ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf29a17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os01g0149600:Os01g0149600 | 32 | 0.75 | 2 | D29712:Os01g0149400 | 31 | 0.98 | 3 | Os05g0337500:Os05g0337500 | 30 | 1.7 | 4 | Os01g0777000:Os01g0777000 | 30 | 2.8 | 5 | AK120982:Os01g0688200 | 29 | 4.8 | 6 | AK064176:Os01g0856600 | 29 | 4.8 | 7 | Os01g0153100:Os01g0153100 | 29 | 4.9 | 8 | AB075378:Os01g0152900 | 29 | 4.9 | 9 | AK069097:Os08g0485700 | 28 | 6.3 | 10 | AK068131:Os08g0485700 | 28 | 6.3 | 11 | Os06g0518000:Os06g0518000 | 28 | 8.2 | 12 | AK067897:Os03g0793100 | 28 | 8.2 | 13 | AK067186:Os07g0588900 | 28 | 8.2 | 14 | Os06g0289900:Os06g0289900 | 28 | 8.3 | 15 | AK120605:Os05g0566900 | 28 | 8.3 | 16 | AK102711:Os05g0566900 | 28 | 8.3 | 17 | AK066026:Os05g0566900 | 28 | 8.3 | 18 | AK063127:Os08g0199200 | 28 | 8.3 |
|---|
>Os01g0149600:Os01g0149600 | Length = 153 Score = 31.6 bits (70), Expect = 0.75 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 235 ELSSRAPPTDPPSACSRLPSGDARLQRWEGSRRGRDKLPHLTSNYTI 375 E + +AP P A RLP+G A EG + GR K Y I Sbjct: 22 EKAEKAPAGKKPKAEKRLPAGKAEKGSGEGKKAGRKKAKKSVETYKI 68
>D29712:Os01g0149400 | Length = 68 Score = 31.2 bits (69), Expect = 0.98 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +1 Query: 235 ELSSRAPPTDPPSACSRLPSGDARLQRWEGSRRGRDKLPHLTSNYTI 375 E + +AP P A RLP+G A EG + GR K Y I Sbjct: 22 EKAEKAPAGKKPKAEKRLPAGKAEKGSGEGRKAGRKKAKKSVETYKI 68
>Os05g0337500:Os05g0337500 | Length = 259 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = -2 Query: 179 RWRRTAGPGAILGRETAGSASLAGGEANDSVHWCGEGMGRK----VVVAIWKGRRRRV 18 RW R G +GRE+A + AGG A+ S GE ++ +A+ GR R V Sbjct: 148 RWARVRGEPREMGRESAETVGTAGGAASKSGRRSGERERQRSDGQAKLAMGGGRERMV 205
>Os01g0777000:Os01g0777000 | Length = 1030 Score = 29.6 bits (65), Expect = 2.8 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = +1 Query: 232 DELSSRAPPTDPPSACSRLPSGDARLQRWEGSRRGR---DKLPHLTSNYTIVSILSELGE 402 D L+S APP + P A S PSG R++ + + R + D H+ +L G Sbjct: 81 DSLASLAPPPEAPPAASPSPSG-GRVRLYASAARAKYLVDTPEHIWGRLDEGLLLEAAGR 139 Query: 403 YV 408 YV Sbjct: 140 YV 141
>AK120982:Os01g0688200 | Length = 386 Score = 28.9 bits (63), Expect = 4.8 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Frame = -2 Query: 170 RTAGPGAILGRETAGSASLAGGEANDSVHWCGEGMGRKVVVAI-----WKGRRRRVAG 12 R A PG GR A + + AGG A D EG ++ A W RRRV G Sbjct: 20 RLARPGCAGGRRAAVAVAAAGGAARDRKPPRLEGASEELRAAAAQCLDWAPARRRVRG 77
>AK064176:Os01g0856600 | Length = 244 Score = 28.9 bits (63), Expect = 4.8 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 Query: 678 ACIADFFCRNMACL*LLFMIRVYYEER 758 +C+ CR+ CL +F +RV+ +ER Sbjct: 111 SCVGHHHCRDRCCLDTVFRLRVFQDER 137
>Os01g0153100:Os01g0153100 | Length = 153 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +1 Query: 235 ELSSRAPPTDPPSACSRLPSGDARLQRWEGSRRGRDKLPHLTSNYTI 375 E + +AP P A RLP+G EG + GR K Y I Sbjct: 22 EKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKAGRKKGKKSVETYKI 68
>AB075378:Os01g0152900 | Length = 153 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +1 Query: 235 ELSSRAPPTDPPSACSRLPSGDARLQRWEGSRRGRDKLPHLTSNYTI 375 E + +AP P A RLP+G EG + GR K Y I Sbjct: 22 EKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKAGRKKGKKSVETYKI 68
>AK069097:Os08g0485700 | Length = 885 Score = 28.5 bits (62), Expect = 6.3 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 Query: 190 PSTIVLPTCSLLGFDELSSRAPPTDPPSACSRLPSGDAR 306 P ++ P GF + +SR P + PP+ S+ G AR Sbjct: 755 PGSLARPNFVPTGFSQFASRPPTSVPPADSSQFAGGMAR 793
>AK068131:Os08g0485700 | Length = 702 Score = 28.5 bits (62), Expect = 6.3 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +1 Query: 190 PSTIVLPTCSLLGFDELSSRAPPTDPPSACSRLPSGDAR 306 P ++ P GF + +SR P + PP+ S+ G AR Sbjct: 572 PGSLARPNFVPTGFSQFASRPPTSVPPADSSQFAGGMAR 610
>Os06g0518000:Os06g0518000 | Length = 232 Score = 28.1 bits (61), Expect = 8.2 Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +2 Query: 206 CRPVRCWASTS*VAEH--HRRILLPPA 280 CR RCWASTS H RR++ PPA Sbjct: 140 CR--RCWASTSSPTGHLVRRRLVFPPA 164
>AK067897:Os03g0793100 | Length = 268 Score = 28.1 bits (61), Expect = 8.2 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 258 DGSSFRLQSLAIRRRTVAEVGGKQKRARQAATSHVQLYY 374 +GS R + + T GG+++R R AA +HV+ +Y Sbjct: 83 EGSGSRWMLIVV---TTTRSGGRERRRRNAALAHVEKHY 118
>AK067186:Os07g0588900 | Length = 163 Score = 28.1 bits (61), Expect = 8.2 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +3 Query: 258 DGSSFRLQSLAIRRRTVAEVGGKQKRARQAATSHVQLYY 374 +GS R + + T GG+++R R AA +HV+ +Y Sbjct: 82 EGSGSRWMLIVV---TTTRSGGRERRRRNAALAHVEKHY 117
>Os06g0289900:Os06g0289900 | Length = 481 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Frame = +1 Query: 268 PSACSRLPSGDARLQRWEGSRRGRDKL--------PHLTSNYTIVSILSEL 396 P S P GD L RWE RR L P +T+ T V+++S + Sbjct: 87 PFDASEFPGGDPFLLRWEALRRSLHLLGPVIAGVTPRVTATVTDVTLVSHV 137
>AK120605:Os05g0566900 | Length = 852 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Frame = +1 Query: 154 PGPAVLLHLQLVPSTIVLPTCSLLGFDELSSRAPPTDPPSAC------SRLPSGDARLQR 315 P P L+H P+ + P +++G+ L+ P PSA S P + Sbjct: 618 PLPQQLVHPYSQPTVPLAPFANMIGYPYLAQNYPAAYLPSAAFQQAYSSNGPFHQSAAAA 677 Query: 316 WEGSRRGRDKLPHLTSNYTIVSILSELGEYVSLYNTRGPS 435 G+ + +P +N + S+ + +S Y G S Sbjct: 678 VPGAMKYNMNVPQFKNNLSATSLQQQPSSVISGYGGFGSS 717
>AK102711:Os05g0566900 | Length = 749 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Frame = +1 Query: 154 PGPAVLLHLQLVPSTIVLPTCSLLGFDELSSRAPPTDPPSAC------SRLPSGDARLQR 315 P P L+H P+ + P +++G+ L+ P PSA S P + Sbjct: 618 PLPQQLVHPYSQPTVPLAPFANMIGYPYLAQNYPAAYLPSAAFQQAYSSNGPFHQSAAAA 677 Query: 316 WEGSRRGRDKLPHLTSNYTIVSILSELGEYVSLYNTRGPS 435 G+ + +P +N + S+ + +S Y G S Sbjct: 678 VPGAMKYNMNVPQFKNNLSATSLQQQPSSVISGYGGFGSS 717
>AK066026:Os05g0566900 | Length = 852 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%) Frame = +1 Query: 154 PGPAVLLHLQLVPSTIVLPTCSLLGFDELSSRAPPTDPPSAC------SRLPSGDARLQR 315 P P L+H P+ + P +++G+ L+ P PSA S P + Sbjct: 618 PLPQQLVHPYSQPTVPLAPFANMIGYPYLAQNYPAAYLPSAAFQQAYSSNGPFHQSAAAA 677 Query: 316 WEGSRRGRDKLPHLTSNYTIVSILSELGEYVSLYNTRGPS 435 G+ + +P +N + S+ + +S Y G S Sbjct: 678 VPGAMKYNMNVPQFKNNLSATSLQQQPSSVISGYGGFGSS 717
>AK063127:Os08g0199200 | Length = 69 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 253 PPTDPPSACSRLPSGDARLQRWEGSRRGRDKL 348 P PPS + LP A +R EG ++GR+++ Sbjct: 22 PRRQPPSPAAELPRPVAPGERGEGMKKGRERM 53 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,902,933 Number of extensions: 541819 Number of successful extensions: 1798 Number of sequences better than 10.0: 18 Number of HSP's gapped: 1797 Number of HSP's successfully gapped: 18 Length of query: 289 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 189 Effective length of database: 11,395,755 Effective search space: 2153797695 Effective search space used: 2153797695 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
