ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf34p18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK061479:Os05g0163100 | 34 | 0.21 | 2 | Os02g0164200:Os02g0164200 | 33 | 0.46 | 3 | AK110164: | 32 | 0.60 | 4 | AK104982:Os03g0100200 | 32 | 0.60 | 5 | AK072547:Os03g0100200 | 32 | 0.60 | 6 | AK068188:Os03g0399600 | 32 | 0.78 | 7 | Os02g0735500:Os02g0735500 | 31 | 1.7 | 8 | AK122118:Os01g0101600 | 31 | 1.7 | 9 | AK102536:Os09g0252100 | 31 | 1.7 | 10 | AK099952:Os01g0101600 | 31 | 1.7 | 11 | Os06g0587500:Os06g0587500 | 30 | 2.3 | 12 | AY594285:Os05g0170200 | 30 | 2.3 | 13 | AK063611:Os05g0170200 | 30 | 2.3 | 14 | AK070363:Os01g0107900 | 30 | 2.3 | 15 | AK059944:Os09g0287500 | 30 | 2.3 | 16 | Os06g0101900:Os06g0101900 | 30 | 3.9 | 17 | AK110099: | 30 | 3.9 | 18 | AK067772:Os02g0679500 | 30 | 3.9 | 19 | AY224437:Os05g0223000 | 29 | 5.1 | 20 | AK119387:Os07g0496300 | 29 | 5.1 | 21 | AK102859:Os08g0528700 | 29 | 5.1 | 22 | Os04g0577900:Os04g0577900 | 29 | 6.6 | 23 | AK109253: | 29 | 6.6 | 24 | AK106479:Os11g0554200 | 28 | 8.6 | 25 | Os04g0468100:Os04g0468100 | 28 | 8.6 | 26 | AK119363:Os01g0809000 | 28 | 8.6 | 27 | AK102958:Os11g0149100 | 28 | 8.6 |
|---|
>AK061479:Os05g0163100 | Length = 266 Score = 33.9 bits (76), Expect = 0.21 Identities = 26/82 (31%), Positives = 39/82 (47%) Frame = +2 Query: 176 SPLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQPS 355 SPL RI +T S R + P RA +LP P ++ + + AG A+ + PS Sbjct: 7 SPLLRIA---ITSSSPLLASPRRRSPHPRAASLPWTHPTAATAAEAAAAGAAAVPPLAPS 63 Query: 356 SSRRRCRLSDPPCASPSTSPEP 421 + R + P A PS++P P Sbjct: 64 RTSSR---TSAPAAPPSSAPSP 82
>Os02g0164200:Os02g0164200 | Length = 140 Score = 32.7 bits (73), Expect = 0.46 Identities = 32/84 (38%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Frame = +2 Query: 173 PSPLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSAS---IPSLRAGRGAMFF 343 P P AR R RSP TRP P RR RSSAS P+ G A Sbjct: 17 PRPHARSRRVGPPRSPPTRPMPCRPPPYRRR--------RSSASWALWPAAGGGDRAPLL 68 Query: 344 VQPSSSRRRCRLSDPPCASPSTSP 415 PS+ R S PP PS+SP Sbjct: 69 PPPSA-----RCSSPPARRPSSSP 87
>AK110164: | Length = 944 Score = 32.3 bits (72), Expect = 0.60 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -1 Query: 352 RLDEEHSSSPCSKARNGCGRTRRNSRECSRTPERPLDASTRASQR 218 R+ + C KA+ C R++++ CSR + LD S AS+R Sbjct: 11 RIRNSQACLECRKAKIKCNGKRKDAQNCSRCEAKGLDCSWTASRR 55
>AK104982:Os03g0100200 | Length = 203 Score = 32.3 bits (72), Expect = 0.60 Identities = 28/84 (33%), Positives = 34/84 (40%) Frame = +2 Query: 173 PSPLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQP 352 P+P A R L + T P V R+G P + S S P L A R P Sbjct: 120 PTPAAS-STRWLAGASSTTPTACVCSASGRSGTKPAATSSSPGSTPRLTAPRPPSSSRPP 178 Query: 353 SSSRRRCRLSDPPCASPSTSPEPR 424 + S CR PP ASPS + R Sbjct: 179 TRSGPSCR-RPPPAASPSMTSSSR 201
>AK072547:Os03g0100200 | Length = 203 Score = 32.3 bits (72), Expect = 0.60 Identities = 28/84 (33%), Positives = 34/84 (40%) Frame = +2 Query: 173 PSPLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQP 352 P+P A R L + T P V R+G P + S S P L A R P Sbjct: 120 PTPAAS-STRWLAGASSTTPTACVCSASGRSGTKPAATSSSPGSTPRLTAPRPPSSSRPP 178 Query: 353 SSSRRRCRLSDPPCASPSTSPEPR 424 + S CR PP ASPS + R Sbjct: 179 TRSGPSCR-RPPPAASPSMTSSSR 201
>AK068188:Os03g0399600 | Length = 99 Score = 32.0 bits (71), Expect = 0.78 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = +2 Query: 251 PLRRAGALPGVSPRSSA---SIPSLRAG--RGAMFFVQPSSSRRRCRL-SDPPCASPSTS 412 PL RA P P S+ S P R+ R F P+ RRR RL + PP PSTS Sbjct: 37 PLHRAAPPPAAVPHKSSPPSSAPPRRSPLRRRPRFAAVPTPRRRRPRLAASPPRRRPSTS 96 Query: 413 PEP 421 P Sbjct: 97 SRP 99
>Os02g0735500:Os02g0735500 | Length = 159 Score = 30.8 bits (68), Expect = 1.7 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 14/104 (13%) Frame = +2 Query: 167 RGPSPLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFV 346 R P +R RA L R+P P R A + P SP +A R + Sbjct: 63 RAPRSQSRPRAPSLARAPAWIPA-------RAASSAPSASPGPAAQPRRPLFSRARVPSG 115 Query: 347 QPSSSRRR--------------CRLSDPPCASPSTSPEPRFT*R 436 +P RRR L P +SPS+SP PR + R Sbjct: 116 RPPGRRRRHPLPRQPAPVARVVAPLQTAPPSSPSSSPGPRHSAR 159
>AK122118:Os01g0101600 | Length = 978 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = -1 Query: 346 DEEHSSSPCSKARNGCGRTRRNSRECSRTPERPLDASTRASQR*PSELASSNSSQRGGAS 167 D SSS +++R+ R +++SR SR+P+R + S S+ S S++ G S Sbjct: 593 DHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHREESLSPSK-------SRRSARAGSRS 645 Query: 166 MGNERGS 146 G +GS Sbjct: 646 PGQHKGS 652
>AK102536:Os09g0252100 | Length = 433 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/53 (28%), Positives = 28/53 (52%) Frame = +1 Query: 676 NIIRKLSGGAAAAMRRNLSRTNLELRQGCPTGEISLPEREIVVIVITNTPLIG 834 +++R + AAAA R + R+ L L G ++ R++ V+ + TP+ G Sbjct: 3 SLLRLVHSAAAAAARSSSFRSGLNLGLGAAMASDNIGSRDVCVVGVARTPMGG 55
>AK099952:Os01g0101600 | Length = 978 Score = 30.8 bits (68), Expect = 1.7 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = -1 Query: 346 DEEHSSSPCSKARNGCGRTRRNSRECSRTPERPLDASTRASQR*PSELASSNSSQRGGAS 167 D SSS +++R+ R +++SR SR+P+R + S S+ S S++ G S Sbjct: 593 DHYSSSSRRNRSRSISPRHKKSSRSDSRSPKRHREESLSPSK-------SRRSARAGSRS 645 Query: 166 MGNERGS 146 G +GS Sbjct: 646 PGQHKGS 652
>Os06g0587500:Os06g0587500 | Length = 1346 Score = 30.4 bits (67), Expect = 2.3 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = -3 Query: 179 GRGLDGERE-GIRRVRARISVGCNYRP-------RGRTWRPSMAMAAR*LPRFTPASC 30 GRGL GERE G R R + GC RP R P++A ++R P PA+C Sbjct: 1147 GRGLGGERENGQGRFELRPAGGCGRRPLQAPLSAAPRACSPAVAASSRARPSL-PAAC 1203
>AY594285:Os05g0170200 | Length = 194 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = -3 Query: 278 QGVLPHAGEAVGRVNKGESAVTE*ARELEFEPEGRGLDGEREGIRR 141 +GVL AGE G+S RE G DGERE +RR Sbjct: 99 EGVLGRAGEEADGGGAGDSPALARRREQRPRRRQEGSDGEREHVRR 144
>AK063611:Os05g0170200 | Length = 227 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/46 (39%), Positives = 21/46 (45%) Frame = -3 Query: 278 QGVLPHAGEAVGRVNKGESAVTE*ARELEFEPEGRGLDGEREGIRR 141 +GVL AGE G+S RE G DGERE +RR Sbjct: 132 EGVLGRAGEEADGGGAGDSPALARRREQRPRRRQEGSDGEREHVRR 177
>AK070363:Os01g0107900 | Length = 627 Score = 30.4 bits (67), Expect = 2.3 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = +2 Query: 272 LPGVSPRSSASIPSLRAGRGAMFFVQPSSSRRRCRLSDPPCASPSTSPEPRFT 430 +P SP S+A +PS A R A SS+ RC S ASPST R+T Sbjct: 19 IPLRSPPSAAHLPSAAASRRA------SSAACRCTASASASASPSTWDWTRWT 65
>AK059944:Os09g0287500 | Length = 196 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/51 (41%), Positives = 24/51 (47%) Frame = +2 Query: 251 PLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQPSSSRRRCRLSDPPCASP 403 PLRR GALP +PR++A LR G G R L P C SP Sbjct: 2 PLRRGGALPLSAPRAAAG--GLRGGGG-----------RGAALLHPTCLSP 39
>Os06g0101900:Os06g0101900 | Length = 249 Score = 29.6 bits (65), Expect = 3.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Frame = +2 Query: 176 SPLARIRARELTRSPL------TRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAM 337 +P A RA +R+PL RP P RA A+ + PR++AS RA Sbjct: 135 APAAAPRASPSSRAPLRRRRRVARPAVASPVPSPRAVAVARLEPRAAASPSHRRAP---- 190 Query: 338 FFVQPSSSRRRCRLSD----PPCASPSTSPEP 421 PS R ++ PP ASP SP P Sbjct: 191 ---SPSPMPRAVVVATSSPTPPVASPVLSPAP 219
>AK110099: | Length = 1152 Score = 29.6 bits (65), Expect = 3.9 Identities = 25/78 (32%), Positives = 33/78 (42%) Frame = +2 Query: 215 SPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQPSSSRRRCRLSDPPC 394 SPL +P V++PL RSS S P GR F + P R PP Sbjct: 881 SPLRQPHQEVEQPLEAG--------RSSDSTP----GRRRSFIISPVLFPTRGGEIPPPS 928 Query: 395 ASPSTSPEPRFT*RGRMR 448 +SP T+ P ++ MR Sbjct: 929 SSPYTAHTPTYSQVAAMR 946
>AK067772:Os02g0679500 | Length = 483 Score = 29.6 bits (65), Expect = 3.9 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = -2 Query: 423 RGSGDVLGEAQGGSERRQRRRDDDGWTKNIA----PRPALRLGMDADERGETPGSAPA 262 RG+G + +A GG RR+RR G ++++ R LG+ AD + P AP+ Sbjct: 88 RGAGVIAADAAGGEGRRRRRGVRRGDVRHVSHVTFDRFVGFLGLPADLEPDVPRPAPS 145
>AY224437:Os05g0223000 | Length = 189 Score = 29.3 bits (64), Expect = 5.1 Identities = 31/100 (31%), Positives = 37/100 (37%), Gaps = 10/100 (10%) Frame = -2 Query: 423 RGSGDVLGEAQGGSERRQRRR---DDDGWTKNIAPRPALR-------LGMDADERGETPG 274 RG G V +GG RR+RRR D DG A PA+R LG A R G Sbjct: 7 RGWGGVADAGEGGGRRRRRRRGAGDADGGAG--AGVPAVRRERRREDLGGGAGVRAAGTG 64 Query: 273 SAPAXXXXXXXXXXXRVSGDRVSSRARIRARGEGPRWGTR 154 AP + R+ R+R P G R Sbjct: 65 GAPRSRRGAAHDGRDGLRPRRLRRPLRVRRLPLRPHAGAR 104
>AK119387:Os07g0496300 | Length = 252 Score = 29.3 bits (64), Expect = 5.1 Identities = 33/89 (37%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +2 Query: 173 PSPLARIRA--RELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFV 346 PSP A A R+ ++P +R RP RR L G R+ L A R + Sbjct: 111 PSPAASSSAPSRDSAKNPRSR---LRTRPPRRRPRLRGARTRA------LGAWRRS---- 157 Query: 347 QPSSSRRRCRLSDPPCASPST---SPEPR 424 PSSS RR S+ P PST SP PR Sbjct: 158 -PSSSSRRPTRSESPTLPPSTTTRSPPPR 185
>AK102859:Os08g0528700 | Length = 187 Score = 29.3 bits (64), Expect = 5.1 Identities = 26/80 (32%), Positives = 30/80 (37%), Gaps = 1/80 (1%) Frame = +2 Query: 179 PLARIRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGAMFFVQPSS 358 PL A P P R P R + P SP S P + + P Sbjct: 11 PLCTPTAASTPPPPPGPPPPRHPSPWRTTSSTPAASPPPRRSKPPRTSPTSS-----PPP 65 Query: 359 SRRRCRLSDPPCASPS-TSP 415 SR RC S P ASP+ TSP Sbjct: 66 SRTRCSPSSPGSASPARTSP 85
>Os04g0577900:Os04g0577900 | Length = 102 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = -2 Query: 420 GSGDVLGEAQGGSERRQRRRDDDGWTKNIAPRPAL--RLGMDADERGETPGSAPA 262 GSGD G G SE RQRR D RPA+ + G RG + G +PA Sbjct: 15 GSGDGGGGVCGRSEGRQRREADP------RQRPAVKGKSGCGEKRRGGSGGGSPA 63
>AK109253: | Length = 196 Score = 28.9 bits (63), Expect = 6.6 Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Frame = +2 Query: 167 RGPSPLAR----IRARELTRSPLTRPC*RVQRPLRRAGALPGVSPRSSASIPSLRAGRGA 334 R P+P A IR+ SP + P + PG RS+A+ S+ R + Sbjct: 57 RSPTPKATPTRLIRSPTRCSSPTSPSSLNASSPSCLSSHAPGCLTRSTAA--SIAPTRSS 114 Query: 335 MFFVQPSSSRRRCRLSDPPCASPSTSPEPRFT*RGRMRTA 454 P SSR R RL CASPST P P R R A Sbjct: 115 A----PCSSRSR-RLR---CASPSTRPIPWTARRANARCA 146
>AK106479:Os11g0554200 | Length = 116 Score = 28.5 bits (62), Expect = 8.6 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 14/81 (17%) Frame = +3 Query: 594 ATSLGGLWAPYCPSGAHLLLYGGFRPRKYHKEAF--------GRSRRRHEAELEQ----- 734 A+++ W P PS LLL GG R + +A+ GR +R A ++ Sbjct: 19 ASTMAPRWPPPPPSSPSLLLSGGERRLRLALDAWVGDRGERGGRGNQRSGASPQEPLPTQ 78 Query: 735 -NQSRAPTGLSYRGNFPPGEG 794 S +P S RG P EG Sbjct: 79 WAASPSPPAKSERGTRSPAEG 99
>Os04g0468100:Os04g0468100 | Length = 390 Score = 28.5 bits (62), Expect = 8.6 Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 11/70 (15%) Frame = +2 Query: 260 RAGALPGVSPRSSASIPSLRAGRGAMFFVQPSSSRRRCRLSDP-----------PCASPS 406 RA A P PR + + RA RG +P RRR RL P P +SPS Sbjct: 114 RARAAPLHLPR--IPLQAARACRGG----RPPGRRRRQRLPAPVARAAAPLHTAPPSSPS 167 Query: 407 TSPEPRFT*R 436 +SP PR + R Sbjct: 168 SSPRPRHSAR 177
>AK119363:Os01g0809000 | Length = 176 Score = 28.5 bits (62), Expect = 8.6 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 219 GDRVSSRARIRARGEGPRWGTRGDQ 145 GD +S++ R R RG RW +RG Q Sbjct: 64 GDELSAQPRRRPRGGSRRWSSRGRQ 88
>AK102958:Os11g0149100 | Length = 366 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +1 Query: 529 RIILGFMKNSGWKKYQR--GATRRPQAWVACGPPIAPPALIFCYM 657 ++I+G + K++QR G ++P A A PP+APP ++ M Sbjct: 245 QVIVGSFLPNSLKQHQRRMGLQQQPSAAPALPPPMAPPPVLTAAM 289 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 33,734,048 Number of extensions: 857753 Number of successful extensions: 3435 Number of sequences better than 10.0: 27 Number of HSP's gapped: 3419 Number of HSP's successfully gapped: 27 Length of query: 361 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 259 Effective length of database: 11,315,673 Effective search space: 2930759307 Effective search space used: 2930759307 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
