ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34p02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6L406:R1B19_SOLDE Putative late blight resistance protein homol... 40 0.021
2Q6L440:R1A3_SOLDE Putative late blight resistance protein homolo... 40 0.021
3Q9W6S3:SIN1_CHICK Stress-activated map kinase-interacting protei... 32 3.4

>Q6L406:R1B19_SOLDE Putative late blight resistance protein homolog R1B-19 - Solanum|
            demissum (Wild potato)
          Length = 1326
 Score = 39.7 bits (91), Expect = 0.021
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 180  KKIVVKLELHDNKDKQKAMKAVSVLVGIDAISMDMASRKMTVLGTVDPVDVVS--KLRKG 353
            +K  +KL L  ++D  KA K + +  GI+++S D   +K+TV G VD    +S  +  K 
Sbjct: 1210 EKKTLKLNLSHDEDIPKAFKRLFLCPGIESVSTDRKEKKLTVTGDVDAGSSISCGETEKA 1269

Query: 354  WAAYI 368
            W A +
Sbjct: 1270 WHARV 1274



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>Q6L440:R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 - Solanum|
           demissum (Wild potato)
          Length = 775

 Score = 39.7 bits (91), Expect = 0.021
 Identities = 17/51 (33%), Positives = 35/51 (68%)
 Frame = +3

Query: 180 KKIVVKLELHDNKDKQKAMKAVSVLVGIDAISMDMASRKMTVLGTVDPVDV 332
           KK++++ ++  +K+   A K ++ L G+D+IS+DM  +K+TV G ++  +V
Sbjct: 712 KKMILQFDISHDKEIDNAFKRLASLPGVDSISIDMIEKKLTVGGDMNANEV 762



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>Q9W6S3:SIN1_CHICK Stress-activated map kinase-interacting protein 1 - Gallus gallus|
           (Chicken)
          Length = 522

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 156 GRIGAMAAKKIVVKLELHDNKDKQKAMKAVSV 251
           G +G  A KKI V L LH N+DK + M  V++
Sbjct: 167 GHVGTTATKKIDVYLPLHANQDKLQPMTVVTI 198


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 93,027,378
Number of extensions: 1661648
Number of successful extensions: 4122
Number of sequences better than 10.0: 3
Number of HSP's gapped: 4122
Number of HSP's successfully gapped: 3
Length of query: 354
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 240
Effective length of database: 69,416,809
Effective search space: 16660034160
Effective search space used: 16660034160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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