Os03g19104:12003.t01677:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 7459 Score = 155 bits (334), Expect(3) = 2e-54 Identities = 63/151 (41%), Positives = 97/151 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P H KRI+RY+ HTL Sbjct: 6770 EAVDEKEYRSMIGSLLYLTASRPDIQFVVCLCARFQASPCASHRQVVKRIIRYLNHTLGF 6949 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +SN+D+ GC D +ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 6950 GIWYSTSSSVCLSGYSNADFGGCRIDMKSTSGTCHFLGTSLIAWSSRKQSSVAQSTSESE 7129 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 7130 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 7222 Score = 63.8 bits (133), Expect(3) = 2e-54 Identities = 27/73 (36%), Positives = 45/73 (61%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++ + +K ++AD FTK L + Sbjct: 7220 FCDNTSAINIAKNHVQHSRTKHIDIRFHFLRDHVEKGDVELQLLDTKLRIADIFTKPLDS 7399 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 7400 NRFAFLRGELGII 7438 Score = 33.1 bits (66), Expect(3) = 2e-54 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSST 1556 Q KY DL++ ++ CKP TP+ ST Sbjct: 6662 QTKYTKDLLRGFKIENCKPISTPIGST 6742 Score = 56.1 bits (116), Expect(3) = 1e-11 Identities = 37/105 (35%), Positives = 49/105 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 7224 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSEVD*ATLDCFLDDHAINDVPRK*HV 7045 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRL 1382 P V +S P +S LE L E ++ P SV F YL IRL Sbjct: 7044 PLVLFISILQPPKSALEYPLKHTEDEVEYQIPNPSV*FKYLIIRL 6910 Score = 29.0 bits (57), Expect(3) = 1e-11 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F + S S F+T S K*K ISMCFV Sbjct: 7392 KGLVKISAIRNFVSKSCNSTSPFST*SLKK*KRISMCFV 7276 Score = 22.1 bits (42), Expect(3) = 1e-11 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 T +SGL +V+Y + P LY ST S Sbjct: 6855 TTNCMSGLEAVRYNKDPIILLYSFSSTAS 6769
>LOC_Os12g26400:12012.t02354:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5614 Score = 153 bits (328), Expect(3) = 2e-54 Identities = 63/152 (41%), Positives = 98/152 (64%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4925 EAVDQKVYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5104 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ + S S +S +S++D+ GC DR+S G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5105 GI*YFTSSSICLSGYSDADFGGCRIDRKSISGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5284 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCFW 1067 Y A A+ ++++W+ S LK+ G+ K P F+ Sbjct: 5285 YVAAASCCSQILWLLSTLKDYGLTFEKVPLFY 5380 Score = 63.4 bits (132), Expect(3) = 2e-54 Identities = 28/71 (39%), Positives = 44/71 (61%) Frame = -3 / +2 Query: 1063 DNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQS 884 DN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5381 DNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNR 5560 Query: 883 FEDFKHNLNLI 851 F + L +I Sbjct: 5561 FAFLRGELGVI 5593 Score = 36.3 bits (73), Expect(3) = 2e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4817 QTKYTKDLLRRFNMENCKPISTPIGSTAVL 4906 Score = 56.5 bits (117), Expect(3) = 9e-13 Identities = 36/106 (33%), Positives = 49/106 (46%) Frame = +3 / -2 Query: 1071 KQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANP 1250 K+G P SF +D + A+A Y S +D T+ CFL DH + P+ P Sbjct: 5376 KRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HVP 5197 Query: 1251 PVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 + LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5196 LILFLSILQPPKSASEYPLKHIEDEVKY*IPNSSV*FKYLIIRLTA 5059 Score = 31.3 bits (62), Expect(3) = 9e-13 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMCFV Sbjct: 5547 KGLVKISAICNFVSKNCNSTSPFST*SLKK*KRISMCFV 5431 Score = 23.5 bits (45), Expect(3) = 9e-13 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5010 TANCMSGLEAVRYNKDPIILLYTF*STAS 4924
>LOC_Os06g10550:12006.t00933:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3179 Score = 155 bits (334), Expect(3) = 2e-54 Identities = 64/151 (42%), Positives = 99/151 (65%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 2490 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHCQAVKRIMRYLNHTLEF 2669 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 + +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 2670 RIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 2849 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 2850 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 2942 Score = 62.5 bits (130), Expect(3) = 2e-54 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I F F+ + V ++++F+ +K Q+AD FTK L Sbjct: 2940 FCDNTSAINIAKNPVQHSRTKHIDIRFRFLRDHVEKGDVELQFLDTKLQLADIFTKPLDF 3119 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 3120 NRFAFLRGELGII 3158 Score = 34.5 bits (69), Expect(3) = 2e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 2382 QTKYTKDLLRRFKMENCKPILTPIGSTAVL 2471 Score = 46.9 bits (96), Expect(3) = 9e-10 Identities = 28/87 (32%), Positives = 40/87 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 2944 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 2765 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDL 1328 P V LS P +S E L +E ++ Sbjct: 2764 PLVLFLSILQPPKSASEYPLKHIEDEV 2684 Score = 30.9 bits (61), Expect(3) = 9e-10 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA+ +F N S S F+T S K K ISMCFV T +A LS ++ Sbjct: 3112 KGLVKISASCNFVSKNCNSTSPFST*SLKKRKRISMCFVREC*TGFLAMLIALVLSQKR 2936 Score = 23.1 bits (44), Expect(3) = 9e-10 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 2575 TANCMSGLEAVRYNKDPIILLYSF*STAS 2489
>LOC_Os01g31180:12001.t02702:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1820 Score = 170 bits (366), Expect(2) = 3e-54 Identities = 75/194 (38%), Positives = 115/194 (59%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGAL 1478 K+ +SQ KY DL+K+ GL+ KP TP+++ L L E VD YR ++G+L Sbjct: 996 KDGTFMSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDEEEGGKPVDLKLYRSMIGSL 1175 Query: 1477 QYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAF 1298 YLT +RPDI F+V F AP H A KRI+ Y+KH+ IGL K + + Sbjct: 1176 LYLTASRPDIMFSVYMCARFQAAPNECHLVAMKRILTYLKHSSTIGLW*QKGTKFKLVGY 1355 Query: 1297 SNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQ 1118 S+SD+AGC DR+ST G G +++SWS++KQ +V+ S+ + Y ++ + A+++W++ Sbjct: 1356 SDSDYAGCKVDRKSTSGSCQILGRSIVSWSSKKQNSVALSTADVEYVSMGSCCAQLLWMK 1535 Query: 1117 SMLKELGIKSSKTP 1076 L + GI +KTP Sbjct: 1536 QTLLDYGISFTKTP 1577 Score = 63.4 bits (132), Expect(2) = 3e-54 Identities = 30/72 (41%), Positives = 44/72 (61%) Frame = -3 / +3 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V ++RTKHI+I HF+ + VA + I I ++DQ+AD FTK L Sbjct: 1584 CDNDSAIKIANNPVQYSRTKHIDIRHHFLRDHVAKSDIVISHIRTEDQLADIFTKPLDET 1763 Query: 886 SFEDFKHNLNLI 851 F ++ LN+I Sbjct: 1764 HFCKLRNELNVI 1799 Score = 32.7 bits (65), Expect(3) = 4e-08 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +3 / -2 Query: 1338 RPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVK 1472 +PI CF Y+ I A K* +GA N + T ISGL +V+ Sbjct: 1315 KPIVEECFKYVRILFMATK*HSLGAA*NRAHM*TLNMISGLDAVR 1181 Score = 32.2 bits (64), Expect(3) = 4e-08 Identities = 23/58 (39%), Positives = 33/58 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQ 1070 + V SA+*S + M+ SL AT S K* +S+C VL T L ++A +LSH+ Sbjct: 1753 RGLVKMSAS*SSVLMWLMTMSLLAT*SLRK*WRMSICLVLEYWTGLLAIFMALSLSHR 1580 Score = 30.4 bits (60), Expect(3) = 4e-08 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +3 / -2 Query: 1161 YPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELE 1298 Y S ++ T CFL DH+ P P V LS+ PA SE E Sbjct: 1492 YSTSAVERATEFCFLDDHDTMDLPSIWQLPDVLFLSTLQPA*SESE 1355
>LOC_Os08g28500:12008.t02607:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5661 Score = 151 bits (325), Expect(3) = 3e-54 Identities = 61/151 (40%), Positives = 98/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L +LT +RPDI F V F + +H KRI+RY+ HTL Sbjct: 4972 EAVDQKEYRSMIGSLLFLTASRPDIQFVVCLCARFQASRPDIHRQVVKRIMRYLNHTLEF 5151 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5152 GIWYSTSSSICLSRYSDADFGGCRIDRKSTSGICHFLGTSLIAWSSRKQSSVAQSTTESE 5331 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 5332 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 5424 Score = 65.2 bits (136), Expect(3) = 3e-54 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V + ++++F+ +K Q+AD F K L Sbjct: 5422 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKRDVELQFLDTKLQIADIFHKPLDH 5601 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5602 NRFAFLRCELGII 5640 Score = 35.4 bits (71), Expect(3) = 3e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4864 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4953 Score = 58.3 bits (121), Expect(2) = 2e-11 Identities = 37/105 (35%), Positives = 50/105 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S++D T+ CFL DH + P+ Sbjct: 5426 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSVVD*ATLDCFLEDHAINDVPRK*HI 5247 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRL 1382 P V LS P +S E L +E ++ P SV F YL IRL Sbjct: 5246 PLVLFLSILQPPKSASEYLLKHIEDEVEYQIPNSSV*FKYLIIRL 5112 Score = 31.8 bits (63), Expect(2) = 2e-11 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5589 FMENISNLQLGIQKLQFNISLLNMIPQKVKTNINVLCT*VLNRILSNIDSTSIITKERYF 5410 Query: 1082 LRA 1090 L++ Sbjct: 5409 LKS 5401
>LOC_Os08g13590:12008.t01236:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5251 Score = 155 bits (333), Expect(3) = 3e-54 Identities = 62/151 (41%), Positives = 100/151 (66%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT +RPDI FAV + +P H A KRI+RY+ HTL Sbjct: 4562 EAIDQKEYRSMIGSLLYLTASRPDIQFAVCLCARYQASPRASHRQAVKRIMRYLNHTLEF 4741 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ T G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 4742 GIWYSTSSSICLSGYSDADFGGCRIDRKITSGTCHFLGTSLIAWSSRKQSSVAQSTTESE 4921 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+A+ ++++W+ S LK+ G+ K P F Sbjct: 4922 YVAVASCCSQILWLLSTLKDYGLTFEKVPLF 5014 Score = 62.5 bits (130), Expect(3) = 3e-54 Identities = 27/72 (37%), Positives = 44/72 (61%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V +RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5012 FCDNTSAINIAKNPVQQSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5191 Query: 889 QSFEDFKHNLNL 854 F + L + Sbjct: 5192 NLFAFLRGELGI 5227 Score = 34.5 bits (69), Expect(3) = 3e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4454 QTKYMKDLLRQFKMENCKPISTPIGSTTVL 4543 Score = 60.2 bits (125), Expect(2) = 3e-12 Identities = 38/107 (35%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S++D T+ CFL DH + P+ Sbjct: 5016 QKRGTFSKVRP*SFKVDKSQRICEQQLATATYSDSVVD*ATLDCFLEDHAINDVPRK*HV 4837 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4836 PLVIFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 4696 Score = 32.2 bits (64), Expect(2) = 3e-12 Identities = 18/63 (28%), Positives = 33/63 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5179 FSENISNLQLCVQKLQFNISLLNMIPQKVKTNINVLCA*LLNRILSNIDSTSIITKERYF 5000 Query: 1082 LRA 1090 L++ Sbjct: 4999 LKS 4991
>LOC_Os11g20470:12011.t01816:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5699 Score = 150 bits (323), Expect(3) = 5e-54 Identities = 62/151 (41%), Positives = 96/151 (63%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +Y ++G+L YLT +RPDI FAV F + H KRI+RY+ HTL Sbjct: 5010 EAIDQKEYGSMIGSLLYLTASRPDIQFAVCLCARFQASSRASHRQVVKRIMRYLNHTLEF 5189 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S+ D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5190 GIWYSTSSSICLSGYSDVDFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5369 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A AN ++++W+ S LK+ G+ K P F Sbjct: 5370 YVAAANCCSQILWLLSTLKDYGLTFEKVPLF 5462 Score = 67.5 bits (141), Expect(3) = 5e-54 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V + ++++F+ +K Q+AD FTK L + Sbjct: 5460 FCDNTSAINIAKNPVQHSRTKHIDICFHFLRDHVEKRDVELQFLDTKLQLADIFTKPLDS 5639 Query: 889 QSFEDFKHNLNLI 851 F L +I Sbjct: 5640 NRFAFLHGELGII 5678 Score = 33.1 bits (66), Expect(3) = 5e-54 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL++ ++ CKP TP+ ST L Sbjct: 4902 QTKYTKDLLRWFKMENCKPISTPIGSTAVL 4991 Score = 57.4 bits (119), Expect(2) = 2e-12 Identities = 37/105 (35%), Positives = 49/105 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5464 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 5285 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRL 1382 P V LS P +S E L +E ++ P SV F YL IRL Sbjct: 5284 PLVLFLSILQPPKSTSEYPLKHIEDEVEYQIPNSSV*FKYLIIRL 5150 Score = 35.9 bits (72), Expect(2) = 2e-12 Identities = 21/39 (53%), Positives = 24/39 (61%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA+ +F N S SLF+T S K*K ISMCFV Sbjct: 5632 KGLVKISASCNFVSKNCNSTSLFST*SLKK*KQISMCFV 5516
>LOC_Os08g29840:12008.t02737:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4244 Score = 152 bits (327), Expect(3) = 5e-54 Identities = 64/151 (42%), Positives = 98/151 (64%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 3555 EAVDQKEYRSMIGSLLYLTTSRPDIPFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 3734 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 3735 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGICYFLGISLIAWSSRKQSSVAQSTAESE 3914 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ + ++W+ S LK+ G+ K F Sbjct: 3915 YIAAASCCS*ILWLLSTLKDYGLTFEKVSLF 4007 Score = 63.8 bits (133), Expect(3) = 5e-54 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I F F+ + V ++++F+ +K Q+AD FTK L + Sbjct: 4005 FCDNTSAINIAKNPVQHSRTKHIDIRFQFLRDHVKKGDVELQFLDTKLQLADIFTKLLDS 4184 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 4185 NRFAFLRGELGII 4223 Score = 35.0 bits (70), Expect(3) = 5e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 3447 QTKYTKDLLRRFKMENCKPILTPIGSTAML 3536 Score = 55.1 bits (114), Expect(3) = 5e-11 Identities = 36/107 (33%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+ P SF +D + A+A+Y S +D T+ CFL DH + P+ Sbjct: 4009 QKRDTFSKVRP*SFKVDKSQRIYEQQLAAAIYSDSAVD*ATLDCFLEDHAINDIPRK*HI 3830 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L ++ ++ P SV F YL IRL A Sbjct: 3829 PLVLFLSILQPPKSASEYPLKHIDDEVEYQIPNSSV*FKYLIIRLTA 3689 Score = 27.6 bits (54), Expect(3) = 5e-11 Identities = 22/59 (37%), Positives = 28/59 (47%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K+ V SA+ + N S S F T S *K ISMCFV T +A LS ++ Sbjct: 4177 KSLVKISASCNLVSKNCNSTSPFLT*SLKN*KRISMCFVREC*TGFLAMLIALVLSQKR 4001 Score = 22.6 bits (43), Expect(3) = 5e-11 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL V+Y + P LY ST S Sbjct: 3640 TANGMSGLEVVRYNKDPIILLYSF*STAS 3554
>LOC_Os11g46806:12011.t04155:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1020 Score = 149 bits (321), Expect(3) = 5e-54 Identities = 62/151 (41%), Positives = 98/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 331 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 510 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 + +S S S +S +S++D+ C DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 511 EIWYSTSSSIYLSGYSDADFGSCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 690 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S+LK+ G+ K F Sbjct: 691 YVAAASCCSQILWLLSILKDYGLTFEKVSLF 783 Score = 66.1 bits (138), Expect(3) = 5e-54 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 781 FCDNTSGINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 960 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 961 NRFAFLRGELGVI 999 Score = 35.4 bits (71), Expect(3) = 5e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 223 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 312 Score = 39.1 bits (79), Expect(3) = 1e-07 Identities = 27/92 (29%), Positives = 40/92 (43%) Frame = +3 / -2 Query: 1053 PTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGP 1232 P + QK+ P SF +D + A+A Y S +D T+ CFL DH + P Sbjct: 800 PLVLSQKRDTFSKVRP*SFKIDKSQRI*EQQLAAATYSDSAVD*ATLDCFLEDHAINDVP 621 Query: 1233 KNIANPPVERLSSRHPAQSELEKALTSVEGDL 1328 + P V LS +S E L +E ++ Sbjct: 620 RK*HVPLVLFLSILQLPKSASEYPLKYIEDEV 525 Score = 31.3 bits (62), Expect(3) = 1e-07 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMCFV Sbjct: 953 KGLVKISAICNFVSKNCNSTSPFST*SLKK*KRISMCFV 837 Score = 23.1 bits (44), Expect(3) = 1e-07 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 416 TANCMSGLEAVRYNKDPIILLYSF*STAS 330
>LOC_Os01g11110:12001.t00982:unspliced-genomic 14-3-3-like protein, putative, expressed| Length = 12428 Score = 158 bits (339), Expect(3) = 7e-54 Identities = 69/149 (46%), Positives = 100/149 (67%) Frame = -3 / -3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 + VD +YR ++G+L YLT +RPDI F+V F +P T H A KRI RY+K TL Sbjct: 4593 EEVDQHEYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHHQAVKRIFRYIKSTLEY 4414 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S + V AFS++D+AGC DR+ST G F G +L+SWS+RKQ++V++S+ EA Sbjct: 4413 GIWYSCSSALSV*AFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAE 4234 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTP 1076 Y A A+A ++V+W+ S LK+ G+ S P Sbjct: 4233 YVAAASACSQVLWMISTLKDYGLSFSGVP 4147 Score = 69.8 bits (146), Expect(3) = 7e-54 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / -3 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHIEI +HF+ + V + + F+ S+ Q+AD FTK L Sbjct: 4140 CDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKPLDRS 3961 Query: 886 SFEDFKHNLNLI 851 FE + L +I Sbjct: 3960 RFEFLRSELGVI 3925 Score = 23.1 bits (44), Expect(3) = 7e-54 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -3 / -3 Query: 1588 CKPTPTPLSSTEKL 1547 CKP TP+++T L Sbjct: 4653 CKPIATPMATTSSL 4612 Score = 47.3 bits (97), Expect(2) = 2e-07 Identities = 30/81 (37%), Positives = 38/81 (46%) Frame = +3 / +2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 Q +G E P SF ++ T A A+A Y AS +D T C D E + P+ Sbjct: 4139 QSRGTPEKDRP*SFRVEIIQRT*LHALAAATYSASAVD*ATEDCLREDQETKEVPRK*QV 4318 Query: 1248 PPVERLSSRHPAQSELEKALT 1310 P V S HPA+S EKA T Sbjct: 4319 PEVLLRSILHPAKSASEKAQT 4381 Score = 29.0 bits (57), Expect(2) = 2e-07 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 / +1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVL 1009 FCK + L F NK N +S K+ YLNVL Sbjct: 3976 FCKNVCQLFFRFNKL*HNGTFLNIVSEKVVPYLNVL 4083
>LOC_Os05g39130:12005.t03455:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 7208 Score = 192 bits (413), Expect(2) = 7e-54 Identities = 85/204 (41%), Positives = 130/204 (63%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR +VG+L YL +TRPDIS AV+ + F APT+VH+ R++RY++ T + G+ Sbjct: 6528 DPSRYRHIVGSLVYLAVTRPDISHAVHVLSQFTSAPTSVHYAHLLRVLRYLRGTPSRGIF 6707 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 FS+ S + A+S+S WA DR S G+ IF G +L++W ++KQ +SRSS EA +A Sbjct: 6708 FSRDSSLELQAYSDSTWASDPVDRCSITGYCIFLGSSLLAWKSKKQTAISRSSAEAELRA 6887 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 LA TAEVIW++ +L +LG+ S+ +CDN A +++N V H +KHI D F Sbjct: 6888 LATTTAEVIWLRWLLADLGVVLSQPTSLFCDNTSAIQIASNPVKHELSKHIGTDASFTRF 7067 Query: 973 RVANKLLDIRFIHSKDQVADGFTK 902 ++ + + ++ S+ QVAD FTK Sbjct: 7068 HYQHRTICLHYLPSELQVADFFTK 7139 Score = 40.5 bits (82), Expect(2) = 7e-54 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 N HLSQ +Y DL+ + GL K TP+ K+ +G P+ Sbjct: 6393 NGFHLSQHRYTLDLLSRSGLSDDKTAATPMELHLKIRPTDGNPL 6524 Score = 57.4 bits (119), Expect(2) = 8e-11 Identities = 38/115 (33%), Positives = 52/115 (45%) Frame = +3 / -2 Query: 975 SHTK*KSISMCFVLA*KTRLADKYVAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFAS 1154 + K S+ MC + + T ++A LS + E P S S +H+TSAV A Sbjct: 7066 NRVKEASVPMCLLSSCLTGFEAIWIALVLSQNNEVGCERTTPRSASSQRSHITSAVVVAR 6887 Query: 1155 ALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTSVE 1319 A AS L+ E CF R P+ I P +E S+ AQ E E A +S E Sbjct: 6886 ARNSASALEREIAVCFFDFQARREDPRKIQ*PVIEHRSTGSLAQVESE*A*SSSE 6722 Score = 30.4 bits (60), Expect(2) = 8e-11 Identities = 17/31 (54%), Positives = 19/31 (61%) Frame = +3 / -2 Query: 1398 TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 T VGA N* TA EISG V+ +Y R PT Sbjct: 6643 TDVGALVN*LRT*TACEISGRVTARYTRLPT 6551
>LOC_Os08g40660:12008.t03796:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4935 Score = 147 bits (315), Expect(3) = 7e-54 Identities = 61/151 (40%), Positives = 95/151 (62%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P H A KRI+RY+ H L Sbjct: 4246 EAVDQKEYRSMIGSLLYLTTSRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHPLEF 4425 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S E+ Sbjct: 4426 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSIAESE 4605 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+ ++++W+ S LK+ G+ K F Sbjct: 4606 YVVAASCCSQILWLLSTLKDYGLTFEKVHLF 4698 Score = 68.4 bits (143), Expect(3) = 7e-54 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 4696 FCDNTSAINIAKNHVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 4875 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 4876 NCFAFLRGELGII 4914 Score = 35.4 bits (71), Expect(3) = 7e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4138 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4227 Score = 50.6 bits (104), Expect(2) = 1e-08 Identities = 35/107 (32%), Positives = 47/107 (43%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+ P SF +D + A+ Y S +D T+ CFL DH + P+ Sbjct: 4700 QKRCTFSKVRP*SFKVDKSQRICEQQLAATTYSDSAID*ATLDCFLEDHAINDVPRK*HV 4521 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P S F YL IRL A Sbjct: 4520 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSG*FKYLIIRLTA 4380 Score = 29.9 bits (59), Expect(2) = 1e-08 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K +SMCFV Sbjct: 4868 KGLVKISAICNFVSKNCNSTSPFST*SLRK*KRMSMCFV 4752
>LOC_Os12g30770:12012.t02783:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3186 Score = 147 bits (315), Expect(3) = 7e-54 Identities = 62/151 (41%), Positives = 97/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++ +L YLT +RPDI FAV F + H A KRI+RY+ HTL Sbjct: 2497 EAVDQKEYRSMIVSLLYLTASRPDIQFAVCLCARFQASTRASHRQAVKRIMRYLNHTLEF 2676 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 + +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 2677 VIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 2856 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 2857 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 2949 Score = 68.0 bits (142), Expect(3) = 7e-54 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 2947 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 3126 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 3127 NLFAFLRGELGII 3165 Score = 35.9 bits (72), Expect(3) = 7e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 2389 QTKYTNDLLRRFKMENCKPISTPIGSTAVL 2478 Score = 46.9 bits (96), Expect(2) = 5e-08 Identities = 28/87 (32%), Positives = 40/87 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 2951 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 2772 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDL 1328 P V LS P +S E L +E ++ Sbjct: 2771 PLVLFLSILQPPKSASEYPLKHIEDEV 2691 Score = 31.3 bits (62), Expect(2) = 5e-08 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 3114 FSENISNLQLGVQKLQLNISFLNMIPQKVKTNINVLCA*VLNRILSNIDSTSIITKE 2944
>LOC_Os03g55860:12003.t04846:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6241 Score = 121 bits (258), Expect(4) = 9e-54 Identities = 47/114 (41%), Positives = 76/114 (66%) Frame = -3 / +2 Query: 1411 APTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFF 1232 +P H A KRI+RY+ HTL IG+ +S S S +S +S++D+ GC DR+ST G F Sbjct: 5663 SPRASHHQAVKRIMRYLNHTLEIGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFL 5842 Query: 1231 GPNLISWSARKQATVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 G +LI+WS+RKQ++V++ ++E+ Y A A+ ++++W+ S LK+ + K P F Sbjct: 5843 GTSLIAWSSRKQSSVTQLTVESEYVAAASCCSQILWLLSTLKDYSLTFEKVPLF 6004 Score = 69.3 bits (145), Expect(4) = 9e-54 Identities = 30/73 (41%), Positives = 45/73 (61%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++ RF+ +K Q+AD FTK L + Sbjct: 6002 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVEFRFLDTKLQIADIFTKPLDS 6181 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 6182 NRFAFLRGELGII 6220 Score = 42.3 bits (86), Expect(4) = 9e-54 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAV 1436 ++VD +YR ++G+L YLT RPDI FAV Sbjct: 5552 EAVDQKEYRSMIGSLLYLTAYRPDIQFAV 5638 Score = 35.9 bits (72), Expect(4) = 9e-54 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 5444 QTKYTNDLLRRFKMENCKPISTPIGSTAVL 5533 Score = 55.1 bits (114), Expect(3) = 4e-14 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G SF +D + A+A Y S ++ T+ CFL DH + P+ Sbjct: 6006 QKRGTFSKVRL*SFKVDKSQRICEQQLAAATYSDSTVN*VTLDCFLEDHAINDVPRK*HV 5827 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ PI SV F YL IRL A Sbjct: 5826 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPISSV*FKYLIIRLTA 5686 Score = 38.6 bits (78), Expect(3) = 4e-14 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + KP + N +S K+K +NVLC+ + + I V ++I+T E Sbjct: 6169 FSENISNLQLGVQKPKFNISLLNMISQKVKTNINVLCA*VLNRILSNVNSTSIITKE 5999 Score = 22.1 bits (42), Expect(3) = 4e-14 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5637 TANCMSGL*AVRYNKDPIILLYSF*STAS 5551 Score = 33.1 bits (66), Expect = 5.7 Identities = 24/59 (40%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA + NR S S F+T S K*K ISMCFV T +A LS ++ Sbjct: 6174 KGLVKISAICNLVSKNRNSTSPFST*SLKK*KRISMCFVREC*TGFLAMLIALVLSQKR 5998
>LOC_Os11g30000:12011.t02604:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9144 Score = 151 bits (324), Expect(3) = 1e-53 Identities = 64/151 (42%), Positives = 97/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P H A KRI+RY+ HTL Sbjct: 8455 EAVDQKEYRNMIGSLLYLTASRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 8634 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S+ D+AGC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 8635 GIWYSTSSSICLSGYSDVDFAGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 8814 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A + + ++W+ S LK+ G+ K P F Sbjct: 8815 YIAATSCCS*ILWLISTLKDYGLTFEKVPLF 8907 Score = 67.0 bits (140), Expect(3) = 1e-53 Identities = 29/73 (39%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V +++ F+ +K Q+AD FTK L + Sbjct: 8905 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDIELMFLDTKLQLADIFTKPLDS 9084 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 9085 NRFAFLRGELGII 9123 Score = 32.2 bits (64), Expect(3) = 1e-53 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ C+P TP+ ST L Sbjct: 8347 QTKYT*DLLRRFKMENCEPISTPIGSTAVL 8436 Score = 59.7 bits (124), Expect(3) = 7e-14 Identities = 37/107 (34%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF ++ + +A+Y S +D T+ CFL DH + P+ Sbjct: 8909 QKRGTFSKVRP*SFKVEISQRIYEQQLVAAIYSDSAVD*ATLDCFLEDHAINDVPRK*HV 8730 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS PA+S E L +E ++ P SV F YL IRL A Sbjct: 8729 PLVLFLSILQPAKSTSEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 8589 Score = 33.1 bits (66), Expect(3) = 7e-14 Identities = 24/59 (40%), Positives = 30/59 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA+ +F N S S F+T S K*K ISMCFV T +A LS ++ Sbjct: 9077 KGLVKISASCNFVSKNINSMSPFST*SLKK*KRISMCFVREC*TGFLAMLIALVLSQKR 8901 Score = 22.1 bits (42), Expect(3) = 7e-14 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 T +SGL +V+Y + P LY ST S Sbjct: 8540 TTNCMSGLEAVRYNKDPIIFLYSF*STAS 8454
>LOC_Os07g12020:12007.t01074:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5165 Score = 155 bits (334), Expect(3) = 1e-53 Identities = 63/151 (41%), Positives = 100/151 (66%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ TL Sbjct: 4476 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQVSPRASHRQAVKRIMRYLNQTLEF 4655 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G IF G +LI+WS++KQ++V++S+ E+ Sbjct: 4656 GIWYSTSSSIYLSGYSDADFGGCRIDRKSTSGTCIFLGTSLIAWSSKKQSSVAQSTAESE 4835 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+ + ++++W+ S LK+ G+ K P F Sbjct: 4836 YVAVTSCCSQILWLLSTLKDYGLTFEKVPLF 4928 Score = 63.4 bits (132), Expect(3) = 1e-53 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V + ++ + +K Q+AD FTK L + Sbjct: 4926 FCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVKLQLLDTKLQLADIFTKPLDS 5105 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5106 NRFAFLRGELGII 5144 Score = 31.3 bits (62), Expect(3) = 1e-53 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSS 1559 Q KY D++++ ++ CKP TP+ S Sbjct: 4368 QTKYMKDILRRFKMENCKPISTPIGS 4445 Score = 61.6 bits (128), Expect(3) = 8e-14 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + +A Y S +D T+ CFL DH + P+ I Sbjct: 4930 QKRGTFSKVRP*SFKVDKSQRICEQQLVTATYSDSAVD*ATLDCFLEDHAINDVPRKIHV 4751 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 4750 PLVLFLSILQPPKSASEYPLKYIEDEVEYQIPNSSVWFKYLIIRLTA 4610 Score = 30.4 bits (60), Expect(3) = 8e-14 Identities = 23/59 (38%), Positives = 29/59 (49%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA+ +F N S F+T S K*K ISMCFV T +A LS ++ Sbjct: 5098 KGLVKISASCNFVSNNCNLTSPFST*SLKK*KRISMCFVREC*TGFLAMLIALVLSQKR 4922 Score = 23.1 bits (44), Expect(3) = 8e-14 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 4561 TANCMSGLEAVRYNKDPIILLYSF*STAS 4475
>LOC_Os12g22740:12012.t02012:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4548 Score = 155 bits (332), Expect(3) = 1e-53 Identities = 64/151 (42%), Positives = 100/151 (66%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 +++D +YR ++G+L YLT+ RPDI FAV F +P H A K I+RY+ HTL Sbjct: 3859 ETIDQKEYRSMIGSLLYLTVFRPDIQFAVCLCACFQASPRASHRQAVK*IMRYLNHTLEF 4038 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+AGC DR+ST G F G +LI+WS +KQ++V++S+ E+ Sbjct: 4039 GIWYSTSSSICLSGYSDADFAGCRIDRKSTSGTCHFLGTSLIAWSYKKQSSVAQSTAESK 4218 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A+A+ ++++W+ S LKE G+ K P F Sbjct: 4219 YVAVASCCSQILWLISTLKEYGLTFEKVPLF 4311 Score = 60.6 bits (126), Expect(3) = 1e-53 Identities = 27/73 (36%), Positives = 43/73 (58%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V ++RTKHI+I FHF + V +++ F+ +K Q+ D FTK L + Sbjct: 4309 FCDNTSAINIAKNPVQYSRTKHIDIRFHFSRDHVEKGDVELTFLDTKLQLVDIFTKPLDS 4488 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 4489 NRFAFIRGELGII 4527 Score = 34.5 bits (69), Expect(3) = 1e-53 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSST 1556 Q KY DL+++ ++ CKP TP+ ST Sbjct: 3753 QTKYMKDLLRRFKMENCKPISTPIGST 3833 Score = 58.8 bits (122), Expect(2) = 4e-11 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 4313 QKRGTFSKVRPYSFKVDISQRICEQQLATATYLDSAVD*ATLDCFL*DHAINDVPRK*HV 4134 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS PA+S E L +E ++ P SV F YL I L A Sbjct: 4133 PLVLFLSILQPAKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIHLTA 3993 Score = 29.9 bits (59), Expect(2) = 4e-11 Identities = 19/44 (43%), Positives = 24/44 (54%) Frame = +3 / -2 Query: 942 NRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 N S S F+T S K*K ISMCFV T ++A LS ++ Sbjct: 4436 NVNSTSPFST*SLEK*KRISMCFVREY*TGFLAIFIALVLSQKR 4305
>LOC_Os03g37890:12003.t03241:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2694 Score = 148 bits (318), Expect(3) = 1e-53 Identities = 61/149 (40%), Positives = 96/149 (64%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 V+ +YR ++G+L YLT +RPDI F + F +P H A KRI+RY+ HTL G+ Sbjct: 2011 VNQKEYRSMIGSLLYLTASRPDIQFVMCLCARFQASPRASHRQAVKRIMRYLNHTLEFGM 2190 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Y Sbjct: 2191 WYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYV 2370 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCF 1070 A A+ ++++W+ S LK+ G+ K F Sbjct: 2371 AAASCCSQILWLLSTLKDYGLTFEKVTLF 2457 Score = 68.4 bits (143), Expect(3) = 1e-53 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 2455 FCDNTSAINIAKNPVHHSRTKHIDICFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 2634 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 2635 NRFAFLRGELGVI 2673 Score = 33.1 bits (66), Expect(3) = 1e-53 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLME 1535 Q KY DL+++ ++ CK TP+ ST L +E Sbjct: 1897 QTKYTKDLLRRFKMENCKQISTPIGSTAVLDPVE 1998 Score = 56.1 bits (116), Expect(2) = 4e-11 Identities = 37/107 (34%), Positives = 49/107 (45%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+ P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 2459 QKRVTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 2280 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 2279 PLVLFLSILQPPKSASEYPLKHIEDEVEYHIPNSSV*FKYLIIRLTA 2139 Score = 32.7 bits (65), Expect(2) = 4e-11 Identities = 18/63 (28%), Positives = 34/63 (53%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + N + K+K +NVLC+ + + I + ++I+T E+ Sbjct: 2622 FSENISNLQLGVQKLQFNISLLNMIPQKVKTNINVLCA*VVNRILSNIDSTSIITKESYF 2443 Query: 1082 LRA 1090 L++ Sbjct: 2442 LKS 2434
>LOC_Os10g20660:12010.t01559:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5177 Score = 142 bits (305), Expect(3) = 2e-53 Identities = 61/147 (41%), Positives = 92/147 (62%) Frame = -3 / +3 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 VD Y ++G+L YLT +RPDI F+V F AP H A KRI+RY+KH+ IGL Sbjct: 4494 VDLKLYHSMIGSLLYLTASRPDIMFSVCMCARFQVAPKECHLVAVKRILRYLKHSSIIGL 4673 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 + K + +S+SD+AGC DR+ST G G +L+SWS++KQ +V+ S+ EA Y Sbjct: 4674 WYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYV 4853 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTP 1076 + + A+++W++ +L + GI +KTP Sbjct: 4854 SAGSCCAQLLWMKQILLDYGISFTKTP 4934 Score = 64.3 bits (134), Expect(3) = 2e-53 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = -3 / +3 Query: 1066 CDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQ 887 CDN A ++ N V H+RTKHI+I HF+ + V + I I ++DQ+AD FTK L Sbjct: 4941 CDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVVKSDIVISHIRTEDQLADIFTKPLDET 5120 Query: 886 SFEDFKHNLNLI 851 F ++ LN+I Sbjct: 5121 RFCKLRNELNVI 5156 Score = 42.8 bits (87), Expect(3) = 2e-53 Identities = 19/42 (45%), Positives = 25/42 (59%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEG 1532 K+ LSQ KY DL+K+ GL+ KP TP+ + L L EG Sbjct: 4359 KDGTFLSQTKYIKDLLKRFGLEDAKPIKTPMVTNGHLDLDEG 4484 Score = 36.8 bits (74), Expect(3) = 3e-10 Identities = 26/76 (34%), Positives = 34/76 (44%) Frame = +3 / -2 Query: 1071 KQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANP 1250 + GVL +P S + A + Y AS ++ T CFL DH+ R P P Sbjct: 4939 RSGVLVKDMP*SNKICFIQSNWAQQLPAETYSASAVERATEFCFLDDHDTRDLPSIWQLP 4760 Query: 1251 PVERLSSRHPAQSELE 1298 V LS+ PA SE E Sbjct: 4759 DVLFLSTLQPA*SESE 4712 Score = 35.0 bits (70), Expect(3) = 3e-10 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +3 / -2 Query: 1338 RPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVK 1472 +PI CF YL I A K* +GA N + T ISGL +V+ Sbjct: 4672 KPIIEECFKYLRILFTATK*HSLGAT*NRAHMQTLNMISGLDAVR 4538 Score = 30.9 bits (61), Expect(3) = 3e-10 Identities = 22/58 (37%), Positives = 32/58 (55%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQ 1070 + V SA+*S + M+ SL T S K* +S+C VL T L ++A +LSH+ Sbjct: 5110 RGLVKISAS*SSVLMWLMTMSLLTTWSLRK*WRMSICLVLECWTGLLAIFMALSLSHR 4937
>LOC_Os04g24570:12004.t02169:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6260 Score = 192 bits (413), Expect(2) = 2e-53 Identities = 89/237 (37%), Positives = 135/237 (56%) Frame = -3 / +2 Query: 1552 KLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRI 1373 +L L + + VD T+YR LVG+L YL TRPD++++V V F+ PT H A KRI Sbjct: 5126 RLKLSKESAGSLVDATEYRSLVGSLHYLVNTRPDLAYSVGYVSRFMEKPTDEHLAAVKRI 5305 Query: 1372 VRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQA 1193 +RYV T+++G + K + +S+SD AG +D R+ST G F G N +SW ++KQ Sbjct: 5306 IRYVAGTIHLGCRYVKEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKNPVSWQSQKQR 5485 Query: 1192 TVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHAR 1013 V+ SS E+ Y A A A + IW+ +L +L +++ DN A L N VFH R Sbjct: 5486 VVALSSCESEYIAAATAACQGIWLARLLGDLRNAATEVVDLRVDNQSALALMKNPVFHDR 5665 Query: 1012 TKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 +KHI+ FHF+ E V N + +I ++ Q+AD TK L F++ + + + +* Sbjct: 5666 SKHIQTKFHFIREAVENGEITPSYIGTEGQLADILTKPLSRIKFQELREQIGMFPV* 5836 Score = 39.1 bits (79), Expect(2) = 2e-53 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -3 / +2 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 L Q YA+ +V+K GL GC P TP+ KLS Sbjct: 5042 LKQAAYASRIVEKAGLTGCNPCATPMEPRLKLS 5140
>LOC_Os04g21100:12004.t01844:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2583 Score = 183 bits (395), Expect(3) = 2e-53 Identities = 75/157 (47%), Positives = 108/157 (68%) Frame = -3 / +1 Query: 1324 SPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALAN 1145 S + +SA+S++DWAGC D R+ST G+ +F G NL+SWS+++Q TVSRSS EA Y A+AN Sbjct: 1147 SDADWMSAYSDADWAGCPDTRKSTSGYGVFLGDNLVSWSSKRQLTVSRSSAEAEYCAVAN 1326 Query: 1144 ATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVA 965 A AE W++ +L EL S++ +CDN+ A YLS+N V H RTKH++ID HFV +RVA Sbjct: 1327 AVAETCWLRQLLHELHTPPSRSTLVFCDNISAVYLSSNPVQHQRTKHVKIDLHFVRDRVA 1506 Query: 964 NKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 + + + + Q AD FTK L + F +F+ +LN+ Sbjct: 1507 AGSVRVLHVPTTSQFADIFTKGLPSAIFSEFRSSLNV 1617 Score = 51.5 bits (106), Expect(3) = 2e-53 Identities = 17/44 (38%), Positives = 29/44 (65%) Frame = -3 / +1 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + LHLSQ +Y +++++ G+ CKP TP+ + KLS +G P+ Sbjct: 796 SGLHLSQRQYCLEVLERAGMTDCKPCATPVDTNAKLSAADGAPV 927 Score = 24.0 bits (46), Expect(3) = 2e-53 Identities = 11/30 (36%), Positives = 14/30 (46%) Frame = -2 / +2 Query: 680 P*GSSCSGRRTERLRVYDLTFFSPTTKKVV 591 P S+C R R R Y L+ P+T V Sbjct: 2369 PCSSACPARSPCRRRPYHLSLLIPSTSDTV 2458 Score = 95.0 bits (201), Expect = 1e-18 Identities = 40/83 (48%), Positives = 54/83 (65%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D T YR L GAL YLT TRPDIS+AV +VC +H P H A K I+RYV+ T++ GL+ Sbjct: 931 DPTDYRSLSGAL*YLTFTRPDISYAVQQVCLHMHDPREPHLAALKCILRYVRGTVDYGLH 1110 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDD 1265 +S + +SA+S++DW D Sbjct: 1111 IRRSSTVDLSAYSDADWMSAYSD 1179 Score = 48.7 bits (100), Expect(2) = 2e-07 Identities = 33/85 (38%), Positives = 43/85 (50%) Frame = +3 / -2 Query: 1239 IANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACK 1418 ++ P + S QS E AL S + RP +V T + L A +* G+C Sbjct: 1205 VSGQPAQSASEYALIQSASEYALKSTVEERRM*RP*STVPRT*RKMHLRAAR*GSRGSCM 1026 Query: 1419 N*HTLFTAKEISGLVSVKY*RAPTR 1493 T +TA EISGLV V+Y*RAP R Sbjct: 1025 *RQTCWTA*EISGLVKVRY*RAPER 951 Score = 27.2 bits (53), Expect(2) = 2e-07 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER* 1646 G PS +S +++ GV GLQ P S Y+ * R* Sbjct: 923 GAPSAAESLALVSTGVAHGLQSVMPARSRTSRQYWR*LR* 804 Score = 53.8 bits (111), Expect = 4e-06 Identities = 28/62 (45%), Positives = 36/62 (58%) Frame = +3 / -2 Query: 1122 THMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEK 1301 + SA A A+A Y AS L+ +TV+ L D E +L P+N P V+ L S PAQS E Sbjct: 1349 SQQVSATALATAQYSASALERDTVS*RLEDQETKLSPRNTP*PEVDFLVSGQPAQSASEY 1170 Query: 1302 AL 1307 AL Sbjct: 1169 AL 1164 Score = 28.1 bits (55), Expect(2) = 0.50 Identities = 15/59 (25%), Positives = 24/59 (40%) Frame = -2 / +3 Query: 1469 DTYKT*YLLCCKQGVLVFTCTNHSSLHSCQAYSKICETYAEYWSKFQQVPFYTCECFF* 1293 D ++ YLLCC G+ + +S Q + +C + WS + EC * Sbjct: 975 DFHQARYLLCCPAGLSSHARSTGASSCCSQMHLALCPWHG*LWSSHPPLLHC*LECIL* 1151 Score = 25.8 bits (50), Expect(2) = 0.50 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -2 / +3 Query: 1307 ECFF*FRLGRMPR*QTFNRWVCNIFWT*SHFMVC*KTSHCFQI*HRGRV 1161 EC * LGR+ R Q + + + W +V +++C + RGR+ Sbjct: 1164 ECIL*C*LGRLSRHQEIHLGLWCVPWRQLGLLVLQTSAYCIALQCRGRI 1310
>LOC_Os12g26190:12012.t02335:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5704 Score = 148 bits (317), Expect(3) = 2e-53 Identities = 62/151 (41%), Positives = 99/151 (65%) Frame = -3 / +2 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FA+ F +P H A KRI+RY+ HTL Sbjct: 5015 EAVDQKEYRSMIGSLLYLTASRPDIQFAMCLCARFQASPRASHRQAVKRIMRYLNHTLKF 5194 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ ++ Sbjct: 5195 GIWYSTSFSIYLSGYSDADFGGCRIDRKSTSGTCHFLGISLIAWSSRKQSSVAQSTAKSE 5374 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ +++ W+ S+LK+ G+ K F Sbjct: 5375 YVAAASCCSQIPWLLSILKDYGLTFEKVHLF 5467 Score = 66.6 bits (139), Expect(3) = 2e-53 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +2 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5465 FCDNTIAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5644 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5645 NRFAFLRGELGII 5683 Score = 34.5 bits (69), Expect(3) = 2e-53 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +2 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4907 QMKYMKDLLRRFKMENCKPISTPIGSTAVL 4996 Score = 51.9 bits (107), Expect(2) = 7e-10 Identities = 36/107 (33%), Positives = 48/107 (44%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+ P SF +D + A+A Y +D T+ CFL DH + P+ Sbjct: 5469 QKRCTFSKVRP*SFKIDKSQGICEQQLAAATYSDLAVD*ATLDCFLEDHAINDIPRK*HV 5290 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5289 PLVLFLSILQPPKSASEYPLKYIENEVEYQIPNLSV*FKYLIIRLTA 5149 Score = 32.7 bits (65), Expect(2) = 7e-10 Identities = 18/63 (28%), Positives = 34/63 (53%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + + N + K+K +NVLC+ + + I + ++I+T E Sbjct: 5632 FSENISNLQLRVQKLQLNISLLNMIPQKVKTNINVLCA*VLNRILSNIDSNSIITKEMYF 5453 Query: 1082 LRA 1090 L++ Sbjct: 5452 LKS 5444
>LOC_Os05g12060:12005.t01036:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5658 Score = 149 bits (321), Expect(3) = 2e-53 Identities = 63/151 (41%), Positives = 97/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI F V F +P +H A K I+RY+ HTL Sbjct: 4969 EAVDQKEYRSMIGSLLYLTASRPDIQFVVCLCARFQASPRVLHRQAVK*IMRYLNHTLEF 5148 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5149 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTFHFLGTSLITWSSRKQSSVAQSTAESE 5328 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ + ++W+ S LK G+ K P F Sbjct: 5329 YVAAASYCSHILWLLSTLKYYGLTFEKVPIF 5421 Score = 64.8 bits (135), Expect(3) = 2e-53 Identities = 29/73 (39%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A + N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5419 FCDNTSAINNAKNPVQHSRTKHIDIRFHFLRDHVDKGDVELQFLDTKLQLADIFTKPLDS 5598 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5599 NRFAFLRGELGII 5637 Score = 34.5 bits (69), Expect(3) = 2e-53 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL ++ ++ CKP TP+ ST L Sbjct: 4861 QTKYTKDLFRRFKMENCKPISTPIGSTAVL 4950 Score = 50.6 bits (104), Expect(3) = 3e-10 Identities = 36/107 (33%), Positives = 47/107 (43%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK G P F +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 5423 QKIGTFSKVRP*YFKVDKSQRICEQ*LAAATYSDSAVD*ATLDCFLEDHVINDVPRK*NV 5244 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL I L A Sbjct: 5243 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIHLTA 5103 Score = 29.5 bits (58), Expect(3) = 3e-10 Identities = 19/39 (48%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA+ +F N S S +T S K*K ISMCFV Sbjct: 5591 KGLVKISASCNFVSKNCNSTSPLST*SLKK*KRISMCFV 5475 Score = 22.6 bits (43), Expect(3) = 3e-10 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / -2 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 T ISGL +V+Y + P LY ST S Sbjct: 5054 TTNCISGLEAVRYNKDPIILLYSF*STAS 4968
>LOC_Os09g21390:12009.t01873:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2868 Score = 197 bits (424), Expect(2) = 3e-53 Identities = 86/221 (38%), Positives = 137/221 (61%) Frame = -3 / +1 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR +VG+L YLT+TRPDI+ V+ + F+ APT+VH++ R++RY++ T + L Sbjct: 2173 DPSRYRQIVGSLVYLTITRPDIAHIVHVLSQFVSAPTSVHYSHLLRVLRYLRGTASRQLF 2352 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +++S + A+S+S WA DRRS G+ IF G +LI+W ++KQ VSRSS E+ +A Sbjct: 2353 YARSSQLHLHAYSDSTWASDPMDRRSITGYCIFLGTSLIAWKSKKQTAVSRSSTESELRA 2532 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 LA T+E++W++ +L +LG++ CDN GA ++ + V H TKHI +D F Sbjct: 2533 LATTTSEIVWLRWLLSDLGVECKDPTPLLCDNTGAIQIANDPVKHELTKHIGVDASFTRS 2712 Query: 973 RVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLI 851 + +R++ S+ QVAD FTKA + + LN+I Sbjct: 2713 HCQQSTISLRYVPSELQVADFFTKAQTREQHRLYILKLNVI 2835 Score = 33.6 bits (67), Expect(2) = 3e-53 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -3 / +1 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 ++ +LSQ +Y DL+ + GL K TP+ +L EG ++ Sbjct: 2035 EDGYYLSQHRYIDDLITRSGLTDTKTATTPMELHVQLRSTEGVLLE 2172 Score = 45.5 bits (93), Expect(2) = 7e-06 Identities = 27/69 (39%), Positives = 34/69 (49%) Frame = +3 / -2 Query: 1098 PNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRH 1277 P S + + S V ASA S+LDL+T CFL MR P+ I P ++R S Sbjct: 2588 PRSDNNQRSQTISEVVVASARSSDSVLDLDTAVCFLDFQAMREVPRKIQYPVIDRRSIGS 2409 Query: 1278 PAQSELEKA 1304 AQ E E A Sbjct: 2408 LAQVESEYA 2382 Score = 25.4 bits (49), Expect(2) = 7e-06 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = +3 / -2 Query: 1395 *TVVGACKN*HTLFTAKEISGLVSVKY*RAPT 1490 *T VGA N* + T ISGLV V+ R PT Sbjct: 2291 *TEVGALTN*LST*TM*AISGLVIVR*TRLPT 2196
>LOC_Os10g03000:12010.t00189:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1485 Score = 153 bits (329), Expect(3) = 3e-53 Identities = 63/151 (41%), Positives = 98/151 (64%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++V+ +YR ++G+L YLT RPDI F V F +P H A KRI+RY+ HTL Sbjct: 796 EAVNQKEYRSMIGSLLYLTAYRPDIQFVVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 975 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 976 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 1155 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 1156 YVAAASCCSQILWLLSTLKDYGLTFEKVPLF 1248 Score = 65.2 bits (136), Expect(3) = 3e-53 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+ TKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 1246 FCDNTSAINIAKNPVQHSHTKHIDIRFHFLRDHVEKGDVELQFLDTKLQLADIFTKPLDS 1425 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 1426 NRFAFLRGELGII 1464 Score = 30.4 bits (60), Expect(3) = 3e-53 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSS 1559 Q KY DL++ ++ CKP TP+ S Sbjct: 688 QTKYTKDLLRWFKMENCKPISTPIGS 765 Score = 59.3 bits (123), Expect(2) = 3e-12 Identities = 38/107 (35%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S +D T+ CFL DH + P+ Sbjct: 1250 QKRGTFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HV 1071 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 1070 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLTA 930 Score = 33.6 bits (67), Expect(2) = 3e-12 Identities = 24/59 (40%), Positives = 30/59 (50%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFVLA*KTRLADKYVAPTLSHQK 1073 K V SA+ +F N S S F+T S K*K ISMCFV T +A LS ++ Sbjct: 1418 KGLVKISASCNFVSKNCNSTSPFST*SLKK*KRISMCFVCEC*TGFLAMLIALVLSQKR 1242
>LOC_Os08g03180:12008.t00212:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4803 Score = 133 bits (286), Expect(3) = 3e-53 Identities = 61/159 (38%), Positives = 92/159 (57%) Frame = -3 / +3 Query: 1330 SKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKAL 1151 S S S ++ F++SD AG +DDRRSTGG A + +L+SW ++KQ TV+ SS EA + A Sbjct: 4011 SGSGSLDITGFTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAA 4190 Query: 1150 ANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*ER 971 A +W++++L E+ +K + DN A L N VFH R+KHI+ +HF+ E Sbjct: 4191 TAAACHALWLRALLSEMMGTEAKRVKLFVDNKSAIALMKNPVFHGRSKHIDTRYHFIREC 4370 Query: 970 VANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNL 854 V + + I F+ S++Q AD TK L +H L + Sbjct: 4371 VESGQILIEFVRSEEQRADAMTKGLPAAKLATARHLLGV 4487 Score = 80.8 bits (170), Expect(3) = 3e-53 Identities = 35/89 (39%), Positives = 53/89 (59%) Frame = -3 / +3 Query: 1576 PTPLSSTEKLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTV 1397 PT + + L + + +D T+YR ++G L+YL TRPD+S+AV F+ PTT+ Sbjct: 3762 PTSIPMEPRSLLHKDADGNPIDATEYRRVIGCLRYLLHTRPDLSYAVGVASRFMERPTTM 3941 Query: 1396 HFTAAKRIVRYVKHTLNIGLNFSKSPSTL 1310 H A K I+RY+K TL+ GL F+ +L Sbjct: 3942 HLKAVKMILRYLKGTLDSGLVFASGSGSL 4028 Score = 34.1 bits (68), Expect(3) = 3e-53 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -3 / +3 Query: 1657 KNALHLSQEKYATDLVKKPGLQGCKPTPTPL 1565 +N + + Q YA ++ + G+QGC PT P+ Sbjct: 3687 ENGIAIKQAAYAKKILSQFGMQGCNPTSIPM 3779 Score = 44.6 bits (91), Expect = 0.002 Identities = 32/93 (34%), Positives = 42/93 (45%) Frame = +3 / -3 Query: 1236 NIANPPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGAC 1415 N P + R S ++ +++ L RP SV F YL+I L A++ VVG Sbjct: 4102 NAMPPVLRRSSMSPAKSLSVKPVMSNEPLPLANTRPESSVPFRYLSIILTALRCIVVGRS 3923 Query: 1416 KN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVS 1514 N TA + SGLV KY R P Y V S Sbjct: 3922 MNLLATPTA*DRSGLVCNKYRRHPMTRRYSVAS 3824
>LOC_Os10g29420:12010.t02286:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5571 Score = 192 bits (414), Expect(2) = 5e-53 Identities = 89/237 (37%), Positives = 136/237 (57%) Frame = -3 / +1 Query: 1552 KLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRI 1373 +L L + + VD T+YR LVG+L+YL TRPD++++V V F+ PT H A KRI Sbjct: 4522 RLKLSKESAGSLVDATEYRSLVGSLRYLVNTRPDLAYSVGYVSRFMEKPTDEHLAAVKRI 4701 Query: 1372 VRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQA 1193 +RYV T+++G + K + +S+SD AG +D R+ST G F G N +SW ++KQ Sbjct: 4702 IRYVAGTIHLGCRYVKEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKNPVSWQSQKQR 4881 Query: 1192 TVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHAR 1013 V+ SS E+ Y A A A + IW+ +L +L +++ DN A L N VFH R Sbjct: 4882 VVALSSCESEYIAAATAACQGIWLARLLGDLRNAATEVVDLRVDNQSALALMKNPVFHDR 5061 Query: 1012 TKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 +KHI+ FHF+ E V N + +I ++ Q+AD TK L F++ + + + +* Sbjct: 5062 SKHIQTKFHFIREAVENGEITPSYIGTEGQLADILTKPLSRIKFQELREQIGMFPV* 5232 Score = 37.3 bits (75), Expect(2) = 5e-53 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 L Q Y + +V+K GL GC P TP+ KLS Sbjct: 4438 LKQAAYVSRIVEKAGLTGCNPCATPMEPRLKLS 4536
>LOC_Os04g30650:12004.t02751:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5684 Score = 144 bits (308), Expect(3) = 6e-53 Identities = 60/140 (42%), Positives = 92/140 (65%) Frame = -3 / +3 Query: 1489 VGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLNFSKSPSTL 1310 +G+L YLT +RPDI FAV F +P + A KRI+RY+ HTL G+ +S S S Sbjct: 5028 IGSLLYLTASRPDIQFAVCLCARFQASPRASYRQAVKRIMRYLNHTLEFGIWYSTSSSIC 5207 Query: 1309 VSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKALANATAEV 1130 +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++S+ E+ Y A A++ +++ Sbjct: 5208 LSRYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTTESEYVAAASSCSQI 5387 Query: 1129 IWVQSMLKELGIKSSKTPCF 1070 W+ S LK+ G+ K P F Sbjct: 5388 FWLLSTLKDYGLTFEKVPLF 5447 Score = 68.4 bits (143), Expect(3) = 6e-53 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTKHI+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5445 FCDNTSAINIAKNHVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5624 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5625 NHFAFLRGELGII 5663 Score = 35.4 bits (71), Expect(3) = 6e-53 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4888 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4977 Score = 60.2 bits (125), Expect(2) = 3e-12 Identities = 38/107 (35%), Positives = 51/107 (47%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S++D T+ CFL DH + P+ Sbjct: 5449 QKRGTFSKVRP*SFKVDKSQKICEQELAAATYSDSVVD*ATLDCFLEDHAINDVPRK*HV 5270 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 5269 PLVLFLSILQPPKSASEYLLKHIEDEVEYQIPNSSV*FKYLIIRLTA 5129 Score = 32.7 bits (65), Expect(2) = 3e-12 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 / -2 Query: 897 KAFVNPSAT*SFE*INRMSKSLFATLSHTK*KSISMCFV 1013 K V SA +F N S S F+T S K*K ISMCFV Sbjct: 5617 KGLVKISAICNFVSKNCNSTSPFST*SRRK*KRISMCFV 5501
>LOC_Os12g26650:12012.t02378:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2649 Score = 155 bits (333), Expect(3) = 6e-53 Identities = 63/151 (41%), Positives = 99/151 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FA+ F +P H A KRI+RY+ HTL Sbjct: 1990 EAVDQKEYRSMIGSLLYLTASRPDIQFAICLCARFQASPRASHRQAIKRIMRYLNHTLEF 2169 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ GC DR+ST G F G +LI+WS+RKQ++V++ + E+ Sbjct: 2170 GIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQLTAESE 2349 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 2350 YVAAASCCSQILWLLSTLKDYGLTFEKAPLF 2442 Score = 59.7 bits (124), Expect(3) = 6e-53 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 / +1 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+R KHI+I FHF+ + V + ++F+ +K Q+AD F K L + Sbjct: 2440 FCDNTSAINIAKNPVQHSRAKHIDIRFHFLRDHVEKGDVQLQFLDTKLQIADIFPKPLDS 2619 Query: 889 QSF 881 F Sbjct: 2620 NRF 2628 Score = 32.7 bits (65), Expect(3) = 6e-53 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSS 1559 Q KY DL+++ ++ CKP TP+ S Sbjct: 1882 QTKYTKDLLRRFKMENCKPISTPIGS 1959 Score = 56.5 bits (117), Expect(2) = 4e-11 Identities = 37/107 (34%), Positives = 50/107 (46%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G P SF +D + A+A Y S ++ T+ CFL DH + P+ Sbjct: 2444 QKRGAFSKVRP*SFKVDKSQRICEQQLAAATYSDSAVN*ATLDCFLEDHAINDVPRK*HV 2265 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS P +S E L +E ++ P SV F YL IRL A Sbjct: 2264 PLVLFLSILQPPKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLIA 2124 Score = 32.2 bits (64), Expect(2) = 4e-11 Identities = 19/63 (30%), Positives = 34/63 (53%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPETGS 1081 F + ISNL + K + + N + K+K +NVLC+ + + I V ++I+T E Sbjct: 2607 FRENISNLQLCIQKLQLNISLLNMIPQKVKTNINVLCA*VLNRILSNVNSTSIITKERCF 2428 Query: 1082 LRA 1090 L++ Sbjct: 2427 LKS 2419
>LOC_Os07g05600:12007.t00443:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4734 Score = 190 bits (409), Expect(2) = 6e-53 Identities = 87/225 (38%), Positives = 130/225 (57%) Frame = -3 / +1 Query: 1516 VDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGL 1337 VD T+YR LVG+L+YL TRPD++++V V F+ PT H A KRI+RYV T+++G Sbjct: 3616 VDATEYRSLVGSLRYLVNTRPDLAYSVGYVSRFMEKPTDEHLAAVKRIIRYVAGTIHLGC 3795 Query: 1336 NFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYK 1157 + K + +S+SD AG +D R+ST G F G N +SW ++KQ V+ SS E+ Y Sbjct: 3796 RYVKEGEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKNPVSWQSQKQRVVALSSCESEYI 3975 Query: 1156 ALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV* 977 A A A + IW+ +L +L +++ DN A L N VFH R+KHI+ FHF+ Sbjct: 3976 AAATAACQGIWLARLLGDLRNAATEVVDLRVDNQSALALMKNPVFHDRSKHIQTKFHFIR 4155 Query: 976 ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFKHNLNLIKL* 842 E V N + +I + Q+AD TK L F++ + + + +* Sbjct: 4156 EAVENGEITPSYIGIEGQLADILTKPLSRIKFQELREQIGMFPV* 4290 Score = 39.1 bits (79), Expect(2) = 6e-53 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -3 / +1 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 L Q YA+ +V+K GL GC P TP+ KLS Sbjct: 3496 LKQAAYASRIVEKAGLTGCNPCATPMEPCLKLS 3594
>LOC_Os11g43560:12011.t03886:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 4729 Score = 190 bits (409), Expect(2) = 6e-53 Identities = 88/228 (38%), Positives = 132/228 (57%) Frame = -3 / +3 Query: 1552 KLSLMEGTPIDSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRI 1373 +L L + + VD T+YR LVG+L+YL TRPD++++V V F+ PT H A KRI Sbjct: 3765 RLKLSKESAGSLVDATEYRSLVGSLRYLVNTRPDLAYSVGYVSRFMEKPTDEHLAAVKRI 3944 Query: 1372 VRYVKHTLNIGLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQA 1193 +RYV T+++G + K + +S+SD AG +D R+ST G F G N +SW ++KQ Sbjct: 3945 IRYVAGTIHLGCRYVKEVEGGLQGYSDSDMAGDIDTRKSTTGVIFFLGKNPVSWQSQKQR 4124 Query: 1192 TVSRSSIEAGYKALANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHAR 1013 V+ SS E+ Y A A A + IW+ +L +L +++ DN A L N VFH R Sbjct: 4125 VVALSSCESEYIAAATAACQGIWLARLLGDLRNAATEVVDLRVDNQSALALMKNPVFHDR 4304 Query: 1012 TKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRTQSFEDFK 869 +KHI+ FHF+ E V N + +I ++ Q+AD TK L F++ + Sbjct: 4305 SKHIQTKFHFIREAVENGEITPSYIGTEGQLADILTKPLSRIKFQELR 4448 Score = 39.1 bits (79), Expect(2) = 6e-53 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -3 / +3 Query: 1642 LSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLS 1544 L Q YA+ +V+K GL GC P TP+ KLS Sbjct: 3681 LKQAAYASRIVEKAGLTGCNPCATPMEPRLKLS 3779
>LOC_Os10g29650:12010.t02305:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 9352 Score = 188 bits (404), Expect(2) = 1e-52 Identities = 82/205 (40%), Positives = 126/205 (61%) Frame = -3 / +2 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D ++YR LVG+L YLT+TRPDI++AV+ + F+ AP +VH+ R++RY++ T L Sbjct: 4556 DPSRYRHLVGSLVYLTVTRPDIAYAVHILSQFVSAPISVHYGHLLRVLRYLRGTTTQCLF 4735 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 ++ S + AFS+S WA DRRS G+ IF G +L++W ++KQ VSRSS EA +A Sbjct: 4736 YAASSPLQLRAFSDSTWASDPIDRRSVTGYCIFLGTSLLTWKSKKQTAVSRSSTEAELRA 4915 Query: 1153 LANATAEVIWVQSMLKELGIKSSKTPCFWCDNVGATYLSANLVFHARTKHIEIDFHFV*E 974 LA T+E++W++ +L + G+ CDN GA ++ + + H TKHI +D F Sbjct: 4916 LATTTSEIVWLRWLLADFGVSCDVPTPLLCDNTGAIQIANDPIKHELTKHIGVDASFTRS 5095 Query: 973 RVANKLLDIRFIHSKDQVADGFTKA 899 + + ++ S+ QVAD FTKA Sbjct: 5096 HCQQSTIALHYVPSELQVADFFTKA 5170 Score = 40.5 bits (82), Expect(2) = 1e-52 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -3 / +2 Query: 1645 HLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPID 1520 +LSQ +Y DL+ + GL + T TP+ +L +GTP+D Sbjct: 4430 YLSQHRYIEDLLAQSGLTDSRTTTTPMELHVRLRSTDGTPLD 4555 Score = 56.1 bits (116), Expect(2) = 4e-11 Identities = 34/86 (39%), Positives = 40/86 (46%) Frame = +3 / -2 Query: 1047 VAPTLSHQKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRL 1226 +AP LSH++ P S S H S V A A AS+LD +T CFL R Sbjct: 5022 IAPVLSHKRGVGTSQETPKSASSQRNHTISEVVVARARSSASVLDRDTAVCFLDFQVRRE 4843 Query: 1227 GPKNIANPPVERLSSRHPAQSELEKA 1304 P+ I P ER S AQ E EKA Sbjct: 4842 VPRKIQ*PVTERRSIGSLAQVESEKA 4765 Score = 32.7 bits (65), Expect(2) = 4e-11 Identities = 20/44 (45%), Positives = 26/44 (59%) Frame = +3 / -2 Query: 1395 *TVVGACKN*HTLFTAKEISGLVSVKY*RAPTRHLYLVVSTESI 1526 *T +GA N* + TA ISGLV+V+ R PTR Y S+ + Sbjct: 4674 *TEIGALTN*LKI*TA*AISGLVTVR*TRLPTRCRYREGSSRGV 4543
>LOC_Os12g26570:12012.t02370:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2648 Score = 153 bits (329), Expect(3) = 2e-52 Identities = 63/151 (41%), Positives = 99/151 (65%) Frame = -3 / +3 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++ +L YLT +RPDI FA+ F +P H A KRI+RY+ HTL Sbjct: 1989 EAVDQKEYRSMIRSLLYLTASRPDIQFAICLCARFQASPRASHRQAIKRIMRYLNHTLEF 2168 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+AGC DR+ST G F G +LI+WS+RKQ++V++ + E+ Sbjct: 2169 GIWYSTSSSICLSGYSDADFAGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQLTAESE 2348 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSKTPCF 1070 Y A A+ ++++W+ S LK+ G+ K P F Sbjct: 2349 YVAAASCCSQILWLLSTLKDYGLTFDKAPLF 2441 Score = 59.7 bits (124), Expect(3) = 2e-52 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+R KHI+I FHF+ V ++++F+ +K Q+AD F K L + Sbjct: 2439 FCDNTSAINIAKNPVQHSRAKHIDIRFHFLRNHVEKGDVELQFLDTKLQIADIFPKPLDS 2618 Query: 889 QSF 881 F Sbjct: 2619 NRF 2627 Score = 32.7 bits (65), Expect(3) = 2e-52 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -3 / +3 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSS 1559 Q KY DL+++ ++ CKP TP+ S Sbjct: 1881 QTKYTKDLLRRFKMENCKPISTPIGS 1958 Score = 60.6 bits (126), Expect(2) = 4e-12 Identities = 39/107 (36%), Positives = 52/107 (48%) Frame = +3 / -2 Query: 1068 QKQGVLELFIPNSFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIAN 1247 QK+G L P SF +D + A+A Y S ++ T+ CFL DH + P+ Sbjct: 2443 QKRGALSKVRP*SFKVDKSQRICEQQLAAATYSDSAVN*ATLDCFLEDHAINDVPRK*HV 2264 Query: 1248 PPVERLSSRHPAQSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 P V LS PA+S E L +E ++ P SV F YL IRL A Sbjct: 2263 PLVLFLSILQPAKSASEYPLKHIEDEVEYQIPNSSV*FKYLIIRLIA 2123 Score = 31.8 bits (63), Expect(2) = 4e-12 Identities = 18/57 (31%), Positives = 31/57 (54%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL + K + + N + K+K +NVLC+ + + I V ++I+T E Sbjct: 2606 FRENISNLQLCIQKLQLNISLLNMIPQKVKTNINVLCA*VLNRILSNVNSTSIITKE 2436
>LOC_Os10g18860:12010.t01433:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 4226 Score = 177 bits (381), Expect(2) = 2e-52 Identities = 68/131 (51%), Positives = 95/131 (72%) Frame = -3 / +3 Query: 1513 DTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNIGLN 1334 D +YR L GALQYLTLTRP+I++A+ +VC F+H P H KRI+RY+K TL+I L+ Sbjct: 3831 DPMEYRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGTLHICLH 4010 Query: 1333 FSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAGYKA 1154 +P ++A+S++DW GC D R ST G+ +F G NL+SWS+++Q TVSRSS EA Y+A Sbjct: 4011 IGTAPVDSLTAYSDADWVGCPDSRHSTSGYCVFLGENLVSWSSKRQTTVSRSSAEAEYRA 4190 Query: 1153 LANATAEVIWV 1121 +A+A AE W+ Sbjct: 4191 VAHAVAECCWL 4223 Score = 50.1 bits (103), Expect(2) = 2e-52 Identities = 19/44 (43%), Positives = 29/44 (65%) Frame = -3 / +3 Query: 1654 NALHLSQEKYATDLVKKPGLQGCKPTPTPLSSTEKLSLMEGTPI 1523 + L LSQ +YA DL+++ G+ C PT TP+ + KLS +G P+ Sbjct: 3696 DGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSATDGAPV 3827 Score = 91.3 bits (193), Expect(2) = 4e-20 Identities = 55/127 (43%), Positives = 65/127 (51%) Frame = +3 / -2 Query: 1134 SAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPAQSELEKALTS 1313 SA A A+A Y AS LD ETV C L DHE + P+ P VE S P QS E A+ Sbjct: 4210 SATACATARYSASALDRETVVCRLEDHETKFSPRKTQYPDVE*RESGQPTQSASE*AVKE 4031 Query: 1314 VEGDLLKFRPIFSVCFTYLTIRLAAVK*TVVGACKN*HTLFTAKEISGLVSVKY*RAPTR 1493 G + R + V IRL +* G+C N HT A ISG V V+Y*RAP R Sbjct: 4030 STGAVPM*RQMCRVPLM*RKIRLTRAR*GSRGSCINKHTC*IA*AISGRVRVRY*RAPAR 3851 Query: 1494 HLYLVVS 1514 LY + S Sbjct: 3850 LLYSIGS 3830 Score = 28.1 bits (55), Expect(2) = 4e-20 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +3 / -2 Query: 1527 GVPSMRDSFSVLDKGVGVGLQPCRPGFFTKSVAYFS*ER 1643 G PS+ +S GV VG P KS AY *ER Sbjct: 3823 GAPSVAESLHRASTGVAVG*HSDIPARRNKSTAYCH*ER 3707 Score = 36.3 bits (73), Expect = 0.62 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +2 / -1 Query: 1124 PYDFSCGIC*CLVPCLDARSGNSGLFSSRP*NEIRSKKYCKPTC*TSVI*ASCPV*IRKS 1303 P F +C C V RS +SGL P*+++ +++ P C + I + PV IR S Sbjct: 4220 PTTFGNSMCYCTVLSFSTRSRDSGLSLGGP*DQVFTEENTIP*CGMTRIRTTHPVSIRIS 4041 Query: 1304 THKCRRGLAEI*TNI 1348 + +++ TN+ Sbjct: 4040 CQRVNWCSSDVKTNV 3996
>LOC_Os06g07850:12006.t00667:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6152 Score = 145 bits (311), Expect(3) = 3e-52 Identities = 61/147 (41%), Positives = 96/147 (65%) Frame = -3 / +1 Query: 1522 DSVDTTKYRCLVGALQYLTLTRPDISFAVNKVC*FLHAPTTVHFTAAKRIVRYVKHTLNI 1343 ++VD +YR ++G+L YLT +RPDI FAV F +P H A KRI+RY+ HTL Sbjct: 4990 EAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEF 5169 Query: 1342 GLNFSKSPSTLVSAFSNSDWAGCLDDRRSTGGFAIFFGPNLISWSARKQATVSRSSIEAG 1163 G+ +S S S +S +S++D+ G DR+ST G F G +LI+WS+RKQ++V++S+ E+ Sbjct: 5170 GIWYSTSSSICLSGYSDADFGGYRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESE 5349 Query: 1162 YKALANATAEVIWVQSMLKELGIKSSK 1082 Y A A+ ++++W+ S LK+ + K Sbjct: 5350 YVAAASCCSQILWLLSTLKDYSLTLRK 5430 Score = 64.8 bits (135), Expect(3) = 3e-52 Identities = 28/73 (38%), Positives = 45/73 (61%) Frame = -3 / +3 Query: 1069 WCDNVGATYLSANLVFHARTKHIEIDFHFV*ERVANKLLDIRFIHSKDQVADGFTKALRT 890 +CDN A ++ N V H+RTK I+I FHF+ + V ++++F+ +K Q+AD FTK L + Sbjct: 5439 FCDNTSAINIAKNPVQHSRTKQIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDS 5618 Query: 889 QSFEDFKHNLNLI 851 F + L +I Sbjct: 5619 NRFAFLRGELGII 5657 Score = 35.4 bits (71), Expect(3) = 3e-52 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 / +1 Query: 1636 QEKYATDLVKKPGLQGCKPTPTPLSSTEKL 1547 Q KY DL+++ ++ CKP TP+ ST L Sbjct: 4882 QTKYTKDLLRRFKMENCKPISTPIGSTAVL 4971 Score = 51.5 bits (106), Expect(3) = 7e-12 Identities = 34/95 (35%), Positives = 45/95 (47%) Frame = +3 / -1 Query: 1104 SFSMDCTHMTSAVAFASALYPASMLDLETVACFLADHEMRLGPKNIANPPVERLSSRHPA 1283 SF +D + A+A Y S +D T+ CFL DH + P+ P V LS P Sbjct: 5408 SFKVDKSQRICEQQLAAATYSDSAVD*ATLDCFLEDHAINDVPRK*HVPLVLFLSIL*PP 5229 Query: 1284 QSELEKALTSVEGDLLKFRPIFSVCFTYLTIRLAA 1388 +S E L +E ++ P SV F YL IRL A Sbjct: 5228 KSASEYPLKQIEDEVEYQIPNSSV*FKYLIIRLTA 5124 Score = 33.6 bits (67), Expect(3) = 7e-12 Identities = 17/57 (29%), Positives = 32/57 (56%) Frame = +2 / -1 Query: 902 FCKPISNLIF*MNKPNVQEFICNSLSHKMKIYLNVLCSSMKD*IGRQVCGSNIVTPE 1072 F + ISNL F + K + + N + K+K +N+LC+ + + I + ++I+T E Sbjct: 5606 FSENISNLQFRVQKLQLNISLLNMIPQKVKTNINLLCA*VLNRILSNINSTSIITKE 5436 Score = 23.1 bits (44), Expect(3) = 7e-12 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -1 Query: 1437 TAKEISGLVSVKY*RAPTRHLYLVVSTES 1523 TA +SGL +V+Y + P LY ST S Sbjct: 5075 TANCMSGLEAVRYNKDPIILLYSF*STAS 4989 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 722,389,694 Number of extensions: 12628450 Number of successful extensions: 54062 Number of sequences better than 10.0: 1286 Length of query: 563 Length of database: 55,613,886 Length adjustment: 51 Effective length of query: 512 Effective length of database: 52,743,708 Effective search space: 27004778496 Effective search space used: 27004778496 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
