ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf29b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054830.1| Oryza sativa (japonica cultivar-group) Os02g0778400 (Os02g0778400) mRNA, complete cds Length = 1134 Score = 440 bits (222), Expect = e-120 Identities = 476/558 (85%), Gaps = 2/558 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 153 atgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtggaaag 212 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| ||||| || || || ||||||| ||||||||||||||||| Sbjct: 213 ggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctggagac 272 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| ||||| ||||| |||||||| ||||| ||||| || | ||| ||| Sbjct: 273 cttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacatgata 332 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| || || ||||||||||||||| |||| |||| |||||||| ||||| ||||| Sbjct: 333 aaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccatgatt 392 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 ||||||| |||| | || ||||| |||||||||||||||||||| |||| || ||| || Sbjct: 393 aaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcgtgct 452 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | |||||||||| |||| ||||||| ||||| ||||||||||||||| || |||||||| Sbjct: 453 g-catttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttctga 511 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 ||||||||||| |||||||||| |||| || ||||||||| ||| ||||||||||||||| Sbjct: 512 ggaagagatggaaagacgtcttttgggacgcaatcagggaagagttgacgataacattga 571 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||||||||| ||||| |||| |||||||| ||||| ||||||||||| || ||||||| Sbjct: 572 gactatcaggaaaaggttcaaagtttttgttgaatccagtttgcctgtcattgagtacta 631 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | | |||| ||||||||| |||||| |||||||||||||||| |||||||||||||| Sbjct: 632 taatgcaaaggacaaggttaaaaagattgatgctgcaaaaccaattcctgaggtgtttga 691 Query: 769 agatgtgaaaaccatttt 786 |||||| ||| ||||||| Sbjct: 692 agatgtcaaagccatttt 709
>dbj|AK103372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127A22, full insert sequence Length = 1134 Score = 424 bits (214), Expect = e-115 Identities = 475/558 (85%), Gaps = 3/558 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 154 atgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtggaaag 213 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| ||||| || || || ||||||| ||||||||||||||||| Sbjct: 214 ggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctggagac 273 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| ||||| ||||| |||||||| ||||| ||||| || | ||| ||| Sbjct: 274 cttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacatgata 333 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| || || ||||||||||||||| |||| |||| |||||||| ||||| ||||| Sbjct: 334 aaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccatgatt 393 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 ||||||| |||| | || ||||| |||||||||||||||||||| |||| || ||| || Sbjct: 394 aaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcgtgct 453 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | |||||||||| |||| ||||||| ||||| ||||||||||||||| || |||||||| Sbjct: 454 g-catttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttctga 512 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 ||||||||||| |||||||||| |||| || ||||||||| ||| ||||||||||||||| Sbjct: 513 ggaagagatggaaagacgtcttttgggacgcaatcagggaagagttgacgataacattga 572 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||||||||| ||||| |||| |||||||| |||| ||||||||||| || ||||||| Sbjct: 573 gactatcaggaaaaggttcaaagtttttg-ttaatccagtttgcctgtcattgagtacta 631 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | | |||| ||||||||| |||||| |||||||||||||||| |||||||||||||| Sbjct: 632 taatgcaaaggacaaggttaaaaagattgatgctgcaaaaccaattcctgaggtgtttga 691 Query: 769 agatgtgaaaaccatttt 786 |||||| ||| ||||||| Sbjct: 692 agatgtcaaagccatttt 709
>emb|CT831543.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220I12, full insert sequence Length = 1154 Score = 377 bits (190), Expect = e-101 Identities = 463/554 (83%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 ||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 233 atgttgggtggcaagaaagttaaaattatatttgttctaggtggtcctggaagtggaaaa 292 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || || || || ||||||||||| |||||||| || || | |||||||| ||||| || Sbjct: 293 ggaactcagtgcagcaatattgtagagcattttggttttatccatcttagcgctggtgaa 352 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||||||||| |||||||| ||||| |||||||||||||||| || ||| Sbjct: 353 ctcttgcgtgcagaaatcaattctggttcagagaacggaaccatgattgacactatcata 412 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 | |||||||||||| || ||||||||||||||| ||||||| ||||||||||| || ||| Sbjct: 413 acggaagggaaaatcgtcccatctgagataaccataaagcttttgcaagaagccataata 472 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgtctg 529 ||| ||| |||| |||| | ||||||||||||||||| |||| |||| || ||| | Sbjct: 473 aaaggtggaaatgacaagtatatcattgatggatttccacggaacgaagagaatcgtgtt 532 Query: 530 tcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctgag 589 |||||||| |||||||| ||| |||||| ||||| ||||| || || ||||||||| Sbjct: 533 gtatttgagagtgttataagcatatctcctgaatttgttctatttttcgattgttctgag 592 Query: 590 gaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattgag 649 ||||| |||| ||| || ||| ||||||| || |||||| || ||| |||||||||||| Sbjct: 593 gaagaaatggaaaggcgccttttgggtcgcaaccagggaagaagtgatgataacattgag 652 Query: 650 actatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtactat 709 |||||||| |||||||| | |||||||| |||||| || |||||||| || |||| ||| Sbjct: 653 actatcaggaaaagattgaaagtttttgtagaatccagcttgcctgtcattgagtattat 712 Query: 710 gactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttgaa 769 || || || |||| ||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 713 gagtcaaaaggcatggttaagaagattgatgcgacaaaaccagcccctgaggtgtttgaa 772 Query: 770 gatgtgaaaaccat 783 ||||||||| |||| Sbjct: 773 gatgtgaaagccat 786
>gb|BT017816.1| Zea mays clone EL01N0507E06.c mRNA sequence Length = 1311 Score = 377 bits (190), Expect = e-101 Identities = 466/558 (83%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 194 atgttgggtggtaagaaagttacagctgtatttgttctaggtggtcctggaagtggaaaa 253 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 254 ggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctggagat 313 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| | || || || ||||| ||||||||||||||||||||||| | ||| ||| Sbjct: 314 cttttgcgtgctgagattaaatctggctctgagaatggaaccatgattgaaaacatgata 373 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| || || ||||||||||| ||| | || ||||||| ||||| || || |||||| Sbjct: 374 aaggagggaaagattgttccatcagaggtgactataaagctgttgcaggaggcaatgata 433 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgtctg 529 |||| ||||||| |||||||||| || || ||||||||||||||| | || || ||| Sbjct: 434 aaaaatgaaaatgacaaattcctgatcgacggatttccaaggaatgaggagaatcgtgca 493 Query: 530 tcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctgag 589 ||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 494 gcatttgagaatgttaccaaaatttctcctgcatttgtgctattctttgactgttctgag 553 Query: 590 gaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattgag 649 ||||||||| | |||||| |||| || ||||||||| ||| ||| ||||||||||| Sbjct: 554 aaagagatggagaaacgtctcttggggcgcaatcagggaagagttgatgataacattgaa 613 Query: 650 actatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtactat 709 ||||||| |||||| |||| | |||| || |||||||||||||| || || | || Sbjct: 614 actatcaaaaaaaggttcaaaacctttgttgagtcaagtttgcctgtcattgagcattac 673 Query: 710 gactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttgaa 769 |||| | || ||||||||| |||||| |||||||||||||||| ||||||||||||||| Sbjct: 674 aactcaagggacaaggttaaaaagattgatgctgcaaaaccaattcctgaggtgtttgaa 733 Query: 770 gatgtgaaaaccattttt 787 || || |||||||||||| Sbjct: 734 gacgtcaaaaccattttt 751
>gb|AY105887.1| Zea mays PCO123975 mRNA sequence Length = 1471 Score = 345 bits (174), Expect = 2e-91 Identities = 462/558 (82%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 427 atgttgggtggcaagaaagttacagttgtatttgtcctaggtggtcctggaagtggaaaa 486 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| || |||||||| || |||||||| ||||||||||||||||| Sbjct: 487 ggcacacagtgtgccaacatcgtggagcactttggattcacccatcttagtgctggagat 546 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || |||| |||| || || ||||| |||||||| |||||||||||||| | ||| ||| Sbjct: 547 cttctgcgtgcagagattaaatctggctctgagaacggaaccatgattgagaacatgata 606 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| || || ||||||||||| ||| | || ||||||| ||||| || || |||||| Sbjct: 607 aaggagggaaagattgttccatcggaggtgactataaagcttttgcaggaggcaatgata 666 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgtctg 529 |||||||||||| |||||||||| || |||||||||||||||||| | || || ||| Sbjct: 667 aaaagtgaaaatgacaaattcctgatcgatggatttccaaggaatgaggagaatcgtgca 726 Query: 530 tcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctgag 589 | ||||||||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct: 727 gcctttgagaatgttaccaaaatttctcctgcatttgtgctattctttgactgttctgaa 786 Query: 590 gaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattgag 649 ||||| |||| | ||| || ||||| || ||||||||| | | ||| ||||||||||| Sbjct: 787 gaagatatggagaaacgactcctggggcgcaatcagggaagggttgatgataacattgaa 846 Query: 650 actatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtactat 709 ||||||| |||||| |||| | |||| || |||| | ||||||| || || | || Sbjct: 847 actatcaaaaaaaggttcaaaacctttgttgactcaactctgcctgtcattgagcattac 906 Query: 710 gactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttgaa 769 |||| |||| ||||||||| |||||| ||||||||||||||||||| |||||||||||| Sbjct: 907 aactcaaaggacaaggttaaaaagattgatgctgcaaaaccaatccccgaggtgtttgaa 966 Query: 770 gatgtgaaaaccattttt 787 || || ||| |||||||| Sbjct: 967 gacgtcaaagccattttt 984
>emb|CT832063.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA051M08, full insert sequence Length = 1143 Score = 339 bits (171), Expect = 1e-89 Identities = 464/559 (83%), Gaps = 2/559 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 201 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 260 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| || | ||||||||||| Sbjct: 261 ggcacacagtgtgccaacattgtggaacactttggattcacccacttaagtgctggagac 320 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| || || |||||||||||||||||||| |||||||| | ||| ||| Sbjct: 321 cttttgcgtgcagagataaaatctggttctgagaatggaactatgattgagaacatgata 380 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| ||||| |||||||| || ||| | || |||||||||||||||| || ||||| Sbjct: 381 aaggaggggaagattgttccgtcagaggttactataaagctcttgcaagatgccatgatt 440 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 |||| ||| ||| | || || || || ||||| || ||||||||| |||| || ||| || Sbjct: 441 aaaaatgagaatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgct 500 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | | || |||||||||| |||||| |||| ||||||||||| |||||||||||||| Sbjct: 501 g-ccttcgagaatgttacaaaaatttcccctgcatttgtgctattttttgactgttctga 559 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 |||||||||| |||||||||| |||| || |||||||| ||| ||| || |||||||| Sbjct: 560 agaagagatggaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattga 619 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||| || || |||||||||| |||||||| |||||||||||||||||| || || |||| Sbjct: 620 gaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcacta 679 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | |||| ||| ||||| |||||| |||||||||||||||| |||| |||||||| Sbjct: 680 caatgcgaaggacaaagttaaaaagattgatgctgcaaaaccaatttctgaagtgtttga 739 Query: 769 agatgtgaaaaccattttt 787 |||||| ||| |||||||| Sbjct: 740 agatgtcaaagccattttt 758
>ref|NM_001066862.1| Oryza sativa (japonica cultivar-group) Os07g0624700 (Os07g0624700) mRNA, complete cds Length = 1140 Score = 331 bits (167), Expect = 3e-87 Identities = 463/559 (82%), Gaps = 2/559 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 198 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 257 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| || | ||||||||||| Sbjct: 258 ggcacacagtgtgccaacattgtggaacactttggattcacccacttaagtgctggagac 317 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| || || |||||||||||||||||||| |||||||| | ||| ||| Sbjct: 318 cttttgcgtgcagagataaaatctggttctgagaatggaactatgattgagaacatgata 377 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| ||||| |||||||| || ||| | || |||||||||||||||| || ||||| Sbjct: 378 aaggaggggaagattgttccgtcagaggttactataaagctcttgcaagatgccatgatt 437 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 |||| ||| ||| | || || || || ||||| || ||||||||| |||| || ||| || Sbjct: 438 aaaaatgagaatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgct 497 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | | || |||||||||| |||||| |||| ||||||||||| |||||||||||||| Sbjct: 498 g-ccttcgagaatgttacaaaaatttcccctgcatttgtgctattttttgactgttctga 556 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 |||||||||| |||||||||| |||| || |||||||| ||| ||| || |||||||| Sbjct: 557 agaagagatggaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattga 616 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||| || || |||||||||| |||||||| |||||||||||||||||| || || |||| Sbjct: 617 gaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcacta 676 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | ||| ||| ||||| |||||| |||||||||||||||| |||| |||||||| Sbjct: 677 caatgcgaagaacaaagttaaaaagattgatgctgcaaaaccaatttctgaagtgtttga 736 Query: 769 agatgtgaaaaccattttt 787 |||||| ||| |||||||| Sbjct: 737 agatgtcaaagccattttt 755
>gb|AF187062.1|AF187062 Oryza sativa UMP/CMP kinase a (ura6) mRNA, complete cds Length = 1148 Score = 331 bits (167), Expect = 3e-87 Identities = 463/559 (82%), Gaps = 2/559 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 191 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 250 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| || | ||||||||||| Sbjct: 251 ggcacacagtgtgccaacattgtggaacactttggattcacccacttaagtgctggagac 310 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| || || |||||||||||||||||||| |||||||| | ||| ||| Sbjct: 311 cttttgcgtgcagagataaaatctggttctgagaatggaactatgattgagaacatgata 370 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| ||||| |||||||| || ||| | || |||||||||||||||| || ||||| Sbjct: 371 aaggaggggaagattgttccgtcagaggttactataaagctcttgcaagatgccatgatt 430 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 |||| ||| ||| | || || || || ||||| || ||||||||| |||| || ||| || Sbjct: 431 aaaaatgagaatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgct 490 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | | || |||||||||| |||||| |||| ||||||||||| |||||||||||||| Sbjct: 491 g-ccttcgagaatgttacaaaaatttcccctgcatttgtgctattttttgactgttctga 549 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 |||||||||| |||||||||| |||| || |||||||| ||| ||| || |||||||| Sbjct: 550 agaagagatggaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattga 609 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||| || || |||||||||| |||||||| |||||||||||||||||| || || |||| Sbjct: 610 gaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcacta 669 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | ||| ||| ||||| |||||| |||||||||||||||| |||| |||||||| Sbjct: 670 caatgcgaagaacaaagttaaaaagattgatgctgcaaaaccaatttctgaagtgtttga 729 Query: 769 agatgtgaaaaccattttt 787 |||||| ||| |||||||| Sbjct: 730 agatgtcaaagccattttt 748
>gb|AF187063.1|AF187063 Oryza sativa UMP/CMP kinase b (ura6) mRNA, complete cds Length = 1203 Score = 323 bits (163), Expect = 8e-85 Identities = 462/559 (82%), Gaps = 2/559 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 198 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 257 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| || | ||||||||||| Sbjct: 258 ggcacacagtgtgccaacattgtggaacactttggattcacccacttaagtgctggagac 317 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| || || |||||||||||||||||||| |||||||| | ||| ||| Sbjct: 318 cttttgcgtgcagagataaaatctggttctgagaatggaactatgattgagaacatgata 377 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| ||||| |||||||| || ||| | || |||||||||||||||| || ||||| Sbjct: 378 aaggaggggaagattgttccgtcagaggttactataaagctcttgcaagatgccatgatt 437 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 |||| ||| ||| | || || || || ||||| || ||||||||| |||| || ||| || Sbjct: 438 aaaaatgagaatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgct 497 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | | || |||||||||| |||||| |||| ||||||||||| |||||||||||||| Sbjct: 498 g-ccttcgagaatgttacaaaaatttcccctgcatttgtgctattttttgactgttctga 556 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 |||||||||| |||||||||| |||| || |||||||| ||| ||| || |||||||| Sbjct: 557 agaagagatggaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattga 616 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||| || || |||||||||| |||||||| |||||||||||||||||| || || |||| Sbjct: 617 gaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcacta 676 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | ||| ||| ||||| |||||| ||||||||||| |||| |||| |||||||| Sbjct: 677 caatgcgaagaacaaagttaaaaagattgatgctgcaaaatcaatttctgaagtgtttga 736 Query: 769 agatgtgaaaaccattttt 787 |||||| ||| |||||||| Sbjct: 737 agatgtcaaagccattttt 755
>dbj|AK072973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K03, full insert sequence Length = 1048 Score = 321 bits (162), Expect = 3e-84 Identities = 452/546 (82%), Gaps = 2/546 (0%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 206 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 265 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || ||||| ||| ||| |||||||| || || |||||||| || | ||||||||||| Sbjct: 266 ggcacacagtgtgccaacattgtggaacactttggattcacccacttaagtgctggagac 325 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||| || || |||||||||||||||||||| |||||||| | ||| ||| Sbjct: 326 cttttgcgtgcagagataaaatctggttctgagaatggaactatgattgagaacatgata 385 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 ||||| ||||| |||||||| || ||| | || |||||||||||||||| || ||||| Sbjct: 386 aaggaggggaagattgttccgtcagaggttactataaagctcttgcaagatgccatgatt 445 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaatcaagaaaaccgt-ct 528 |||| ||| ||| | || || || || ||||| || ||||||||| |||| || ||| || Sbjct: 446 aaaaatgagaatgataagtttctaatcgatgggttcccaaggaatgaagagaatcgtgct 505 Query: 529 gtcatttgagaatgttataaaaatagttcctgagtttgtgctattctttgactgttctga 588 | | || |||||||||| |||||| |||| ||||||||||| |||||||||||||| Sbjct: 506 g-ccttcgagaatgttacaaaaatttcccctgcatttgtgctattttttgactgttctga 564 Query: 589 ggaagagatggtaagacgtcttctgggtcgaaatcagggacgagctgacgataacattga 648 |||||||||| |||||||||| |||| || |||||||| ||| ||| || |||||||| Sbjct: 565 agaagagatggaaagacgtcttttgggacgcaatcagggtagagttgatgacaacattga 624 Query: 649 gactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgtagttcagtacta 708 ||| || || |||||||||| |||||||| |||||||||||||||||| || || |||| Sbjct: 625 gaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgtaattgagcacta 684 Query: 709 tgactctaagggcaaggttaagaagattaatgctgcaaaaccaatccctgaggtgtttga 768 | | ||| ||| ||||| |||||| |||||||||||||||| |||| |||||||| Sbjct: 685 caatgcgaagaacaaagttaaaaagattgatgctgcaaaaccaatttctgaagtgtttga 744 Query: 769 agatgt 774 |||||| Sbjct: 745 agatgt 750
>ref|NM_001063620.1| Oryza sativa (japonica cultivar-group) Os06g0203500 (Os06g0203500) mRNA, complete cds Length = 1595 Score = 230 bits (116), Expect = 9e-57 Identities = 242/284 (85%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 ||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 205 atgttgggtggcaagaaagttaaaattatatttgttctaggtggtcctggaagtggaaaa 264 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || || || || ||||||||||| |||||||| || || | |||||||| ||||| || Sbjct: 265 ggaactcagtgcagcaatattgtagagcattttggttttatccatcttagcgctggtgaa 324 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||||||||| |||||||| ||||| |||||||||||||||| || ||| Sbjct: 325 ctcttgcgtgcagaaatcaattctggttcagagaacggaaccatgattgacactatcata 384 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 | |||||||||||| || ||||||||||||||| ||||||| ||||||||||| || ||| Sbjct: 385 acggaagggaaaatcgtcccatctgagataaccataaagcttttgcaagaagccataata 444 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaa 513 ||| ||| |||| |||| | ||||||||||||||||| |||| Sbjct: 445 aaaggtggaaatgacaagtatatcattgatggatttccacggaa 488 Score = 167 bits (84), Expect = 1e-37 Identities = 192/228 (84%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 |||||| ||||| ||||| || || |||||||||||||| |||| ||| || ||| |||| Sbjct: 661 tcctgaatttgttctatttttcgattgttctgaggaagaaatggaaaggcgccttttggg 720 Query: 616 tcgaaatcagggacgagctgacgataacattgagactatcagaaaaagattcagagtttt 675 ||| || |||||| || ||| |||||||||||||||||||| |||||||| | |||||| Sbjct: 721 tcgcaaccagggaagaagtgatgataacattgagactatcaggaaaagattgaaagtttt 780 Query: 676 tgaagaatcaagtttgcctgtagttcagtactatgactctaagggcaaggttaagaagat 735 || |||||| || |||||||| || |||| ||||| || || |||| |||||||||||| Sbjct: 781 tgtagaatccagcttgcctgtcattgagtattatgagtcaaaaggcatggttaagaagat 840 Query: 736 taatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccat 783 | |||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 841 tgatgcgacaaaaccagcccctgaggtgtttgaagatgtgaaagccat 888
>dbj|AK106691.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C08, full insert sequence Length = 1595 Score = 230 bits (116), Expect = 9e-57 Identities = 242/284 (85%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 ||||||||||| ||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 205 atgttgggtggcaagaaagttaaaattatatttgttctaggtggtcctggaagtggaaaa 264 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcacacatcttagtgctggagag 349 || || || || ||||||||||| |||||||| || || | |||||||| ||||| || Sbjct: 265 ggaactcagtgcagcaatattgtagagcattttggttttatccatcttagcgctggtgaa 324 Query: 350 ctgttgcgctcagaaatcaagtctggttctgagaatggaaccatgattgacagcattata 409 || ||||| |||||||||| |||||||| ||||| |||||||||||||||| || ||| Sbjct: 325 ctcttgcgtgcagaaatcaattctggttcagagaacggaaccatgattgacactatcata 384 Query: 410 aaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatgata 469 | |||||||||||| || ||||||||||||||| ||||||| ||||||||||| || ||| Sbjct: 385 acggaagggaaaatcgtcccatctgagataaccataaagcttttgcaagaagccataata 444 Query: 470 aaaagtgaaaataacaaattcctcattgatggatttccaaggaa 513 ||| ||| |||| |||| | ||||||||||||||||| |||| Sbjct: 445 aaaggtggaaatgacaagtatatcattgatggatttccacggaa 488 Score = 167 bits (84), Expect = 1e-37 Identities = 192/228 (84%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 |||||| ||||| ||||| || || |||||||||||||| |||| ||| || ||| |||| Sbjct: 661 tcctgaatttgttctatttttcgattgttctgaggaagaaatggaaaggcgccttttggg 720 Query: 616 tcgaaatcagggacgagctgacgataacattgagactatcagaaaaagattcagagtttt 675 ||| || |||||| || ||| |||||||||||||||||||| |||||||| | |||||| Sbjct: 721 tcgcaaccagggaagaagtgatgataacattgagactatcaggaaaagattgaaagtttt 780 Query: 676 tgaagaatcaagtttgcctgtagttcagtactatgactctaagggcaaggttaagaagat 735 || |||||| || |||||||| || |||| ||||| || || |||| |||||||||||| Sbjct: 781 tgtagaatccagcttgcctgtcattgagtattatgagtcaaaaggcatggttaagaagat 840 Query: 736 taatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccat 783 | |||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 841 tgatgcgacaaaaccagcccctgaggtgtttgaagatgtgaaagccat 888
>emb|CT828556.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA032C07, full insert sequence Length = 630 Score = 113 bits (57), Expect = 1e-21 Identities = 90/101 (89%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaa 289 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 205 atgttgggtgataagaaagttacagttgtatttgttctaggtggtcctggaagtggaaaa 264 Query: 290 ggtacacaatgtagcaatattgtggagcatttcggattcac 330 || ||||| ||| ||| |||||||| || || |||||||| Sbjct: 265 ggcacacagtgtgccaacattgtggaacactttggattcac 305
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 109 bits (55), Expect = 2e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 387 gaaccatgattgacagcattataaaggaagggaaaattgttccatctgagataaccgtaa 446 ||||||||||||||| || |||| |||||||||||| || ||||||||||||||| ||| Sbjct: 5233745 gaaccatgattgacactatcataacggaagggaaaatcgtcccatctgagataaccataa 5233804 Query: 447 agctcttgcaagaagctatgataaaaagtgaaaataacaaattcctcattgatggatttc 506 |||| ||||||||||| || |||||| ||| |||| |||| | ||||||||||||||| Sbjct: 5233805 agcttttgcaagaagccataataaaaggtggaaatgacaagtatatcattgatggatttc 5233864 Query: 507 caaggaa 513 || |||| Sbjct: 5233865 cacggaa 5233871 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 268 aggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggatt 327 |||||||||||||||||||||||| || || || ||||||||||| |||||||| || || Sbjct: 5233541 aggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggttt 5233600 Query: 328 cacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaa 384 | |||||||| ||||| || || ||||| |||||||||| |||||||| ||||| Sbjct: 5233601 tatccatcttagcgctggtgaactcttgcgtgcagaaatcaattctggttcagagaa 5233657 Score = 79.8 bits (40), Expect = 2e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 638 gataacattgagactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgta 697 |||||||||||||||||||| |||||||| | |||||||| |||||| || |||||||| Sbjct: 5234225 gataacattgagactatcaggaaaagattgaaagtttttgtagaatccagcttgcctgtc 5234284 Query: 698 gttcagtactatgactctaagggcaaggttaagaag 733 || |||| ||||| || || |||| |||||||||| Sbjct: 5234285 attgagtattatgagtcaaaaggcatggttaagaag 5234320 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 744 caaaaccaatccctgaggtgtttgaagatgtgaaaaccat 783 |||||||| ||||||||||||||||||||||||| |||| Sbjct: 5235064 caaaaccagcccctgaggtgtttgaagatgtgaaagccat 5235103 Score = 46.1 bits (23), Expect = 0.28 Identities = 53/63 (84%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 |||||| ||||| ||||| || || |||||||||||||| |||| ||| || ||| |||| Sbjct: 5234044 tcctgaatttgttctatttttcgattgttctgaggaagaaatggaaaggcgccttttggg 5234103 Query: 616 tcg 618 ||| Sbjct: 5234104 tcg 5234106 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 ||||||||||| ||||||||| | || |||||||||||||| Sbjct: 5233344 atgttgggtggcaagaaagttaaaattatatttgttctaggt 5233385
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 109 bits (55), Expect = 2e-20 Identities = 109/127 (85%) Strand = Plus / Plus Query: 387 gaaccatgattgacagcattataaaggaagggaaaattgttccatctgagataaccgtaa 446 ||||||||||||||| || |||| |||||||||||| || ||||||||||||||| ||| Sbjct: 100467 gaaccatgattgacactatcataacggaagggaaaatcgtcccatctgagataaccataa 100526 Query: 447 agctcttgcaagaagctatgataaaaagtgaaaataacaaattcctcattgatggatttc 506 |||| ||||||||||| || |||||| ||| |||| |||| | ||||||||||||||| Sbjct: 100527 agcttttgcaagaagccataataaaaggtggaaatgacaagtatatcattgatggatttc 100586 Query: 507 caaggaa 513 || |||| Sbjct: 100587 cacggaa 100593 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 268 aggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggatt 327 |||||||||||||||||||||||| || || || ||||||||||| |||||||| || || Sbjct: 100263 aggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggttt 100322 Query: 328 cacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaa 384 | |||||||| ||||| || || ||||| |||||||||| |||||||| ||||| Sbjct: 100323 tatccatcttagcgctggtgaactcttgcgtgcagaaatcaattctggttcagagaa 100379 Score = 79.8 bits (40), Expect = 2e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 638 gataacattgagactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgta 697 |||||||||||||||||||| |||||||| | |||||||| |||||| || |||||||| Sbjct: 100947 gataacattgagactatcaggaaaagattgaaagtttttgtagaatccagcttgcctgtc 101006 Query: 698 gttcagtactatgactctaagggcaaggttaagaag 733 || |||| ||||| || || |||| |||||||||| Sbjct: 101007 attgagtattatgagtcaaaaggcatggttaagaag 101042 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 744 caaaaccaatccctgaggtgtttgaagatgtgaaaaccat 783 |||||||| ||||||||||||||||||||||||| |||| Sbjct: 101786 caaaaccagcccctgaggtgtttgaagatgtgaaagccat 101825 Score = 46.1 bits (23), Expect = 0.28 Identities = 53/63 (84%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 |||||| ||||| ||||| || || |||||||||||||| |||| ||| || ||| |||| Sbjct: 100766 tcctgaatttgttctatttttcgattgttctgaggaagaaatggaaaggcgccttttggg 100825 Query: 616 tcg 618 ||| Sbjct: 100826 tcg 100828 Score = 44.1 bits (22), Expect = 1.1 Identities = 37/42 (88%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 ||||||||||| ||||||||| | || |||||||||||||| Sbjct: 100066 atgttgggtggcaagaaagttaaaattatatttgttctaggt 100107
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 93.7 bits (47), Expect = 1e-15 Identities = 92/107 (85%) Strand = Plus / Plus Query: 407 ataaaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatg 466 |||||||| || || ||||||||||||||| |||| |||| |||||||| ||||| ||| Sbjct: 32971586 ataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccatg 32971645 Query: 467 ataaaaagtgaaaataacaaattcctcattgatggatttccaaggaa 513 || ||||||| |||| | || ||||| |||||||||||||||||||| Sbjct: 32971646 attaaaagtggaaatgataagttccttattgatggatttccaaggaa 32971692 Score = 87.7 bits (44), Expect = 8e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 547 aaaaatagttcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacg 606 ||||||| ||||| ||||||||||||||| || ||||||||||||||||||| |||||| Sbjct: 32971892 aaaaataactcctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacg 32971951 Query: 607 tcttctgggtcgaaatcagg 626 |||| |||| || ||||||| Sbjct: 32971952 tcttttgggacgcaatcagg 32971971 Score = 85.7 bits (43), Expect = 3e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaagattcagagtttttgaagaa 682 |||||| ||| |||||||||||||||||||||||| ||||| |||| |||||||| ||| Sbjct: 32972071 cagggaagagttgacgataacattgagactatcaggaaaaggttcaaagtttttgttgaa 32972130 Query: 683 tcaagtttgcctgtagttcagtactat 709 || ||||||||||| || |||||||| Sbjct: 32972131 tccagtttgcctgtcattgagtactat 32972157 Score = 77.8 bits (39), Expect = 8e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccatttt 786 ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||| Sbjct: 32972430 agattgatgctgcaaaaccaattcctgaggtgtttgaagatgtcaaagccatttt 32972484 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 268 aggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggatt 327 |||||||||||| |||||||| || ||||| ||| ||| ||||| || || || ||||| Sbjct: 32971298 aggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggatt 32971357 Query: 328 cacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaa 384 || ||||||||||||||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 32971358 cattcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 32971414 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 32971074 atgttgggtgacaagaaagttacagttgtatttgttctaggt 32971115 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 cctctcgccgccgtcgccgtcaccgcc 48 ||||||||||||||||||||| ||||| Sbjct: 6082423 cctctcgccgccgtcgccgtcgccgcc 6082449 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 32292485 cggcccctccctctccgtcctcctcc 32292460 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgccgccgtcgccgtcaccgccgacctcc 55 |||||||||||||||| |||||| ||||| Sbjct: 34939105 cgccgccgtcgccgtcgccgccgccctcc 34939133
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 93.7 bits (47), Expect = 1e-15 Identities = 92/107 (85%) Strand = Plus / Plus Query: 407 ataaaggaagggaaaattgttccatctgagataaccgtaaagctcttgcaagaagctatg 466 |||||||| || || ||||||||||||||| |||| |||| |||||||| ||||| ||| Sbjct: 17526 ataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccatg 17585 Query: 467 ataaaaagtgaaaataacaaattcctcattgatggatttccaaggaa 513 || ||||||| |||| | || ||||| |||||||||||||||||||| Sbjct: 17586 attaaaagtggaaatgataagttccttattgatggatttccaaggaa 17632 Score = 87.7 bits (44), Expect = 8e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 547 aaaaatagttcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacg 606 ||||||| ||||| ||||||||||||||| || ||||||||||||||||||| |||||| Sbjct: 17832 aaaaataactcctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacg 17891 Query: 607 tcttctgggtcgaaatcagg 626 |||| |||| || ||||||| Sbjct: 17892 tcttttgggacgcaatcagg 17911 Score = 85.7 bits (43), Expect = 3e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaagattcagagtttttgaagaa 682 |||||| ||| |||||||||||||||||||||||| ||||| |||| |||||||| ||| Sbjct: 18011 cagggaagagttgacgataacattgagactatcaggaaaaggttcaaagtttttgttgaa 18070 Query: 683 tcaagtttgcctgtagttcagtactat 709 || ||||||||||| || |||||||| Sbjct: 18071 tccagtttgcctgtcattgagtactat 18097 Score = 77.8 bits (39), Expect = 8e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccatttt 786 ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||| Sbjct: 18370 agattgatgctgcaaaaccaattcctgaggtgtttgaagatgtcaaagccatttt 18424 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 268 aggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggatt 327 |||||||||||| |||||||| || ||||| ||| ||| ||||| || || || ||||| Sbjct: 17238 aggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggatt 17297 Query: 328 cacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaa 384 || ||||||||||||||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 17298 cattcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 17354 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 17014 atgttgggtgacaagaaagttacagttgtatttgttctaggt 17055
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 89.7 bits (45), Expect = 2e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 267 taggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggat 326 ||||||||||||||||||||||||| ||||| ||| ||| |||||||| || || |||| Sbjct: 25827180 taggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggat 25827121 Query: 327 tcacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaatg 386 |||| || | ||||||||||| || ||||| |||| || || |||||||||||||||| Sbjct: 25827120 tcacccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatg 25827061 Query: 387 g 387 | Sbjct: 25827060 g 25827060 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 563 tttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaat 622 ||||||||||| |||||||||||||| |||||||||| |||||||||| |||| || ||| Sbjct: 25826617 tttgtgctattttttgactgttctgaagaagagatggaaagacgtcttttgggacgcaat 25826558 Query: 623 cagg 626 |||| Sbjct: 25826557 cagg 25826554 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 641 aacattgagactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgta 697 ||||||||||| || || |||||||||| |||||||| |||||||||||||||||| Sbjct: 25826458 aacattgagaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgta 25826402 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| |||| |||||||||||||| ||| |||||||| Sbjct: 25826241 agattgatgctgcaaaaccaatttctgaagtgtttgaagatgtcaaagccattttt 25826186 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 25827324 atgttgggtgataagaaagttacagttgtatttgttctaggt 25827283 Score = 58.0 bits (29), Expect = 7e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 387 gaaccatgattgacagcattataaaggaagggaaaattgttccatctgagataaccgtaa 446 |||| |||||||| | ||| |||||||| ||||| |||||||| || ||| | || ||| Sbjct: 25826952 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 25826893 Query: 447 agctcttgcaagaagctatgataaaaagtgaaaataacaaattcctcattgatggatttc 506 ||||||||||||| || ||||| |||| ||| ||| | || || || || ||||| || | Sbjct: 25826892 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 25826833 Query: 507 caaggaatcaaga 519 |||||||| |||| Sbjct: 25826832 caaggaatgaaga 25826820
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 89.7 bits (45), Expect = 2e-14 Identities = 102/121 (84%) Strand = Plus / Minus Query: 267 taggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggat 326 ||||||||||||||||||||||||| ||||| ||| ||| |||||||| || || |||| Sbjct: 144342 taggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggat 144283 Query: 327 tcacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaatg 386 |||| || | ||||||||||| || ||||| |||| || || |||||||||||||||| Sbjct: 144282 tcacccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatg 144223 Query: 387 g 387 | Sbjct: 144222 g 144222 Score = 79.8 bits (40), Expect = 2e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 563 tttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaat 622 ||||||||||| |||||||||||||| |||||||||| |||||||||| |||| || ||| Sbjct: 143779 tttgtgctattttttgactgttctgaagaagagatggaaagacgtcttttgggacgcaat 143720 Query: 623 cagg 626 |||| Sbjct: 143719 cagg 143716 Score = 65.9 bits (33), Expect = 3e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 641 aacattgagactatcagaaaaagattcagagtttttgaagaatcaagtttgcctgta 697 ||||||||||| || || |||||||||| |||||||| |||||||||||||||||| Sbjct: 143620 aacattgagaccattaggaaaagattcaaagtttttgttgaatcaagtttgcctgta 143564 Score = 63.9 bits (32), Expect = 1e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| |||| |||||||||||||| ||| |||||||| Sbjct: 143403 agattgatgctgcaaaaccaatttctgaagtgtttgaagatgtcaaagccattttt 143348 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 144486 atgttgggtgataagaaagttacagttgtatttgttctaggt 144445 Score = 58.0 bits (29), Expect = 7e-05 Identities = 107/133 (80%) Strand = Plus / Minus Query: 387 gaaccatgattgacagcattataaaggaagggaaaattgttccatctgagataaccgtaa 446 |||| |||||||| | ||| |||||||| ||||| |||||||| || ||| | || ||| Sbjct: 144114 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 144055 Query: 447 agctcttgcaagaagctatgataaaaagtgaaaataacaaattcctcattgatggatttc 506 ||||||||||||| || ||||| |||| ||| ||| | || || || || ||||| || | Sbjct: 144054 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 143995 Query: 507 caaggaatcaaga 519 |||||||| |||| Sbjct: 143994 caaggaatgaaga 143982
>gb|DQ430579.1| Sorghum propinquum locus S02089 genomic sequence Length = 737 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 626 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 681 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430578.1| Sorghum bicolor voucher PI585454 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430577.1| Sorghum bicolor voucher PI267539 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430576.1| Sorghum bicolor voucher PI267408 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430575.1| Sorghum bicolor voucher PI221607 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430574.1| Sorghum bicolor voucher PI152702 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430573.1| Sorghum bicolor voucher NSL87902b locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430572.1| Sorghum bicolor voucher NSL87902a locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430571.1| Sorghum bicolor voucher NSL87666 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430570.1| Sorghum bicolor voucher NSL77217 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430569.1| Sorghum bicolor voucher NSL77034 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430568.1| Sorghum bicolor voucher NSL56174 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430567.1| Sorghum bicolor voucher NSL56003 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430566.1| Sorghum bicolor voucher NSL55243 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430565.1| Sorghum bicolor voucher NSL51365 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430564.1| Sorghum bicolor voucher NSL51030 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430563.1| Sorghum bicolor voucher NSL50875 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>gb|DQ430562.1| Sorghum bicolor voucher BTx623 locus S02089 genomic sequence Length = 725 Score = 85.7 bits (43), Expect = 3e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 556 tcctgagtttgtgctattctttgactgttctgaggaagagatggtaagacgtcttctggg 615 ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 114 tcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgtctcttggg 173 Query: 616 tcgaaatcagg 626 || ||||||| Sbjct: 174 ccgcaatcagg 184 Score = 71.9 bits (36), Expect = 5e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 732 agattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaaccattttt 787 ||||| |||||||||||||||| ||||||||||||||||| || ||| |||||||| Sbjct: 614 agattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaagccattttt 669 Score = 42.1 bits (21), Expect = 4.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 623 cagggacgagctgacgataacattgagactatcagaaaaag 663 |||||| ||| ||| ||||||||||| ||||||| |||||| Sbjct: 257 cagggaagagttgatgataacattgaaactatcaaaaaaag 297
>emb|CT983793.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 409 Score = 81.8 bits (41), Expect = 5e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 252 cagttgtatttgttctaggtggtcctggaagtggaaaaggtacacaatgtagcaatattg 311 ||||||| |||||| ||||||| ||||| |||||||| || || |||||| |||||||| Sbjct: 308 cagttgtttttgttttaggtggacctggcagtggaaagggcacgcaatgtgccaatattg 249 Query: 312 tggagcatttcggattcacacatcttagtgctggagagctgttgcgctcagaaatcaagt 371 | |||| || || ||||| ||||| |||||||| || || | || |||||||||| | Sbjct: 248 ttcagcactttggcttcacccatctcagtgctggtgatcttcttcgagcagaaatcaaat 189 Query: 372 ctggttctgagaatggaaccatgat 396 |||||||||| |||||||| ||||| Sbjct: 188 ctggttctgaaaatggaactatgat 164
>emb|CT981603.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 409 Score = 81.8 bits (41), Expect = 5e-12 Identities = 119/145 (82%) Strand = Plus / Minus Query: 252 cagttgtatttgttctaggtggtcctggaagtggaaaaggtacacaatgtagcaatattg 311 ||||||| |||||| ||||||| ||||| |||||||| || || |||||| |||||||| Sbjct: 308 cagttgtttttgttttaggtggacctggcagtggaaagggcacgcaatgtgccaatattg 249 Query: 312 tggagcatttcggattcacacatcttagtgctggagagctgttgcgctcagaaatcaagt 371 | |||| || || ||||| ||||| |||||||| || || | || |||||||||| | Sbjct: 248 ttcagcactttggcttcacccatctcagtgctggtgatcttcttcgagcagaaatcaaat 189 Query: 372 ctggttctgagaatggaaccatgat 396 |||||||||| |||||||| ||||| Sbjct: 188 ctggttctgaaaatggaactatgat 164
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 268 aggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggatt 327 |||||||||||| |||||||| || ||||| ||| ||| ||||| || || || ||||| Sbjct: 126039 aggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggatt 126098 Query: 328 cacacatcttagtgctggagagctgttgcgctcagaaatcaagtctggttctgagaa 384 || ||||||||||||||||| || ||||| |||| ||||| ||||| |||||||| Sbjct: 126099 cattcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 126155 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 230 atgttgggtgggaagaaagttgcagttgtatttgttctaggt 271 |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 125815 atgttgggtgacaagaaagttacagttgtatttgttctaggt 125856
>gb|BT029445.1| Arabidopsis thaliana At5g26667 mRNA, complete cds Length = 627 Score = 71.9 bits (36), Expect = 5e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 237 gtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaaggtacac 296 ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||| | Sbjct: 29 gtgggaagaaacctacagttatatttgttcttggtggtccaggaagtggaaaaggtaccc 88 Query: 297 aatgtagcaatattgtggagcatttcggattcacacatcttagtgctggaga 348 | ||| ||||||| || |||| || | ||||||||| ||||||||||| Sbjct: 89 agtgtgcttatattgttgaacattatggttacacacatctgagtgctggaga 140 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 714 ctaagggcaaggttaagaagattaatgctgcaaa 747 ||||||| || |||| |||||||||||||||||| Sbjct: 506 ctaaggggaaagttaggaagattaatgctgcaaa 539
>ref|NM_180536.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase (AT5G26667) mRNA, complete cds Length = 875 Score = 71.9 bits (36), Expect = 5e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 237 gtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaaggtacac 296 ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||| | Sbjct: 107 gtgggaagaaacctacagttatatttgttcttggtggtccaggaagtggaaaaggtaccc 166 Query: 297 aatgtagcaatattgtggagcatttcggattcacacatcttagtgctggaga 348 | ||| ||||||| || |||| || | ||||||||| ||||||||||| Sbjct: 167 agtgtgcttatattgttgaacattatggttacacacatctgagtgctggaga 218 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 714 ctaagggcaaggttaagaagattaatgctgcaaa 747 ||||||| || |||| |||||||||||||||||| Sbjct: 584 ctaaggggaaagttaggaagattaatgctgcaaa 617
>ref|NM_180537.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase (AT5G26667) mRNA, complete cds Length = 892 Score = 71.9 bits (36), Expect = 5e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 237 gtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaaggtacac 296 ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||| | Sbjct: 107 gtgggaagaaacctacagttatatttgttcttggtggtccaggaagtggaaaaggtaccc 166 Query: 297 aatgtagcaatattgtggagcatttcggattcacacatcttagtgctggaga 348 | ||| ||||||| || |||| || | ||||||||| ||||||||||| Sbjct: 167 agtgtgcttatattgttgaacattatggttacacacatctgagtgctggaga 218 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 714 ctaagggcaaggttaagaagattaatgctgcaaa 747 ||||||| || |||| |||||||||||||||||| Sbjct: 584 ctaaggggaaagttaggaagattaatgctgcaaa 617
>ref|NM_001036865.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase (AT5G26667) mRNA, complete cds Length = 1059 Score = 71.9 bits (36), Expect = 5e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 237 gtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaaggtacac 296 ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||| | Sbjct: 167 gtgggaagaaacctacagttatatttgttcttggtggtccaggaagtggaaaaggtaccc 226 Query: 297 aatgtagcaatattgtggagcatttcggattcacacatcttagtgctggaga 348 | ||| ||||||| || |||| || | ||||||||| ||||||||||| Sbjct: 227 agtgtgcttatattgttgaacattatggttacacacatctgagtgctggaga 278 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 714 ctaagggcaaggttaagaagattaatgctgcaaa 747 ||||||| || |||| |||||||||||||||||| Sbjct: 644 ctaaggggaaagttaggaagattaatgctgcaaa 677
>gb|AF000147.1|ATAF000147 Arabidopsis thaliana UMP/CMP kinase (pyr6) mRNA, complete cds Length = 895 Score = 71.9 bits (36), Expect = 5e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 237 gtgggaagaaagttgcagttgtatttgttctaggtggtcctggaagtggaaaaggtacac 296 ||||||||||| | ||||| |||||||||| |||||||| ||||||||||||||||| | Sbjct: 89 gtgggaagaaacctacagttatatttgttcttggtggtccaggaagtggaaaaggtaccc 148 Query: 297 aatgtagcaatattgtggagcatttcggattcacacatcttagtgctggaga 348 | ||| ||||||| || |||| || | ||||||||| ||||||||||| Sbjct: 149 agtgtgcttatattgttgaacattatggttacacacatctgagtgctggaga 200 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 714 ctaagggcaaggttaagaagattaatgctgcaaa 747 ||||||| || |||| |||||||||||||||||| Sbjct: 566 ctaaggggaaagttaggaagattaatgctgcaaa 599
>gb|AY110733.1| Zea mays CL12258_2 mRNA sequence Length = 580 Score = 67.9 bits (34), Expect = 8e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 733 gattaatgctgcaaaaccaatccctgaggtgtttgaagatgtgaaaacca 782 |||| |||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 529 gattgatgctgcaaaaccaattcctgaggtgtttgaagacgtcaaaacca 480
>ref|NM_118660.2| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor (AT4G25280) mRNA, complete cds Length = 883 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 259 atttgttctaggtggtcctggaagtggaaaaggtacacaatg 300 |||||| ||||| || |||||||||||||||||||||||||| Sbjct: 159 atttgtactagggggacctggaagtggaaaaggtacacaatg 200
>gb|BT011652.1| Arabidopsis thaliana At4g25280 mRNA, complete cds Length = 750 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 259 atttgttctaggtggtcctggaagtggaaaaggtacacaatg 300 |||||| ||||| || |||||||||||||||||||||||||| Sbjct: 138 atttgtactagggggacctggaagtggaaaaggtacacaatg 179
>gb|BT010930.1| Arabidopsis thaliana At4g25280 gene, complete cds Length = 870 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 259 atttgttctaggtggtcctggaagtggaaaaggtacacaatg 300 |||||| ||||| || |||||||||||||||||||||||||| Sbjct: 159 atttgtactagggggacctggaagtggaaaaggtacacaatg 200
>gb|AY110456.1| Zea mays CL15126_1 mRNA sequence Length = 912 Score = 58.0 bits (29), Expect = 7e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 572 ttctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaatcagggacga 631 |||||||||||| ||||||| |||||||| | ||| ||||| || || || ||||| || Sbjct: 387 ttctttgactgtcctgaggatgagatggttaaacgccttctaggccgtaaccaggggaga 328 Query: 632 gctgacgataacattgagactatca 656 | ||| |||||||||||||| |||| Sbjct: 327 gttgatgataacattgagacaatca 303 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Minus Query: 407 ataaaggaagggaaaattgttccatctgagataac 441 ||||||||||||| |||||||| ||||||||||| Sbjct: 552 ataaaggaagggaggattgttccgtctgagataac 518
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 267 taggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||||| Sbjct: 18759 taggtggtcctggaagtggaaaaggtac 18732
>emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3, BAC clone T2O9 Length = 90823 Score = 56.0 bits (28), Expect = 3e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 267 taggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||||| Sbjct: 81196 taggtggtcctggaagtggaaaaggtac 81169
>ref|NM_180395.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase (AT3G60180) mRNA, complete cds Length = 696 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 269 ggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||| Sbjct: 122 ggtggtcctggaagtggaaaaggtac 147
>ref|NM_115881.2| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase (AT3G60180) mRNA, complete cds Length = 844 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 269 ggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||| Sbjct: 122 ggtggtcctggaagtggaaaaggtac 147
>gb|AY223439.1| Schistosoma japonicum clone ZZZ442 mRNA sequence Length = 1100 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 260 tttgttctaggtggtcctggaagtggaaaaggtacacaatgt 301 |||||| ||||||| || ||||||||||||||||| |||||| Sbjct: 90 tttgttttaggtggaccaggaagtggaaaaggtactcaatgt 131
>gb|AY274582.1| Schistosoma japonicum adenylate kinase mRNA, complete cds Length = 696 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 260 tttgttctaggtggtcctggaagtggaaaaggtacacaatgt 301 |||||| ||||||| || ||||||||||||||||| |||||| Sbjct: 135 tttgttttaggtggaccaggaagtggaaaaggtactcaatgt 176
>gb|AY114727.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 655 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 269 ggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||| Sbjct: 82 ggtggtcctggaagtggaaaaggtac 107
>gb|AY072358.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 843 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 269 ggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||| Sbjct: 121 ggtggtcctggaagtggaaaaggtac 146
>gb|AY085667.1| Arabidopsis thaliana clone 16800 mRNA, complete sequence Length = 828 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 269 ggtggtcctggaagtggaaaaggtac 294 |||||||||||||||||||||||||| Sbjct: 122 ggtggtcctggaagtggaaaaggtac 147
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Minus Query: 275 cctggaagtggaaaaggtacacaatg 300 |||||||||||||||||||||||||| Sbjct: 22382 cctggaagtggaaaaggtacacaatg 22357
>emb|AL035396.1|ATF24A6 Arabidopsis thaliana DNA chromosome 4, BAC clone F24A6 (ESSAII project) Length = 92073 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Minus Query: 275 cctggaagtggaaaaggtacacaatg 300 |||||||||||||||||||||||||| Sbjct: 72570 cctggaagtggaaaaggtacacaatg 72545
>gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone T7I7, from chromosome 5, complete sequence Length = 22832 Score = 52.0 bits (26), Expect = 0.005 Identities = 68/82 (82%) Strand = Plus / Plus Query: 267 taggtggtcctggaagtggaaaaggtacacaatgtagcaatattgtggagcatttcggat 326 |||||||||| ||||||||||||||||| || ||| ||||||| || |||| || | Sbjct: 10854 taggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaacattatggtt 10913 Query: 327 tcacacatcttagtgctggaga 348 ||||||||| ||||||||||| Sbjct: 10914 acacacatctgagtgctggaga 10935
>dbj|AK146436.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730091B03 product:UMP-CMP kinase homolog, full insert sequence Length = 1801 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 372 aaattcttgattgatggatttccaagaaatcaagacaacc 411
>dbj|AK150162.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530140K15 product:UMP-CMP kinase homolog, full insert sequence Length = 860 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 396 aaattcttgattgatggatttccaagaaatcaagacaacc 435
>dbj|AK162173.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420445F24 product:UMP-CMP kinase homolog, full insert sequence Length = 1794 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 394 aaattcttgattgatggatttccaagaaatcaagacaacc 433
>dbj|AK161967.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430590A15 product:UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase) (Deoxycytidylate kinase) (Cytidine monophosphate kinase) homolog [Mus musculus], full insert sequence Length = 2729 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 33 aaattcttgattgatggatttccaagaaatcaagacaacc 72
>dbj|AK077534.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730439H01 product:UMP-CMP KINASE homolog [Homo sapiens], full insert sequence Length = 926 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 465 aaattcttgattgatggatttccaagaaatcaagacaacc 504
>dbj|AK002526.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011D08 product:UMP-CMP KINASE homolog [Homo sapiens], full insert sequence Length = 1772 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 369 aaattcttgattgatggatttccaagaaatcaagacaacc 408
>dbj|AK004827.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200019O24 product:UMP-CMP KINASE homolog [Homo sapiens], full insert sequence Length = 1743 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 339 aaattcttgattgatggatttccaagaaatcaagacaacc 378
>ref|NM_025647.2| Mus musculus cytidylate kinase (Cmpk), mRNA gb|BC017684.1| Mus musculus cytidylate kinase, mRNA (cDNA clone MGC:18911 IMAGE:4241782), complete cds Length = 1851 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Plus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 378 aaattcttgattgatggatttccaagaaatcaagacaacc 417
>emb|AL670035.15| Mouse DNA sequence from clone RP23-295C20 on chromosome 4, complete sequence Length = 201142 Score = 48.1 bits (24), Expect = 0.072 Identities = 36/40 (90%) Strand = Plus / Minus Query: 485 aaattcctcattgatggatttccaaggaatcaagaaaacc 524 |||||| | ||||||||||||||||| |||||||| |||| Sbjct: 74017 aaattcttgattgatggatttccaagaaatcaagacaacc 73978
>ref|NM_001061813.1| Oryza sativa (japonica cultivar-group) Os05g0351500 (Os05g0351500) mRNA, complete cds Length = 1235 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 ccgccgacctcctcccttcgccggcgc 70 |||||| |||||||||||||||||||| Sbjct: 148 ccgccgtcctcctcccttcgccggcgc 174
>ref|NM_001052795.1| Oryza sativa (japonica cultivar-group) Os02g0208600 (Os02g0208600) mRNA, partial cds Length = 3059 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 cctctcgccgccgtcgccgtcaccgcc 48 ||||||||||||||||||||| ||||| Sbjct: 208 cctctcgccgccgtcgccgtcgccgcc 234
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 ccgccgacctcctcccttcgccggcgc 70 |||||| |||||||||||||||||||| Sbjct: 130507 ccgccgtcctcctcccttcgccggcgc 130481
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 275 cctggaagtggaaaaggtacacaatgt 301 ||||| ||||||||||||||||||||| Sbjct: 111752 cctggtagtggaaaaggtacacaatgt 111778
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 44 ccgccgacctcctcccttcgccggcgc 70 |||||| |||||||||||||||||||| Sbjct: 16490070 ccgccgtcctcctcccttcgccggcgc 16490044
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 643 cattgagactatcagaaaaagat 665 ||||||||||||||||||||||| Sbjct: 2369544 cattgagactatcagaaaaagat 2369522
>gb|AC108690.4| Homo sapiens 3 BAC RP11-783N9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194994 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 aaaagtgaaaataacaaattcct 492 ||||||||||||||||||||||| Sbjct: 129972 aaaagtgaaaataacaaattcct 129950
>gb|AC068194.6| Homo sapiens BAC clone RP11-113L22 from 2, complete sequence Length = 166682 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 396 ttgacagcattataaaggaaggg 418 ||||||||||||||||||||||| Sbjct: 115476 ttgacagcattataaaggaaggg 115498
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 cctctcgccgccgtcgccgtcaccgcc 48 ||||||||||||||||||||| ||||| Sbjct: 47905 cctctcgccgccgtcgccgtcgccgcc 47931
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 cctctcgccgccgtcgccgtcaccgcc 48 ||||||||||||||||||||| ||||| Sbjct: 103262 cctctcgccgccgtcgccgtcgccgcc 103288
>dbj|AK108857.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-B03, full insert sequence Length = 1235 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 44 ccgccgacctcctcccttcgccggcgc 70 |||||| |||||||||||||||||||| Sbjct: 148 ccgccgtcctcctcccttcgccggcgc 174
>dbj|AK099831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105L05, full insert sequence Length = 3062 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 22 cctctcgccgccgtcgccgtcaccgcc 48 ||||||||||||||||||||| ||||| Sbjct: 211 cctctcgccgccgtcgccgtcgccgcc 237
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 cctggaagtggaaaaggtacacaatgt 301 ||||| ||||||||||||||||||||| Sbjct: 16813 cctggtagtggaaaaggtacacaatgt 16787
>gb|U82330.1|PAU82330 Prunus armeniaca adenylate kinase homolog mRNA, complete cds Length = 1305 Score = 46.1 bits (23), Expect = 0.28 Identities = 32/35 (91%) Strand = Plus / Plus Query: 260 tttgttctaggtggtcctggaagtggaaaaggtac 294 |||||| ||||||| ||||| |||||||||||||| Sbjct: 334 tttgttttaggtggccctggcagtggaaaaggtac 368 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 564 ttgtgctattctttgactgttctgaggaagagatggt 600 ||||||| |||||||||||| |||| |||||||||| Sbjct: 638 ttgtgcttttctttgactgtcctgaacaagagatggt 674
>ref|NM_001054759.1| Oryza sativa (japonica cultivar-group) Os02g0766600 (Os02g0766600) mRNA, complete cds Length = 1078 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 120 cggcccctccctctccgtcctcctcc 95
>ref|XM_001168623.1| PREDICTED: Pan troglodytes similar to Adenylate kinase 5, transcript variant 2 (LOC456963), mRNA Length = 1760 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 423 ttgttataggtggtccaggaagtggaaagggtac 456
>ref|XM_001168666.1| PREDICTED: Pan troglodytes similar to Adenylate kinase 5, transcript variant 4 (LOC456963), mRNA Length = 1789 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 452 ttgttataggtggtccaggaagtggaaagggtac 485
>ref|XM_001168641.1| PREDICTED: Pan troglodytes similar to Adenylate kinase 5, transcript variant 3 (LOC456963), mRNA Length = 2690 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 1353 ttgttataggtggtccaggaagtggaaagggtac 1386
>ref|XM_001168689.1| PREDICTED: Pan troglodytes similar to Adenylate kinase 5, transcript variant 5 (LOC456963), mRNA Length = 2081 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 744 ttgttataggtggtccaggaagtggaaagggtac 777
>ref|NM_012093.2| Homo sapiens adenylate kinase 5 (AK5), transcript variant 2, mRNA Length = 3962 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 1355 ttgttataggtggtccaggaagtggaaagggtac 1388
>gb|L06249.1|STMOLEC Streptomyces antibioticus ATP-binding protein and membrane protein (oleC-ORF1, oleC-ORF2, oleC-ORF3, oleC-ORF4, and oleC-ORF5) genes, complete cds; 3427 base-pairs Length = 3427 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 cgccgactggacctggccgcct 147 |||||||||||||||||||||| Sbjct: 1939 cgccgactggacctggccgcct 1960
>ref|NM_174858.1| Homo sapiens adenylate kinase 5 (AK5), transcript variant 1, mRNA Length = 3257 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 664 ttgttataggtggtccaggaagtggaaagggtac 697
>dbj|AK090967.1| Homo sapiens cDNA FLJ33648 fis, clone BRAMY2024449, weakly similar to ADENYLATE KINASE ISOENZYME 1 (EC 2.7.4.3) Length = 2148 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 591 ttgttataggtggtccaggaagtggaaagggtac 624
>gb|AF445193.1| Homo sapiens unknown mRNA Length = 2100 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 744 ttgttataggtggtccaggaagtggaaagggtac 777
>gb|BC036666.1| Homo sapiens adenylate kinase 5, mRNA (cDNA clone MGC:33326 IMAGE:4816351), complete cds Length = 3262 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 670 ttgttataggtggtccaggaagtggaaagggtac 703
>gb|BC033896.1| Homo sapiens adenylate kinase 5, mRNA (cDNA clone MGC:33394 IMAGE:4818069), complete cds Length = 2726 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 1360 ttgttataggtggtccaggaagtggaaagggtac 1393
>gb|AC096743.3| Homo sapiens BAC clone RP11-356M17 from 4, complete sequence Length = 103765 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 aagtggaaaaggtacacaatgt 301 |||||||||||||||||||||| Sbjct: 44634 aagtggaaaaggtacacaatgt 44613
>emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chromosome 10 Contains the SMBP gene for SM-11044 binding protein (SMBP)(EP70-P-iso), the TLL2 gene for tolloid-like 2, a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM, NUMATRIN) pseudogene, a ribosomal protein S2 (RPS2)(LLREP3) pseudogene, the 3' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)) and two CpG islands, complete sequence Length = 162820 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 cgccgccgtcgccgtcaccgcc 48 |||||||||||||||||||||| Sbjct: 98281 cgccgccgtcgccgtcaccgcc 98302
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 136498 cggcccctccctctccgtcctcctcc 136473
>dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07, map 22, complete sequences Length = 181678 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 939 tttaaaagtattttggatatttgtta 964 ||||||||| |||||||||||||||| Sbjct: 148184 tttaaaagtgttttggatatttgtta 148159
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 68317 cggcccctccctctccgtcctcctcc 68292
>gb|AY171600.2| Homo sapiens adenylate kinase 6 mRNA, complete cds Length = 3932 Score = 44.1 bits (22), Expect = 1.1 Identities = 31/34 (91%) Strand = Plus / Plus Query: 261 ttgttctaggtggtcctggaagtggaaaaggtac 294 ||||| |||||||||| ||||||||||| ||||| Sbjct: 1360 ttgttataggtggtccaggaagtggaaagggtac 1393
>ref|NM_020123.2| Homo sapiens transmembrane 9 superfamily member 3 (TM9SF3), mRNA gb|AF269150.1|AF269150 Homo sapiens transmembrane protein TM9SF3 (TM9SF3) mRNA, complete cds Length = 3592 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 cgccgccgtcgccgtcaccgcc 48 |||||||||||||||||||||| Sbjct: 69 cgccgccgtcgccgtcaccgcc 48
>dbj|AK099386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072H02, full insert sequence Length = 961 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 127 cggcccctccctctccgtcctcctcc 102
>dbj|AK059779.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C02, full insert sequence Length = 1078 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 cggcgcctccctctccgtcctcctcc 95 |||| ||||||||||||||||||||| Sbjct: 120 cggcccctccctctccgtcctcctcc 95
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccgccgtcgccgtcaccgccg 49 ||||||||||||||||||||| Sbjct: 3144004 ccgccgtcgccgtcaccgccg 3143984
>emb|CT476804.7| Zebrafish DNA sequence from clone CH211-202E9 in linkage group 24, complete sequence Length = 186743 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ataaaaagtgaaaataacaaa 487 ||||||||||||||||||||| Sbjct: 175876 ataaaaagtgaaaataacaaa 175856
>gb|EF068369.1| Plectrocnemia conspersa microsatellite Plc-57 sequence Length = 363 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cgccgtcgccgtcaccgccga 50 ||||||||||||||||||||| Sbjct: 105 cgccgtcgccgtcaccgccga 85
>emb|CT962505.9| M.truncatula DNA sequence from clone MTH2-46C14 on chromosome 3, complete sequence Length = 147189 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 ttgttagcaagtagagaggaa 979 ||||||||||||||||||||| Sbjct: 6163 ttgttagcaagtagagaggaa 6143
>emb|CT831650.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN016L10, full insert sequence Length = 1745 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 25 ctcgccgccgtcgccgtcaccgccg 49 |||||||||||||||||| |||||| Sbjct: 1133 ctcgccgccgtcgccgtcgccgccg 1109
>ref|NM_001058545.1| Oryza sativa (japonica cultivar-group) Os04g0105500 (Os04g0105500) mRNA, complete cds Length = 1119 Score = 42.1 bits (21), Expect = 4.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 572 ttctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaatcagggacga 631 ||||||||||| ||||||| |||||||| | |||| | || || || || ||||||||| Sbjct: 585 ttctttgactgccctgaggatgagatggttaaacgtttactaggccgtaaccagggacga 644 Query: 632 gctgacgataacattga 648 | || ||||||||||| Sbjct: 645 gtggatgataacattga 661
>ref|NM_001055524.1| Oryza sativa (japonica cultivar-group) Os03g0152000 (Os03g0152000) mRNA, complete cds Length = 1400 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 tctcgccgccgtcgccgtcaccgcc 48 |||||||||||||| |||||||||| Sbjct: 719 tctcgccgccgtcggcgtcaccgcc 695
>ref|NM_001055034.1| Oryza sativa (japonica cultivar-group) Os02g0815100 (Os02g0815100) mRNA, complete cds Length = 1195 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgccgccgtcgccgtcaccgccgacctcc 55 |||||||||||||||| |||||| ||||| Sbjct: 71 cgccgccgtcgccgtcgccgccgccctcc 99
>gb|AC190282.4| Rhesus Macaque BAC CH250-310C5 () complete sequence Length = 159977 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 493 cattgatggatttccaaggaatcaa 517 ||||||||||||||||||| ||||| Sbjct: 135840 cattgatggatttccaagggatcaa 135864
>emb|CR936282.7| Zebrafish DNA sequence from clone DKEY-108D10 in linkage group 24, complete sequence Length = 137077 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 ataaaaagtgaaaataacaaa 487 ||||||||||||||||||||| Sbjct: 93849 ataaaaagtgaaaataacaaa 93869
>emb|CT981548.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 496 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 575 tttgactgttctgaggaagagatgg 599 ||||| ||||||||||||||||||| Sbjct: 9 tttgattgttctgaggaagagatgg 33
>gb|AY118081.2| Streptomyces sp. KCTC 0041BP dihydrochalcomyin biosynthesis gene cluster, complete sequence Length = 75439 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 ccgccgtcgccgtcaccgccg 49 ||||||||||||||||||||| Sbjct: 46245 ccgccgtcgccgtcaccgccg 46225
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 attgttccatctgagataacc 442 ||||||||||||||||||||| Sbjct: 15795 attgttccatctgagataacc 15775
>gb|AC005352.2| Homo sapiens chromosome 5, BAC clone 24h24 (LBNL H194), complete sequence Length = 97207 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 676 tgaagaatcaagtttgcctgtagtt 700 |||||||||||||||| |||||||| Sbjct: 38239 tgaagaatcaagtttggctgtagtt 38263
>gb|AC025718.2| Caenorhabditis elegans cosmid Y43B11AM, complete sequence Length = 3114 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acaagtaggcaatgagcacag 179 ||||||||||||||||||||| Sbjct: 500 acaagtaggcaatgagcacag 480 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acaagtaggcaatgagcacag 179 ||||||||||||||||||||| Sbjct: 2708 acaagtaggcaatgagcacag 2728
>ref|XM_705322.1| Candida albicans SC5314 putative uridine kinase (CaO19.12662), mRNA Length = 840 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 630 gagctgacgataacattgagactatcagaaaaagatt 666 ||||||||||||||||||| | ||||| ||| ||||| Sbjct: 665 gagctgacgataacattgaaagtatcaaaaagagatt 701
>ref|XM_705311.1| Candida albicans SC5314 putative uridine kinase (CaO19.5195), mRNA Length = 840 Score = 42.1 bits (21), Expect = 4.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 630 gagctgacgataacattgagactatcagaaaaagatt 666 ||||||||||||||||||| | ||||| ||| ||||| Sbjct: 665 gagctgacgataacattgaaagtatcaaaaagagatt 701
>gb|AC093433.2| Homo sapiens chromosome 1 clone RP11-363H12, complete sequence Length = 172613 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 ctaggtggtcctggaagtggaaaaggtac 294 ||||||||||| ||||||||||| ||||| Sbjct: 146654 ctaggtggtccaggaagtggaaagggtac 146682
>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence Length = 125551 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 atgttgggtgggaagaaagtt 250 ||||||||||||||||||||| Sbjct: 104180 atgttgggtgggaagaaagtt 104160
>emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15 on chromosome 3, complete sequence Length = 112155 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 ttgttagcaagtagagaggaa 979 ||||||||||||||||||||| Sbjct: 30642 ttgttagcaagtagagaggaa 30662
>gb|AC022444.7| Homo sapiens chromosome 5 clone RP11-422J14, complete sequence Length = 45141 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 528 tgtcatttgagaatgttataaaaat 552 |||||||||||||||||||| |||| Sbjct: 22973 tgtcatttgagaatgttatataaat 22949
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccgtcaccgccgacctcctcc 58 ||||||||||||||||||||| Sbjct: 22287052 ccgtcaccgccgacctcctcc 22287072
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ctcgccgccgtcgccgtcacc 45 ||||||||||||||||||||| Sbjct: 18195740 ctcgccgccgtcgccgtcacc 18195720
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 tctcgccgccgtcgccgtcaccgcc 48 |||||||||||||| |||||||||| Sbjct: 2848847 tctcgccgccgtcggcgtcaccgcc 2848871
>emb|AL132795.12|HSDJ412I7 Human DNA sequence from clone RP3-412I7 on chromosome 6q22.1-22.33 Contains a gene similar to murine radial spokehead-like 1, a novel gene, the KPNA5 gene for karyopherin alpha 5 (importin alpha 6) and a CpG island, complete sequence Length = 135417 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 456 aagaagctatgataaaaagtgaaaa 480 |||||| |||||||||||||||||| Sbjct: 16138 aagaagttatgataaaaagtgaaaa 16162
>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence Length = 174487 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 tttgagaatgttataaaaata 553 ||||||||||||||||||||| Sbjct: 112814 tttgagaatgttataaaaata 112794
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ccgccgtcgccgtcaccgccg 49 ||||||||||||||||||||| Sbjct: 270142 ccgccgtcgccgtcaccgccg 270162
>dbj|AP005759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556A05 Length = 158189 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ctcgccgccgtcgccgtcacc 45 ||||||||||||||||||||| Sbjct: 44464 ctcgccgccgtcgccgtcacc 44444
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgccgccgtcgccgtcaccgccgacctcc 55 |||||||||||||||| |||||| ||||| Sbjct: 98602 cgccgccgtcgccgtcgccgccgccctcc 98630
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 24 tctcgccgccgtcgccgtcaccgcc 48 |||||||||||||| |||||||||| Sbjct: 120692 tctcgccgccgtcggcgtcaccgcc 120716
>gb|AC025181.8| Homo sapiens chromosome 5 clone CTD-2186M15, complete sequence Length = 96399 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 528 tgtcatttgagaatgttataaaaat 552 |||||||||||||||||||| |||| Sbjct: 16209 tgtcatttgagaatgttatataaat 16233
>emb|BX248323.8| Zebrafish DNA sequence from clone CH211-199J6, complete sequence Length = 177714 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 581 tgttctgaggaagagatggta 601 ||||||||||||||||||||| Sbjct: 20073 tgttctgaggaagagatggta 20093
>dbj|AK108780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-A04, full insert sequence Length = 1195 Score = 42.1 bits (21), Expect = 4.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 27 cgccgccgtcgccgtcaccgccgacctcc 55 |||||||||||||||| |||||| ||||| Sbjct: 71 cgccgccgtcgccgtcgccgccgccctcc 99
>dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H19, full insert sequence Length = 1401 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 tctcgccgccgtcgccgtcaccgcc 48 |||||||||||||| |||||||||| Sbjct: 720 tctcgccgccgtcggcgtcaccgcc 696
>emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, complete sequence Length = 112155 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 ttgttagcaagtagagaggaa 979 ||||||||||||||||||||| Sbjct: 30642 ttgttagcaagtagagaggaa 30662
>dbj|AK071444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093I17, full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 4.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 572 ttctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaatcagggacga 631 ||||||||||| ||||||| |||||||| | |||| | || || || || ||||||||| Sbjct: 586 ttctttgactgccctgaggatgagatggttaaacgtttactaggccgtaaccagggacga 645 Query: 632 gctgacgataacattga 648 | || ||||||||||| Sbjct: 646 gtggatgataacattga 662
>dbj|AK068066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130G18, full insert sequence Length = 1235 Score = 42.1 bits (21), Expect = 4.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 572 ttctttgactgttctgaggaagagatggtaagacgtcttctgggtcgaaatcagggacga 631 ||||||||||| ||||||| |||||||| | |||| | || || || || ||||||||| Sbjct: 573 ttctttgactgccctgaggatgagatggttaaacgtttactaggccgtaaccagggacga 632 Query: 632 gctgacgataacattga 648 | || ||||||||||| Sbjct: 633 gtggatgataacattga 649
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 921 taatcattaattgtttgattt 941 ||||||||||||||||||||| Sbjct: 1539543 taatcattaattgtttgattt 1539563
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ccgccgtcgccgtcaccgccg 49 ||||||||||||||||||||| Sbjct: 1513223 ccgccgtcgccgtcaccgccg 1513243
>gb|U56963.1| Caenorhabditis elegans cosmid T13A10, complete sequence Length = 33735 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acaagtaggcaatgagcacag 179 ||||||||||||||||||||| Sbjct: 32823 acaagtaggcaatgagcacag 32803
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ccgtcaccgccgacctcctcc 58 ||||||||||||||||||||| Sbjct: 74702 ccgtcaccgccgacctcctcc 74682
>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete sequence Length = 222471 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 acaaattcctcattgatggat 503 ||||||||||||||||||||| Sbjct: 23210 acaaattcctcattgatggat 23230 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 234,444,187 Number of extensions: 13303270 Number of successful extensions: 327438 Number of sequences better than 10.0: 148 Number of HSP's gapped: 327427 Number of HSP's successfully gapped: 241 Length of query: 1174 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1151 Effective length of database: 18,503,978,556 Effective search space: 21298079317956 Effective search space used: 21298079317956 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
