ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf26g16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 97.6 bits (49), Expect = 1e-16 Identities = 142/173 (82%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtccaag 956 ||||| |||||||||||||| || | |||||||||||| |||||||| ||| || | Sbjct: 5442 aaagcctttgtaaacccatcggctatttgatcttttgatccaataaacctaatatcaagc 5383 Query: 957 agtttatttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttcta 1016 | |||||||| ||||| |||| ||||| ||| |||| ||||||||||||||||||| Sbjct: 5382 atcttatttgctactctttctcttacaaagtgataatcaatctcaatgtgctttgttcgt 5323 Query: 1017 gcatgaaagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 |||||||||||| |||| | ||||| ||||| ||||| | |||||||||||| Sbjct: 5322 gcatgaaagactggatttgaggacaaatatgttgctcctaaattgtcacacca 5270
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattggcagac 1040 |||||||||||||| |||||||| |||||||||| ||||||||||||| |||| |||||| Sbjct: 40428 acaaaatgaaaatcaatctcaatatgctttgttcgagcatgaaagactggattcgcagac 40369 Query: 1041 aagtatgtggctccaacattgtcacacca 1069 |||||| | || |||| ||||||||||| Sbjct: 40368 aagtatttcgcaccaatgttgtcacacca 40340
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 97.6 bits (49), Expect = 1e-16 Identities = 142/173 (82%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtccaag 956 ||||| |||||||||||||| || | |||||||||||| |||||||| ||| || | Sbjct: 24723459 aaagcctttgtaaacccatcggctatttgatcttttgatccaataaacctaatatcaagc 24723400 Query: 957 agtttatttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttcta 1016 | |||||||| ||||| |||| ||||| ||| |||| ||||||||||||||||||| Sbjct: 24723399 atcttatttgctactctttctcttacaaagtgataatcaatctcaatgtgctttgttcgt 24723340 Query: 1017 gcatgaaagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 |||||||||||| |||| | ||||| ||||| ||||| | |||||||||||| Sbjct: 24723339 gcatgaaagactggatttgaggacaaatatgttgctcctaaattgtcacacca 24723287 Score = 79.8 bits (40), Expect = 3e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 1191 gtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaaccca 1250 |||||||||||||||||| |||||| | ||||| | |||| |||||| ||||||||| Sbjct: 5979893 gtggcttgttttctagcattccatgacactagatttgagccaacaaatatagcaaaccca 5979952 Query: 1251 cctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcaca 1310 |||||||| | ||||||||||| | ||| ||||| |||| ||||||||| |||| || Sbjct: 5979953 cctgttgaccttctgtcatctatacttccagcccaatctgcattagaaaatccactgacc 5980012 Query: 1311 agtgtaga 1318 |||||||| Sbjct: 5980013 agtgtaga 5980020 Score = 48.1 bits (24), Expect = 0.10 Identities = 51/60 (85%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtcca 954 |||| ||||| |||||||||||||| | ||||| |||| || |||||||||||| |||| Sbjct: 2638947 gtaaggctttggtaaacccatcagccaactgatcatttgtattaataaaccgaatatcca 2638888 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| | | |||| ||||| || ||| | || |||| |||| Sbjct: 5979704 atgtgctttgttcttgcatgaaacattggattagcagataaatattttgcaccaagattg 5979763 Query: 1062 tcacacca 1069 |||||||| Sbjct: 5979764 tcacacca 5979771 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||| ||||| ||||||||||||||||| Sbjct: 28389725 acaaaatgatagtcaacctcaatatgcttagttctagcatgaaagac 28389679 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1262 tctgtcatctaggcatcctgcccagtctg 1290 ||||||||| || |||||||||||||||| Sbjct: 5639007 tctgtcatcaagacatcctgcccagtctg 5638979 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 7390025 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 7389966 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 7389965 gtcagagtcaaatactg 7389949 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| || ||||| |||||||||||||||||| Sbjct: 26004550 aaagccttggtaaaaccatcagcaacttgatct 26004518
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 97.6 bits (49), Expect = 1e-16 Identities = 142/173 (82%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtccaag 956 ||||| |||||||||||||| || | |||||||||||| |||||||| ||| || | Sbjct: 49952 aaagcctttgtaaacccatcggctatttgatcttttgatccaataaacctaatatcaagc 49893 Query: 957 agtttatttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttcta 1016 | |||||||| ||||| |||| ||||| ||| |||| ||||||||||||||||||| Sbjct: 49892 atcttatttgctactctttctcttacaaagtgataatcaatctcaatgtgctttgttcgt 49833 Query: 1017 gcatgaaagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 |||||||||||| |||| | ||||| ||||| ||||| | |||||||||||| Sbjct: 49832 gcatgaaagactggatttgaggacaaatatgttgctcctaaattgtcacacca 49780
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 85.7 bits (43), Expect = 5e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtccaagagttta 962 |||||||| ||||| || | |||||||||||| |||||||| ||| || || | ||| Sbjct: 9857825 tttgtaaatccatcggctatttgatcttttgatccaataaacctaatatcaaacatctta 9857884 Query: 963 tttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatga 1022 ||||| ||||| |||| ||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 9857885 tttgctactctttctcttacaaaatgataatcaatctcaatgtgctttgttcgtgcatga 9857944 Query: 1023 aagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 ||||| |||| | ||||| ||||| || || | |||||||||||| Sbjct: 9857945 aagaccggatttgaggacaaatatgttgcccctaaattgtcacacca 9857991 Score = 48.1 bits (24), Expect = 0.10 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1412 atgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtcaa 1471 ||||||||||| ||| ||||| ||||| ||||| || |||||||| || || | |||| Sbjct: 10028304 atgtaaaaactgacagaccttatttactgcaaatgaaatatcaggcctagtcaaagtcag 10028363 Query: 1472 atactgaagagc 1483 |||||||||||| Sbjct: 10028364 atactgaagagc 10028375 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||||||| |||| | ||| |||||||||||||| |||||||| Sbjct: 17280703 acaaaatgataatcaacctctatgtgctttgttctggcatgaaa 17280660 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||||||||| ||||||||||| ||||| Sbjct: 2474776 acaaaatgatagtcaacctcaatgtgcttagttctagcatggaagac 2474730 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||| ||||||||||||||||| Sbjct: 4913122 gtggaggcgatgccgacgttcgtgctg 4913096 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1430 cttgtttacagcaaaggagatatcagg 1456 |||| |||||||||||||||||||||| Sbjct: 24801276 cttgcttacagcaaaggagatatcagg 24801302 Score = 44.1 bits (22), Expect = 1.6 Identities = 91/114 (79%) Strand = Plus / Minus Query: 1177 tagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaa 1236 ||||||| || || ||||| |||||||||||| |||||| | ||||||| |||| || Sbjct: 17280507 tagatcttgatactgtggcctgttttctagcattccatgacactagattagaaccaataa 17280448 Query: 1237 atattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 | || ||||| |||| ||||| | ||||||||||| || || |||||||||| Sbjct: 17280447 agatagcaaatccactagttgaccttctgtcatctatgctaccagcccagtctg 17280394 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 23436341 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 23436282 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 23436281 gtcagagtcaaatactg 23436265
>dbj|AP005102.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0033J14 Length = 158233 Score = 85.7 bits (43), Expect = 5e-13 Identities = 136/167 (81%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtccaagagttta 962 |||||||| ||||| || | |||||||||||| |||||||| ||| || || | ||| Sbjct: 103865 tttgtaaatccatcggctatttgatcttttgatccaataaacctaatatcaaacatctta 103924 Query: 963 tttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatga 1022 ||||| ||||| |||| ||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 103925 tttgctactctttctcttacaaaatgataatcaatctcaatgtgctttgttcgtgcatga 103984 Query: 1023 aagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 ||||| |||| | ||||| ||||| || || | |||||||||||| Sbjct: 103985 aagaccggatttgaggacaaatatgttgcccctaaattgtcacacca 104031
>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23, complete sequence Length = 173764 Score = 79.8 bits (40), Expect = 3e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 1191 gtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaaccca 1250 |||||||||||||||||| |||||| | ||||| | |||| |||||| ||||||||| Sbjct: 27675 gtggcttgttttctagcattccatgacactagatttgagccaacaaatatagcaaaccca 27734 Query: 1251 cctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcaca 1310 |||||||| | ||||||||||| | ||| ||||| |||| ||||||||| |||| || Sbjct: 27735 cctgttgaccttctgtcatctatacttccagcccaatctgcattagaaaatccactgacc 27794 Query: 1311 agtgtaga 1318 |||||||| Sbjct: 27795 agtgtaga 27802 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| | | |||| ||||| || ||| | || |||| |||| Sbjct: 27486 atgtgctttgttcttgcatgaaacattggattagcagataaatattttgcaccaagattg 27545 Query: 1062 tcacacca 1069 |||||||| Sbjct: 27546 tcacacca 27553
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 79.8 bits (40), Expect = 3e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 1191 gtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaaccca 1250 |||||||||||||||||| |||||| | ||||| | |||| |||||| ||||||||| Sbjct: 117467 gtggcttgttttctagcattccatgacactagatttgagccaacaaatatagcaaaccca 117526 Query: 1251 cctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcaca 1310 |||||||| | ||||||||||| | ||| ||||| |||| ||||||||| |||| || Sbjct: 117527 cctgttgaccttctgtcatctatacttccagcccaatctgcattagaaaatccactgacc 117586 Query: 1311 agtgtaga 1318 |||||||| Sbjct: 117587 agtgtaga 117594 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| | | |||| ||||| || ||| | || |||| |||| Sbjct: 117278 atgtgctttgttcttgcatgaaacattggattagcagataaatattttgcaccaagattg 117337 Query: 1062 tcacacca 1069 |||||||| Sbjct: 117338 tcacacca 117345
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 75.8 bits (38), Expect = 5e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 1199 ttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttga 1258 |||||||||| |||||| | ||||| | ||| ||||| | |||||| ||||||||||| Sbjct: 122407 ttttctagcactccatgataccagatttgatcccaaaaagactgcaaatccacctgttga 122466 Query: 1259 acgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaagtgtaga 1318 | ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||| Sbjct: 122467 tcttctgtcatctactgatcctgcccaatctgcatcagaaaaagcactaacaagagtaga 122526 Query: 1319 ag 1320 || Sbjct: 122527 ag 122528
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 75.8 bits (38), Expect = 5e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 1173 atgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtcca 1232 ||||||||||| || ||||||||||||||||||||| ||| || | ||||| | || Sbjct: 18417025 atgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccc 18417084 Query: 1233 aaaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 | |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 18417085 agaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 18417142 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 15297783 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 15297842 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||| ||||||| || ||||||||||||| Sbjct: 15297843 gaaatattgcaaatcctcctgttgatcttctatcatctaaacagcctgcccagtctg 15297899 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||| ||||||||| ||||| | |||||||||||||| || |||||||| Sbjct: 14216145 tctctcacaaaatggaaatcaacttcaatgtgctttgtccttgcatgaaa 14216096 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 9407133 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 9407192 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 9407193 gtcagagtcaaatactg 9407209
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 75.8 bits (38), Expect = 5e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 1199 ttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttga 1258 |||||||||| |||||| | ||||| | ||| ||||| | |||||| ||||||||||| Sbjct: 24663690 ttttctagcactccatgataccagatttgatcccaaaaagactgcaaatccacctgttga 24663749 Query: 1259 acgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaagtgtaga 1318 | ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||| Sbjct: 24663750 tcttctgtcatctactgatcctgcccaatctgcatcagaaaaagcactaacaagagtaga 24663809 Query: 1319 ag 1320 || Sbjct: 24663810 ag 24663811 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 |||||||| |||||||| || ||||||||||| |||| || |||||||||||| ||||| Sbjct: 20147992 gttgaacgcctgtcatccagacatcctgcccaatctgcatcagaaaaagcactaacaag 20148050 Score = 61.9 bits (31), Expect = 7e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1399 ctgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtc 1458 |||| ||||| ||||||||| ||| ||| ||||||||||| | ||| || ||||| |||| Sbjct: 32251910 ctgtagttggagcatgtaaatactgacataccttgtttactgaaaatgatatatccggtc 32251969 Query: 1459 ttgtaagtgtcaaatactg 1477 |||| | |||||||||||| Sbjct: 32251970 ttgtcaatgtcaaatactg 32251988 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 1005 tgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtca 1064 |||||||||||||||||||| ||| ||| || ||||||||| ||||||||| ||| ||| Sbjct: 28420278 tgctttgttctagcatgaaaaactgaatttgctgacaagtatttggctccaagattatca 28420219 Query: 1065 ca 1066 || Sbjct: 28420218 ca 28420217 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Plus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 34880855 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 34880914 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 34880915 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 34880973 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatc 928 |||||||||| |||||||||||||| |||||||| Sbjct: 17393417 gtaaagctttagtaaacccatcagctacttgatc 17393384 Score = 48.1 bits (24), Expect = 0.10 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1412 atgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtcaa 1471 ||||||||||| ||| ||||| ||||| ||||| || |||||||| || || | |||| Sbjct: 35994351 atgtaaaaactgacagaccttatttactgcaaatgaaatatcaggcctagtcaaagtcag 35994410 Query: 1472 atactgaagagc 1483 |||||||||||| Sbjct: 35994411 atactgaagagc 35994422 Score = 46.1 bits (23), Expect = 0.41 Identities = 95/119 (79%) Strand = Plus / Plus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 11281782 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 11281841 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||| | |||| || |||||| |||| ||||| Sbjct: 11281842 gttgatcttctgtcatctggagatcctgcctaatctgcatctgaaaaaccactaacaag 11281900 Score = 46.1 bits (23), Expect = 0.41 Identities = 68/83 (81%) Strand = Plus / Minus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgcta 1178 |||||||| || | ||||||||| ||||| |||| |||||||| ||||||| | || Sbjct: 17393193 tgcacccacataatttcagctgtagcattagctaaagccttgtattctgcctctgtactt 17393134 Query: 1179 gatctggaaacagtggcttgttt 1201 || || ||||||||||||||||| Sbjct: 17393133 gaccttgaaacagtggcttgttt 17393111 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 822 tgtttaacacccttccttaatcacaacttt 851 ||||||||||||| ||||||||| |||||| Sbjct: 3276232 tgtttaacaccctcccttaatcataacttt 3276203 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 3276157 aaagcctttgtaaaaccatctgcaacttgatct 3276125 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| || ||||| |||||||||||||||||| Sbjct: 7807552 aaagccttagtaaagccatcagcaacttgatct 7807520 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 11281487 agcttttgtaaaaccatctgcaacctgatcttt 11281519 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttt 931 |||||||| ||||| |||||||||||||| Sbjct: 15602861 tttgtaaagccatctgcaacttgatcttt 15602889 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1188 acagtggcttgttttctagca 1208 ||||||||||||||||||||| Sbjct: 28420095 acagtggcttgttttctagca 28420075 Score = 42.1 bits (21), Expect = 6.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||||||| |||| | ||| || ||||||||||| |||||||| ||| |||| Sbjct: 32251492 acaaaatgataatccacctctatatgctttgttctggcatgaaaaactggatt 32251544 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 34880560 agcttttgtaaaaccatctgcaacctgatcttt 34880592
>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183327 Score = 75.8 bits (38), Expect = 5e-10 Identities = 101/122 (82%) Strand = Plus / Plus Query: 1199 ttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttga 1258 |||||||||| |||||| | ||||| | ||| ||||| | |||||| ||||||||||| Sbjct: 42379 ttttctagcactccatgataccagatttgatcccaaaaagactgcaaatccacctgttga 42438 Query: 1259 acgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaagtgtaga 1318 | ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||| Sbjct: 42439 tcttctgtcatctactgatcctgcccaatctgcatcagaaaaagcactaacaagagtaga 42498 Query: 1319 ag 1320 || Sbjct: 42499 ag 42500
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 75.8 bits (38), Expect = 5e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 1173 atgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtcca 1232 ||||||||||| || ||||||||||||||||||||| ||| || | ||||| | || Sbjct: 68924 atgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccc 68983 Query: 1233 aaaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 | |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 68984 agaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 69041
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 98064 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 98123 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 98124 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 98180
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 4126402 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 4126461 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 4126462 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 4126518 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1437 acagcaaaggagatatcaggtcttgta 1463 |||||| |||||||||||||||||||| Sbjct: 26894715 acagcataggagatatcaggtcttgta 26894689 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 996 atctcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctcca 1055 ||||| ||||| |||||||||||||| ||||| |||||| || | ||| || ||||| Sbjct: 20015423 atctctatgtgttttgttctagcatggaagaccggattggatgataggtaggttgctcct 20015482 Query: 1056 acattgtcacacca 1069 | |||||||||||| Sbjct: 20015483 aaattgtcacacca 20015496 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1050 gctccaacattgtcacaccaga 1071 |||||||||||||||||||||| Sbjct: 26974099 gctccaacattgtcacaccaga 26974120
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 7403808 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 7403749 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 7403748 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 7403692 Score = 69.9 bits (35), Expect = 3e-08 Identities = 131/163 (80%) Strand = Plus / Plus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 23094268 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 23094327 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| | |||| || || ||||| Sbjct: 23094328 actgtagcttgttttcttgcactccatgatattaaattggaaccaaggaaaatagcaaaa 23094387 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 23094388 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 23094430 Score = 61.9 bits (31), Expect = 7e-06 Identities = 130/163 (79%) Strand = Plus / Minus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 7484829 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 7484770 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| |||| || || ||||| Sbjct: 7484769 actgtagcttgttttcttgcactccatgatattaaattgaaaccaaggaaaatagcaaaa 7484710 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 7484709 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 7484667 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtc 1469 ||||||||| ||| ||| ||||||||||| | ||| || ||||| |||||||| | |||| Sbjct: 21666500 gcatgtaaatactgacataccttgtttactgaaaatgatatatctggtcttgttaatgtc 21666441 Query: 1470 aaatactg 1477 |||||||| Sbjct: 21666440 aaatactg 21666433 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 999 tcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaaca 1058 ||||| |||||||||||||||||||| ||| | || ||||| | || ||||||||| | Sbjct: 28503170 tcaatatgctttgttctagcatgaaacactgggtttgcagaaagatacttggctccaaga 28503111 Query: 1059 ttgtcacacca 1069 ||||||||||| Sbjct: 28503110 ttgtcacacca 28503100 Score = 50.1 bits (25), Expect = 0.026 Identities = 73/89 (82%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattggcagac 1040 ||||||||| |||| | ||| || ||||||||||| |||||||| ||| |||| || | Sbjct: 21666929 acaaaatgataatccacctctatatgctttgttctggcatgaaaaactggatttgctgtt 21666870 Query: 1041 aagtatgtggctccaacattgtcacacca 1069 |||||| | ||||||| ||| |||||||| Sbjct: 21666869 aagtatttagctccaatattatcacacca 21666841 Score = 50.1 bits (25), Expect = 0.026 Identities = 91/112 (81%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 960 ttatttgcaactctctctc--acacaaaatgaaaatctatctcaatgtgctttgttctag 1017 |||||||| |||||||||| | ||||| ||| || | |||||||| ||||| |||| | Sbjct: 23255823 ttatttgctactctctctcttatacaaagtgataaccaatctcaatatgcttcgttcgtg 23255882 Query: 1018 catgaaagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 ||||||||||| |||| | || || ||||| ||||| | |||||||||||| Sbjct: 23255883 catgaaagactggatttgatgataaatatgttgctcctaaattgtcacacca 23255934 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1467 gtcaaatactgaagagcacctaccagacatctgtatttagta 1508 ||||||||||| ||||| || |||| || ||||||||||||| Sbjct: 9923417 gtcaaatactgcagagctccaaccaaacttctgtatttagta 9923458
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 9151973 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 9151914 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 9151913 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 9151857 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| |||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 31665 ctctctcacaaaatgataatcaatctcaatgtgctttgtccttgcatgaaagactggatt 31606 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||| Sbjct: 24388877 acaaaatgaaaatctatctcaatgtacttggttcttgcatgaaacactggatt 24388825 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 965 tgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||||||| ||||| |||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 27301557 tgcaactcgctctcgcacaaaatgaaagtctatctcaatatgtttggttcttgcatgaaa 27301616 Score = 60.0 bits (30), Expect = 3e-05 Identities = 111/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 |||||||| |||||||||| ||||||||||||| ||| ||||| | |||| ||||| | Sbjct: 18176356 ctagatctagaaacagtgggttgttttctagcactccaagaaatcaaattacttccaaga 18176297 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 || | ||||| || ||||| || | |||||||| ||||||||||||| |||| || | Sbjct: 18176296 aacacagcaaatcctcctgtagat--tttgtcatctgggcatcctgcccaatctgcatca 18176239 Query: 1296 gaaaaagcactcacaag 1312 || |||||||| ||||| Sbjct: 18176238 gagaaagcacttacaag 18176222 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1395 tgaactgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatca 1454 |||||||| || || ||||||||||||| ||||||||| || || | |||||||||||| Sbjct: 26198360 tgaactgtagtaggagcatgtaaaaactgacacaccttattcactgagaaggagatatca 26198419 Query: 1455 ggtct 1459 ||||| Sbjct: 26198420 ggtct 26198424 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1242 gcaaacccacctgttgaacgtctgtcatctaggcatcctgccca 1285 ||||| ||||| || |||||||||||||||| |||||||||||| Sbjct: 24388616 gcaaagccaccagtggaacgtctgtcatctaagcatcctgccca 24388573 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 1262 tctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaagtgtagaag 1320 ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||||| Sbjct: 464923 tctgtcatctacagatcctgcccaatctgcatcagaaaaagcactaacaagagtagaag 464865 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 1242 gcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaa 1301 ||||| || |||||||| | |||||||||||| ||||||||||| |||| || || ||| Sbjct: 27313244 gcaaaacctcctgttgatcttctgtcatctagacatcctgcccaatctgtatcggagaaa 27313303 Query: 1302 gcactcacaag 1312 ||||| ||||| Sbjct: 27313304 gcactgacaag 27313314 Score = 46.1 bits (23), Expect = 0.41 Identities = 50/59 (84%) Strand = Plus / Minus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||||||||||| ||||||||| |||| | || || || ||||||||||||||||| Sbjct: 465217 gcaactctctctcttacaaaatgataatcaacttctatatgttttgttctagcatgaaa 465159 Score = 46.1 bits (23), Expect = 0.41 Identities = 95/119 (79%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 13928876 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 13928817 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||| | | |||||||||| |||| || |||||| |||| ||||| Sbjct: 13928816 gttgatcttctgtcatatggagatcctgcccaatctgcatctgaaaaaccactaacaag 13928758 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtct 1459 ||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||| Sbjct: 464775 gcatgtaaaaactgacagaccttatttactgcaaaagaaatatctggtct 464726 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 13929171 agcttttgtaaaaccatctgcaacctgatcttt 13929139 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttttgaa 935 |||||||| ||||| ||||||||||||| |||| Sbjct: 19092966 tttgtaaatccatccgcaacttgatcttctgaa 19092998
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 110393 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 110334 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 110333 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 110277
>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026F09 Length = 124371 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 54736 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 54677 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 54676 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 54620
>dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0049K19 Length = 131932 Score = 73.8 bits (37), Expect = 2e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 11691 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 11632 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 11631 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 11575
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| |||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 15354038 ctctctcacaaaatgataatcaatctcaatgtgctttgtccttgcatgaaagactggatt 15353979 Score = 48.1 bits (24), Expect = 0.10 Identities = 84/104 (80%) Strand = Plus / Plus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaag 1025 ||||||||||||| | ||||||| |||| | || || ||||||||||| |||||||| Sbjct: 5905368 gcaactctctctcttaaaaaatgataatcaacttctatatgctttgttctggcatgaaac 5905427 Query: 1026 actagattggcagacaagtatgtggctccaacattgtcacacca 1069 || ||||| | ||||| ||||| ||||| | ||||||||||| Sbjct: 5905428 acatgattgactgacaaatatgtagctcctaagttgtcacacca 5905471
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| |||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 71401 ctctctcacaaaatgataatcaatctcaatgtgctttgtccttgcatgaaagactggatt 71342
>dbj|AP006851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa183H18 Length = 38313 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| |||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 31665 ctctctcacaaaatgataatcaatctcaatgtgctttgtccttgcatgaaagactggatt 31606
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 71.9 bits (36), Expect = 7e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| |||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 26274 ctctctcacaaaatgataatcaatctcaatgtgctttgtccttgcatgaaagactggatt 26215
>ref|NM_001069544.1| Oryza sativa (japonica cultivar-group) Os09g0368000 (Os09g0368000) mRNA, complete cds Length = 3306 Score = 69.9 bits (35), Expect = 3e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 |||||||||||||| || ||||| ||||| ||| ||| |||| ||||| | || ||| Sbjct: 2951 ctagatctggaaactgtagcttgctttctggcactccaggaaaccagatttgaccccaaa 2892 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 ||||||||||| || |||||||| | ||||||||| |||| || |||||||||| || | Sbjct: 2891 aatattgcaaagcctcctgttgaccttctgtcatccaggctaccagcccagtctgcatca 2832 Query: 1296 gaaaaagcactcacaagtgtaga 1318 ||||| |||| ||||| ||||| Sbjct: 2831 gaaaacccactaacaagagtaga 2809 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1008 tttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtcacac 1067 |||||||| |||||||| ||| |||| || |||| ||| | ||||||| |||||||||| Sbjct: 3119 tttgttctggcatgaaacactggatttgctgacatatatttagctccaagattgtcacac 3060 Query: 1068 ca 1069 || Sbjct: 3059 ca 3058
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 69.9 bits (35), Expect = 3e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 |||||||||||||| || ||||| ||||| ||| ||| |||| ||||| | || ||| Sbjct: 12083312 ctagatctggaaactgtagcttgctttctggcactccaggaaaccagatttgaccccaaa 12083253 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 ||||||||||| || |||||||| | ||||||||| |||| || |||||||||| || | Sbjct: 12083252 aatattgcaaagcctcctgttgaccttctgtcatccaggctaccagcccagtctgcatca 12083193 Query: 1296 gaaaaagcactcacaagtgtaga 1318 ||||| |||| ||||| ||||| Sbjct: 12083192 gaaaacccactaacaagagtaga 12083170 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 1241 tgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaa 1300 |||||| |||| |||||| | ||||||||||| |||||||||| |||| || |||||| Sbjct: 13208163 tgcaaatccacttgttgaccttctgtcatctactgatcctgcccaatctgcatcagaaaa 13208104 Query: 1301 agcactcacaagtgtagaagg 1321 |||||| ||||| |||||||| Sbjct: 13208103 agcactaacaagagtagaagg 13208083 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||| | ||| || | ||||| | || | Sbjct: 22063528 tgctagatctagacacagtggcttgttttctagtattccaggagaccagatttgaaccca 22063469 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 22063468 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 22063412 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||||||||||||||||||||| Sbjct: 21934258 gtggaggcgctgccgacgttcgtgctg 21934284 Score = 52.0 bits (26), Expect = 0.007 Identities = 137/174 (78%) Strand = Plus / Minus Query: 1138 ctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaaacagtggctt 1197 |||| |||||||| ||||| ||||| | ||||| ||||||| ||||| ||||| |||| Sbjct: 8020319 ctgttgcatttgccagtgctttgtattcagcctccgtgctagacctggacacagttgctt 8020260 Query: 1198 gttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttg 1257 ||||||| ||| |||||| | || |||| |||| | | | |||||| || || || | Sbjct: 8020259 gttttcttgcactccatgacacaaggttagagccaagataaactgcaaaacctccagtag 8020200 Query: 1258 aacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 | || ||||||||||| ||||| ||||| |||| ||| | ||||||||| |||| Sbjct: 8020199 accgcctgtcatctagacatccagcccaatctgcatttgtaaaagcactaacaa 8020146 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1008 tttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtcacac 1067 |||||||| |||||||| ||| |||| || |||| ||| | ||||||| |||||||||| Sbjct: 12083480 tttgttctggcatgaaacactggatttgctgacatatatttagctccaagattgtcacac 12083421 Query: 1068 ca 1069 || Sbjct: 12083420 ca 12083419 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 902 ttttgtaaacccatcagcaacttgatcttttgaa 935 ||||||||| ||||| ||||||||||||| |||| Sbjct: 16346608 ttttgtaaatccatctgcaacttgatcttgtgaa 16346575 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1008 tttgttctagcatgaaagactagatt 1033 ||||||||||||||||| |||||||| Sbjct: 17434279 tttgttctagcatgaaacactagatt 17434304 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1449 atatcaggtcttgtaagtgtcaaatactg 1477 |||||||||||||| ||||| |||||||| Sbjct: 4403612 atatcaggtcttgtcagtgttaaatactg 4403584 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 983 aaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||| | |||| ||| || ||||| ||||||||||||||||| Sbjct: 13208421 aaaatgatagtctacctctatatgcttagttctagcatgaaagac 13208377
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 69.9 bits (35), Expect = 3e-08 Identities = 131/163 (80%) Strand = Plus / Plus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 44916 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 44975 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| | |||| || || ||||| Sbjct: 44976 actgtagcttgttttcttgcactccatgatattaaattggaaccaaggaaaatagcaaaa 45035 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 45036 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 45078
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 69.9 bits (35), Expect = 3e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 |||||||||||||| || ||||| ||||| ||| ||| |||| ||||| | || ||| Sbjct: 17691 ctagatctggaaactgtagcttgctttctggcactccaggaaaccagatttgaccccaaa 17632 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 ||||||||||| || |||||||| | ||||||||| |||| || |||||||||| || | Sbjct: 17631 aatattgcaaagcctcctgttgaccttctgtcatccaggctaccagcccagtctgcatca 17572 Query: 1296 gaaaaagcactcacaagtgtaga 1318 ||||| |||| ||||| ||||| Sbjct: 17571 gaaaacccactaacaagagtaga 17549 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1008 tttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtcacac 1067 |||||||| |||||||| ||| |||| || |||| ||| | ||||||| |||||||||| Sbjct: 17859 tttgttctggcatgaaacactggatttgctgacatatatttagctccaagattgtcacac 17800 Query: 1068 ca 1069 || Sbjct: 17799 ca 17798
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 |||||| |||||||| ||||| |||||||| |||||||||||||||||| |||| Sbjct: 16376456 cacaaagtgaaaatcaatctctatgtgcttagttctagcatgaaagactggatt 16376509 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 1263 ctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 ||||||||||| |||||||||||||||| || ||| |||||||| |||| Sbjct: 31231716 ctgtcatctagacatcctgcccagtctgcatcagagaaagcactaacaa 31231668 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatc 928 |||||||||| |||||||||||||| |||||||| Sbjct: 24775404 gtaaagctttagtaaacccatcagctacttgatc 24775371 Score = 50.1 bits (25), Expect = 0.026 Identities = 109/137 (79%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 ||||||||||| ||||||||||| |||| ||| |||||| || ||||| ||||| | | Sbjct: 12396573 ctagatctggatacagtggcttgctttcgcgcactccatgacataagattgggtcctata 12396514 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 || | ||||| || || || ||||| || ||||| || ||||||||| | |||| || | Sbjct: 12396513 aacacagcaaaacctccagtggaacgcctatcatccagacatcctgcctaatctgcatca 12396454 Query: 1296 gaaaaagcactcacaag 1312 || |||||||| ||||| Sbjct: 12396453 gagaaagcactaacaag 12396437 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1430 cttgtttacagcaaaggagatatcagg 1456 |||| |||||||||||||||||||||| Sbjct: 2506389 cttgcttacagcaaaggagatatcagg 2506415 Score = 46.1 bits (23), Expect = 0.41 Identities = 59/71 (83%) Strand = Plus / Minus Query: 999 tcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaaca 1058 ||||| |||||||||||||||||||| ||| | || | ||||| ||||| || |||| | Sbjct: 5964824 tcaatatgctttgttctagcatgaaacactgggttaactgacaaatatgttgccccaata 5964765 Query: 1059 ttgtcacacca 1069 || |||||||| Sbjct: 5964764 ttatcacacca 5964754 Score = 46.1 bits (23), Expect = 0.41 Identities = 68/83 (81%) Strand = Plus / Minus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgcta 1178 |||||||| || | ||||||||| ||||| |||| |||||||| ||||||| | || Sbjct: 24775180 tgcacccacataatttcagctgtagcattagctaaagccttgtattctgcctctgtactt 24775121 Query: 1179 gatctggaaacagtggcttgttt 1201 || || ||||||||||||||||| Sbjct: 24775120 gaccttgaaacagtggcttgttt 24775098 Score = 44.1 bits (22), Expect = 1.6 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1241 tgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaa 1300 |||||| || |||||||| | ||| ||||||| ||||||||||| || | | ||||||| Sbjct: 16376719 tgcaaaacctcctgttgatcttctatcatctacacatcctgcccaatcagcactagaaaa 16376778 Query: 1301 agcact 1306 |||||| Sbjct: 16376779 agcact 16376784 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 37125974 aaagcctttgtaaaaccatctgcaacttgatct 37125942
>dbj|AP006237.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008D07 Length = 156874 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 |||||| |||||||| ||||| |||||||| |||||||||||||||||| |||| Sbjct: 138533 cacaaagtgaaaatcaatctctatgtgcttagttctagcatgaaagactggatt 138586 Score = 44.1 bits (22), Expect = 1.6 Identities = 55/66 (83%) Strand = Plus / Plus Query: 1241 tgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaa 1300 |||||| || |||||||| | ||| ||||||| ||||||||||| || | | ||||||| Sbjct: 138796 tgcaaaacctcctgttgatcttctatcatctacacatcctgcccaatcagcactagaaaa 138855 Query: 1301 agcact 1306 |||||| Sbjct: 138856 agcact 138861
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| | | || | ||||| | || | Sbjct: 26634484 tgctagatctagacacagtggcttgttttctagcattctaggagaccagatttgaaccca 26634543 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 26634544 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 26634600 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| ||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 10670729 ctctctcacaaaatgataataaatctcaatgtgctttgtccttgcatgaaagactggatt 10670670 Score = 61.9 bits (31), Expect = 7e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattg 1034 |||| |||||| |||||||||||||| || || || || || |||||||||||| |||| Sbjct: 11023427 tctctcacaaagtgaaaatctatctctatatgtttagtccttgcatgaaagactggatta 11023368 Query: 1035 gcagacaagtatgtggctccaacattgtcacacca 1069 ||||||| || ||||| |||| ||| |||||||| Sbjct: 11023367 gcagacagataggtggcaccaagattatcacacca 11023333 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Minus Query: 1124 ccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatct 1183 |||||| || ||||| ||||||||||| |||||||||||| | ||||| ||||||| || Sbjct: 11023278 ccatattacctcagccgtggcatttgcaagtgccttgtactcagcctctgtgctagacct 11023219 Query: 1184 ggaaacagtggcttgttttct 1204 || || || ||||||||||| Sbjct: 11023218 agacaccgtcgcttgttttct 11023198 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1263 ctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 ||||||||||| |||||||||||||||| || ||| |||||||| |||| Sbjct: 25936981 ctgtcatctagacatcctgcccagtctgcatcagagaaagcactaacaa 25937029 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 1230 ccaaaaaatattgcaaacccacctgttgaacgtctgtcatcta 1272 |||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 15321840 ccaataaatatagcaaacccacctgttgaccttctgtcatcta 15321798 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 27252202 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 27252143 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 27252142 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 27252084 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| ||| |||| |||| || ||| | || |||| |||| Sbjct: 15322070 atgtgctttgttcttgcatgaaacactggattaacagataaatattttgcaccaagattg 15322011 Query: 1062 tcacacca 1069 |||||||| Sbjct: 15322010 tcacacca 15322003 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 ||||| ||||||||||||||||| || |||| || ||||| || || ||||||| ||| Sbjct: 25936720 atgtgttttgttctagcatgaaacacaggatttgctgacaaataggtagctccaatatta 25936779 Query: 1062 tcacacca 1069 |||||||| Sbjct: 25936780 tcacacca 25936787 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 27252497 agcttttgtaaaaccatctgcaacctgatcttt 27252465
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| | | || | ||||| | || | Sbjct: 46011 tgctagatctagacacagtggcttgttttctagcattctaggagaccagatttgaaccca 46070 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 46071 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 46127
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||| | ||| || | ||||| | || | Sbjct: 105592 tgctagatctagacacagtggcttgttttctagtattccaggagaccagatttgaaccca 105533 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 105532 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 105476
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 1241 tgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaa 1300 |||||| |||| |||||| | ||||||||||| |||||||||| |||| || |||||| Sbjct: 29597 tgcaaatccacttgttgaccttctgtcatctactgatcctgcccaatctgcatcagaaaa 29538 Query: 1301 agcactcacaagtgtagaagg 1321 |||||| ||||| |||||||| Sbjct: 29537 agcactaacaagagtagaagg 29517 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 983 aaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||| | |||| ||| || ||||| ||||||||||||||||| Sbjct: 29855 aaaatgatagtctacctctatatgcttagttctagcatgaaagac 29811
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 65.9 bits (33), Expect = 4e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 1241 tgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaa 1300 |||||| |||| |||||| | ||||||||||| |||||||||| |||| || |||||| Sbjct: 130253 tgcaaatccacttgttgaccttctgtcatctactgatcctgcccaatctgcatcagaaaa 130194 Query: 1301 agcactcacaagtgtagaagg 1321 |||||| ||||| |||||||| Sbjct: 130193 agcactaacaagagtagaagg 130173 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 983 aaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||| | |||| ||| || ||||| ||||||||||||||||| Sbjct: 130511 aaaatgatagtctacctctatatgcttagttctagcatgaaagac 130467
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||||||||||||||||||||||| ||| ||||| |||||||| ||| |||| Sbjct: 17083 acaaaatgaaaatctatctcaatgtacttggttcttgcatgaaacactggatt 17031 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 1242 gcaaacccacctgttgaacgtctgtcatctaggcatcctgccca 1285 ||||| ||||| || |||||||||||||||| |||||||||||| Sbjct: 16822 gcaaagccaccagtggaacgtctgtcatctaagcatcctgccca 16779
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| | | || | ||||| | || | Sbjct: 183351 tgctagatctagacacagtggcttgttttctagcattctaggagaccagatttgaaccca 183410 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||||||||||| || ||||||||||||| Sbjct: 183411 gaaatattgcaaatcctcctgttgatcttctgtcatctaaacagcctgcccagtctg 183467
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151541 Score = 65.9 bits (33), Expect = 4e-07 Identities = 96/117 (82%) Strand = Plus / Plus Query: 1174 tgctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaa 1233 |||||||||| || ||||||||||||||||||||| ||| || | ||||| | || | Sbjct: 73176 tgctagatctagacacagtggcttgttttctagcattccaggagaccagatttgaaccca 73235 Query: 1234 aaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 |||||||||||| || |||||||| | ||| ||||||| || ||||||||||||| Sbjct: 73236 gaaatattgcaaatcctcctgttgatcttctatcatctaaacagcctgcccagtctg 73292
>gb|DQ106619.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wolfe Barley Dominant clone 6 genomic sequence corresponding to Ds insertion site in TNP-93 Length = 506 Score = 63.9 bits (32), Expect = 2e-06 Identities = 38/40 (95%) Strand = Plus / Minus Query: 1030 gattggcagacaagtatgtggctccaacattgtcacacca 1069 |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 358 gattggcagataagtatgtggcgccaacattgtcacacca 319
>emb|AJ416708.1|PDE416708 Populus deltoides MER locus, genomic DNA, cultivar S9-2 Length = 95055 Score = 63.9 bits (32), Expect = 2e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 968 aactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 |||||| |||| ||||||||| |||| | ||||| || ||||| | |||||||||||| Sbjct: 41675 aactctatctcggacaaaatgataatcgacctcaacatgttttgtgcgagcatgaaagac 41616 Query: 1028 tagattggcagacaagtatgtggctccaacattgtcacaccaga 1071 |||| |||||||| || ||||| |||| |||||||||||||| Sbjct: 41615 aggattcgcagacaaataggtggcaccaagattgtcacaccaga 41572
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Plus Query: 965 tgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||||||| ||||| |||||||||||| ||||||||||| || || ||||| |||||||| Sbjct: 16490 tgcaactcgctctcgcacaaaatgaaagtctatctcaatatgtttggttcttgcatgaaa 16549 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 1242 gcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaa 1301 ||||| || |||||||| | |||||||||||| ||||||||||| |||| || || ||| Sbjct: 28177 gcaaaacctcctgttgatcttctgtcatctagacatcctgcccaatctgtatcggagaaa 28236 Query: 1302 gcactcacaag 1312 ||||| ||||| Sbjct: 28237 gcactgacaag 28247
>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_F05 Length = 134247 Score = 63.9 bits (32), Expect = 2e-06 Identities = 53/60 (88%) Strand = Plus / Minus Query: 974 ctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||| ||| ||||||||||||||||| || |||||||||||| |||| Sbjct: 98369 ctctctcacaaaatgataataaatctcaatgtgctttgtccttgcatgaaagactggatt 98310
>gb|AC016781.6| Oryza sativa (japonica cultivar-group) clone OSJNBa0084C09, complete sequence Length = 151269 Score = 61.9 bits (31), Expect = 7e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 |||||||| |||||||| || ||||||||||| |||| || |||||||||||| ||||| Sbjct: 73049 gttgaacgcctgtcatccagacatcctgcccaatctgcatcagaaaaagcactaacaag 73107
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 61.9 bits (31), Expect = 7e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1399 ctgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtc 1458 |||| ||||| ||||||||| ||| ||| ||||||||||| | ||| || ||||| |||| Sbjct: 162523 ctgtagttggagcatgtaaatactgacataccttgtttactgaaaatgatatatccggtc 162582 Query: 1459 ttgtaagtgtcaaatactg 1477 |||| | |||||||||||| Sbjct: 162583 ttgtcaatgtcaaatactg 162601 Score = 42.1 bits (21), Expect = 6.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||||||| |||| | ||| || ||||||||||| |||||||| ||| |||| Sbjct: 162105 acaaaatgataatccacctctatatgctttgttctggcatgaaaaactggatt 162157
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 61.9 bits (31), Expect = 7e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattggcagac 1040 ||||| |||||||| || ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 1635231 acaaagtgaaaatcaatttcaatatgtttggttctggcatgaaaaacaggattggcagac 1635290 Query: 1041 aagtatgtggctccaacattgtcacaccagaaaca 1075 || || ||||||||| ||| |||||||| ||||| Sbjct: 1635291 aaatacttggctccaagattatcacaccataaaca 1635325 Score = 61.9 bits (31), Expect = 7e-06 Identities = 130/163 (79%) Strand = Plus / Plus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 25847772 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 25847831 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| |||| || || ||||| Sbjct: 25847832 actgtagcttgttttcttgcactccatgatattaaattgaaaccaaggaaaatagcaaaa 25847891 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 25847892 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 25847934 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatct 929 ||||||||||||| ||||||||||||| Sbjct: 29659684 tttgtaaacccattagcaacttgatct 29659710 Score = 42.1 bits (21), Expect = 6.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 906 gtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtcca 954 |||||||||||||| | ||||| |||| || |||||||||||| |||| Sbjct: 1635156 gtaaacccatcagccaactgatcatttgtattaataaaccgaatatcca 1635204
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 61.9 bits (31), Expect = 7e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1399 ctgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtc 1458 |||| ||||| ||||||||| ||| ||| ||||||||||| | ||| || ||||| |||| Sbjct: 13072 ctgtagttggagcatgtaaatactgacataccttgtttactgaaaatgatatatccggtc 13131 Query: 1459 ttgtaagtgtcaaatactg 1477 |||| | |||||||||||| Sbjct: 13132 ttgtcaatgtcaaatactg 13150 Score = 42.1 bits (21), Expect = 6.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagatt 1033 ||||||||| |||| | ||| || ||||||||||| |||||||| ||| |||| Sbjct: 12654 acaaaatgataatccacctctatatgctttgttctggcatgaaaaactggatt 12706
>emb|BX842607.1|OSJN00296 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1248C03, complete sequence Length = 141099 Score = 61.9 bits (31), Expect = 7e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattggcagac 1040 ||||| |||||||| || ||||| || || ||||| |||||||| || ||||||||||| Sbjct: 72513 acaaagtgaaaatcaatttcaatatgtttggttctggcatgaaaaacaggattggcagac 72572 Query: 1041 aagtatgtggctccaacattgtcacaccagaaaca 1075 || || ||||||||| ||| |||||||| ||||| Sbjct: 72573 aaatacttggctccaagattatcacaccataaaca 72607 Score = 42.1 bits (21), Expect = 6.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 906 gtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtcca 954 |||||||||||||| | ||||| |||| || |||||||||||| |||| Sbjct: 72438 gtaaacccatcagccaactgatcatttgtattaataaaccgaatatcca 72486
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 61.9 bits (31), Expect = 7e-06 Identities = 130/163 (79%) Strand = Plus / Plus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 65182 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 65241 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| |||| || || ||||| Sbjct: 65242 actgtagcttgttttcttgcactccatgatattaaattgaaaccaaggaaaatagcaaaa 65301 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 65302 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 65344
>dbj|AP004725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0412C04 Length = 146849 Score = 61.9 bits (31), Expect = 7e-06 Identities = 130/163 (79%) Strand = Plus / Minus Query: 1128 atgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaa 1187 ||||||||||| || ||||| |||| |||||||||| |||| || ||||||| | |||| Sbjct: 44760 atgacttcagcagtagcattagctaatgccttgtactctgcttctgtgctagagcgggaa 44701 Query: 1188 acagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaac 1247 || || ||||||||||| ||| |||||| || | ||| |||| || || ||||| Sbjct: 44700 actgtagcttgttttcttgcactccatgatattaaattgaaaccaaggaaaatagcaaaa 44641 Query: 1248 ccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 ||||| ||||||||||| |||||| ||||||||||| |||| Sbjct: 44640 ccaccagttgaacgtctatcatctgaacatcctgcccaatctg 44598
>dbj|AP003936.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_E05 Length = 137352 Score = 61.9 bits (31), Expect = 7e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattg 1034 |||| |||||| |||||||||||||| || || || || || |||||||||||| |||| Sbjct: 117154 tctctcacaaagtgaaaatctatctctatatgtttagtccttgcatgaaagactggatta 117095 Query: 1035 gcagacaagtatgtggctccaacattgtcacacca 1069 ||||||| || ||||| |||| ||| |||||||| Sbjct: 117094 gcagacagataggtggcaccaagattatcacacca 117060 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Minus Query: 1124 ccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagatct 1183 |||||| || ||||| ||||||||||| |||||||||||| | ||||| ||||||| || Sbjct: 117005 ccatattacctcagccgtggcatttgcaagtgccttgtactcagcctctgtgctagacct 116946 Query: 1184 ggaaacagtggcttgttttct 1204 || || || ||||||||||| Sbjct: 116945 agacaccgtcgcttgttttct 116925
>gb|DQ244469.1| Zea mays clone 7956 mRNA sequence Length = 747 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 2 acacgagctcacgccgtgaaagcaaggcagcatg 35 |||||||||||||| ||||||||||||||||||| Sbjct: 1 acacgagctcacgcagtgaaagcaaggcagcatg 34 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Plus Query: 145 atccggtggtgctcatgttcctggcggactggaac 179 ||||||||||||| |||||| ||||||||||||| Sbjct: 145 atccggtggtgctgatgttctgggcggactggaac 179 Score = 44.1 bits (22), Expect = 1.6 Identities = 67/82 (81%) Strand = Plus / Plus Query: 295 gagtggaggcgctgccgacgttcgtgctgatggagaatggcaaggagaagggcagggtcg 354 ||||| |||| |||||||||||| | ||||| || | ||| ||||| || ||||||||| Sbjct: 286 gagtgaaggctctgccgacgttcctcctgatcaaggagggcgaggagcagcgcagggtcg 345 Query: 355 ttggcgccaaggtggacgagct 376 | || |||||||| || ||||| Sbjct: 346 tcggtgccaaggtcgaggagct 367
>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01 map R1538, complete sequence Length = 142712 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1005 tgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtca 1064 |||||||||||||||||||| ||| ||| || ||||||||| ||||||||| ||| ||| Sbjct: 84088 tgctttgttctagcatgaaaaactgaatttgctgacaagtatttggctccaagattatca 84147 Query: 1065 ca 1066 || Sbjct: 84148 ca 84149 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1188 acagtggcttgttttctagca 1208 ||||||||||||||||||||| Sbjct: 84271 acagtggcttgttttctagca 84291
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 60.0 bits (30), Expect = 3e-05 Identities = 111/137 (81%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 |||||||| |||||||||| ||||||||||||| ||| ||||| | |||| ||||| | Sbjct: 99757 ctagatctagaaacagtgggttgttttctagcactccaagaaatcaaattacttccaaga 99698 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 || | ||||| || ||||| || | |||||||| ||||||||||||| |||| || | Sbjct: 99697 aacacagcaaatcctcctgtagat--tttgtcatctgggcatcctgcccaatctgcatca 99640 Query: 1296 gaaaaagcactcacaag 1312 || |||||||| ||||| Sbjct: 99639 gagaaagcacttacaag 99623
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Minus Query: 1263 ctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 ||||||||||| |||||||||||||||| || ||| |||||||| |||| Sbjct: 158061 ctgtcatctagacatcctgcccagtctgcatcagagaaagcactaacaa 158013
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1263 ctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 ||||||||||| |||||||||||||||| || ||| |||||||| |||| Sbjct: 122768 ctgtcatctagacatcctgcccagtctgcatcagagaaagcactaacaa 122816 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 ||||| ||||||||||||||||| || |||| || ||||| || || ||||||| ||| Sbjct: 122507 atgtgttttgttctagcatgaaacacaggatttgctgacaaataggtagctccaatatta 122566 Query: 1062 tcacacca 1069 |||||||| Sbjct: 122567 tcacacca 122574
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1395 tgaactgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatca 1454 |||||||| || || ||||||||||||| ||||||||| || || | |||||||||||| Sbjct: 95187 tgaactgtagtaggagcatgtaaaaactgacacaccttattcactgagaaggagatatca 95246 Query: 1455 ggtct 1459 ||||| Sbjct: 95247 ggtct 95251
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1395 tgaactgtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatca 1454 |||||||| || || ||||||||||||| ||||||||| || || | |||||||||||| Sbjct: 21201 tgaactgtagtaggagcatgtaaaaactgacacaccttattcactgagaaggagatatca 21260 Query: 1455 ggtct 1459 ||||| Sbjct: 21261 ggtct 21265
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 1263 ctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 ||||||||||| |||||||||||||||| || ||| |||||||| |||| Sbjct: 21858 ctgtcatctagacatcctgcccagtctgcatcagagaaagcactaacaa 21906 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 ||||| ||||||||||||||||| || |||| || ||||| || || ||||||| ||| Sbjct: 21597 atgtgttttgttctagcatgaaacacaggatttgctgacaaataggtagctccaatatta 21656 Query: 1062 tcacacca 1069 |||||||| Sbjct: 21657 tcacacca 21664
>emb|CR855053.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101K10, complete sequence Length = 104269 Score = 56.0 bits (28), Expect = 4e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaag 1025 ||||||||||||| ||||||||| |||| | || || || ||||||||||||||||| Sbjct: 9038 gcaactctctctcttacaaaatgataatcaacttctatatgttttgttctagcatgaaac 9097 Query: 1026 actagattggcagacaagtatgtggctccaacattgtcacacca 1069 || ||||| | ||||| ||||| ||||| | ||| |||||||| Sbjct: 9098 acaggattgactgacaaatatgtagctcccaaattatcacacca 9141 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1229 tccaaaaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtc 1288 ||||| ||||| |||||| || | ||| || | ||||||||||| |||||||||| || Sbjct: 9301 tccaagaaatactgcaaaacctcttgtagatcttctgtcatctacagatcctgcccaatc 9360 Query: 1289 tgaattagaaaaagcactcacaagtgtagaag 1320 || || |||||||||||| ||||| ||||||| Sbjct: 9361 tgcatcagaaaaagcactaacaagagtagaag 9392 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtct 1459 ||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||| Sbjct: 9479 gcatgtaaaaactgacagaccttatttactgcaaaagaaatatctggtct 9528
>emb|CR855041.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0105N24, complete sequence Length = 90501 Score = 56.0 bits (28), Expect = 4e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaag 1025 ||||||||||||| ||||||||| |||| | || || || ||||||||||||||||| Sbjct: 78272 gcaactctctctcttacaaaatgataatcaacttctatatgttttgttctagcatgaaac 78331 Query: 1026 actagattggcagacaagtatgtggctccaacattgtcacacca 1069 || ||||| | ||||| ||||| ||||| | ||| |||||||| Sbjct: 78332 acaggattgactgacaaatatgtagctcccaaattatcacacca 78375 Score = 56.0 bits (28), Expect = 4e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 1229 tccaaaaaatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtc 1288 ||||| ||||| |||||| || | ||| || | ||||||||||| |||||||||| || Sbjct: 78535 tccaagaaatactgcaaaacctcttgtagatcttctgtcatctacagatcctgcccaatc 78594 Query: 1289 tgaattagaaaaagcactcacaagtgtagaag 1320 || || |||||||||||| ||||| ||||||| Sbjct: 78595 tgcatcagaaaaagcactaacaagagtagaag 78626 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtct 1459 ||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||| Sbjct: 78713 gcatgtaaaaactgacagaccttatttactgcaaaagaaatatctggtct 78762
>gb|DQ365823.1| Oryza australiensis transposon Ty1/copia LTR retrotransposon koala gag/pol pseudogene, complete sequence Length = 4992 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||||||| |||||| |||||| ||||||||||| |||||||| Sbjct: 4528 acaaaatgataatctacctcaatatgctttgttctggcatgaaa 4485
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062E01 Length = 161804 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtc 1469 ||||||||| ||| ||| ||||||||||| | ||| || ||||| |||||||| | |||| Sbjct: 65431 gcatgtaaatactgacataccttgtttactgaaaatgatatatctggtcttgttaatgtc 65372 Query: 1470 aaatactg 1477 |||||||| Sbjct: 65371 aaatactg 65364 Score = 50.1 bits (25), Expect = 0.026 Identities = 73/89 (82%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattggcagac 1040 ||||||||| |||| | ||| || ||||||||||| |||||||| ||| |||| || | Sbjct: 65860 acaaaatgataatccacctctatatgctttgttctggcatgaaaaactggatttgctgtt 65801 Query: 1041 aagtatgtggctccaacattgtcacacca 1069 |||||| | ||||||| ||| |||||||| Sbjct: 65800 aagtatttagctccaatattatcacacca 65772
>ref|NM_001070454.1| Oryza sativa (japonica cultivar-group) Os09g0559600 (Os09g0559600) mRNA, complete cds Length = 586 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||||||||||||||||||||| Sbjct: 286 gtggaggcgctgccgacgttcgtgctg 312
>ref|NM_001068939.1| Oryza sativa (japonica cultivar-group) Os08g0544300 (Os08g0544300) mRNA, complete cds Length = 2841 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Plus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 572 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 631 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 632 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 690 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 277 agcttttgtaaaaccatctgcaacctgatcttt 309
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||||||||||||||||||||| Sbjct: 139692 gtggaggcgctgccgacgttcgtgctg 139718
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete sequence Length = 164352 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 71867 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 71808 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 71807 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 71749 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 72162 agcttttgtaaaaccatctgcaacctgatcttt 72130
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 54.0 bits (27), Expect = 0.002 Identities = 87/107 (81%) Strand = Plus / Plus Query: 965 tgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||||| ||||| | |||||||||||| || || ||||||||||| | ||| |||||||| Sbjct: 69823 tgcaaccctctcacgcacaaaatgaaagtcaatttcaatgtgcttagctcttgcatgaaa 69882 Query: 1025 gactagattggcagacaagtatgtggctccaacattgtcacaccaga 1071 || |||| || | |||||| || ||||| | ||| |||||||||| Sbjct: 69883 taccggatttgccgccaagtaagttgctcctaaattatcacaccaga 69929 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1451 atcaggtcttgtaagtgtcaaatactgaagagc 1483 |||||||| ||||||||||||||| |||||||| Sbjct: 70172 atcaggtcgtgtaagtgtcaaatattgaagagc 70204
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 54.0 bits (27), Expect = 0.002 Identities = 69/83 (83%) Strand = Plus / Minus Query: 1122 acccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgctagat 1181 ||||||||||| ||||| |||||||| |||| | || || |||||||| |||| ||| Sbjct: 26022 acccatatgacctcagccgtggcattagctaaggatttatattctgcctcggtgcttgat 25963 Query: 1182 ctggaaacagtggcttgttttct 1204 ||||| ||||| ||||||||||| Sbjct: 25962 ctggatacagttgcttgttttct 25940
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 1230 ccaaaaaatattgcaaacccacctgttgaacgtctgtcatcta 1272 |||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 107471 ccaataaatatagcaaacccacctgttgaccttctgtcatcta 107429 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| ||| |||| |||| || ||| | || |||| |||| Sbjct: 107701 atgtgctttgttcttgcatgaaacactggattaacagataaatattttgcaccaagattg 107642 Query: 1062 tcacacca 1069 |||||||| Sbjct: 107641 tcacacca 107634
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 999 tcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaaca 1058 ||||| |||||||||||||||||||| ||| | || ||||| | || ||||||||| | Sbjct: 110203 tcaatatgctttgttctagcatgaaacactgggtttgcagaaagatacttggctccaaga 110144 Query: 1059 ttgtcacacca 1069 ||||||||||| Sbjct: 110143 ttgtcacacca 110133
>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1065_E04 Length = 115865 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||||||||||||||||||||| Sbjct: 64973 gtggaggcgctgccgacgttcgtgctg 64999
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Minus Query: 1262 tctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaagtgtagaag 1320 ||||||||||| |||||||||| |||| || |||||||||||| ||||| ||||||| Sbjct: 61164 tctgtcatctacagatcctgcccaatctgcatcagaaaaagcactaacaagagtagaag 61106 Score = 46.1 bits (23), Expect = 0.41 Identities = 50/59 (84%) Strand = Plus / Minus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||||||||||| ||||||||| |||| | || || || ||||||||||||||||| Sbjct: 61458 gcaactctctctcttacaaaatgataatcaacttctatatgttttgttctagcatgaaa 61400 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 1410 gcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtct 1459 ||||||||||||| ||| ||||| ||||| ||||| || ||||| ||||| Sbjct: 61016 gcatgtaaaaactgacagaccttatttactgcaaaagaaatatctggtct 60967
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 75405 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 75346 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 75345 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 75287 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 75700 agcttttgtaaaaccatctgcaacctgatcttt 75668
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 54.0 bits (27), Expect = 0.002 Identities = 39/43 (90%) Strand = Plus / Minus Query: 1230 ccaaaaaatattgcaaacccacctgttgaacgtctgtcatcta 1272 |||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 7416 ccaataaatatagcaaacccacctgttgaccttctgtcatcta 7374 Score = 48.1 bits (24), Expect = 0.10 Identities = 57/68 (83%) Strand = Plus / Minus Query: 1002 atgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattg 1061 |||||||||||||| |||||||| ||| |||| |||| || ||| | || |||| |||| Sbjct: 7646 atgtgctttgttcttgcatgaaacactggattaacagataaatattttgcaccaagattg 7587 Query: 1062 tcacacca 1069 |||||||| Sbjct: 7586 tcacacca 7579
>dbj|AK119307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-F11, full insert sequence Length = 2841 Score = 54.0 bits (27), Expect = 0.002 Identities = 96/119 (80%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 2270 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 2211 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||||| |||| || |||||| |||| ||||| Sbjct: 2210 gttgatcttctgtcatctggagatcctgcccaatctgcatctgaaaaaccactaacaag 2152 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 2565 agcttttgtaaaaccatctgcaacctgatcttt 2533
>dbj|AK109214.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-D08, full insert sequence Length = 586 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||||||||||||||||||||| Sbjct: 286 gtggaggcgctgccgacgttcgtgctg 312
>gb|AC182676.2| Populus trichocarpa clone Pop1-29E23, complete sequence Length = 62085 Score = 52.0 bits (26), Expect = 0.007 Identities = 86/106 (81%) Strand = Plus / Minus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaag 1025 |||||||| |||| ||||||||| |||| |||||||| || ||||| | ||||||||| Sbjct: 25908 gcaactctatctcggacaaaatgataatcaatctcaatatgttttgtgcgagcatgaaat 25849 Query: 1026 actagattggcagacaagtatgtggctccaacattgtcacaccaga 1071 || | || || ||||| || ||||| |||| ||||||||||||| Sbjct: 25848 acagggtttgcggacaaatacgtggcaccaaggttgtcacaccaga 25803
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 52.0 bits (26), Expect = 0.007 Identities = 53/62 (85%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 ||||| |||| |||||| |||| ||| ||||||||||| || ||||| ||||| |||||| Sbjct: 143520 gtggtaggtgaatgtaagaactgacataccttgtttactgcgaaggatatatctggtctt 143461 Query: 1461 gt 1462 || Sbjct: 143460 gt 143459
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Plus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatc 928 |||||||||| |||||||||||||| |||||||| Sbjct: 163833 gtaaagctttagtaaacccatcagctacttgatc 163866 Score = 46.1 bits (23), Expect = 0.41 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgcta 1178 |||||||| || | ||||||||| ||||| |||| |||||||| ||||||| | || Sbjct: 164057 tgcacccacataatttcagctgtagcattagctaaagccttgtattctgcctctgtactt 164116 Query: 1179 gatctggaaacagtggcttgttt 1201 || || ||||||||||||||||| Sbjct: 164117 gaccttgaaacagtggcttgttt 164139
>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete sequence Length = 137220 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatc 928 |||||||||| |||||||||||||| |||||||| Sbjct: 122253 gtaaagctttagtaaacccatcagctacttgatc 122220 Score = 46.1 bits (23), Expect = 0.41 Identities = 68/83 (81%) Strand = Plus / Minus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgcta 1178 |||||||| || | ||||||||| ||||| |||| |||||||| ||||||| | || Sbjct: 122029 tgcacccacataatttcagctgtagcattagctaaagccttgtattctgcctctgtactt 121970 Query: 1179 gatctggaaacagtggcttgttt 1201 || || ||||||||||||||||| Sbjct: 121969 gaccttgaaacagtggcttgttt 121947
>gb|AY187024.1| Hordeum vulgare subsp. vulgare phosphate transporter HvPT4 gene, complete cds Length = 6561 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Minus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgc 1156 ||||||||||||| |||||| || |||||||||||||| Sbjct: 4174 tgcacccatatgatttcagcggtagcatttgctagtgc 4137
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0407B12 Length = 148762 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatc 928 |||||||||| |||||||||||||| |||||||| Sbjct: 143981 gtaaagctttagtaaacccatcagctacttgatc 143948 Score = 46.1 bits (23), Expect = 0.41 Identities = 68/83 (81%) Strand = Plus / Minus Query: 1119 tgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatgcta 1178 |||||||| || | ||||||||| ||||| |||| |||||||| ||||||| | || Sbjct: 143757 tgcacccacataatttcagctgtagcattagctaaagccttgtattctgcctctgtactt 143698 Query: 1179 gatctggaaacagtggcttgttt 1201 || || ||||||||||||||||| Sbjct: 143697 gaccttgaaacagtggcttgttt 143675
>dbj|AP006235.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017N10 Length = 168535 Score = 52.0 bits (26), Expect = 0.007 Identities = 137/174 (78%) Strand = Plus / Minus Query: 1138 ctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaaacagtggctt 1197 |||| |||||||| ||||| ||||| | ||||| ||||||| ||||| ||||| |||| Sbjct: 132962 ctgttgcatttgccagtgctttgtattcagcctccgtgctagacctggacacagttgctt 132903 Query: 1198 gttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttg 1257 ||||||| ||| |||||| | || |||| |||| | | | |||||| || || || | Sbjct: 132902 gttttcttgcactccatgacacaaggttagagccaagataaactgcaaaacctccagtag 132843 Query: 1258 aacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 | || ||||||||||| ||||| ||||| |||| ||| | ||||||||| |||| Sbjct: 132842 accgcctgtcatctagacatccagcccaatctgcatttgtaaaagcactaacaa 132789
>dbj|AP005876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0092O08 Length = 145596 Score = 52.0 bits (26), Expect = 0.007 Identities = 137/174 (78%) Strand = Plus / Minus Query: 1138 ctgtggcatttgctagtgccttgtaccctgcctcgatgctagatctggaaacagtggctt 1197 |||| |||||||| ||||| ||||| | ||||| ||||||| ||||| ||||| |||| Sbjct: 35424 ctgttgcatttgccagtgctttgtattcagcctccgtgctagacctggacacagttgctt 35365 Query: 1198 gttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacctgttg 1257 ||||||| ||| |||||| | || |||| |||| | | | |||||| || || || | Sbjct: 35364 gttttcttgcactccatgacacaaggttagagccaagataaactgcaaaacctccagtag 35305 Query: 1258 aacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaa 1311 | || ||||||||||| ||||| ||||| |||| ||| | ||||||||| |||| Sbjct: 35304 accgcctgtcatctagacatccagcccaatctgcatttgtaaaagcactaacaa 35251
>gb|AC183424.2| Populus trichocarpa clone Pop1-40P5, complete sequence Length = 137421 Score = 50.1 bits (25), Expect = 0.026 Identities = 88/109 (80%) Strand = Plus / Plus Query: 963 tttgcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatga 1022 ||||||||||| |||| ||||||||| |||| | ||||| || ||||| | ||||||| Sbjct: 71406 tttgcaactctatctcggacaaaatgataatcgacctcaacatgttttgtgcgagcatga 71465 Query: 1023 aagactagattggcagacaagtatgtggctccaacattgtcacaccaga 1071 || || |||| ||||||| || ||||| |||| ||||||||||||| Sbjct: 71466 aaaacaggattcacagacaaataagtggcaccaaggttgtcacaccaga 71514
>gb|DQ004853.1| Oryza sativa (japonica cultivar-group) chromosome 5 unnamed retrotransposon, partial sequence Length = 4884 Score = 50.1 bits (25), Expect = 0.026 Identities = 31/33 (93%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 |||||||||||||| ||||||||||| |||||| Sbjct: 4560 aaagcttttgtaaaaccatcagcaacctgatct 4528
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatg 1021 |||||||||||||| || |||| |||||||||||| ||||| Sbjct: 130659 acaaaatgaaaatcaatgtcaaagtgctttgttctggcatg 130619 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatg 1021 |||||||||||||| || |||| |||||||||||| ||||| Sbjct: 135344 acaaaatgaaaatcaatgtcaaagtgctttgttctggcatg 135304
>emb|AL030978.1|ATM4I22 Arabidopsis thaliana DNA chromosome 4, P1 clone M4I22 (ESSA project) Length = 83371 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatg 1021 |||||||||||||| || |||| |||||||||||| ||||| Sbjct: 2813 acaaaatgaaaatcaatgtcaaagtgctttgttctggcatg 2773 Score = 50.1 bits (25), Expect = 0.026 Identities = 37/41 (90%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatg 1021 |||||||||||||| || |||| |||||||||||| ||||| Sbjct: 7498 acaaaatgaaaatcaatgtcaaagtgctttgttctggcatg 7458
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 50.1 bits (25), Expect = 0.026 Identities = 109/137 (79%) Strand = Plus / Minus Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 ||||||||||| ||||||||||| |||| ||| |||||| || ||||| ||||| | | Sbjct: 82218 ctagatctggatacagtggcttgctttcgcgcactccatgacataagattgggtcctata 82159 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 || | ||||| || || || ||||| || ||||| || ||||||||| | |||| || | Sbjct: 82158 aacacagcaaaacctccagtggaacgcctatcatccagacatcctgcctaatctgcatca 82099 Query: 1296 gaaaaagcactcacaag 1312 || |||||||| ||||| Sbjct: 82098 gagaaagcactaacaag 82082
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 50.1 bits (25), Expect = 0.026 Identities = 91/112 (81%), Gaps = 2/112 (1%) Strand = Plus / Plus Query: 960 ttatttgcaactctctctc--acacaaaatgaaaatctatctcaatgtgctttgttctag 1017 |||||||| |||||||||| | ||||| ||| || | |||||||| ||||| |||| | Sbjct: 90585 ttatttgctactctctctcttatacaaagtgataaccaatctcaatatgcttcgttcgtg 90644 Query: 1018 catgaaagactagattggcagacaagtatgtggctccaacattgtcacacca 1069 ||||||||||| |||| | || || ||||| ||||| | |||||||||||| Sbjct: 90645 catgaaagactggatttgatgataaatatgttgctcctaaattgtcacacca 90696
>gb|AC172299.9| Glycine max clone gmw2-12n11, complete sequence Length = 168892 Score = 48.1 bits (24), Expect = 0.10 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1437 acagcaaaggagatatcaggtcttgtaa 1464 ||||||||||| |||||||||||||||| Sbjct: 44281 acagcaaaggaaatatcaggtcttgtaa 44254
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 48.1 bits (24), Expect = 0.10 Identities = 159/204 (77%) Strand = Plus / Minus Query: 1116 gattgcacccatatgacttcagctgtggcatttgctagtgccttgtaccctgcctcgatg 1175 |||| |||||| |||| |||||| ||||||||||||| || |||||| | || ||| | Sbjct: 296219 gattccacccaaatgatttcagcagtggcatttgctaatgatttgtactcagcttcggta 296160 Query: 1176 ctagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaa 1235 || || || || || | ||||||||||||| | ||| ||||| || || || |||||| Sbjct: 296159 cttgaccttgatactatagcttgttttctagtactccaggaaataaggtttggaccaaaa 296100 Query: 1236 aatattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctgaatta 1295 |||| |||||| || || ||||| ||| ||||| | ||||||| |||||| | || | Sbjct: 296099 aatactgcaaatcctccagttgactttctatcatcaacacatcctgtccagtcagcatca 296040 Query: 1296 gaaaaagcactcacaagtgtagaa 1319 || |||||||| ||||||| |||| Sbjct: 296039 gagaaagcactaacaagtgaagaa 296016
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||||||||||||| || ||||||||||| ||||| || ||||| Sbjct: 76467 acaaaatgaaaatcaatttcaatgtgcttggttcttgcgtgaaa 76510 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1464 agtgtcaaatactgaagagcacctaccagacatctgtatttagtag 1509 |||||||||||||| |||||||| || |||| ||| || ||||||| Sbjct: 76950 agtgtcaaatactggagagcaccaacaagacttctatacttagtag 76995
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 48.1 bits (24), Expect = 0.10 Identities = 84/104 (80%) Strand = Plus / Minus Query: 966 gcaactctctctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaag 1025 ||||||||||||| | ||||||| |||| | || || ||||||||||| |||||||| Sbjct: 18515 gcaactctctctcttaaaaaatgataatcaacttctatatgctttgttctggcatgaaac 18456 Query: 1026 actagattggcagacaagtatgtggctccaacattgtcacacca 1069 || ||||| | ||||| ||||| ||||| | ||||||||||| Sbjct: 18455 acatgattgactgacaaatatgtagctcctaagttgtcacacca 18412
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 48.1 bits (24), Expect = 0.10 Identities = 51/60 (85%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtcca 954 |||| ||||| |||||||||||||| | ||||| |||| || |||||||||||| |||| Sbjct: 123833 gtaaggctttggtaaacccatcagccaactgatcatttgtattaataaaccgaatatcca 123774
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 48.1 bits (24), Expect = 0.10 Identities = 51/60 (85%) Strand = Plus / Minus Query: 895 gtaaagcttttgtaaacccatcagcaacttgatcttttgaatgaataaaccgaatgtcca 954 |||| ||||| |||||||||||||| | ||||| |||| || |||||||||||| |||| Sbjct: 85467 gtaaggctttggtaaacccatcagccaactgatcatttgtattaataaaccgaatatcca 85408
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 48.1 bits (24), Expect = 0.10 Identities = 60/72 (83%) Strand = Plus / Minus Query: 1412 atgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtcaa 1471 ||||||||||| ||| ||||| ||||| ||||| || |||||||| || || | |||| Sbjct: 56904 atgtaaaaactgacagaccttatttactgcaaatgaaatatcaggcctagtcaaagtcag 56845 Query: 1472 atactgaagagc 1483 |||||||||||| Sbjct: 56844 atactgaagagc 56833
>dbj|AP005261.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0640E12 Length = 167353 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||||||| |||| | ||| |||||||||||||| |||||||| Sbjct: 85828 acaaaatgataatcaacctctatgtgctttgttctggcatgaaa 85785 Score = 44.1 bits (22), Expect = 1.6 Identities = 91/114 (79%) Strand = Plus / Minus Query: 1177 tagatctggaaacagtggcttgttttctagcagaccatgaaatgagattaggtccaaaaa 1236 ||||||| || || ||||| |||||||||||| |||||| | ||||||| |||| || Sbjct: 85632 tagatcttgatactgtggcctgttttctagcattccatgacactagattagaaccaataa 85573 Query: 1237 atattgcaaacccacctgttgaacgtctgtcatctaggcatcctgcccagtctg 1290 | || ||||| |||| ||||| | ||||||||||| || || |||||||||| Sbjct: 85572 agatagcaaatccactagttgaccttctgtcatctatgctaccagcccagtctg 85519
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 48.1 bits (24), Expect = 0.10 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1412 atgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtcaa 1471 ||||||||||| ||| ||||| ||||| ||||| || |||||||| || || | |||| Sbjct: 980 atgtaaaaactgacagaccttatttactgcaaatgaaatatcaggcctagtcaaagtcag 1039 Query: 1472 atactgaagagc 1483 |||||||||||| Sbjct: 1040 atactgaagagc 1051
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 48.1 bits (24), Expect = 0.10 Identities = 60/72 (83%) Strand = Plus / Plus Query: 1412 atgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtcttgtaagtgtcaa 1471 ||||||||||| ||| ||||| ||||| ||||| || |||||||| || || | |||| Sbjct: 59953 atgtaaaaactgacagaccttatttactgcaaatgaaatatcaggcctagtcaaagtcag 60012 Query: 1472 atactgaagagc 1483 |||||||||||| Sbjct: 60013 atactgaagagc 60024
>emb|CT009655.2| Medicago truncatula chromosome 5 clone mth2-121g11, COMPLETE SEQUENCE Length = 126690 Score = 48.1 bits (24), Expect = 0.10 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1419 aactaacacaccttgtttacagcaaaggagat 1450 ||||| ||||||||||| |||||||||||||| Sbjct: 32011 aactagcacaccttgttgacagcaaaggagat 32042
>dbj|AK241734.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065200H08, full insert sequence Length = 721 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||| ||||||||||||||||| Sbjct: 322 gtggaggcgatgccgacgttcgtgctg 348
>ref|NM_001065625.1| Oryza sativa (japonica cultivar-group) Os07g0190800 (Os07g0190800) mRNA, complete cds Length = 417 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||| ||||||||||||||||| Sbjct: 280 gtggaggcgatgccgacgttcgtgctg 306
>gb|DQ644591.1| Capsicum annuum clone pC.a.D Ty1-copia retrotransposon nonfunctional polyprotein gene, partial sequence Length = 985 Score = 46.1 bits (23), Expect = 0.41 Identities = 32/35 (91%) Strand = Plus / Minus Query: 999 tcaatgtgctttgttctagcatgaaagactagatt 1033 ||||| |||||||||||||||||||| ||| |||| Sbjct: 978 tcaatatgctttgttctagcatgaaaaactggatt 944
>emb|CT986266.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 981 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaa 1023 ||||||||||| |||||||||||||| || || | |||||||| Sbjct: 30 acaaaatgaaagtctatctcaatgtgtttggtgcgagcatgaa 72
>emb|CT985848.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 849 Score = 46.1 bits (23), Expect = 0.41 Identities = 38/43 (88%) Strand = Plus / Plus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaa 1023 ||||||||||| |||||||||||||| || || | |||||||| Sbjct: 30 acaaaatgaaagtctatctcaatgtgtttggtgcgagcatgaa 72
>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete sequence Length = 72636 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatcttttgaa 935 |||| ||||||||| ||||| ||||||||||||| |||| Sbjct: 8554 aaaggttttgtaaatccatctgcaacttgatcttgtgaa 8516
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||| ||||| ||||||||||||||||| Sbjct: 173967 acaaaatgatagtcaacctcaatatgcttagttctagcatgaaagac 173921
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||| ||||| ||||||||||||||||| Sbjct: 24649 acaaaatgatagtcaacctcaatatgcttagttctagcatgaaagac 24603
>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence Length = 178068 Score = 46.1 bits (23), Expect = 0.41 Identities = 23/23 (100%) Strand = Plus / Minus Query: 218 ggccttggctaaaaggaaacatg 240 ||||||||||||||||||||||| Sbjct: 137917 ggccttggctaaaaggaaacatg 137895
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 46.1 bits (23), Expect = 0.41 Identities = 95/119 (79%) Strand = Plus / Plus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 63972 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 64031 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||||| | |||||||| | |||| || |||||| |||| ||||| Sbjct: 64032 gttgatcttctgtcatctggagatcctgcctaatctgcatctgaaaaaccactaacaag 64090 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 63677 agcttttgtaaaaccatctgcaacctgatcttt 63709
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1437 acagcaaaggagatatcaggtcttgta 1463 |||||| |||||||||||||||||||| Sbjct: 51191 acagcataggagatatcaggtcttgta 51217
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1430 cttgtttacagcaaaggagatatcagg 1456 |||| |||||||||||||||||||||| Sbjct: 60810 cttgcttacagcaaaggagatatcagg 60836
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatct 929 ||||||||||||| ||||||||||||| Sbjct: 46904 tttgtaaacccattagcaacttgatct 46930
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||||||||| ||||||||||| ||||| Sbjct: 39756 acaaaatgatagtcaacctcaatgtgcttagttctagcatggaagac 39710
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 46.1 bits (23), Expect = 0.41 Identities = 59/71 (83%) Strand = Plus / Minus Query: 999 tcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctccaaca 1058 ||||| |||||||||||||||||||| ||| | || | ||||| ||||| || |||| | Sbjct: 32712 tcaatatgctttgttctagcatgaaacactgggttaactgacaaatatgttgccccaata 32653 Query: 1059 ttgtcacacca 1069 || |||||||| Sbjct: 32652 ttatcacacca 32642
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 46.1 bits (23), Expect = 0.41 Identities = 95/119 (79%) Strand = Plus / Minus Query: 1194 gcttgttttctagcagaccatgaaatgagattaggtccaaaaaatattgcaaacccacct 1253 ||||||||||||||| |||||| | ||||| || || ||||| | |||||| || ||| Sbjct: 100774 gcttgttttctagcactccatgatacaagatttgggcctaaaaacactgcaaaacctcct 100715 Query: 1254 gttgaacgtctgtcatctaggcatcctgcccagtctgaattagaaaaagcactcacaag 1312 ||||| | |||||||| | | |||||||||| |||| || |||||| |||| ||||| Sbjct: 100714 gttgatcttctgtcatatggagatcctgcccaatctgcatctgaaaaaccactaacaag 100656 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 899 agcttttgtaaacccatcagcaacttgatcttt 931 |||||||||||| ||||| ||||| |||||||| Sbjct: 101069 agcttttgtaaaaccatctgcaacctgatcttt 101037
>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003E08 Length = 161095 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Minus Query: 297 gtggaggcgctgccgacgttcgtgctg 323 ||||||||| ||||||||||||||||| Sbjct: 98606 gtggaggcgatgccgacgttcgtgctg 98580
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 46.1 bits (23), Expect = 0.41 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1430 cttgtttacagcaaaggagatatcagg 1456 |||| |||||||||||||||||||||| Sbjct: 35727 cttgcttacagcaaaggagatatcagg 35753
>dbj|AP003957.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1470_H06 Length = 62794 Score = 46.1 bits (23), Expect = 0.41 Identities = 41/47 (87%) Strand = Plus / Minus Query: 981 acaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagac 1027 ||||||||| | || | |||||||||||| ||||||||||| ||||| Sbjct: 48523 acaaaatgatagtcaacctcaatgtgcttagttctagcatggaagac 48477
>gb|AF464738.1| Zea mays cultivar B73 putative gag protein, putative gag-pol precursor, putative transposase, putative copia-type pol polyprotein, putative copia-like retrotransposon Hopscotch polyprotein, putative gag protein, putative prpol, putative prpol, putative pol protein, putative pol protein, putative gag protein, and teosinte branched1 protein genes, complete cds Length = 130843 Score = 46.1 bits (23), Expect = 0.41 Identities = 77/95 (81%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaagactagattg 1034 |||| |||||||||| |||| | ||||| || |||||||| |||||||| | ||||| Sbjct: 65120 tctctcacaaaatgataatccacttcaatatgttttgttcttgcatgaaatataggattg 65061 Query: 1035 gcagacaagtatgtggctccaacattgtcacacca 1069 || ||||| ||| | ||||| | |||||||||||| Sbjct: 65060 gctgacaaatatttagctcccaaattgtcacacca 65026
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 46.1 bits (23), Expect = 0.41 Identities = 35/39 (89%) Strand = Plus / Plus Query: 964 ttgcaactctctctcacacaaaatgaaaatctatctcaa 1002 |||| ||||| |||| ||||||||||||||| ||||||| Sbjct: 91235 ttgctactctttctctcacaaaatgaaaatcaatctcaa 91273
>emb|CT828650.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI006N06, full insert sequence Length = 545 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 296 agtggaggcgctgccgacgttc 317 |||||||||||||||||||||| Sbjct: 316 agtggaggcgctgccgacgttc 337
>ref|NM_001069821.1| Oryza sativa (japonica cultivar-group) Os09g0441600 (Os09g0441600) mRNA, complete cds Length = 5091 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 902 ttttgtaaacccatcagcaacttgatcttttgaa 935 ||||||||| ||||| ||||||||||||| |||| Sbjct: 5028 ttttgtaaatccatctgcaacttgatcttgtgaa 4995
>gb|DQ984517.1| Tripsacum dactyloides cultivar Pete mitochondrion, complete genome Length = 704100 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 21856 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 21909
>gb|DQ984518.1| Sorghum bicolor mitochondrion, complete genome Length = 468628 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 265823 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 265770
>gb|DQ645537.1| Zea luxurians mitochondrion, complete genome Length = 539368 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 392459 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 392406
>gb|DQ645539.1| Zea mays subsp. parviglumis mitochondrion, complete genome Length = 680603 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 392199 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 392146 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 571291 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 571344
>gb|DQ645538.1| Zea perennis mitochondrion, complete genome Length = 570354 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 42719 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 42772
>gb|DQ645536.1| Zea mays subsp. mays genotype CMS-C mitochondrion, complete genome Length = 739719 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 130504 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 130451 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 415033 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 415086
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 79449 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 79396
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 186655 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 186708 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Plus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 315347 gtttactgcatatgagatatcaggtcttgtaaaagttaagtactgtagagcacc 315400
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 261704 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 261651
>gb|AC174376.8| Medicago truncatula clone mth2-56h21, complete sequence Length = 111561 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgt 1012 |||| ||||||||||| ||| ||||||||||| ||||| Sbjct: 44135 tctcgcacaaaatgaatatccatctcaatgtgttttgt 44098
>gb|AC174351.5| Medicago truncatula clone mth2-7h5, complete sequence Length = 109873 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgt 1012 |||| ||||||||||| ||| ||||||||||| ||||| Sbjct: 34339 tctcgcacaaaatgaatatccatctcaatgtgttttgt 34302
>gb|BC108598.1| Xenopus laevis hypothetical protein MGC131111, mRNA (cDNA clone MGC:131111 IMAGE:7982974), complete cds Length = 1659 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Minus Query: 976 ctcacacaaaatgaaaatctatctca 1001 ||||||||||||||||||| |||||| Sbjct: 1212 ctcacacaaaatgaaaatcaatctca 1187
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 44.1 bits (22), Expect = 1.6 Identities = 46/54 (85%) Strand = Plus / Minus Query: 1433 gtttacagcaaaggagatatcaggtcttgtaagtgtcaaatactgaagagcacc 1486 |||||| ||| | ||||||||||||||||||| || || ||||| |||||||| Sbjct: 369054 gtttactgcatatgagatatcaggtcttgtaaaagtgaagtactgtagagcacc 369001
>gb|AF488414.1| Pennisetum glaucum BAC 311G2 complete sequence Length = 123096 Score = 44.1 bits (22), Expect = 1.6 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1008 tttgttctagcatgaaagactagattggcagacaagtatgtggctccaacattgtcacac 1067 |||| ||| ||||| || |||||||| ||| | || ||||||| ||||| |||||||||| Sbjct: 70096 tttgctcttgcatggaatactagatttgcacataaatatgtggatccaagattgtcacac 70155 Query: 1068 ca 1069 || Sbjct: 70156 ca 70157
>gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete sequence Length = 126477 Score = 44.1 bits (22), Expect = 1.6 Identities = 34/38 (89%) Strand = Plus / Plus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgt 1012 |||| ||||||||||| ||| ||||||||||| ||||| Sbjct: 12501 tctcgcacaaaatgaatatccatctcaatgtgttttgt 12538
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 44.1 bits (22), Expect = 1.6 Identities = 61/74 (82%) Strand = Plus / Plus Query: 996 atctcaatgtgctttgttctagcatgaaagactagattggcagacaagtatgtggctcca 1055 ||||| ||||| |||||||||||||| ||||| |||||| || | ||| || ||||| Sbjct: 24661 atctctatgtgttttgttctagcatggaagaccggattggatgataggtaggttgctcct 24720 Query: 1056 acattgtcacacca 1069 | |||||||||||| Sbjct: 24721 aaattgtcacacca 24734
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1050 gctccaacattgtcacaccaga 1071 |||||||||||||||||||||| Sbjct: 27387 gctccaacattgtcacaccaga 27408
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 822 tgtttaacacccttccttaatcacaacttt 851 ||||||||||||| ||||||||| |||||| Sbjct: 100994 tgtttaacaccctcccttaatcataacttt 100965 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 100919 aaagcctttgtaaaaccatctgcaacttgatct 100887
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 1.6 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1467 gtcaaatactgaagagcacctaccagacatctgtatttagta 1508 ||||||||||| ||||| || |||| || ||||||||||||| Sbjct: 120052 gtcaaatactgcagagctccaaccaaacttctgtatttagta 120093
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 902 ttttgtaaacccatcagcaacttgatcttttgaa 935 ||||||||| ||||| ||||||||||||| |||| Sbjct: 35155 ttttgtaaatccatctgcaacttgatcttgtgaa 35122
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1008 tttgttctagcatgaaagactagatt 1033 ||||||||||||||||| |||||||| Sbjct: 158192 tttgttctagcatgaaacactagatt 158217
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Minus Query: 902 ttttgtaaacccatcagcaacttgatcttttgaa 935 ||||||||| ||||| ||||||||||||| |||| Sbjct: 163124 ttttgtaaatccatctgcaacttgatcttgtgaa 163091
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 931 ttgaatgaataaaccgaatgtc 952 |||||||||||||||||||||| Sbjct: 1577053 ttgaatgaataaaccgaatgtc 1577074
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141067 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||| ||||||||| ||||| | |||||||||||||| || |||||||| Sbjct: 11763 tctctcacaaaatggaaatcaacttcaatgtgctttgtccttgcatgaaa 11714
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Minus Query: 975 tctcacacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 |||| ||||||||| ||||| | |||||||||||||| || |||||||| Sbjct: 142686 tctctcacaaaatggaaatcaacttcaatgtgctttgtccttgcatgaaa 142637
>ref|NM_001073064.1| Oryza sativa (japonica cultivar-group) Os12g0265200 (Os12g0265200) mRNA, complete cds Length = 3609 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 3320 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 3261 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 3260 gtcagagtcaaatactg 3244
>ref|NM_001061486.1| Oryza sativa (japonica cultivar-group) Os05g0222100 (Os05g0222100) mRNA, complete cds Length = 4296 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 3734 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 3675 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 3674 gtcagagtcaaatactg 3658
>gb|DQ486680.1| Drosophila melanogaster strain Oregon P transposable element mi1e31, complete sequence Length = 377 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1554 tctgtactagataaaggagtg 1574 ||||||||||||||||||||| Sbjct: 165 tctgtactagataaaggagtg 185
>gb|AC159804.18| Glycine max clone gmp1-34b24, complete sequence Length = 136901 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1440 gcaaaggagatatcaggtcttgtaa 1464 ||||||||||| ||||||||||||| Sbjct: 121495 gcaaaggagatgtcaggtcttgtaa 121471
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 gcgccaaggtggacgagctgg 378 ||||||||||||||||||||| Sbjct: 3112518 gcgccaaggtggacgagctgg 3112538
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 42.1 bits (21), Expect = 6.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 840 aatcacaactttatcaagttgagattatgtttgaagt 876 ||||||||||||| || ||||||||| | |||||||| Sbjct: 13045 aatcacaactttaccaggttgagattgtatttgaagt 13081
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 3094 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 3035 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 3034 gtcagagtcaaatactg 3018
>gb|AC148291.22| Medicago truncatula clone mth2-14n3, complete sequence Length = 138853 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||| |||| |||| ||||||||||| |||||||| ||||||| Sbjct: 18939 cacaacatgacaatcaatctcaatgtgttttgttctctcatgaaa 18983
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| || ||||| |||||||||||||||||| Sbjct: 29311 aaagccttggtaaaaccatcagcaacttgatct 29279
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| || ||||| |||||||||||||||||| Sbjct: 107621 aaagccttggtaaaaccatcagcaacttgatct 107589
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1262 tctgtcatctaggcatcctgcccagtctg 1290 ||||||||| || |||||||||||||||| Sbjct: 62971 tctgtcatcaagacatcctgcccagtctg 62943
>gb|AF483860.1| Phaseolus vulgaris clone D7 microsatellite sequence Length = 363 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 995 tatctcaatgtgctttgttct 1015 ||||||||||||||||||||| Sbjct: 306 tatctcaatgtgctttgttct 286
>gb|AC135422.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0043H23, complete sequence Length = 134097 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 92802 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 92743 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 92742 gtcagagtcaaatactg 92726
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 128280 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 128221 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 128220 gtcagagtcaaatactg 128204
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttt 931 |||||||| ||||| |||||||||||||| Sbjct: 107878 tttgtaaagccatctgcaacttgatcttt 107906
>gb|AC124487.3| Mus musculus BAC clone RP23-452B18 from chromosome 19, complete sequence Length = 195185 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 973 tctctcacacaaaatgaaaat 993 ||||||||||||||||||||| Sbjct: 76070 tctctcacacaaaatgaaaat 76050
>gb|AC121237.19| Medicago truncatula clone mth2-22g11, complete sequence Length = 127731 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||| |||| |||| ||||||||||| |||||||| ||||||| Sbjct: 126360 cacaacatgacaatcaatctcaatgtgttttgttctctcatgaaa 126404
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 153167 aaagcctttgtaaaaccatctgcaacttgatct 153199
>gb|AC149032.3| Medicago truncatula chromosome 2 BAC clone mth2-82k13, complete sequence Length = 113691 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 993 tctatctcaatgtgctttgttctagcatg 1021 |||| ||||||||||||||||||| |||| Sbjct: 45376 tctacctcaatgtgctttgttctatcatg 45348
>gb|AC005825.4| Arabidopsis thaliana chromosome 2 clone T24I21 map mi398, complete sequence Length = 112792 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgt 1012 |||||| ||| |||| ||||||||||||||||| Sbjct: 28878 cacaaagtgataatcgatctcaatgtgctttgt 28910
>emb|CR730391.2|CNS0GQIK Tetraodon nigroviridis full-length cDNA Length = 1324 Score = 42.1 bits (21), Expect = 6.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 335 caaggagaagggcagggtcgttggcgccaaggtggac 371 |||||||||||||| ||||||||| |||||||||| Sbjct: 374 caaggagaagggcatcgtcgttggcatcaaggtggac 410
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||| |||| |||| ||||||||||| |||||||| ||||||| Sbjct: 1372 cacaacatgacaatcaatctcaatgtgttttgttctctcatgaaa 1328
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttt 931 |||||||| ||||| |||||||||||||| Sbjct: 18281 tttgtaaagccatctgcaacttgatcttt 18309
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 630 aaagcctttgtaaaaccatctgcaacttgatct 598
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| |||||||| ||||| |||||||||||| Sbjct: 127115 aaagcctttgtaaaaccatctgcaacttgatct 127083
>emb|CR931729.2| Medicago truncatula chromosome 5 clone mte1-82a1, COMPLETE SEQUENCE Length = 94751 Score = 42.1 bits (21), Expect = 6.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgttctagcatgaaa 1024 ||||| |||| |||| ||||||||||| |||||||| ||||||| Sbjct: 85159 cacaacatgacaatcaatctcaatgtgttttgttctctcatgaaa 85115
>ref|XM_950570.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU09_1080) partial mRNA Length = 870 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 ggagaatggcaaggagaagggcagg 350 |||||||||||||||||| |||||| Sbjct: 237 ggagaatggcaaggagaacggcagg 261
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 42.1 bits (21), Expect = 6.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1449 atatcaggtcttgtaagtgtcaaatactg 1477 |||||||||||||| ||||| |||||||| Sbjct: 106430 atatcaggtcttgtcagtgttaaatactg 106402
>gb|AC074284.1|AC074284 Arabidopsis thaliana chromosome 1 BAC F13E17 genomic sequence, complete sequence Length = 77290 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgt 1012 |||||| ||| ||||||||||||| |||||||| Sbjct: 44066 cacaaagtgacaatctatctcaatatgctttgt 44098
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 56238 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 56179 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 56178 gtcagagtcaaatactg 56162
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 903 tttgtaaacccatcagcaacttgatcttttgaa 935 |||||||| ||||| ||||||||||||| |||| Sbjct: 98487 tttgtaaatccatccgcaacttgatcttctgaa 98519
>dbj|AP002064.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T26G12 Length = 84785 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgt 1012 |||||| ||| ||||||||||||| |||||||| Sbjct: 58832 cacaaagtgacaatctatctcaatatgctttgt 58800
>emb|BX822870.1|CNS0A7DS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1920 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 980 cacaaaatgaaaatctatctcaatgtgctttgt 1012 |||||| ||| ||||||||||||| |||||||| Sbjct: 1554 cacaaagtgacaatctatctcaatatgctttgt 1522
>dbj|AK114491.1| Ciona intestinalis cDNA, clone:cieg003p22, full insert sequence Length = 2921 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1621 ttgcatatttttcttgagaaa 1641 ||||||||||||||||||||| Sbjct: 2194 ttgcatatttttcttgagaaa 2214
>emb|CT573092.3| Macaca mulatta chromosome 9 CH250-12B7, complete sequence Length = 144364 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1428 accttgtttacagcaaaggag 1448 ||||||||||||||||||||| Sbjct: 95191 accttgtttacagcaaaggag 95171
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 42.1 bits (21), Expect = 6.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1401 gtggttggtgcatgtaaaaactaacacaccttgtttacagcaaaggagatatcaggtctt 1460 |||||||||||||| ||| ||| |||||||| ||||| | ||| || | ||| ||||| Sbjct: 31922 gtggttggtgcatgcaaatactggcacaccttatttactgaaaatgataaatctggtcta 31863 Query: 1461 gtaagtgtcaaatactg 1477 || || ||||||||||| Sbjct: 31862 gtcagagtcaaatactg 31846
>emb|AL590451.2|CNS07EGI chromosome IX of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 251002 Score = 42.1 bits (21), Expect = 6.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 ggagaatggcaaggagaagggcagg 350 |||||||||||||||||| |||||| Sbjct: 128361 ggagaatggcaaggagaacggcagg 128385
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 42.1 bits (21), Expect = 6.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 897 aaagcttttgtaaacccatcagcaacttgatct 929 ||||| || ||||| |||||||||||||||||| Sbjct: 44415 aaagccttagtaaagccatcagcaacttgatct 44447
>gb|AC165368.5| Mus musculus BAC clone RP23-28L24 from chromosome 1, complete sequence Length = 216981 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1032 ttggcagacaagtatgtggct 1052 ||||||||||||||||||||| Sbjct: 138547 ttggcagacaagtatgtggct 138527
>dbj|AB055091.1| Ipomoea batatas retrotransposon SPRT1 like pseudogene for polyprotein, clone:1201-23 Length = 1446 Score = 42.1 bits (21), Expect = 6.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1621 ttgcatatttttcttgagaaa 1641 ||||||||||||||||||||| Sbjct: 355 ttgcatatttttcttgagaaa 335 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 311,233,384 Number of extensions: 16215355 Number of successful extensions: 347797 Number of sequences better than 10.0: 189 Number of HSP's gapped: 347787 Number of HSP's successfully gapped: 346 Length of query: 1689 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1666 Effective length of database: 18,503,978,556 Effective search space: 30827628274296 Effective search space used: 30827628274296 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
