ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf35a24 |
|---|---|
| Clone Library Name | barley_pub |
>P15270:SP60_DICDI Spore coat protein SP60 precursor - Dictyostelium discoideum (Slime| mold) Length = 424 Score = 35.0 bits (79), Expect = 0.31 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +3 Query: 204 PYRPEPEPCKTQAMYFKNCLLRGHGKMCCSGVVADPSCYCEVEREVEIQCTPDHHC 371 P+RP P C+T+ C + GK CC + D C +++C H C Sbjct: 110 PWRPYPPVCRTRCPEGHECKVDEWGKECCVKIKCDDIC--------DLRCPKGHEC 157
>Q2UGU3:SPT5_ASPOR Transcription elongation factor spt5 - Aspergillus oryzae| Length = 1026 Score = 34.7 bits (78), Expect = 0.40 Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Frame = +1 Query: 286 AAPAWW---RTPRATARWSGR--WRSSAHPTTTAMAPPGGSRSPRWTSPA*RTSSASMRE 450 A P+ W RTP A A S W ++ T A A GGSR+P W + RTS+ Sbjct: 803 APPSGWQGGRTPMAAADSSRTPAWGGASSARTPAWAGMGGSRTPAWKNDGSRTSNPYDGS 862 Query: 451 RDGLG 465 R G Sbjct: 863 RTAYG 867
>P14501:NEOR_STRCY Neomycin resistance protein - Streptomyces cyanogenus| Length = 437 Score = 33.1 bits (74), Expect = 1.2 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 316 ATARWSGRWRSSAHPT----TTAMAPPGGSRSPRWTSPA*RTSSAS 441 A W RWR S T T PP G+RSP T+ A T+S S Sbjct: 178 ALTEWEDRWRRSGPATLARSTPGFRPPTGARSPGATAGARATASTS 223
>Q4WP96:SPT5_ASPFU Transcription elongation factor spt5 - Aspergillus fumigatus| (Sartorya fumigata) Length = 1058 Score = 32.3 bits (72), Expect = 2.0 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 5/68 (7%) Frame = +1 Query: 277 ARCAAPAWW---RTPRATARWSGR--WRSSAHPTTTAMAPPGGSRSPRWTSPA*RTSSAS 441 A A P+ W RTP A A S W ++ T A A GSR+P W RTS+ Sbjct: 834 ASAAPPSGWSGGRTPMAAADSSRTPAWGGASSARTPAWAGISGSRTPAWKMDGSRTSNPY 893 Query: 442 MRERDGLG 465 R G Sbjct: 894 DGSRTAYG 901
>Q9QYH6:MAGD1_MOUSE Melanoma-associated antigen D1 - Mus musculus (Mouse)| Length = 775 Score = 32.3 bits (72), Expect = 2.0 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 331 SGRWRSSAHPTTTAMAPPGGSRSPRWTSP 417 SG WRS+ P TT PPG + W +P Sbjct: 267 SGNWRSAPVPVTTQQNPPGAPPNVVWQTP 295
>P49606:CYAA_USTMA Adenylate cyclase - Ustilago maydis (Smut fungus)| Length = 2493 Score = 32.3 bits (72), Expect = 2.0 Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 7/101 (6%) Frame = +1 Query: 271 GTARCAAPAWWRTPRATARWS--GRWRSSAHPTTTAMAPPGGSRSPRWTSPA*RTSSASM 444 G R +P+ +TP A + S S +H + ++AP G R+P T+ + TSSAS Sbjct: 495 GVYRSPSPS--QTPIAERQTSVTSTVESPSHASEASLAPSGSLRTPSRTTASTSTSSAST 552 Query: 445 RERDGLGRL-----RHLITRLILAASYYYKSIACMSRLCAD 552 D L R+ + RL LA Y+S+ +S D Sbjct: 553 VLSDRLPSQVNMLPRNSVPRLSLAEMQNYQSLRKLSNNLID 593
>P54643:SP87_DICDI Spore coat protein SP87 precursor - Dictyostelium discoideum (Slime| mold) Length = 677 Score = 32.3 bits (72), Expect = 2.0 Identities = 20/79 (25%), Positives = 30/79 (37%) Frame = +3 Query: 204 PYRPEPEPCKTQAMYFKNCLLRGHGKMCCSGVVADPSCYCEVEREVEIQCTPDHHCHGAA 383 P+ P+ E C + C + HGK CC V P C + +C +H Sbjct: 506 PHPPQHEKCNKRCPPGHECKVDQHGKECCV-VAHRPPPKCSLRCPPRHECRVNHFGEECC 564 Query: 384 RRVKVAEMDLPCMKDLKCK 440 +V + L C +CK Sbjct: 565 VKVHHDKCSLRCPPGHECK 583 Score = 30.8 bits (68), Expect = 5.9 Identities = 15/50 (30%), Positives = 19/50 (38%) Frame = +3 Query: 213 PEPEPCKTQAMYFKNCLLRGHGKMCCSGVVADPSCYCEVEREVEIQCTPD 362 P PE C + C HGK CC + D C + R E + D Sbjct: 446 PPPEVCSLRCPPKHECKFDDHGKKCCVKIHCDEVCDLDCGRGFECKIRHD 495
>Q5VTJ3:KLD7A_HUMAN Kelch domain-containing protein 7A precursor - Homo sapiens (Human)| Length = 937 Score = 32.0 bits (71), Expect = 2.6 Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = +1 Query: 271 GTARCAAPAWWR-TPRATARWS-GRWRSSAHPTTTAMAPPGGSRSPR 405 G AR A P WWR T +TA S W S T A AP G+ +PR Sbjct: 807 GAARTARPRWWRSTAFSTALTSTAAWASPC--TAAAPAPGSGTSAPR 851
>A1A4J8:SCO1_BOVIN SCO1 protein homolog, mitochondrial precursor - Bos taurus (Bovine)| Length = 305 Score = 30.4 bits (67), Expect = 7.6 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 8/40 (20%) Frame = +1 Query: 313 RATARWSGRWRSS--------AHPTTTAMAPPGGSRSPRW 408 R AR WR+S + P +TAM PP GS P W Sbjct: 43 RLCARPEEAWRASGLAACCLGSRPLSTAMPPPPGSSGPEW 82
>P96195:LEU2_AZOVI 3-isopropylmalate dehydratase large subunit - Azotobacter| vinelandii Length = 470 Score = 30.0 bits (66), Expect = 10.0 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 9/84 (10%) Frame = +1 Query: 283 CAAPAWWRTPRATARWSGRWRSSAHPTTT---------AMAPPGGSRSPRWTSPA*RTSS 435 C AP W R+ R W+G SS+ P ++ AM P S TS+ Sbjct: 379 CRAPGWSRSRRRRRGWTG---SSSRPVSSGATGCSMCLAMNPDRLESGEHCAS----TSN 431 Query: 436 ASMRERDGLGRLRHLITRLILAAS 507 + R G G HL++ + AA+ Sbjct: 432 RNFEGRQGAGGRTHLVSPAMAAAA 455
>P28284:ICP0_HHV2H Trans-acting transcriptional protein ICP0 - Human herpesvirus 2| (strain HG52) (HHV-2) (Human herpes simplex virus 2) Length = 825 Score = 30.0 bits (66), Expect = 10.0 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +1 Query: 292 PAWWRTPRATARWSGRWRSSAHPTTTAMAPPGGSRS 399 PA R PR +G R ++ P T APPG RS Sbjct: 257 PAPRRAPRRGGGGAGATRGTSQPAATRPAPPGAPRS 292 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 113,981,846 Number of extensions: 2301506 Number of successful extensions: 6080 Number of sequences better than 10.0: 11 Number of HSP's gapped: 6077 Number of HSP's successfully gapped: 12 Length of query: 251 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 140 Effective length of database: 70,239,694 Effective search space: 9833557160 Effective search space used: 9833557160 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
