| Clone Name | FLbaf26d11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT831835.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123A10, full insert sequence Length = 1077 Score = 519 bits (262), Expect = e-144 Identities = 496/574 (86%) Strand = Plus / Plus Query: 213 atgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtgtg 272 ||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| ||| Sbjct: 87 atgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatgta 146 Query: 273 ctcatccttggagtccataagtctgggaagacgaccttgctagaaaagttgaagtcaatc 332 || ||||||||||| || ||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 147 cttatccttggagttcacaaggctgggaagacgaccttgctagaaaaggtgaagtcaatc 206 Query: 333 tatttgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaatatt 392 |||||||||| ||||| ||||||||||||| || | |||||| || |||||||||||| Sbjct: 207 tatttgaaagaggaaggccttccacatgatcgtatcgttccaacagttgggcttaatatt 266 Query: 393 ggacgcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctggc 452 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 267 ggacgtattgaagatgccaatgtaaaacttgttttctgggatctgggaggccagcctggc 326 Query: 453 ctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatgttatcgac 512 ||| |||| || |||||||||||||| || ||||| |||||| | |||||||||| ||| Sbjct: 327 ctacgaacaatctgggagaaatattacgaagaggcacatgctgtcatatatgttattgac 386 Query: 513 tctgcctctgcatcaacatttgaagatgccaaatctgctcttgagaaagtgcttcgtcat 572 ||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| ||| Sbjct: 387 tctgctgctgcatcatcatttgaagatgccaaatctgctctggagaaagttcttcatcac 446 Query: 573 gaagatctgcaagaggcaccactactcgtattcgccaacaagcaggatctaccagcagct 632 || |||||||||| || || |||||| |||| || ||||||||||| ||||||||||| Sbjct: 447 gaggatctgcaaggagcgcctctactcatatttgcaaacaagcaggagttaccagcagct 506 Query: 633 gtcacagaagaggaattggatagacatcttcaccttaaagagtttgatgagaggccatat 692 || ||||| || || ||| ||| |||||||||||||||||||| || |||||||||||| Sbjct: 507 gtgacagaggaagagctggctaggcatcttcaccttaaagagttagacgagaggccatat 566 Query: 693 atgtttgttgcgggatctgcatatgatgggacggggatcaaactgggtatcgactggttg 752 ||||| || |||||||| || || |||||||| |||||| ||||| ||||||||| Sbjct: 567 atgttccaggctggatctgcctacgacgggacgggaatcaaagctggtattgactggttg 626 Query: 753 gtagaagaaatgggaaagagtaggcgcaccgagg 786 || |||||||||| || ||||| |||||||||| Sbjct: 627 gtggaagaaatggaaaggagtaaacgcaccgagg 660
>ref|NM_001066835.1| Oryza sativa (japonica cultivar-group) Os07g0620400 (Os07g0620400) mRNA, complete cds Length = 1158 Score = 500 bits (252), Expect = e-138 Identities = 495/576 (85%) Strand = Plus / Plus Query: 211 caatgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtg 270 ||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| || Sbjct: 173 caatgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatg 232 Query: 271 tgctcatccttggagtccataagtctgggaagacgaccttgctagaaaagttgaagtcaa 330 | | ||||||||||| || ||| |||||||||||||||||||||||||| ||||||||| Sbjct: 233 tagttatccttggagttcacaaggctgggaagacgaccttgctagaaaaggtgaagtcaa 292 Query: 331 tctatttgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaata 390 |||||||||||| ||||| ||||||||||||| || | |||||| || |||||||||| Sbjct: 293 tctatttgaaagaggaaggccttccacatgatcgtatcgttccaacagttgggcttaata 352 Query: 391 ttggacgcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctg 450 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 353 ttggacgtattgaagatgccaatgtaaaacttgttttctgggatctgggaggccagcctg 412 Query: 451 gcctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatgttatcg 510 ||||| |||| || |||||||||||||| || ||||| |||||| | |||||||||| | Sbjct: 413 gcctacgaacaatctgggagaaatattacgaagaggcacatgctgtcatatatgttattg 472 Query: 511 actctgcctctgcatcaacatttgaagatgccaaatctgctcttgagaaagtgcttcgtc 570 ||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| || Sbjct: 473 actctgctgctgcatcatcatttgaagatgccaaatctgctctggagaaagttcttcatc 532 Query: 571 atgaagatctgcaagaggcaccactactcgtattcgccaacaagcaggatctaccagcag 630 | || |||||||||| | || |||||| |||| || ||||||||||| ||||||||| Sbjct: 533 acgaggatctgcaaggagtgcctctactcatatttgcaaacaagcaggagttaccagcag 592 Query: 631 ctgtcacagaagaggaattggatagacatcttcaccttaaagagtttgatgagaggccat 690 |||| ||||| || || ||| ||| |||||||||||||||| ||| || |||||||||| Sbjct: 593 ctgtgacagaggaagagctggctaggcatcttcaccttaaagggttagacgagaggccat 652 Query: 691 atatgtttgttgcgggatctgcatatgatgggacggggatcaaactgggtatcgactggt 750 ||||||| || |||||||| || || |||||||| |||||| ||||| ||||||| Sbjct: 653 atatgttccaggctggatctgcctacgacgggacgggaatcaaagctggtattgactggt 712 Query: 751 tggtagaagaaatgggaaagagtaggcgcaccgagg 786 |||| |||||||||| || ||||| |||||||||| Sbjct: 713 tggtggaagaaatggaaaggagtaaacgcaccgagg 748
>dbj|AK099524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K11, full insert sequence Length = 1160 Score = 500 bits (252), Expect = e-138 Identities = 495/576 (85%) Strand = Plus / Plus Query: 211 caatgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtg 270 ||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| || Sbjct: 175 caatgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatg 234 Query: 271 tgctcatccttggagtccataagtctgggaagacgaccttgctagaaaagttgaagtcaa 330 | | ||||||||||| || ||| |||||||||||||||||||||||||| ||||||||| Sbjct: 235 tagttatccttggagttcacaaggctgggaagacgaccttgctagaaaaggtgaagtcaa 294 Query: 331 tctatttgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaata 390 |||||||||||| ||||| ||||||||||||| || | |||||| || |||||||||| Sbjct: 295 tctatttgaaagaggaaggccttccacatgatcgtatcgttccaacagttgggcttaata 354 Query: 391 ttggacgcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctg 450 ||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 355 ttggacgtattgaagatgccaatgtaaaacttgttttctgggatctgggaggccagcctg 414 Query: 451 gcctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatgttatcg 510 ||||| |||| || |||||||||||||| || ||||| |||||| | |||||||||| | Sbjct: 415 gcctacgaacaatctgggagaaatattacgaagaggcacatgctgtcatatatgttattg 474 Query: 511 actctgcctctgcatcaacatttgaagatgccaaatctgctcttgagaaagtgcttcgtc 570 ||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| || Sbjct: 475 actctgctgctgcatcatcatttgaagatgccaaatctgctctggagaaagttcttcatc 534 Query: 571 atgaagatctgcaagaggcaccactactcgtattcgccaacaagcaggatctaccagcag 630 | || |||||||||| | || |||||| |||| || ||||||||||| ||||||||| Sbjct: 535 acgaggatctgcaaggagtgcctctactcatatttgcaaacaagcaggagttaccagcag 594 Query: 631 ctgtcacagaagaggaattggatagacatcttcaccttaaagagtttgatgagaggccat 690 |||| ||||| || || ||| ||| |||||||||||||||| ||| || |||||||||| Sbjct: 595 ctgtgacagaggaagagctggctaggcatcttcaccttaaagggttagacgagaggccat 654 Query: 691 atatgtttgttgcgggatctgcatatgatgggacggggatcaaactgggtatcgactggt 750 ||||||| || |||||||| || || |||||||| |||||| ||||| ||||||| Sbjct: 655 atatgttccaggctggatctgcctacgacgggacgggaatcaaagctggtattgactggt 714 Query: 751 tggtagaagaaatgggaaagagtaggcgcaccgagg 786 |||| |||||||||| || ||||| |||||||||| Sbjct: 715 tggtggaagaaatggaaaggagtaaacgcaccgagg 750
>gb|AF050675.1|AF050675 Oryza sativa GTP-binding protein mRNA, complete cds Length = 1079 Score = 452 bits (228), Expect = e-123 Identities = 489/576 (84%) Strand = Plus / Plus Query: 211 caatgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtg 270 ||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| || Sbjct: 67 caatgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatg 126 Query: 271 tgctcatccttggagtccataagtctgggaagacgaccttgctagaaaagttgaagtcaa 330 | | ||||||||||| || ||| |||||||||||||||||||||||||| ||||||||| Sbjct: 127 tagttatccttggagttcacaaggctgggaagacgaccttgctagaaaaggtgaagtcaa 186 Query: 331 tctatttgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaata 390 |||||||||||| |||| ||||||||||||| || | |||||| || |||||||||| Sbjct: 187 tctatttgaaagagaaaggccttccacatgatcgtatcgttccaacagttgggcttaata 246 Query: 391 ttggacgcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctg 450 ||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 247 ttggacgtattgaagatgccaatgttaaacttgttttctgggatctgggaggccagcctg 306 Query: 451 gcctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatgttatcg 510 ||||| |||| || |||||||||||||| || ||||| |||||| | |||||||||| | Sbjct: 307 gcctacgaacaatctgggagaaatattacgaagaggcacatgctgtcctatatgttattg 366 Query: 511 actctgcctctgcatcaacatttgaagatgccaaatctgctcttgagaaagtgcttcgtc 570 ||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| || Sbjct: 367 actctgctgctgcatcatcatttgaagatgccaaatctgctctggagaaagttcttcatc 426 Query: 571 atgaagatctgcaagaggcaccactactcgtattcgccaacaagcaggatctaccagcag 630 | |||||||||| || | || |||||| |||| || ||||||||||| | ||| ||| Sbjct: 427 acgaagatctgccaggagtgcctctactcatatttgcaaacaagcaggagtttccaccag 486 Query: 631 ctgtcacagaagaggaattggatagacatcttcaccttaaagagtttgatgagaggccat 690 |||| |||||||| || ||| ||| ||||||| |||||||| ||| || ||||| |||| Sbjct: 487 ctgtgacagaagaaaaactggctaggcatcttccccttaaagggttagacgagagcccat 546 Query: 691 atatgtttgttgcgggatctgcatatgatgggacggggatcaaactgggtatcgactggt 750 ||||||| | |||||||| || || |||||||| |||||| ||||| ||||||| Sbjct: 547 atatgttccagggtggatctgcctacgacgggacgggaatcaaaggtggtattgactggt 606 Query: 751 tggtagaagaaatgggaaagagtaggcgcaccgagg 786 |||| |||||||||| || ||||| |||||||||| Sbjct: 607 tggtggaagaaatggaaaggagtaaacgcaccgagg 642
>ref|NM_001056818.1| Oryza sativa (japonica cultivar-group) Os03g0392300 (Os03g0392300) mRNA, complete cds Length = 1250 Score = 206 bits (104), Expect = 1e-49 Identities = 350/432 (81%) Strand = Plus / Plus Query: 303 acgaccttgctagaaaagttgaagtcaatctatttgaaaggagaaggtcttccacatgat 362 ||||| ||||| |||||| | || || || ||| ||||||||||||| ||| ||| |||| Sbjct: 352 acgactttgctcgaaaagataaaatcgatttatctgaaaggagaagggcttacacctgat 411 Query: 363 cacattggtccaactgtggggcttaatattggacgcattgaagatgcaaatgtaaaactt 422 | ||| | ||| ||||| || ||||||||||| || |||||||||||||||| ||| ||| Sbjct: 412 cgcatcgttcccactgttggacttaatattggccgtattgaagatgcaaatgcaaagctt 471 Query: 423 gttttctgggatctgggaggtcagcctggcctaagaactatatgggagaaatattatgat 482 |||||||||||||||||||||||| ||| || | || || ||||| ||||||||| | Sbjct: 472 gttttctgggatctgggaggtcaggttggacttcgcacaatctgggaaaaatattatcaa 531 Query: 483 gaggctcatgctatagtatatgttatcgactctgcctctgcatcaacatttgaagatgcc 542 ||||| ||||||||| |||||||||| || ||||| |||||||| |||||||||||||| Sbjct: 532 gaggcccatgctataatatatgttattgatgctgccgctgcatcatcatttgaagatgcc 591 Query: 543 aaatctgctcttgagaaagtgcttcgtcatgaagatctgcaagaggcaccactactcgta 602 ||||||||||| || || || |||||||| || ||||| ||| |||||| || || || Sbjct: 592 aaatctgctctagaaaaggttcttcgtcacgaggatcttaaaggggcaccgctgctgata 651 Query: 603 ttcgccaacaagcaggatctaccagcagctgtcacagaagaggaattggatagacatctt 662 || || ||||| |||||| | |||| | |||| || || ||||| | |||| |||| Sbjct: 652 tttgcaaacaaacaggatttgccaggggtcatcactgatgaagaattagctagatatctg 711 Query: 663 caccttaaagagtttgatgagaggccatatatgtttgttgcgggatctgcatatgatggg 722 || ||||||||| | ||||||||||| || | |||| || | |||||| ||||||||| Sbjct: 712 cagcttaaagagctagatgagaggccgtacaagtttcaagctgtatctgcctatgatggg 771 Query: 723 acggggatcaaa 734 | |||||||||| Sbjct: 772 agggggatcaaa 783
>dbj|AK071779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110F23, full insert sequence Length = 1253 Score = 206 bits (104), Expect = 1e-49 Identities = 350/432 (81%) Strand = Plus / Plus Query: 303 acgaccttgctagaaaagttgaagtcaatctatttgaaaggagaaggtcttccacatgat 362 ||||| ||||| |||||| | || || || ||| ||||||||||||| ||| ||| |||| Sbjct: 355 acgactttgctcgaaaagataaaatcgatttatctgaaaggagaagggcttacacctgat 414 Query: 363 cacattggtccaactgtggggcttaatattggacgcattgaagatgcaaatgtaaaactt 422 | ||| | ||| ||||| || ||||||||||| || |||||||||||||||| ||| ||| Sbjct: 415 cgcatcgttcccactgttggacttaatattggccgtattgaagatgcaaatgcaaagctt 474 Query: 423 gttttctgggatctgggaggtcagcctggcctaagaactatatgggagaaatattatgat 482 |||||||||||||||||||||||| ||| || | || || ||||| ||||||||| | Sbjct: 475 gttttctgggatctgggaggtcaggttggacttcgcacaatctgggaaaaatattatcaa 534 Query: 483 gaggctcatgctatagtatatgttatcgactctgcctctgcatcaacatttgaagatgcc 542 ||||| ||||||||| |||||||||| || ||||| |||||||| |||||||||||||| Sbjct: 535 gaggcccatgctataatatatgttattgatgctgccgctgcatcatcatttgaagatgcc 594 Query: 543 aaatctgctcttgagaaagtgcttcgtcatgaagatctgcaagaggcaccactactcgta 602 ||||||||||| || || || |||||||| || ||||| ||| |||||| || || || Sbjct: 595 aaatctgctctagaaaaggttcttcgtcacgaggatcttaaaggggcaccgctgctgata 654 Query: 603 ttcgccaacaagcaggatctaccagcagctgtcacagaagaggaattggatagacatctt 662 || || ||||| |||||| | |||| | |||| || || ||||| | |||| |||| Sbjct: 655 tttgcaaacaaacaggatttgccaggggtcatcactgatgaagaattagctagatatctg 714 Query: 663 caccttaaagagtttgatgagaggccatatatgtttgttgcgggatctgcatatgatggg 722 || ||||||||| | ||||||||||| || | |||| || | |||||| ||||||||| Sbjct: 715 cagcttaaagagctagatgagaggccgtacaagtttcaagctgtatctgcctatgatggg 774 Query: 723 acggggatcaaa 734 | |||||||||| Sbjct: 775 agggggatcaaa 786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 305 gaccttgctagaaaagttgaagtcaatctatttgaaaggagaaggtcttccacatgatca 364 |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 25594356 gaccttgctagaaaaggtgaagtcaatctatttgaaagaggaaggccttccacatgatcg 25594297 Query: 365 cattggtccaactgtggggcttaatattggacgcattgaagatgcaaatgtaaaacttgt 424 || | |||||| || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 25594296 tatcgttccaacagttgggcttaatattggacgtattgaagatgccaatgtaaaacttgt 25594237 Query: 425 tttctgggatctgggagg 442 |||||||||||||||||| Sbjct: 25594236 tttctgggatctgggagg 25594219 Score = 113 bits (57), Expect = 1e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 445 agcctggcctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatg 504 ||||||||||| |||| || |||||||||||||| || ||||| |||||| | |||||| Sbjct: 25594067 agcctggcctacgaacaatctgggagaaatattacgaagaggcacatgctgtcatatatg 25594008 Query: 505 ttatcgactctgcctctgcatcaacatttgaagatgccaaatctgctct 553 |||| |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 25594007 ttattgactctgctgctgcatcatcatttgaagatgccaaatctgctct 25593959 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Minus Query: 211 caatgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtg 270 ||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| || Sbjct: 25594801 caatgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatg 25594742 Query: 271 tgctcatccttggagtccataagtctgggaagacg 305 | | ||||||||||| || ||| ||||||||||| Sbjct: 25594741 tagttatccttggagttcacaaggctgggaagacg 25594707 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 622 taccagcagctgtcacagaagaggaattggatagacatcttcaccttaaagagtttgatg 681 ||||||||||||| ||||| || || ||| ||| |||||||||||||||| ||| || | Sbjct: 25593225 taccagcagctgtgacagaggaagagctggctaggcatcttcaccttaaagggttagacg 25593166 Query: 682 agaggccatatatgtt 697 |||||||||||||||| Sbjct: 25593165 agaggccatatatgtt 25593150 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Minus Query: 721 ggacggggatcaaactgggtatcgactggttggtagaagaaatgggaaagagtaggcgca 780 ||||||| |||||| ||||| ||||||||||| |||||||||| || ||||| |||| Sbjct: 25592891 ggacgggaatcaaagctggtattgactggttggtggaagaaatggaaaggagtaaacgca 25592832 Query: 781 ccgagg 786 |||||| Sbjct: 25592831 ccgagg 25592826
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 178 bits (90), Expect = 3e-41 Identities = 126/138 (91%) Strand = Plus / Minus Query: 305 gaccttgctagaaaagttgaagtcaatctatttgaaaggagaaggtcttccacatgatca 364 |||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 48329 gaccttgctagaaaaggtgaagtcaatctatttgaaagaggaaggccttccacatgatcg 48270 Query: 365 cattggtccaactgtggggcttaatattggacgcattgaagatgcaaatgtaaaacttgt 424 || | |||||| || ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 48269 tatcgttccaacagttgggcttaatattggacgtattgaagatgccaatgtaaaacttgt 48210 Query: 425 tttctgggatctgggagg 442 |||||||||||||||||| Sbjct: 48209 tttctgggatctgggagg 48192 Score = 113 bits (57), Expect = 1e-21 Identities = 96/109 (88%) Strand = Plus / Minus Query: 445 agcctggcctaagaactatatgggagaaatattatgatgaggctcatgctatagtatatg 504 ||||||||||| |||| || |||||||||||||| || ||||| |||||| | |||||| Sbjct: 48040 agcctggcctacgaacaatctgggagaaatattacgaagaggcacatgctgtcatatatg 47981 Query: 505 ttatcgactctgcctctgcatcaacatttgaagatgccaaatctgctct 553 |||| |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 47980 ttattgactctgctgctgcatcatcatttgaagatgccaaatctgctct 47932 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Minus Query: 211 caatgttctccttgttccatggtctatggaaccatgtgttcagcaagacagagttccgtg 270 ||||||||||||||||| ||||||||||| | ||||| ||||||||| ||||||||| || Sbjct: 48774 caatgttctccttgttctatggtctatggcagcatgtcttcagcaaggcagagttccatg 48715 Query: 271 tgctcatccttggagtccataagtctgggaagacg 305 | | ||||||||||| || ||| ||||||||||| Sbjct: 48714 tagttatccttggagttcacaaggctgggaagacg 48680 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 622 taccagcagctgtcacagaagaggaattggatagacatcttcaccttaaagagtttgatg 681 ||||||||||||| ||||| || || ||| ||| |||||||||||||||| ||| || | Sbjct: 47198 taccagcagctgtgacagaggaagagctggctaggcatcttcaccttaaagggttagacg 47139 Query: 682 agaggccatatatgtt 697 |||||||||||||||| Sbjct: 47138 agaggccatatatgtt 47123 Score = 52.0 bits (26), Expect = 0.005 Identities = 56/66 (84%) Strand = Plus / Minus Query: 721 ggacggggatcaaactgggtatcgactggttggtagaagaaatgggaaagagtaggcgca 780 ||||||| |||||| ||||| ||||||||||| |||||||||| || ||||| |||| Sbjct: 46864 ggacgggaatcaaagctggtattgactggttggtggaagaaatggaaaggagtaaacgca 46805 Query: 781 ccgagg 786 |||||| Sbjct: 46804 ccgagg 46799
>gb|AC099323.6| Oryza sativa chromosome 3 BAC OSJNBa0065F09 genomic sequence, complete sequence Length = 115079 Score = 115 bits (58), Expect = 4e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 337 tgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaatattggac 396 ||||||||||||| ||| ||| ||||| ||| | ||| ||||| || ||||||||||| | Sbjct: 86678 tgaaaggagaagggcttacacctgatcgcatcgttcccactgttggacttaatattggcc 86737 Query: 397 gcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcag 446 | |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 86738 gtattgaagatgcaaatgcaaagcttgttttctgggatctgggaggtcag 86787 Score = 97.6 bits (49), Expect = 9e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 465 tgggagaaatattatgatgaggctcatgctatagtatatgttatcgactctgcctctgca 524 ||||| ||||||||| | ||||| ||||||||| |||||||||| || ||||| ||||| Sbjct: 87420 tgggaaaaatattatcaagaggcccatgctataatatatgttattgatgctgccgctgca 87479 Query: 525 tcaacatttgaagatgccaaatctgctct 553 ||| ||||||||||||||||||||||||| Sbjct: 87480 tcatcatttgaagatgccaaatctgctct 87508
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 115 bits (58), Expect = 4e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 337 tgaaaggagaaggtcttccacatgatcacattggtccaactgtggggcttaatattggac 396 ||||||||||||| ||| ||| ||||| ||| | ||| ||||| || ||||||||||| | Sbjct: 15581661 tgaaaggagaagggcttacacctgatcgcatcgttcccactgttggacttaatattggcc 15581720 Query: 397 gcattgaagatgcaaatgtaaaacttgttttctgggatctgggaggtcag 446 | |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 15581721 gtattgaagatgcaaatgcaaagcttgttttctgggatctgggaggtcag 15581770 Score = 97.6 bits (49), Expect = 9e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 465 tgggagaaatattatgatgaggctcatgctatagtatatgttatcgactctgcctctgca 524 ||||| ||||||||| | ||||| ||||||||| |||||||||| || ||||| ||||| Sbjct: 15582403 tgggaaaaatattatcaagaggcccatgctataatatatgttattgatgctgccgctgca 15582462 Query: 525 tcaacatttgaagatgccaaatctgctct 553 ||| ||||||||||||||||||||||||| Sbjct: 15582463 tcatcatttgaagatgccaaatctgctct 15582491
>dbj|AK227533.1| Arabidopsis thaliana mRNA for GTP-binding protein-like, complete cds, clone: RAFL14-14-G22 Length = 927 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 232 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 291 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 292 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 338
>ref|NM_124600.2| Arabidopsis thaliana ATGB1 (ATGB1) mRNA, complete cds Length = 1071 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 328 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 387 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 388 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 434
>ref|NM_180844.1| Arabidopsis thaliana ATGB1; GTP binding (ATGB1) mRNA, complete cds Length = 981 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 250 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 309 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 310 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 356
>gb|U46924.1|ATU46924 Arabidopsis thaliana GTP-binding protein ATGB1 mRNA, complete cds Length = 1082 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 339 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 398 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 399 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 445
>gb|AY085652.1| Arabidopsis thaliana clone 16621 mRNA, complete sequence Length = 981 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 250 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 309 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 310 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 356
>gb|BT004590.1| Arabidopsis thaliana At5g52210 gene, complete cds Length = 618 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 133 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 192 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcagcctgg 451 | | |||| ||| |||| |||||||||||||||||||||||||| Sbjct: 193 gtctccaatgctaaaattgtgttctgggatctgggaggtcagcctgg 239
>dbj|AB025603.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F17P19 Length = 48420 Score = 91.7 bits (46), Expect = 5e-15 Identities = 88/102 (86%) Strand = Plus / Plus Query: 345 gaaggtcttccacatgatcacattggtccaactgtggggcttaatattggacgcattgaa 404 ||||||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| Sbjct: 25931 gaaggtcttcctcatgatcgaattgttcctactgtggggcttaatattggtcgcattgaa 25990 Query: 405 gatgcaaatgtaaaacttgttttctgggatctgggaggtcag 446 | | |||| ||| |||| ||||||||||||||||||||| Sbjct: 25991 gtctccaatgctaaaattgtgttctgggatctgggaggtcag 26032
>gb|AC135312.19| Medicago truncatula clone mth2-34c3, complete sequence Length = 125616 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 913 gcacttcagcataatgtcatgat 935 ||||||||||||||||||||||| Sbjct: 105245 gcacttcagcataatgtcatgat 105223
>gb|DQ440363.1| Aedes aegypti clone AET-4726 ADP-ribosylation factor 6 mRNA, complete cds Length = 528 Score = 46.1 bits (23), Expect = 0.28 Identities = 26/27 (96%) Strand = Plus / Plus Query: 601 tattcgccaacaagcaggatctaccag 627 |||| |||||||||||||||||||||| Sbjct: 356 tatttgccaacaagcaggatctaccag 382
>emb|AL109752.14|HSJ321O10 Human DNA sequence from clone RP1-321O10 on chromosome Xq13.1-21.2 Contains the 5' end of the DACH2 gene for dachshund homolog 2 (Drosophila), aeukaryotic translation elongation factor 1 alpha 1 (EEF1A1) pseudogene and a CpG island, complete sequence Length = 79562 Score = 46.1 bits (23), Expect = 0.28 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1074 tgttcatatcatgttcatatgatcttccttt 1104 |||||| |||||||| ||||||||||||||| Sbjct: 52202 tgttcacatcatgttgatatgatcttccttt 52232
>gb|AC130653.31| Medicago truncatula clone mth1-13b3, complete sequence Length = 166135 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Minus Query: 913 gcacttcagcataatgtcatgat 935 ||||||||||||||||||||||| Sbjct: 58160 gcacttcagcataatgtcatgat 58138
>gb|AC148776.12| Medicago truncatula clone mth2-39g6, complete sequence Length = 109378 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 913 gcacttcagcataatgtcatgat 935 ||||||||||||||||||||||| Sbjct: 101494 gcacttcagcataatgtcatgat 101516
>emb|CT573026.5| M.truncatula DNA sequence from clone MTH2-39M4 on chromosome 3, complete sequence Length = 109386 Score = 46.1 bits (23), Expect = 0.28 Identities = 23/23 (100%) Strand = Plus / Plus Query: 913 gcacttcagcataatgtcatgat 935 ||||||||||||||||||||||| Sbjct: 101496 gcacttcagcataatgtcatgat 101518
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 603 ttcgccaacaagcaggatctac 624 |||||||||||||||||||||| Sbjct: 3430453 ttcgccaacaagcaggatctac 3430432
>gb|DQ440221.1| Aedes aegypti clone AET-249 GTP-binding ADP-ribosylation factor Arf1 mRNA, complete cds Length = 549 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 601 tattcgccaacaagcaggatctacca 626 ||||||||||||| |||||||||||| Sbjct: 368 tattcgccaacaaacaggatctacca 393
>gb|AY735999.1| Aedes aegypti ADP ribosylation factor 79F mRNA, complete cds Length = 747 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 601 tattcgccaacaagcaggatctacca 626 ||||||||||||| |||||||||||| Sbjct: 370 tattcgccaacaaacaggatctacca 395
>gb|AF045644.1| Caenorhabditis elegans cosmid F57H12, complete sequence Length = 20803 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 15766 ctcgttttcgccaacaagcaggatct 15791
>ref|XM_753734.1| Ustilago maydis 521 hypothetical protein (UM02680.1) partial mRNA Length = 546 Score = 44.1 bits (22), Expect = 1.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 606 gccaacaagcaggatctaccag 627 |||||||||||||||||||||| Sbjct: 382 gccaacaagcaggatctaccag 403
>ref|NM_068935.2| Caenorhabditis elegans ADP-Ribosylation Factor related family member (arf-3) (arf-3) mRNA, complete cds Length = 1018 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 383 ctcgttttcgccaacaagcaggatct 408
>emb|BX066502.1|CNS09NH6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC5DD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 329 ctcgtgttcgccaacaagcaggatct 304
>emb|BX066501.1|CNS09NH5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5DD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 987 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 602 ctcgtgttcgccaacaagcaggatct 627
>emb|BX047953.1|CNS0995X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22DC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 979 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 584 ctcgtgttcgccaacaagcaggatct 609
>emb|BX043774.1|CNS095XU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC16CD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 899 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 320 ctcgtgttcgccaacaagcaggatct 295
>emb|BX043773.1|CNS095XT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC16CD04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 959 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 598 ctcgtgttcgccaacaagcaggatct 623
>emb|BX039267.1|CNS092GN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC1AB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 360 ctcgtgttcgccaacaagcaggatct 335
>emb|BX039266.1|CNS092GM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1AB09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1042 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 655 ctcgtgttcgccaacaagcaggatct 680
>emb|BX029929.1|CNS08V99 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA44CH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 999 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 643 ctcgtgttcgccaacaagcaggatct 668
>ref|XM_960150.1| Neurospora crassa OR74A ADP-RIBOSYLATION FACTOR (NCU08340.1) partial mRNA Length = 558 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 373 ctcgtcttcgccaacaagcaggatct 398
>ref|XM_311973.2| Anopheles gambiae str. PEST ENSANGP00000011061 (ENSANGG00000008572), mRNA Length = 988 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 643 ctcgtgttcgccaacaagcaggatct 668
>gb|AY519855.1| Caenorhabditis elegans essential ADP-ribosylation factor related, (20.5 kD) (arf-3) complete mRNA Length = 1008 Score = 44.1 bits (22), Expect = 1.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatct 622 ||||| |||||||||||||||||||| Sbjct: 383 ctcgttttcgccaacaagcaggatct 408
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gctgatgttgttgatctcgtg 907 ||||||||||||||||||||| Sbjct: 17663302 gctgatgttgttgatctcgtg 17663282
>gb|AY772689.1| Erithacus rubecula cryptochrome 2 mRNA, partial cds Length = 647 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 gatctaccagcagctgtcaca 638 ||||||||||||||||||||| Sbjct: 123 gatctaccagcagctgtcaca 143
>gb|AC150577.4| Bos taurus BAC CH240-268P24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167618 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 ccaaatctgctcttgagaaag 561 ||||||||||||||||||||| Sbjct: 9904 ccaaatctgctcttgagaaag 9924
>ref|XM_506076.1| Yarrowia lipolytica CLIB122, YALI0F31009g predicted mRNA Length = 531 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 597 ctcgtattcgccaacaagcaggatc 621 ||||| ||||||||||||||||||| Sbjct: 346 ctcgttttcgccaacaagcaggatc 370
>gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, complete sequence Length = 205074 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 tgaaaggagaaggtcttccac 357 ||||||||||||||||||||| Sbjct: 145627 tgaaaggagaaggtcttccac 145607
>gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome 14, complete sequence Length = 187377 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1095 atcttccttttgttgaaacat 1115 ||||||||||||||||||||| Sbjct: 73842 atcttccttttgttgaaacat 73862
>emb|CT025590.5| Mouse DNA sequence from clone RP24-132A1 on chromosome 14, complete sequence Length = 193572 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1095 atcttccttttgttgaaacat 1115 ||||||||||||||||||||| Sbjct: 76263 atcttccttttgttgaaacat 76243
>gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, complete sequence Length = 128182 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tgaagatgcaaatgtaaaacttgtt 425 |||||||| |||||||||||||||| Sbjct: 69462 tgaagatggaaatgtaaaacttgtt 69438
>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15, complete sequence Length = 156236 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 aaatgtaaaacttgttttctg 430 ||||||||||||||||||||| Sbjct: 24112 aaatgtaaaacttgttttctg 24132
>emb|AL606703.6| Zebrafish DNA sequence from clone BUSM1-181A10 in linkage group 14 Contains the 5' part of the robo2 gene for roundabout homolog 2 and two CpG islands, complete sequence Length = 76265 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 aaatgtaaaacttgttttctg 430 ||||||||||||||||||||| Sbjct: 24704 aaatgtaaaacttgttttctg 24684
>gb|AC016614.6|AC016614 Homo sapiens chromosome 5 clone CTD-2217F15, complete sequence Length = 109314 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 401 tgaagatgcaaatgtaaaacttgtt 425 |||||||| |||||||||||||||| Sbjct: 71216 tgaagatggaaatgtaaaacttgtt 71192
>gb|AC096733.3| Homo sapiens BAC clone RP11-102N12 from 4, complete sequence Length = 189031 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 858 tgagaagcacaaagcatttgaggac 882 |||||||||||||||||||| |||| Sbjct: 114858 tgagaagcacaaagcatttgtggac 114882
>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR42I20, complete sequence Length = 164944 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 887 gctgatgttgttgatctcgtg 907 ||||||||||||||||||||| Sbjct: 91874 gctgatgttgttgatctcgtg 91854
>gb|AF139762.1|AF139762 Colorado tick fever virus segment 6 strain Florio VP6 gene, complete cds Length = 2141 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 acatgatcacattggtccaac 376 ||||||||||||||||||||| Sbjct: 1954 acatgatcacattggtccaac 1934
>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence Length = 222809 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1098 ttccttttgttgaaacatcct 1118 ||||||||||||||||||||| Sbjct: 81441 ttccttttgttgaaacatcct 81421
>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete sequence Length = 110096 Score = 42.1 bits (21), Expect = 4.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 caatctatttgaaaggagaag 348 ||||||||||||||||||||| Sbjct: 105442 caatctatttgaaaggagaag 105422
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 4.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 597 ctcgtattcgccaacaagcaggatc 621 ||||| ||||||||||||||||||| Sbjct: 3867340 ctcgttttcgccaacaagcaggatc 3867316 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 201,207,258 Number of extensions: 10656624 Number of successful extensions: 197113 Number of sequences better than 10.0: 57 Number of HSP's gapped: 197098 Number of HSP's successfully gapped: 70 Length of query: 1149 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1126 Effective length of database: 18,503,978,556 Effective search space: 20835479854056 Effective search space used: 20835479854056 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)