ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf34p02 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g23280:12012.t02060:unspliced-genomic GMFP5, putative, expressed| Length = 1679 Score = 70.3 bits (147), Expect(5) = 1e-29 Identities = 30/31 (96%), Positives = 31/31 (100%) Frame = +3 / +2 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 GIDAISMDMASRKMTV+GTVDPVDVVSKLRK Sbjct: 659 GIDAISMDMASRKMTVIGTVDPVDVVSKLRK 751 Score = 54.7 bits (113), Expect(5) = 1e-29 Identities = 22/27 (81%), Positives = 26/27 (96%) Frame = +3 / +2 Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVG 260 +KIVVKL+LHDNKDKQKAMKAVS ++G Sbjct: 455 QKIVVKLDLHDNKDKQKAMKAVSSVIG 535 Score = 39.6 bits (80), Expect(5) = 1e-29 Identities = 15/15 (100%), Positives = 15/15 (100%) Frame = +3 / +2 Query: 774 NMSMEENPNSCAIC* 818 NMSMEENPNSCAIC* Sbjct: 1250 NMSMEENPNSCAIC* 1294 Score = 25.4 bits (49), Expect(5) = 1e-29 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +2 / +3 Query: 929 ETNKVCKMKL 958 ETNKVCK+KL Sbjct: 1593 ETNKVCKIKL 1622 Score = 23.1 bits (44), Expect(5) = 1e-29 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +3 / +2 Query: 345 RKGWAAYIESV 377 + WAAYIESV Sbjct: 749 KASWAAYIESV 781 Score = 34.1 bits (68), Expect(4) = 8e-09 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -3 / -3 Query: 262 MPTSTETAFMAFCXXXXXXXXSFTTIF 182 +P + ETAFMAFC SFTTIF Sbjct: 537 VPITEETAFMAFCLSLLSCRSSFTTIF 457 Score = 33.1 bits (66), Expect(4) = 8e-09 Identities = 13/15 (86%), Positives = 13/15 (86%) Frame = -3 / -3 Query: 814 QMAHEFGFSSMLMFR 770 QMAHE GFSSMLM R Sbjct: 1290 QMAHELGFSSMLMLR 1246 Score = 28.1 bits (55), Expect(4) = 8e-09 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -3 / -3 Query: 298 ILRDAMSMEMASMP 257 I RDAMS+EMAS+P Sbjct: 699 IFRDAMSIEMASIP 658 Score = 26.7 bits (52), Expect(4) = 8e-09 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 / -3 Query: 1001 ISAIVESSRLLASCTVSSCKLCWS 930 +++ VE + + V SCKLCWS Sbjct: 1665 LNSFVEKTVNILCILV*SCKLCWS 1594 Score = 38.2 bits (77), Expect(2) = 0.068 Identities = 13/15 (86%), Positives = 15/15 (100%) Frame = +2 / +1 Query: 773 EHEHGGEPKLVRHLL 817 +HEHGGEP+LVRHLL Sbjct: 1249 QHEHGGEPQLVRHLL 1293 Score = 22.1 bits (42), Expect(2) = 0.068 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +1 / +2 Query: 931 DQQSLQDET 957 DQQSLQD+T Sbjct: 1595 DQQSLQDQT 1621
>LOC_Os03g03500:12003.t00232:unspliced-genomic GMFP5, putative, expressed| Length = 1907 Score = 70.7 bits (148), Expect(3) = 7e-25 Identities = 30/36 (83%), Positives = 35/36 (97%) Frame = +3 / +2 Query: 243 VSVLVGIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 +S++ GIDAISMDMASRKMTV+GTVDPV+VVSKLRK Sbjct: 554 MSLMSGIDAISMDMASRKMTVIGTVDPVNVVSKLRK 661 Score = 53.8 bits (111), Expect(3) = 7e-25 Identities = 22/27 (81%), Positives = 24/27 (88%) Frame = +3 / +2 Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVG 260 +KIVVKL+LHDNKDKQKAMK VS L G Sbjct: 395 QKIVVKLDLHDNKDKQKAMKVVSTLAG 475 Score = 35.0 bits (70), Expect(3) = 7e-25 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +3 / +2 Query: 774 NMSMEENPNSCAIC* 818 +MSMEENPN CAIC* Sbjct: 1028 DMSMEENPNPCAIC* 1072 Score = 34.5 bits (69), Expect(3) = 1e-06 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -3 / -3 Query: 262 MPTSTETAFMAFCXXXXXXXXSFTTIF 182 +P S ET FMAFC SFTTIF Sbjct: 477 VPASVETTFMAFCLSLLSWRSSFTTIF 397 Score = 34.1 bits (68), Expect(3) = 1e-06 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -3 / -3 Query: 298 ILRDAMSMEMASMPTSTE 245 ILRDAMSMEMASMP ++ Sbjct: 609 ILRDAMSMEMASMPDMSD 556 Score = 28.1 bits (55), Expect(3) = 1e-06 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -3 / -3 Query: 844 RTHARATPI*QMAHEFGFSSMLM 776 R +AR QMAH GFSSMLM Sbjct: 1098 RCNARIPFDQQMAHGLGFSSMLM 1030 Score = 34.5 bits (69), Expect = 1.3 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = +2 / +1 Query: 776 HEHGGEPKLVRHLLNRSRACVRAS*PLLANVP 871 HEHGGEP+ V HLL +C+ + LA+ P Sbjct: 1030 HEHGGEPQPVCHLLIEWYSCIASDL*QLASSP 1125
>LOC_Os10g38870:12010.t03126:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1438 Score = 75.8 bits (159), Expect(3) = 1e-24 Identities = 32/40 (80%), Positives = 36/40 (90%) Frame = +3 / +2 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRKGWAAYIESV 377 GID +SMDMAS+KMTV+G VDPV+VVSKLRK WAA IESV Sbjct: 626 GIDELSMDMASQKMTVIGMVDPVNVVSKLRKSWAATIESV 745 Score = 47.3 bits (97), Expect(3) = 1e-24 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = +3 / +3 Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVG 260 +KIVVKL +HD +KQKAMKAVS L+G Sbjct: 414 QKIVVKLNVHDKAEKQKAMKAVSALIG 494 Score = 34.5 bits (69), Expect(3) = 1e-24 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +3 / +2 Query: 780 SMEENPNSCAIC* 818 SMEENPNSCAIC* Sbjct: 1043 SMEENPNSCAIC* 1081 Score = 44.1 bits (90), Expect(2) = 1e-04 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = -3 / -1 Query: 298 ILRDAMSMEMASMPTSTETAFMAFCXXXXXXXXSFTTIFLAAM 170 I R++ + + S+P S ETAFMAFC SFTTIF + M Sbjct: 532 IKRNSFNSVLVSLPMSAETAFMAFCFSALSCTFSFTTIFCSKM 404 Score = 25.8 bits (50), Expect(2) = 1e-04 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 / -2 Query: 841 THARATPI*QMAHEFGFSSML 779 +H + QMA E GFSSML Sbjct: 1104 SHGGIDRVQQMAQELGFSSML 1042 Score = 33.1 bits (66), Expect = 3.4 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +2 / +1 Query: 779 EHGGEPKLVRHLLN 820 EHGG+P+L+RHLLN Sbjct: 1042 EHGGKPQLLRHLLN 1083
>LOC_Os04g57200:12004.t05186:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1324 Score = 64.8 bits (135), Expect(3) = 7e-21 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +3 / +2 Query: 249 VLVGIDAISMDMASRKMTVLGTVDPVDVVSKLRKGW 356 V GID ISMDM +K+TV+G VDPVDVV KLRKGW Sbjct: 605 VTAGIDMISMDMKGQKLTVVGDVDPVDVVGKLRKGW 712 Score = 52.4 bits (108), Expect(3) = 7e-21 Identities = 22/32 (68%), Positives = 29/32 (90%) Frame = +3 / +2 Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVGIDAIS 275 +K+V+KL+LHD+KDKQKA+KAVS L GI +IS Sbjct: 356 QKLVLKLDLHDDKDKQKAIKAVSTLHGIYSIS 451 Score = 27.6 bits (54), Expect(3) = 7e-21 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 / +2 Query: 780 SMEENPNSCAIC* 818 S EE+PNSC IC* Sbjct: 902 SAEEDPNSCVIC* 940
>LOC_Os03g02070:12003.t00099:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1367 Score = 43.2 bits (88), Expect = 0.003 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +3 / +3 Query: 252 LVGIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 + GID+I+ D+ KMT++G +D V++ KLRK Sbjct: 921 VAGIDSIAADLKDNKMTIIGDMDTVEIAKKLRK 1019
>LOC_Os04g45130:12004.t04048:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1064 Score = 41.8 bits (85), Expect = 0.008 Identities = 16/31 (51%), Positives = 23/31 (74%) Frame = +3 / +3 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 GID+I+ D +KMTV+G VD V++ KL+K Sbjct: 708 GIDSIAADHKDQKMTVIGEVDTVEIAKKLKK 800
>LOC_Os10g36200:12010.t02905:unspliced-genomic metal ion binding protein, putative, expressed| Length = 1097 Score = 39.6 bits (80), Expect = 0.040 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +3 / +2 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 GID+I+ D+ KMT++G +D V + KL+K Sbjct: 695 GIDSIAADLKDNKMTIIGEMDTVAIAKKLKK 787
>LOC_Os03g64340:12003.t05644:unspliced-genomic copper ion binding protein, putative, expressed| Length = 1403 Score = 37.7 bits (76), Expect = 0.14 Identities = 14/54 (25%), Positives = 30/54 (55%) Frame = +3 / +1 Query: 186 IVVKLELHDNKDKQKAMKAVSVLVGIDAISMDMASRKMTVLGTVDPVDVVSKLR 347 +++ +ELH ++ + + G+ + +DM ++TV G VDP + ++LR Sbjct: 274 VILGVELHCTGCARRMRRCILRSKGVQGVEVDMGGNQLTVTGIVDPQALCARLR 435
>LOC_Os04g56570:12004.t05127:unspliced-genomic heavy metal-associated domain containing protein, expressed| Length = 719 Score = 36.3 bits (73), Expect = 0.37 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 / +3 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 G+D I +D MTV DPVDV+ + RK Sbjct: 336 GVDKIDIDSEKGTMTVTARADPVDVIERTRK 428
>LOC_Os01g14710:12001.t01327:unspliced-genomic conserved hypothetical protein| Length = 939 Score = 36.3 bits (73), Expect = 0.37 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +3 / +1 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 GI ++ +D +TV+G VDPV +V KLRK Sbjct: 490 GIKSMDIDAEKCTLTVVGIVDPVRIVRKLRK 582
>LOC_Os08g43250:12008.t04050:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed| Length = 1770 Score = 33.1 bits (66), Expect(2) = 0.43 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -1 / -3 Query: 924 KRSRKYYTQRQRHARSPRGTLASKGQDARTHARLRFSRWR 805 +R R+ + R R+PRGT S G R AR R SR R Sbjct: 934 RRRRRRHESDLRSRRTPRGTARS*GWSRRRRARRRGSRGR 815 Score = 24.4 bits (47), Expect(2) = 0.43 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = -1 / -3 Query: 108 KRGQVRIMGVAS*RVRACGKLGTAGERVTQQRRQ 7 +RG R A R R CG+ T G RR+ Sbjct: 565 RRGAARPFAGARRRARTCGRRRTPGRTRGPSRRR 464
>LOC_Os07g34370:12007.t03113:unspliced-genomic conserved hypothetical protein| Length = 3453 Score = 35.4 bits (71), Expect = 0.69 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -2 / -3 Query: 176 RHGSDPAWDGCSQRWRRRSEDGSN 105 R GS P W+ S RWRR DG N Sbjct: 2785 RRGSRPRWEASSGRWRRHVPDGWN 2714
>LOC_Os02g56770:12002.t05249:unspliced-genomic F-box domain containing protein, expressed| Length = 445 Score = 29.0 bits (57), Expect(2) = 0.85 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 / -1 Query: 176 RHGSDPAWDGCSQRWRRRSEDGSN 105 R GS P+W+ ++R RR G+N Sbjct: 229 RRGSAPSWNAAAERAHRRRAAGTN 158 Score = 23.5 bits (45), Expect(2) = 0.85 Identities = 10/36 (27%), Positives = 16/36 (44%) Frame = -3 / -3 Query: 121 RKMDQTGTGENNGSS*LASEGVWETGHGRRACHATA 14 RK +T + +W T GRR+ HA++ Sbjct: 110 RKAGETAAARHASRGVSRGITLWRTSCGRRSIHASS 3
>LOC_Os07g43650:12007.t04010:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 3094 Score = 35.0 bits (70), Expect = 0.95 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 / -2 Query: 158 AWDGCSQRWRRRSEDGSNG 102 AW CS+RWRRR+ G +G Sbjct: 2598 AWGRCSRRWRRRAAQGGSG 2542
>LOC_Os01g14700:12001.t01326:unspliced-genomic conserved hypothetical protein| Length = 703 Score = 35.0 bits (70), Expect = 0.95 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 / +2 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 GI ++ +D +TVLG VDPV +V +L+K Sbjct: 326 GIKSMDIDEEKCTLTVLGPVDPVKIVHRLKK 418
>LOC_Os03g51240:12003.t04454:unspliced-genomic glucan endo-1,3-beta-glucosidase 7 precursor, putative, expressed| Length = 3074 Score = 35.0 bits (70), Expect = 0.95 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 / -3 Query: 787 RRTQTRAPSAKSESRVRACVLTLARQRSAG*PCMP 891 RRT+ R+P + R R C T +R+R + PC P Sbjct: 2520 RRTRARSPRWRRPRRPRRCAATRSRRRRSPRPCTP 2416
>LOC_Os06g45040:12006.t04191:unspliced-genomic B-box zinc finger family protein| Length = 1657 Score = 29.9 bits (59), Expect(2) = 0.98 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -2 / +2 Query: 935 WSRKNDRGNTIHRGRGMHGHPAERWRAR 852 W R+ RG GRG PA RW +R Sbjct: 254 WRRRRRRGGGGGGGRGQRRGPARRWFSR 337 Score = 26.3 bits (51), Expect(2) = 0.98 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -2 / +2 Query: 149 GCSQRWRRR 123 GCS+RWRRR Sbjct: 572 GCSRRWRRR 598
>LOC_Os02g37280:12002.t03366:unspliced-genomic metal ion binding protein, putative| Length = 580 Score = 34.1 bits (68), Expect = 1.8 Identities = 12/39 (30%), Positives = 25/39 (64%) Frame = +3 / +2 Query: 162 IGAMAAKKIVVKLELHDNKDKQKAMKAVSVLVGIDAISM 278 +G +KIV+K+ + +K + KAM V+ G+D++++ Sbjct: 212 LGWFLQQKIVIKMNMASDKCRSKAMALVASTTGVDSVAL 328
>LOC_Os09g22150:12009.t01949:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3133 Score = 28.6 bits (56), Expect(3) = 2.8 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -3 / +1 Query: 949 LANFVGLVKTIEEILYTEAEAC 884 L N+ L KT++E+LY EA+ C Sbjct: 430 LDNWEVLKKTVKELLYDEAKGC 495 Score = 23.5 bits (45), Expect(3) = 2.8 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -2 / +3 Query: 866 RWRARVKTHARTRDSDLADGAR 801 RWRA+ + +T ++DLA R Sbjct: 1497 RWRAKDRLFDKTVENDLAPETR 1562 Score = 22.6 bits (43), Expect(3) = 2.8 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -2 / +1 Query: 146 CSQRWRRRSEDGSNG 102 CS R RRR G NG Sbjct: 1606 CSGRERRRPSGGRNG 1650
>LOC_Os12g16190:12012.t01472:unspliced-genomic hypothetical protein| Length = 1218 Score = 33.1 bits (66), Expect = 3.4 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -2 / -2 Query: 959 TVSSCKLCWSRKNDRGNTIHRGRGMHGHPA 870 TV C C + DR HRGRG HPA Sbjct: 431 TVRPCLHCCAATPDRARGPHRGRGRIAHPA 342
>LOC_Os05g23880:12005.t02045:unspliced-genomic lipoxygenase A, putative, expressed| Length = 6014 Score = 33.1 bits (66), Expect = 3.4 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 / -2 Query: 938 CWSRKNDRGNTIHRGRGMHGHPAERWRARVKTHA 837 C S + G+ HRGRG HGH + R R + + Sbjct: 1711 CGSGEGRGGSWCHRGRGGHGHRCQGCRGRYSSRS 1610
>LOC_Os02g37300:12002.t03368:unspliced-genomic ATFP4, putative, expressed| Length = 953 Score = 33.1 bits (66), Expect = 3.4 Identities = 12/33 (36%), Positives = 24/33 (72%) Frame = +3 / +1 Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVGIDAISM 278 +KIV+K+E+ +K + KAM V+ G+D++++ Sbjct: 286 QKIVIKVEMSCDKCRSKAMALVAATGGVDSVAL 384
>LOC_Os03g25610:12003.t02259:unspliced-genomic heavy metal-associated domain containing protein, expressed| Length = 608 Score = 32.7 bits (65), Expect = 4.6 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +3 / +3 Query: 258 GIDAISMDMASRKMTVLGTVDPVDVVSKLRK 350 G+ +++ D MTV+G VD V VV +LRK Sbjct: 279 GVKSLAADDEKGTMTVVGEVDVVQVVGELRK 371
>LOC_Os02g37290:12002.t03367:unspliced-genomic metal ion binding protein, putative, expressed| Length = 797 Score = 32.7 bits (65), Expect = 4.6 Identities = 12/39 (30%), Positives = 25/39 (64%) Frame = +3 / +3 Query: 162 IGAMAAKKIVVKLELHDNKDKQKAMKAVSVLVGIDAISM 278 +G +KIV+K+ + +K + KAM V+ G+D++++ Sbjct: 246 LGWFLQQKIVIKVNMASDKCRSKAMALVASTSGVDSVAL 362
>LOC_Os10g05690:12010.t00444:unspliced-genomic auxin transporter-like protein 3, putative, expressed| Length = 6214 Score = 32.7 bits (65), Expect = 4.7 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -1 / +3 Query: 924 KRSRKYYTQRQRHARSPRGTLASKGQDARTHARLRFSRWR 805 KRSR+ + +R+R R RG + G+ + R +RWR Sbjct: 234 KRSRRRWGRRRRRGRGCRGCCGTGGRRTTRGSAARRTRWR 353
>LOC_Os08g40520:12008.t03782:unspliced-genomic expressed protein| Length = 2759 Score = 25.8 bits (50), Expect(2) = 5.9 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -2 / +2 Query: 896 GRGMHGHPAERWRARVKTHAR 834 GRG G A +WR R K R Sbjct: 1607 GRGREGSEARKWRRRGKREDR 1669 Score = 23.5 bits (45), Expect(2) = 5.9 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -2 / +2 Query: 965 SCTVSSCKLC 936 SCT +SCK+C Sbjct: 1487 SCTRASCKIC 1516
>LOC_Os10g35880:12010.t02877:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6078 Score = 32.2 bits (64), Expect = 6.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 / +2 Query: 1001 ISAIVESSRLLASCTVSSCKLCW 933 + +VE + L CT+ C+LCW Sbjct: 5780 LKKVVEDQQTLVGCTMQLCQLCW 5848
>LOC_Os06g23504:12006.t02161:unspliced-genomic DTW domain containing protein, expressed| Length = 17991 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -3 / +3 Query: 103 GTGENNGSS*LASEGVWETGHGRRACHATAAAGH 2 G+G+ +S + G W+ G GRR A A GH Sbjct: 15546 GSGDGVHASAVGVRGAWQWGGGRREAGAPCAPGH 15647
>LOC_Os02g22060:12002.t01994:unspliced-genomic membrane protein, putative, expressed| Length = 7120 Score = 32.2 bits (64), Expect = 6.4 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 / -2 Query: 971 VVYCSLL*HLCTYICIF*NCDATYCLKKKK 1060 VV +L+ LC+Y C F C Y LKK++ Sbjct: 6066 VVTAALICSLCSYTCKFSLCQIRYALKKQR 5977
>LOC_Os01g38510:12001.t03387:unspliced-genomic protein transport protein Sec61 beta subunit, putative, expressed| Length = 1947 Score = 32.2 bits (64), Expect = 6.4 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -2 / +1 Query: 185 LLGRHGSDPAWDGCSQRWRRRSEDGS 108 + GR P+WDG + WRR G+ Sbjct: 22 IFGREDE*PSWDGSTSDWRRADSSGA 99
>LOC_Os01g14200:12001.t01278:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 10878 Score = 32.2 bits (64), Expect = 6.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -2 / +2 Query: 1001 ISAIVESSRLLASCTVSSCKLCW 933 + +VE + L CT+ C+LCW Sbjct: 10580 LKKVVEDQQTLVGCTMQLCQLCW 10648
>LOC_Os03g48920:12003.t04242:unspliced-genomic membrane protein, putative, expressed| Length = 3704 Score = 32.2 bits (64), Expect = 6.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 / +2 Query: 921 RSRKYYTQRQRHARSPRGTLASKGQDARTHARLRFSRWR 805 RSR + R R +RSPR +S G+ +R RWR Sbjct: 257 RSRGPSSTRSRRSRSPRWRCSSPGRCSRQRGHTTAPRWR 373
>LOC_Os11g22280:12011.t01898:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 963 Score = 24.9 bits (48), Expect(2) = 8.7 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -2 / -3 Query: 149 GCSQRWRRRSEDGS 108 GCS RWR R+ GS Sbjct: 502 GCSSRWRGRA*RGS 461 Score = 24.0 bits (46), Expect(2) = 8.7 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 / -3 Query: 36 GERVTQQRRQD 4 G RV QQRRQD Sbjct: 331 GRRVVQQRRQD 299
>LOC_Os08g36390:12008.t03379:unspliced-genomic zinc finger, C2H2 type family protein, expressed| Length = 3285 Score = 31.8 bits (63), Expect = 8.8 Identities = 16/47 (34%), Positives = 17/47 (36%) Frame = -2 / +2 Query: 953 SSCKLCWSRKNDRGNTIHRGRGMHGHPAERWRARVKTHARTRDSDLA 813 SSC W R+ R R G P WR R R R S A Sbjct: 2630 SSCVWRWPRRRPRTRRARRRSGRRSSPTRSWRPRGGCGTRRRWSSAA 2770
>LOC_Os04g28520:12004.t02548:unspliced-genomic fatty acyl coA reductase, putative, expressed| Length = 9326 Score = 31.8 bits (63), Expect = 8.8 Identities = 10/45 (22%), Positives = 24/45 (53%) Frame = +2 / -2 Query: 887 CLCLCV*YFLDRFYETNKVCKMKLYN*LVVYCSLL*HLCTYICIF 1021 C+C+C+ ++ + M +Y + +Y + ++C Y+CI+ Sbjct: 4570 CMCMCMYMYMYVYMYMYMYMYMYMYMYMYMYMYMYMYICMYMCIY 4436
>LOC_Os04g14760:12004.t01294:unspliced-genomic phosphoglycerate mutase family protein, expressed| Length = 4989 Score = 31.8 bits (63), Expect = 8.8 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 / +2 Query: 914 LDRFYETNKVCKMKLYN*LVVYCSLL*H 997 LD F N C ++ YN*L++YC H Sbjct: 743 LDSFIYDNHECVVRFYN*LLIYCPTCVH 826
>LOC_Os04g03740:12004.t00263:unspliced-genomic expressed protein| Length = 1274 Score = 31.8 bits (63), Expect = 8.8 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 / -1 Query: 173 HGSDPAWDGCSQRWRRRSEDGSNGDR 96 H P+ CS++WRRRSE G R Sbjct: 938 HPLSPSSPSCSEQWRRRSEIGGERRR 861
>LOC_Os03g40030:12003.t03435:unspliced-genomic conserved hypothetical protein| Length = 531 Score = 31.8 bits (63), Expect = 8.8 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = -2 / +1 Query: 179 GRHGSDPAWDGCSQRWRRRSEDGSNGDR*E 90 GRHG G SQRWRRR G R E Sbjct: 169 GRHGGTGNDAGTSQRWRRRRWQQGTGRRGE 258
>LOC_Os03g12570:12003.t01056:unspliced-genomic DNA cytosine methyltransferase MET2a, putative, expressed| Length = 11118 Score = 31.3 bits (62), Expect(2) = 9.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 / +3 Query: 903 TQRQRHARSPRGTLASKGQDARTHARLRFSRWRTS 799 T R+R RSPRG ++ G ++HA + WR S Sbjct: 612 TWRRRRRRSPRGPSSTVGCRPQSHAASGSAGWRRS 716 Score = 24.0 bits (46), Expect(2) = 9.1 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = -3 / +1 Query: 67 SEGVWETGHGRRACHATAAAGH 2 + G HG R H AAGH Sbjct: 8764 ARGCHHRRHGHRVLHLRPAAGH 8829 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 215,091,030 Number of extensions: 3093499 Number of successful extensions: 19375 Number of sequences better than 10.0: 39 Length of query: 354 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 304 Effective length of database: 52,799,986 Effective search space: 16051195744 Effective search space used: 16051195744 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
