ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf26g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os05g07790:12005.t00659:unspliced-genomic expressed protein 97 9e-39
2LOC_Os01g50040:12001.t04441:unspliced-genomic expressed protein 59 2e-08
3LOC_Os04g23360:12004.t02062:unspliced-genomic retrotransposo... 34 0.98
4LOC_Os10g04490:12010.t00333:unspliced-genomic conserved hypo... 31 1.3
5LOC_Os08g30980:12008.t02848:unspliced-genomic hypothetical p... 33 1.4
6LOC_Os10g05800:12010.t00454:unspliced-genomic F-box protein ... 32 2.5
7LOC_Os09g27140:12009.t02393:unspliced-genomic expressed protein 31 6.6
8LOC_Os06g01260:12006.t00026:unspliced-genomic phytochelatin ... 31 6.6
9LOC_Os02g29090:12002.t02603:unspliced-genomic expressed protein 31 6.6
10LOC_Os04g35410:12004.t03211:unspliced-genomic expressed protein 29 7.6
11LOC_Os06g48320:12006.t04518:unspliced-genomic lipid binding ... 25 8.1
12LOC_Os10g03780:12010.t00267:unspliced-genomic F-box domain c... 30 9.1
13LOC_Os07g10290:12007.t00903:unspliced-genomic hypothetical p... 30 9.1
14LOC_Os04g17120:12004.t01464:unspliced-genomic actin binding ... 30 9.1
15LOC_Os02g45640:12002.t04151:unspliced-genomic hypothetical p... 30 9.1
16LOC_Os01g61370:12001.t05516:unspliced-genomic expressed protein 30 9.1
17LOC_Os12g40790:12012.t03757:unspliced-genomic protein bindin... 30 9.2
18LOC_Os06g26110:12006.t02418:unspliced-genomic hypothetical p... 30 9.2
19LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein 24 9.7

>LOC_Os05g07790:12005.t00659:unspliced-genomic expressed protein|
          Length = 5214
 Score = 97.3 bits (206), Expect(4) = 9e-39
 Identities = 40/50 (80%), Positives = 42/50 (84%)
 Frame = +2 / +1

                                                              
Query: 5    SISLYFL*DIDNIYYETEYRKEWCTSNERPAPCFLFARKFTRGAGLKLLN 154
            S  L   *DIDNIYYETE RKEWCTSN +PAPCFLFARKFTR AGLKLL+
Sbjct: 4240 STYLLNF*DIDNIYYETENRKEWCTSNGKPAPCFLFARKFTRAAGLKLLD 4389



 Score = 51.9 bits (107), Expect(4) = 9e-39
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +3 / +2

                                        
Query: 222  FSLASRILPVCIYLKERGGGDRK*QRFF 305
            FS+ SRILP C Y+KE GGGDR+*QR F
Sbjct: 4568 FSVKSRILPACTYVKESGGGDRR*QRIF 4651



 Score = 47.8 bits (98), Expect(4) = 9e-39
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +1 / +3

                                                      
Query: 286  ENSRDFLRVLDIICCTLGSTIGVVKR*TYASYSARLVHMLAH 411
            +NS  FL +   ICCTL   IGV+K+*+    + RLVHML H
Sbjct: 4635 DNSEFFLGIFITICCTLKRDIGVLKQ*SLFLLAPRLVHMLTH 4760



 Score = 28.6 bits (56), Expect(4) = 9e-39
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2 / +2

                                    
Query: 419  LSIVTGTVSNYPQLNLEEPIKFHS 490
            LSI+T TVSN+ QL+ +E  +F S
Sbjct: 4763 LSIITVTVSNHLQLDWQESPQFFS 4834



 Score = 84.5 bits (178), Expect(4) = 3e-33
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = -2 / -3

                                                           
Query: 149  EASDRLHV*TSLQRGSKVLVSHYLCTTPFYIRSHNIYYQYPTKNIKR 9
            EASD+L V*TSLQ+GSKVLV HYL TTPFY +SHNIYYQYP  +  R
Sbjct: 4384 EASDQLLV*TSLQKGSKVLVFHYLYTTPFYFQSHNIYYQYPKNSTNR 4244



 Score = 51.0 bits (105), Expect(4) = 3e-33
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -1 / -2

                                         
Query: 306  QKISAIFCPLHPFPLGICKLAVFCLRGRN 220
            +K + IFCPLH FPL +CKLAVFC   RN
Sbjct: 4652 KKFAVIFCPLHHFPLRMCKLAVFCF*RRN 4566



 Score = 41.4 bits (84), Expect(4) = 3e-33
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = -2 / -3

                                                    
Query: 404  NMCTNLALYEA*VYLFTTPIVLPRVQQIISNTRKKSLLFS 285
            N+CTNL      +Y F TP+ L RVQQI+    KK+ L S
Sbjct: 4753 NICTNLGAKRNKLYCFRTPMSLFRVQQIVMKMPKKNSLLS 4634



 Score = 29.9 bits (59), Expect(4) = 3e-33
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3 / -3

                                  
Query: 484  KLNWFFQIQLWIVAYSSSYNAE 419
            +L  F  IQL +VAYS SYNA+
Sbjct: 4828 ELR*FLPIQLQVVAYSYSYNAK 4763



 Score = 84.5 bits (178), Expect(3) = 4e-28
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = +1 / +3

                                                                        
Query: 7    YLFIFFVGY**YIL*DRI*KGVVHK**ETSTLLPLCKEVYTWSRSEAS*LFIYSSKMMSI 186
            YLF+ F+GY**YIL*D  *KGVV+K* +TSTLLP CKEVYT S SEAS*   + +   S 
Sbjct: 4242 YLFVEFLGY**YIL*D*K*KGVVYK*WKTSTLLPFCKEVYTSSWSEAS*FSKFRTFSFSF 4421

                    
Query: 187  YIVQETSA 210
            +IV +T A
Sbjct: 4422 HIVMQTQA 4445



 Score = 51.5 bits (106), Expect(3) = 4e-28
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +2 / +1

                                         
Query: 218  RFLPRKQNTASLHIPKGKGWRGQKIAEIF 304
            +FL +KQNTASLHI KGK WRGQKI   F
Sbjct: 4564 KFLRQKQNTASLHIRKGKWWRGQKITANF 4650



 Score = 25.8 bits (50), Expect(3) = 4e-28
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +2 / +1

                                                    
Query: 293  AEIFCVC*I*FVAL*EVQ*VL*RDKLMLHIALG*YTC*LT 412
            A  F    + FVAL*+  *V * +K+     LG*Y C* T
Sbjct: 4642 ANFFWASSLQFVAL*KGT*VF*SNKVCFF*HLG*YIC*PT 4761



 Score = 63.4 bits (132), Expect(3) = 7e-23
 Identities = 26/29 (89%), Positives = 26/29 (89%)
 Frame = -1 / -2

                                         
Query: 150  RSFRPAPRVNFLAKRKQGAGLSLLVHHSF 64
            RSFRPA RVNFLAKRKQGAG  LLVHHSF
Sbjct: 4385 RSFRPAARVNFLAKRKQGAGFPLLVHHSF 4299



 Score = 49.2 bits (101), Expect(3) = 7e-23
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = -3 / -1

                                     
Query: 295  CYFLSPPPLSFRYMQTGSILLAREK 221
            CY LSPPPLSF Y+Q GSILL  EK
Sbjct: 4641 CYLLSPPPLSFTYVQAGSILLLTEK 4567



 Score = 39.1 bits (79), Expect(3) = 7e-23
 Identities = 22/49 (44%), Positives = 27/49 (55%)
 Frame = -3 / -1

                                                             
Query: 418  LSCELTCVLT*RYMKHKFISSQHLLYFLECNKLYLTHAKNLCYFLSPPP 272
            LS  LT VLT*   +  FI+ +HL  F ECNKL     K +  +L  PP
Sbjct: 4767 LSSGLTYVLT*VLKETNFIALEHLCPFSECNKL**RCPKKIRCYLLSPP 4621



 Score = 70.7 bits (148), Expect(2) = 3e-21
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = +3 / +2

                                                      
Query: 27   RILIIYIMRPNIERSGAQVMRDQHLASSLQGSLHVEPV*SFL 152
            RILIIYIMR  IERSG QVM +QHLAS LQGSLH + V*SFL
Sbjct: 4262 RILIIYIMRLKIERSGVQVMENQHLASFLQGSLHEQLV*SFL 4387



 Score = 54.7 bits (113), Expect(2) = 3e-21
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = +1 / +3

                                                  
Query: 217  KVSPSQAEYCQFAYT*RKGVEGTENSRDFLRVLDIICC 330
            KVSPS+AEYCQ A+T*RK VEGTE++ +F   + I  C
Sbjct: 4563 KVSPSKAEYCQLAHT*RKVVEGTEDNSEFFLGIFITIC 4676



 Score = 58.8 bits (122), Expect(2) = 2e-16
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = -3 / -1

                                        
Query: 154  VKKLQTGSTCKLPCKEEARCWSLITCAP 71
            +KKLQT  +CKLPCK+EARCW  ITC P
Sbjct: 4389 IKKLQTSCSCKLPCKKEARCWFSITCTP 4306



 Score = 50.1 bits (103), Expect(2) = 2e-16
 Identities = 22/37 (59%), Positives = 27/37 (72%)
 Frame = -2 / -3

                                                 
Query: 329  QQIISNTRKKSLLFSVPSTPFL*VYANWQYSACEGET 219
            Q ++   +K SLL SVPST FL V A+WQYSA +GET
Sbjct: 4675 QIVMKMPKKNSLLSSVPSTTFLYVCASWQYSAFDGET 4565



 Score = 39.1 bits (79), Expect = 0.022
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = +3 / +2

                                                        
Query: 273  GGGDRK*QRFFACVRYNLLHSRKYNRCCEEINLCFI*R*VSTHV 404
            GG  R  + FF  + YNLLHS K +RC + I       *VST+V
Sbjct: 4622 GGDRR*QRIFFGHLHYNLLHSEKGHRCSKAIKFVSFST*VSTYV 4753



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>LOC_Os01g50040:12001.t04441:unspliced-genomic expressed protein|
          Length = 4799

 Score = 59.3 bits (123), Expect = 2e-08
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = +2 / +1

                                                         
Query: 32   IDNIYYETEYRKEWCTSNERPAPCFLFARKFTRGAGLKLLNSSFI 166
            ID++ Y+ E+R EWC  N    PCFLFARKF+  A + LL +  +
Sbjct: 4210 IDHVNYQMEHRTEWCQCNTTSVPCFLFARKFSYSAAMHLLEAGTV 4344



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>LOC_Os04g23360:12004.t02062:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 7029

 Score = 33.6 bits (67), Expect = 0.98
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = -3 / +3

                                                                        
Query: 493  SRMKLNWFFQIQLWIVAYSSSYNAELSCELTCVLT*RYMKHKFISSQHLLYFLECNKLYL 314
            +R K+ +   +Q++  AY   +  ++   LTC+LT*  + H  I    L YF   + +++
Sbjct: 6840 ARCKVRFICFLQIYCFAYFIHF*HDMLLNLTCLLT**PLPHNIIKQLLLPYFTSNDTIHI 7019

             
Query: 313  T 311
            +
Sbjct: 7020 S 7022



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>LOC_Os10g04490:12010.t00333:unspliced-genomic conserved hypothetical protein|
          Length = 2828

 Score = 31.3 bits (62), Expect(2) = 1.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2 / -2

                                       
Query: 98  VLVSHYLCTTPFYIRSHNIYYQYPTKNI 15
           V    Y C  P+++ + N YY + TKN+
Sbjct: 643 VAYMRYKCPLPYFMTTDNRYYSWRTKNV 560



 Score = 22.6 bits (43), Expect(2) = 1.3
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2 / -3

                                              
Query: 395  TNLALYEA*VYLFTTPIVLPRVQQIISNTRKKSL 294
            T L    A +Y+F T +V P      S   KKSL
Sbjct: 1749 TRLCYILATLYIFLTGLVSPYYPYNCSECPKKSL 1648



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>LOC_Os08g30980:12008.t02848:unspliced-genomic hypothetical protein|
          Length = 3296

 Score = 33.1 bits (66), Expect = 1.4
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2 / +2

                                         
Query: 365  KLMLHIALG*YTC*LTAQLSIVTGTVSNY 451
            KL++H+AL *  C LT  +S  TG  SNY
Sbjct: 1529 KLLVHLALH*KICHLTTLISAQTGNRSNY 1615



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>LOC_Os10g05800:12010.t00454:unspliced-genomic F-box protein family, AtFBL4, putative, expressed|
          Length = 8964

 Score = 32.2 bits (64), Expect = 2.5
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +2 / +3

                                         
Query: 365  KLMLHIALG*YTC*LTAQLSIVTGTVSNY 451
            KL++H+AL *  C LT  +S  TG  SNY
Sbjct: 1662 KLLVHLALL*KICHLTTLISAQTGNRSNY 1748



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>LOC_Os09g27140:12009.t02393:unspliced-genomic expressed protein|
          Length = 4872

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2 / -3

                                 
Query: 428  VTGTVSNYPQLNLEEPIKFHS 490
            +T   +N+ Q+N  EPIKFHS
Sbjct: 2815 ITHKYNNWSQMNAGEPIKFHS 2753



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>LOC_Os06g01260:12006.t00026:unspliced-genomic phytochelatin synthase, putative, expressed|
          Length = 6968

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3 / +3

                                                       
Query: 376  KHKFISSQHLLYFLECNKLYLTHAKNLCYFLSPPPLSFRYMQT 248
            KH  ISS ++LY + C    + H   +   LS  P    +M T
Sbjct: 3570 KH*LISSANILYLIYCISTSVAHLSFVLLLLSECPDQIHFMNT 3698



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>LOC_Os02g29090:12002.t02603:unspliced-genomic expressed protein|
          Length = 3715

 Score = 30.9 bits (61), Expect = 6.6
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +2 / +1

                                        
Query: 62  RKEWCTSNERPAPCFLFARKFTRGAGLKL 148
           R+ WC  N R   CF+    F +G    L
Sbjct: 823 RRRWCPGNSRETRCFIATSLFLKGTSSSL 909



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>LOC_Os04g35410:12004.t03211:unspliced-genomic expressed protein|
          Length = 4114

 Score = 29.0 bits (57), Expect(2) = 7.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3 / +2

                                              
Query: 376  KHKFISSQHLLYFLECNKLYLTHAKNLCYFLSPP 275
            K KFIS ++  YF + +  +L    N+C   S P
Sbjct: 2048 KGKFISERYDTYFTKSSSYFLDRVTNICVNSSVP 2149



 Score = 22.6 bits (43), Expect(2) = 7.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3 / +3

                                 
Query: 196  GLYIYSSSCCYK*RVKKLQTG 134
            G+YI+   CC+   ++ L+ G
Sbjct: 3498 GIYIFGFVCCFHSGLRGLEGG 3560



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>LOC_Os06g48320:12006.t04518:unspliced-genomic lipid binding protein, putative, expressed|
          Length = 3552

 Score = 25.4 bits (49), Expect(2) = 8.1
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3 / -1

                                              
Query: 322  LYLTHAKNLCYFLSPPPLSFRYMQTGSILLAREK 221
            ++L    + CY+L P P     +Q    +L ++K
Sbjct: 3315 IFLKRMNSKCYYLFPAPFKHSILQNKVQVLKKKK 3214



 Score = 22.1 bits (42), Expect(2) = 8.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1 / -2

                           
Query: 111  KRKQGAGLSLLVHHS 67
            K+KQG+   LL+H++
Sbjct: 3218 KKKQGSSSELLMHYN 3174



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>LOC_Os10g03780:12010.t00267:unspliced-genomic F-box domain containing protein, expressed|
          Length = 7190

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2 / +2

                                             
Query: 110  RGSKVLVSHYLCTTPFYIRSHNIYYQYPTKNIK 12
            +G KVL+ H   T   YI S   +YQY    +K
Sbjct: 5960 QGPKVLLLHSTITATTYIHSSLFWYQYEKLKVK 6058



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>LOC_Os07g10290:12007.t00903:unspliced-genomic hypothetical protein|
          Length = 789

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3 / -3

                                    
Query: 187 IYSSSCCYK*RVKKLQTGSTCKLPC 113
           IY+S+CC++   KKL  G +   PC
Sbjct: 238 IYTSACCWRQTNKKLARGYSWSSPC 164



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>LOC_Os04g17120:12004.t01464:unspliced-genomic actin binding protein, putative|
          Length = 3084

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2 / +1

                                        
Query: 95   LVSHYLCTTPFYIRSHNIYYQYPTKNIK 12
            ++S+Y C  P    S N Y QY + NIK
Sbjct: 991  MMSYYFCNLPINFGSINQYSQYVSYNIK 1074



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>LOC_Os02g45640:12002.t04151:unspliced-genomic hypothetical protein|
          Length = 1852

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3 / +2

                                    
Query: 187 IYSSSCCYK*RVKKLQTGSTCKLPC 113
           IY+S+CC++   KKL  G +   PC
Sbjct: 554 IYTSACCWRQTNKKLARGYSWSSPC 628



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>LOC_Os01g61370:12001.t05516:unspliced-genomic expressed protein|
          Length = 1704

 Score = 30.4 bits (60), Expect = 9.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3 / +1

                                   
Query: 235 LAREKPFSWQMSPGLYIYSSSCCY 164
           L  + PFSW+ SPG+   SS+C +
Sbjct: 361 LRTQVPFSWESSPGVPKRSSACMH 432



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>LOC_Os12g40790:12012.t03757:unspliced-genomic protein binding protein, putative, expressed|
          Length = 6242

 Score = 30.4 bits (60), Expect = 9.2
 Identities = 14/54 (25%), Positives = 27/54 (50%)
 Frame = -1 / +1

                                                                  
Query: 300  ISAIFCPLHPFPLGICKLAVFCLRGRNLFHGRCLLDYIYTHHLAAINEELRSFR 139
            I    CP HP     C+ +VF +R R  F+  C+ + +++  L   + E+  ++
Sbjct: 5137 IEMTICPRHPSKSISCRSSVFQVRLR*DFYPSCIFEQLFSCTLFYCSYEI*GYK 5298



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>LOC_Os06g26110:12006.t02418:unspliced-genomic hypothetical protein|
          Length = 2137

 Score = 30.4 bits (60), Expect = 9.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1 / -2

                                       
Query: 415  SAQHCNWNCKQLSTAESGRTN*VSFLR 495
            S  +CNW C  LS+   GR   V + R
Sbjct: 1665 SVSYCNWRCSSLSSTVGGRDTTVGWGR 1585



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>LOC_Os12g19350:12012.t01781:unspliced-genomic expressed protein|
          Length = 14375

 Score = 24.4 bits (47), Expect(2) = 9.7
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1 / +2

                                            
Query: 285  CPLHPFPLGICKLAVFCLRGRNLFHGRCLLDY 190
            C +H   +        C RG+N    R +LDY
Sbjct: 7265 CLIHLLSILYISCMKTCSRGKNFVRMRAVLDY 7360



 Score = 22.6 bits (43), Expect(2) = 9.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3 / +2

                            
Query: 328  NKLYLTHAKNLCYFLS 281
            N LY+ +  +LCY +S
Sbjct: 7130 NMLYILNVSHLCYAIS 7177


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 213,577,583
Number of extensions: 3597639
Number of successful extensions: 12193
Number of sequences better than 10.0: 19
Length of query: 170
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 122
Effective length of database: 52,912,542
Effective search space: 6455330124
Effective search space used: 6455330124
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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