Clone Information

BLAST Search Result

Clone Name	FLbaf26b24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	emb\|CT829523.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	56	4e-04
2	ref\|NM_001065180.1\| Oryza sativa (japonica cultivar-group) Os06g...	56	4e-04
3	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	56	4e-04
4	dbj\|AP005750.3\| Oryza sativa (japonica cultivar-group) genomic D...	56	4e-04
5	dbj\|AP004685.3\| Oryza sativa (japonica cultivar-group) genomic D...	56	4e-04
6	dbj\|AK119632.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	56	4e-04
7	dbj\|AK111637.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	56	4e-04
8	gb\|AC151804.1\| Solanum demissum chromosome 5 clone PGEC475B22, c...	48	0.090
9	gb\|AC119149.2\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.090
10	gb\|AC021892.16\| Genomic sequence for Oryza sativa, Nipponbare st...	48	0.090
11	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.090
12	emb\|AJ242867.1\|APC242867 Anabaena PCC7120 ipt gene, gltA gene, n...	44	1.4
13	gb\|DQ822986.1\| Glycine max MYB transcription factor MYB140 (MYB1...	42	5.5
14	ref\|NM_123085.1\| Arabidopsis thaliana DNA binding / transcriptio...	42	5.5
15	gb\|AY519515.1\| Arabidopsis thaliana MYB transcription factor (At...	42	5.5
16	gb\|BT010947.1\| Arabidopsis thaliana At5g37260 gene, complete cds	42	5.5
17	dbj\|AB017069.1\| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	5.5
18	emb\|BX834098.1\|CNS09YY5 Arabidopsis thaliana Full-length cDNA Co...	42	5.5
19	gb\|AC127698.5\| Mus musculus BAC clone RP24-113N24 from 3, comple...	42	5.5
20	gb\|AC134571.4\| Mus musculus BAC clone RP23-435E17 from 3, comple...	42	5.5

>emb|CT829523.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA128H13, full
           insert sequence
          Length = 1936
 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 186 tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
           ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 765 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 824

                               
Query: 246 cagtcggatgcttttggatc 265
           ||||| ||||||||||||||
Sbjct: 825 cagtcagatgcttttggatc 844



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 3   tgaagctgtatggccggtcctggcgtcagatacaag 38
           ||||||||||||| || || ||||||||||||||||
Sbjct: 520 tgaagctgtatggtcgctcttggcgtcagatacaag 555



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
           ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 651 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 710



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1086 tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
            |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 1512 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 1570



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 441  gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
            |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 1044 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 1103

              
Query: 501  aa 502
            ||
Sbjct: 1104 aa 1105

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>ref|NM_001065180.1| Oryza sativa (japonica cultivar-group) Os06g0728700 (Os06g0728700)
           mRNA, complete cds
          Length = 1940

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 186 tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
           ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 755 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 814

                               
Query: 246 cagtcggatgcttttggatc 265
           ||||| ||||||||||||||
Sbjct: 815 cagtcagatgcttttggatc 834



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 3   tgaagctgtatggccggtcctggcgtcagatacaag 38
           ||||||||||||| || || ||||||||||||||||
Sbjct: 510 tgaagctgtatggtcgctcttggcgtcagatacaag 545



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
           ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 641 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 700



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1086 tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
            |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 1502 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 1560



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 441  gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
            |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 1034 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 1093

              
Query: 501  aa 502
            ||
Sbjct: 1094 aa 1095

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 186      tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
                ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 30511337 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 30511278

                                    
Query: 246      cagtcggatgcttttggatc 265
                ||||| ||||||||||||||
Sbjct: 30511277 cagtcagatgcttttggatc 30511258



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                       
Query: 3        tgaagctgtatggccggtcctggcgtcagatacaaggtg 41
                ||||||||||||| || || |||||||||||||||||||
Sbjct: 30511861 tgaagctgtatggtcgctcttggcgtcagatacaaggtg 30511823



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 72       gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
                ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 30511451 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 30511392



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                           
Query: 1086     tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
                |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 30510498 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 30510440



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 441      gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
                |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 30510966 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 30510907

                  
Query: 501      aa 502
                ||
Sbjct: 30510906 aa 30510905

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>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0069C14
          Length = 150579

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 186  tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
            ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 9900 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 9841

                                
Query: 246  cagtcggatgcttttggatc 265
            ||||| ||||||||||||||
Sbjct: 9840 cagtcagatgcttttggatc 9821



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 3     tgaagctgtatggccggtcctggcgtcagatacaaggtg 41
             ||||||||||||| || || |||||||||||||||||||
Sbjct: 10424 tgaagctgtatggtcgctcttggcgtcagatacaaggtg 10386



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 72    gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
             ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 10014 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 9955



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 1086 tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
            |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 9061 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 9003



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
            |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 9529 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 9470

              
Query: 501  aa 502
            ||
Sbjct: 9469 aa 9468

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>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017G10
          Length = 166700

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                          
Query: 186    tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
              ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 148698 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 148639

                                  
Query: 246    cagtcggatgcttttggatc 265
              ||||| ||||||||||||||
Sbjct: 148638 cagtcagatgcttttggatc 148619



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 3      tgaagctgtatggccggtcctggcgtcagatacaaggtg 41
              ||||||||||||| || || |||||||||||||||||||
Sbjct: 149222 tgaagctgtatggtcgctcttggcgtcagatacaaggtg 149184



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 72     gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
              ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 148812 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 148753



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 1086   tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
              |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 147859 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 147801



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                          
Query: 441    gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
              |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 148327 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 148268

                
Query: 501    aa 502
              ||
Sbjct: 148267 aa 148266

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>dbj|AK119632.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E11, full
           insert sequence
          Length = 1931

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 186 tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
           ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 757 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 816

                               
Query: 246 cagtcggatgcttttggatc 265
           ||||| ||||||||||||||
Sbjct: 817 cagtcagatgcttttggatc 836



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 3   tgaagctgtatggccggtcctggcgtcagatacaag 38
           ||||||||||||| || || ||||||||||||||||
Sbjct: 512 tgaagctgtatggtcgctcttggcgtcagatacaag 547



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
           ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 643 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 702



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1086 tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
            |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 1504 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 1562



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 441  gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
            |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 1036 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 1095

              
Query: 501  aa 502
            ||
Sbjct: 1096 aa 1097

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>dbj|AK111637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123B09, full
           insert sequence
          Length = 1942

 Score = 56.0 bits (28), Expect = 4e-04
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 186 tcatcatcttctggttctgaccaagggaatggttctcccgtgtcagtgttgtctgcaatg 245
           ||||| || ||||| ||||| |||| ||||||||||||  | || ||| | ||||| |||
Sbjct: 757 tcatcttcatctggctctgatcaagagaatggttctcctatatcggtgctatctgcgatg 816

                               
Query: 246 cagtcggatgcttttggatc 265
           ||||| ||||||||||||||
Sbjct: 817 cagtcagatgcttttggatc 836



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 3   tgaagctgtatggccggtcctggcgtcagatacaag 38
           ||||||||||||| || || ||||||||||||||||
Sbjct: 512 tgaagctgtatggtcgctcttggcgtcagatacaag 547



 Score = 48.1 bits (24), Expect = 0.090
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatccatatcctcgcaagcgtgcg 131
           ||||||||||| |||||||||||||| || || || ||||| || ||||| ||| |||||
Sbjct: 643 gagatccctccacctaggccaaagagaaaaccacttcatccgtaccctcgaaagtgtgcg 702



 Score = 46.1 bits (23), Expect = 0.36
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1086 tcagcttcaagttttcagctaaaaccaagcgagaactcggcttttgtgagagtgaagcc 1144
            |||| |||||||||| |||||||||| ||||  || || || ||||| |||||||||||
Sbjct: 1504 tcaggttcaagttttgagctaaaaccgagcgcaaattcagcgtttgtaagagtgaagcc 1562



 Score = 44.1 bits (22), Expect = 1.4
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 441  gaggtgcaggtaacaagcgtgaagctgttcgggaagacggtcgtcatcccagacccgagg 500
            |||||||| | ||||||| ||||||| || |||| ||| || ||||||||||| || |||
Sbjct: 1036 gaggtgcaagaaacaagcttgaagctatttgggaggacagttgtcatcccagatccaagg 1095

              
Query: 501  aa 502
            ||
Sbjct: 1096 aa 1097

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>gb|AC151804.1| Solanum demissum chromosome 5 clone PGEC475B22, complete sequence
          Length = 104138

 Score = 48.1 bits (24), Expect = 0.090
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 78     cctccccctaggccaaagaggaagccgctgcatccatatcctcgcaag 125
              ||||| ||| ||||||||| ||| || ||||||||||| |||||||||
Sbjct: 100554 cctcctcctcggccaaagaagaaacctctgcatccataccctcgcaag 100601



 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1175   ggggtttgtgccatacaaaagatgt 1199
              ||||||||| |||||||||||||||
Sbjct: 101562 ggggtttgtaccatacaaaagatgt 101586

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>gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNBb0079E01, complete sequence
          Length = 132870

 Score = 48.1 bits (24), Expect = 0.090
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 384  aaggaggctgatcaggaaaacaaa 407
            ||||||||||||||||||||||||
Sbjct: 6157 aaggaggctgatcaggaaaacaaa 6180

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>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0053D03, from chromosome 10, complete sequence
          Length = 199113

 Score = 48.1 bits (24), Expect = 0.090
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 384    aaggaggctgatcaggaaaacaaa 407
              ||||||||||||||||||||||||
Sbjct: 169933 aaggaggctgatcaggaaaacaaa 169956

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 48.1 bits (24), Expect = 0.090
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 384     aaggaggctgatcaggaaaacaaa 407
               ||||||||||||||||||||||||
Sbjct: 8086546 aaggaggctgatcaggaaaacaaa 8086523

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>emb|AJ242867.1|APC242867 Anabaena PCC7120 ipt gene, gltA gene, ndhAIGE gene cluster, ORF1 and
            ORF2
          Length = 6376

 Score = 44.1 bits (22), Expect = 1.4
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 341  cagcagagaggaaggtcaacaa 362
            ||||||||||||||||||||||
Sbjct: 2754 cagcagagaggaaggtcaacaa 2775

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>gb|DQ822986.1| Glycine max MYB transcription factor MYB140 (MYB140) mRNA, partial
           cds
          Length = 479

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 78  cctccccctaggccaaagaggaagccgctgcatccatatcc 118
           ||||| ||| |||| |||||||| || ||||||||||||||
Sbjct: 390 cctcctcctcggcctaagaggaaacccctgcatccatatcc 430

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>ref|NM_123085.1| Arabidopsis thaliana DNA binding / transcription factor (AT5G37260)
           mRNA, complete cds
          Length = 864

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatcc 112
           |||||||| || || ||||||||||| |||||| |||||||
Sbjct: 286 gagatcccgcctccaaggccaaagagaaagccgatgcatcc 326

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>gb|AY519515.1| Arabidopsis thaliana MYB transcription factor (At5g37260) mRNA,
           complete cds
          Length = 864

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatcc 112
           |||||||| || || ||||||||||| |||||| |||||||
Sbjct: 286 gagatcccgcctccaaggccaaagagaaagccgatgcatcc 326

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>gb|BT010947.1| Arabidopsis thaliana At5g37260 gene, complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatcc 112
           |||||||| || || ||||||||||| |||||| |||||||
Sbjct: 425 gagatcccgcctccaaggccaaagagaaagccgatgcatcc 465

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>dbj|AB017069.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ8
          Length = 88128

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 72    gagatccctccccctaggccaaagaggaagccgctgcatcc 112
             |||||||| || || ||||||||||| |||||| |||||||
Sbjct: 20501 gagatcccgcctccaaggccaaagagaaagccgatgcatcc 20461

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>emb|BX834098.1|CNS09YY5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZF10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1046

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 72  gagatccctccccctaggccaaagaggaagccgctgcatcc 112
           |||||||| || || ||||||||||| |||||| |||||||
Sbjct: 433 gagatcccgcctccaaggccaaagagaaagccgatgcatcc 473

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>gb|AC127698.5| Mus musculus BAC clone RP24-113N24 from 3, complete sequence
          Length = 174669

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 445   tgcaggtaacaagcgtgaagctgtt 469
             |||||||||||||| ||||||||||
Sbjct: 85912 tgcaggtaacaagcatgaagctgtt 85888

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>gb|AC134571.4| Mus musculus BAC clone RP23-435E17 from 3, complete sequence
          Length = 198578

 Score = 42.1 bits (21), Expect = 5.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 445   tgcaggtaacaagcgtgaagctgtt 469
             |||||||||||||| ||||||||||
Sbjct: 50354 tgcaggtaacaagcatgaagctgtt 50378


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 242,881,775
Number of extensions: 11906015
Number of successful extensions: 212312
Number of sequences better than 10.0: 20
Number of HSP's gapped: 212312
Number of HSP's successfully gapped: 49
Length of query: 1458
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1435
Effective length of database: 18,503,978,556
Effective search space: 26553209227860
Effective search space used: 26553209227860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result