ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34p02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001055362.1| Oryza sativa (japonica cultivar-group) Os03g... 293 7e-76
2dbj|AK099929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 7e-76
3emb|CT833611.1| Oryza sativa (indica cultivar-group) cDNA clone:... 254 6e-64
4ref|NM_001073192.1| Oryza sativa (japonica cultivar-group) Os12g... 246 1e-61
5dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 1e-61
6gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome... 194 5e-46
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 194 5e-46
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 165 4e-37
9emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 165 4e-37
10emb|CT832600.1| Oryza sativa (indica cultivar-group) cDNA clone:... 157 1e-34
11ref|NM_001071683.1| Oryza sativa (japonica cultivar-group) Os10g... 157 1e-34
12dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 1e-34
13gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno... 107 8e-20
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 107 8e-20
15gb|AY105811.1| Zea mays PCO068837 mRNA sequence 105 3e-19
16gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome 46 0.26
17ref|XM_502533.1| Yarrowia lipolytica CLIB122, YALI0D07480g predi... 46 0.26
18emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 46 0.26
19gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 44 1.0
20emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone... 44 1.0
21gb|U84501.1|CBU84501 Caenorhabditis briggsae cuticle collagen (C... 44 1.0
22gb|AC190174.3| Pan troglodytes BAC clone CH251-539J21 from chrom... 42 4.0
23emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromo... 42 4.0
24emb|CT829363.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 4.0
25emb|CT829362.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 4.0
26gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome... 42 4.0
27gb|AC146040.2| Pan troglodytes BAC clone RP43-97N16 from 7, comp... 42 4.0
28gb|AC007036.3| Homo sapiens BAC clone RP11-112E16 from 7, comple... 42 4.0
29ref|NM_061808.1| Caenorhabditis elegans C33C12.9 (C33C12.9) mRNA... 42 4.0
30gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Ca... 42 4.0
31dbj|AB220607.1| Uncultured bacterium phaC gene for PHA synthase,... 42 4.0
32gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 42 4.0
33emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on ch... 42 4.0
34gb|AF016662.1| Caenorhabditis elegans cosmid C33C12, complete se... 42 4.0
35gb|AC123621.10| Mus musculus chromosome 19, clone RP23-74D13, co... 42 4.0
36gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538... 42 4.0
37gb|AF018955.1|AF018955 Ectothiorhodospira shaposhnikovii chlorin... 42 4.0 
>ref|NM_001055362.1| Oryza sativa (japonica cultivar-group) Os03g0126700 (Os03g0126700)
           mRNA, complete cds
          Length = 966
 Score =  293 bits (148), Expect = 7e-76
 Identities = 201/218 (92%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 aagaagattgtggtgaagctggatctccatgacaacaaggacaagcagaaggccatgaag 264

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           | |||||||  ||| | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 gtcgtctccacgcttgccggcatcgacgccatttccatggacatggcgtcgcgcaagatg 324

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagg---gctgg 356
           |||||| |||||||||| ||||||||| ||||||||||||||||||||||||    ||||
Sbjct: 325 acggtgatcggcacggttgacccggtgaacgtggtgagcaagctgcgcaaggcgtcctgg 384

                                                 
Query: 357 gcggcctacatcgagtccgtcggcccggccaaggagcc 394
            ||||||||||||||||| |||||||||||||||||||
Sbjct: 385 ccggcctacatcgagtccctcggcccggccaaggagcc 422



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           ||||||||| | || |||||||||||||||||||||| ||| |||| ||||| ||||
Sbjct: 728 actactacgcgagggacatgagcatggaggagaaccccaacccgtgtgccatttgct 784
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>dbj|AK099929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118L13, full
           insert sequence
          Length = 965

 Score =  293 bits (148), Expect = 7e-76
 Identities = 201/218 (92%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 206 aagaagattgtggtgaagctggatctccatgacaacaaggacaagcagaaggccatgaag 265

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           | |||||||  ||| | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 266 gtcgtctccacgcttgccggcatcgacgccatttccatggacatggcgtcgcgcaagatg 325

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagg---gctgg 356
           |||||| |||||||||| ||||||||| ||||||||||||||||||||||||    ||||
Sbjct: 326 acggtgatcggcacggttgacccggtgaacgtggtgagcaagctgcgcaaggcgtcctgg 385

                                                 
Query: 357 gcggcctacatcgagtccgtcggcccggccaaggagcc 394
            ||||||||||||||||| |||||||||||||||||||
Sbjct: 386 ccggcctacatcgagtccctcggcccggccaaggagcc 423



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           ||||||||| | || |||||||||||||||||||||| ||| |||| ||||| ||||
Sbjct: 729 actactacgcgagggacatgagcatggaggagaaccccaacccgtgtgccatttgct 785
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>emb|CT833611.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA018I18, full
           insert sequence
          Length = 718

 Score =  254 bits (128), Expect = 6e-64
 Identities = 196/218 (89%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 157 aagaaaattgtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaag 216

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||||  | | ||||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct: 217 gccgtctcctcggttgtcggaatcgacgccatttcgatggacatggcgtcgcgtaagatg 276

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagg---gctgg 356
           |||||| ||||||||||||| ||||||||||||||||||||||| |||||||     |||
Sbjct: 277 acggtgatcggcacggtggatccggtggacgtggtgagcaagctccgcaaggcgtcgtgg 336

                                                 
Query: 357 gcggcctacatcgagtccgtcggcccggccaaggagcc 394
           ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 337 gcggcctacatcgagtcggtcggaccggccaaggagcc 374



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 657 actactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgct 713
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>ref|NM_001073192.1| Oryza sativa (japonica cultivar-group) Os12g0421000 (Os12g0421000)
           mRNA, complete cds
          Length = 1287

 Score =  246 bits (124), Expect = 1e-61
 Identities = 195/218 (89%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 267 aagaaaattgtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaag 326

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||||  | |  |||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct: 327 gccgtctcctcggttatcggaatcgacgccatttcgatggacatggcgtcgcggaagatg 386

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagg---gctgg 356
           |||||| ||||||||||||| ||||||||||||||||||||||| |||||||     |||
Sbjct: 387 acggtgatcggcacggtggatccggtggacgtggtgagcaagctccgcaaggcgtcgtgg 446

                                                 
Query: 357 gcggcctacatcgagtccgtcggcccggccaaggagcc 394
           ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 447 gcggcctacatcgagtcggtcggaccggccaaggagcc 484



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 922 actactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgct 978
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>dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098J19, full
           insert sequence
          Length = 1289

 Score =  246 bits (124), Expect = 1e-61
 Identities = 195/218 (89%), Gaps = 3/218 (1%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| || |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 268 aagaaaattgtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaag 327

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||||  | |  |||| ||||||||||| || ||||||||||||||||| ||||||
Sbjct: 328 gccgtctcctcggttatcggaatcgacgccatttcgatggacatggcgtcgcggaagatg 387

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagg---gctgg 356
           |||||| ||||||||||||| ||||||||||||||||||||||| |||||||     |||
Sbjct: 388 acggtgatcggcacggtggatccggtggacgtggtgagcaagctccgcaaggcgtcgtgg 447

                                                 
Query: 357 gcggcctacatcgagtccgtcggcccggccaaggagcc 394
           ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 448 gcggcctacatcgagtcggtcggaccggccaaggagcc 485



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 923 actactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgct 979
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>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
             complete sequence
          Length = 117612

 Score =  194 bits (98), Expect = 5e-46
 Identities = 130/140 (92%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                         
Query: 258   ggcatcgacgccatctccatggacatggcgtcgcgcaagatgacggtgctcggcacggtg 317
             |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 28747 ggcatcgacgccatttccatggacatggcgtcgcgcaagatgacggtgatcggcacggtt 28806

                                                                         
Query: 318   gacccggtggacgtggtgagcaagctgcgcaagg---gctgggcggcctacatcgagtcc 374
             ||||||||| ||||||||||||||||||||||||    |||| |||||||||||||||||
Sbjct: 28807 gacccggtgaacgtggtgagcaagctgcgcaaggcgtcctggccggcctacatcgagtcc 28866

                                 
Query: 375   gtcggcccggccaaggagcc 394
              |||||||||||||||||||
Sbjct: 28867 ctcggcccggccaaggagcc 28886



 Score =  111 bits (56), Expect = 5e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                         
Query: 181   agaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaagg 240
             ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 28574 agaagattgtggtgaagctggatctccatgacaacaaggacaagcagaaggccatgaagg 28633

                     
Query: 241   ccgtctcc 248
              |||||||
Sbjct: 28634 tcgtctcc 28641



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 760   actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
             ||||||||| | || |||||||||||||||||||||| ||| |||| ||||| ||||
Sbjct: 29192 actactacgcgagggacatgagcatggaggagaaccccaacccgtgtgccatttgct 29248
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  194 bits (98), Expect = 5e-46
 Identities = 130/140 (92%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                           
Query: 258     ggcatcgacgccatctccatggacatggcgtcgcgcaagatgacggtgctcggcacggtg 317
               |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| 
Sbjct: 1491572 ggcatcgacgccatttccatggacatggcgtcgcgcaagatgacggtgatcggcacggtt 1491631

                                                                           
Query: 318     gacccggtggacgtggtgagcaagctgcgcaagg---gctgggcggcctacatcgagtcc 374
               ||||||||| ||||||||||||||||||||||||    |||| |||||||||||||||||
Sbjct: 1491632 gacccggtgaacgtggtgagcaagctgcgcaaggcgtcctggccggcctacatcgagtcc 1491691

                                   
Query: 375     gtcggcccggccaaggagcc 394
                |||||||||||||||||||
Sbjct: 1491692 ctcggcccggccaaggagcc 1491711



 Score =  111 bits (56), Expect = 5e-21
 Identities = 65/68 (95%)
 Strand = Plus / Plus

                                                                           
Query: 181     agaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaagg 240
               ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1491399 agaagattgtggtgaagctggatctccatgacaacaaggacaagcagaaggccatgaagg 1491458

                       
Query: 241     ccgtctcc 248
                |||||||
Sbjct: 1491459 tcgtctcc 1491466



 Score = 58.0 bits (29), Expect = 7e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 760     actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
               ||||||||| | || |||||||||||||||||||||| ||| |||| ||||| ||||
Sbjct: 1492017 actactacgcgagggacatgagcatggaggagaaccccaacccgtgtgccatttgct 1492073



 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 823     gagtcgcgcgtgcgtgcgtgc 843
               |||||||||||||||||||||
Sbjct: 4013943 gagtcgcgcgtgcgtgcgtgc 4013963
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  165 bits (83), Expect = 4e-37
 Identities = 124/137 (90%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                            
Query: 261      atcgacgccatctccatggacatggcgtcgcgcaagatgacggtgctcggcacggtggac 320
                ||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||| 
Sbjct: 13222311 atcgacgccatttcgatggacatggcgtcgcggaagatgacggtgatcggcacggtggat 13222370

                                                                            
Query: 321      ccggtggacgtggtgagcaagctgcgcaagg---gctgggcggcctacatcgagtccgtc 377
                ||||||||||||||||||||||| |||||||     |||||||||||||||||||| |||
Sbjct: 13222371 ccggtggacgtggtgagcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtc 13222430

                                 
Query: 378      ggcccggccaaggagcc 394
                || ||||||||||||||
Sbjct: 13222431 ggaccggccaaggagcc 13222447



 Score =  103 bits (52), Expect = 1e-18
 Identities = 58/60 (96%)
 Strand = Plus / Plus

                                                                            
Query: 189      gtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaaggccgtctcc 248
                |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13222113 gtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaaggccgtctcc 13222172



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                         
Query: 760      actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
                |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 13222885 actactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgct 13222941



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 929      gagaccaacaaagtttgcaagatgaaact 957
                ||||||||||||||||||||||| |||||
Sbjct: 13223242 gagaccaacaaagtttgcaagatcaaact 13223270
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score =  165 bits (83), Expect = 4e-37
 Identities = 124/137 (90%), Gaps = 3/137 (2%)
 Strand = Plus / Minus

                                                                          
Query: 261    atcgacgccatctccatggacatggcgtcgcgcaagatgacggtgctcggcacggtggac 320
              ||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||||| 
Sbjct: 108432 atcgacgccatttcgatggacatggcgtcgcggaagatgacggtgatcggcacggtggat 108373

                                                                          
Query: 321    ccggtggacgtggtgagcaagctgcgcaagg---gctgggcggcctacatcgagtccgtc 377
              ||||||||||||||||||||||| |||||||     |||||||||||||||||||| |||
Sbjct: 108372 ccggtggacgtggtgagcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtc 108313

                               
Query: 378    ggcccggccaaggagcc 394
              || ||||||||||||||
Sbjct: 108312 ggaccggccaaggagcc 108296



 Score =  103 bits (52), Expect = 1e-18
 Identities = 58/60 (96%)
 Strand = Plus / Minus

                                                                          
Query: 189    gtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaaggccgtctcc 248
              |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108630 gtggtgaagctggacctgcatgacaacaaggacaagcagaaggccatgaaggccgtctcc 108571



 Score = 81.8 bits (41), Expect = 5e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                       
Query: 760    actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
              |||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 107858 actactacgtccgcaacatgagcatggaggagaaccccaactcgtgcgccatttgct 107802



 Score = 50.1 bits (25), Expect = 0.016
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 929    gagaccaacaaagtttgcaagatgaaact 957
              ||||||||||||||||||||||| |||||
Sbjct: 107501 gagaccaacaaagtttgcaagatcaaact 107473
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>emb|CT832600.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA118K04, full
           insert sequence
          Length = 1025

 Score =  157 bits (79), Expect = 1e-34
 Identities = 181/215 (84%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| ||||||||||||||| |  | || |||||   ||| ||||||||||||||||||
Sbjct: 148 aagaaaatcgtggtgaagctgaacgtgcacgacaaggcggagaagcagaaggccatgaag 207

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||| | |||| ||||||||||||   | |||||||||||||||   |  ||||||
Sbjct: 208 gccgtctcggcgctcatcggcatcgacgagctgtccatggacatggcgagccagaagatg 267

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagggctgggcg 359
           |||||| |||| | ||||||||||||| |||||||||||||||||||||||   ||||||
Sbjct: 268 acggtgatcgggatggtggacccggtgaacgtggtgagcaagctgcgcaagtcgtgggcg 327

                                              
Query: 360 gcctacatcgagtccgtcggcccggccaaggagcc 394
           ||   ||||||||||||||| ||||| ||||||||
Sbjct: 328 gcgaccatcgagtccgtcgggccggcgaaggagcc 362



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 566 caagaaggacgacgcggcggccaagaaggacggcgacaag 605
           ||||||||||| ||  ||||||||||||||||||||||||
Sbjct: 450 caagaaggacggcgatgcggccaagaaggacggcgacaag 489



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 779 gagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 642 gagcatggaggaaaaccccaactcctgcgccatctgct 679
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>ref|NM_001071683.1| Oryza sativa (japonica cultivar-group) Os10g0532300 (Os10g0532300)
           mRNA, complete cds
          Length = 931

 Score =  157 bits (79), Expect = 1e-34
 Identities = 181/215 (84%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| ||||||||||||||| |  | || |||||   ||| ||||||||||||||||||
Sbjct: 148 aagaaaatcgtggtgaagctgaacgtgcacgacaaggcggagaagcagaaggccatgaag 207

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||| | |||| ||||||||||||   | |||||||||||||||   |  ||||||
Sbjct: 208 gccgtctcggcgctcatcggcatcgacgagctgtccatggacatggcgagccagaagatg 267

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagggctgggcg 359
           |||||| |||| | ||||||||||||| |||||||||||||||||||||||   ||||||
Sbjct: 268 acggtgatcgggatggtggacccggtgaacgtggtgagcaagctgcgcaagtcgtgggcg 327

                                              
Query: 360 gcctacatcgagtccgtcggcccggccaaggagcc 394
           ||   ||||||||||||||| ||||| ||||||||
Sbjct: 328 gcgaccatcgagtccgtcgggccggcgaaggagcc 362



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 566 caagaaggacgacgcggcggccaagaaggacggcgacaag 605
           ||||||||||| ||  ||||||||||||||||||||||||
Sbjct: 450 caagaaggacggcgatgcggccaagaaggacggcgacaag 489



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 779 gagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 642 gagcatggaggaaaaccccaactcctgcgccatctgct 679
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>dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035E16, full
           insert sequence
          Length = 935

 Score =  157 bits (79), Expect = 1e-34
 Identities = 181/215 (84%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           ||||| ||||||||||||||| |  | || |||||   ||| ||||||||||||||||||
Sbjct: 151 aagaaaatcgtggtgaagctgaacgtgcacgacaaggcggagaagcagaaggccatgaag 210

                                                                       
Query: 240 gccgtctccgtgctcgtcggcatcgacgccatctccatggacatggcgtcgcgcaagatg 299
           |||||||| | |||| ||||||||||||   | |||||||||||||||   |  ||||||
Sbjct: 211 gccgtctcggcgctcatcggcatcgacgagctgtccatggacatggcgagccagaagatg 270

                                                                       
Query: 300 acggtgctcggcacggtggacccggtggacgtggtgagcaagctgcgcaagggctgggcg 359
           |||||| |||| | ||||||||||||| |||||||||||||||||||||||   ||||||
Sbjct: 271 acggtgatcgggatggtggacccggtgaacgtggtgagcaagctgcgcaagtcgtgggcg 330

                                              
Query: 360 gcctacatcgagtccgtcggcccggccaaggagcc 394
           ||   ||||||||||||||| ||||| ||||||||
Sbjct: 331 gcgaccatcgagtccgtcgggccggcgaaggagcc 365



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 566 caagaaggacgacgcggcggccaagaaggacggcgacaag 605
           ||||||||||| ||  ||||||||||||||||||||||||
Sbjct: 453 caagaaggacggcgatgcggccaagaaggacggcgacaag 492



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 779 gagcatggaggagaacccaaactcgtgcgccatctgct 816
           |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 645 gagcatggaggaaaaccccaactcctgcgccatctgct 682
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>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
             sequence
          Length = 194361

 Score =  107 bits (54), Expect = 8e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                         
Query: 273   tccatggacatggcgtcgcgcaagatgacggtgctcggcacggtggacccggtggacgtg 332
             |||||||||||||||   |  |||||||||||| |||| | ||||||||||||| |||||
Sbjct: 61446 tccatggacatggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtg 61387

                                                                         
Query: 333   gtgagcaagctgcgcaagggctgggcggcctacatcgagtccgtcggcccggccaaggag 392
             ||||||||||||||||||   ||||||||   ||||||||||||||| ||||| ||||||
Sbjct: 61386 gtgagcaagctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggag 61327

               
Query: 393   cc 394
             ||
Sbjct: 61326 cc 61325



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 566   caagaaggacgacgcggcggccaagaaggacggcgacaag 605
             ||||||||||| ||  ||||||||||||||||||||||||
Sbjct: 61237 caagaaggacggcgatgcggccaagaaggacggcgacaag 61198



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 181   agaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaagg 240
             |||| ||||||||||||||| |  | || |||||   ||| |||||||||||||||||||
Sbjct: 61672 agaaaatcgtggtgaagctgaacgtgcacgacaaggcggagaagcagaaggccatgaagg 61613

                    
Query: 241   ccgtctc 247
             |||||||
Sbjct: 61612 ccgtctc 61606



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 779   gagcatggaggagaacccaaactcgtgcgccatctgct 816
             |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 61045 gagcatggaggaaaaccccaactcctgcgccatctgct 61008
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score =  107 bits (54), Expect = 8e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                            
Query: 273      tccatggacatggcgtcgcgcaagatgacggtgctcggcacggtggacccggtggacgtg 332
                |||||||||||||||   |  |||||||||||| |||| | ||||||||||||| |||||
Sbjct: 20183711 tccatggacatggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtg 20183652

                                                                            
Query: 333      gtgagcaagctgcgcaagggctgggcggcctacatcgagtccgtcggcccggccaaggag 392
                ||||||||||||||||||   ||||||||   ||||||||||||||| ||||| ||||||
Sbjct: 20183651 gtgagcaagctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggag 20183592

                  
Query: 393      cc 394
                ||
Sbjct: 20183591 cc 20183590



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 566      caagaaggacgacgcggcggccaagaaggacggcgacaag 605
                ||||||||||| ||  ||||||||||||||||||||||||
Sbjct: 20183502 caagaaggacggcgatgcggccaagaaggacggcgacaag 20183463



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 181      agaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaagg 240
                |||| ||||||||||||||| |  | || |||||   ||| |||||||||||||||||||
Sbjct: 20183937 agaaaatcgtggtgaagctgaacgtgcacgacaaggcggagaagcagaaggccatgaagg 20183878

                       
Query: 241      ccgtctc 247
                |||||||
Sbjct: 20183877 ccgtctc 20183871



 Score = 52.0 bits (26), Expect = 0.004
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 779      gagcatggaggagaacccaaactcgtgcgccatctgct 816
                |||||||||||| ||||| ||||| |||||||||||||
Sbjct: 20183310 gagcatggaggaaaaccccaactcctgcgccatctgct 20183273
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>gb|AY105811.1| Zea mays PCO068837 mRNA sequence
          Length = 525

 Score =  105 bits (53), Expect = 3e-19
 Identities = 56/57 (98%)
 Strand = Plus / Plus

                                                                    
Query: 760 actactacgtgcggaacatgagcatggaggagaacccaaactcgtgcgccatctgct 816
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 actactacgtgcgcaacatgagcatggaggagaacccaaactcgtgcgccatctgct 292
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>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome
          Length = 5631606

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 581     ggcggccaagaaggacggcgaca 603
               |||||||||||||||||||||||
Sbjct: 1946850 ggcggccaagaaggacggcgaca 1946872
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>ref|XM_502533.1| Yarrowia lipolytica CLIB122, YALI0D07480g predicted mRNA
          Length = 1305

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 585  gccaagaaggacggcgacaagaa 607
            |||||||||||||||||||||||
Sbjct: 1201 gccaagaaggacggcgacaagaa 1223
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 46.1 bits (23), Expect = 0.26
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 585    gccaagaaggacggcgacaagaa 607
              |||||||||||||||||||||||
Sbjct: 955201 gccaagaaggacggcgacaagaa 955179
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 224     gcagaaggccatgaaggccgtctccg 249
               |||||||||||||||||||| |||||
Sbjct: 2513120 gcagaaggccatgaaggccggctccg 2513095
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>emb|BX897674.1| Neurospora crassa DNA linkage group IV BAC clone B2N18
          Length = 113778

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 156   ggccggatcggagccatggcgg 177
             ||||||||||||||||||||||
Sbjct: 47788 ggccggatcggagccatggcgg 47809
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>gb|U84501.1|CBU84501 Caenorhabditis briggsae cuticle collagen (Cbcol-12) gene, complete
            cds
          Length = 2247

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 196  agctggagctccatgacaacaaggacaagc 225
            ||||||||||||| |||||| |||||||||
Sbjct: 1523 agctggagctccaggacaaccaggacaagc 1552
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>gb|AC190174.3| Pan troglodytes BAC clone CH251-539J21 from chromosome 7, complete
              sequence
          Length = 192481

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     ctagctactcccattattctc 94
              |||||||||||||||||||||
Sbjct: 170618 ctagctactcccattattctc 170598
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>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm
          Length = 1367119

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 355     gggcggcctacatcgagtccgtcggcccg 383
               ||||||| |||||||| ||||||||||||
Sbjct: 1076950 gggcggcgtacatcgactccgtcggcccg 1076922
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>emb|CT829363.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI013E10, full
           insert sequence
          Length = 993

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           |||||| | ||| |||||||||| || || ||  ||||||| ||||||||||| || || 
Sbjct: 224 aagaagcttgtgctgaagctggacctgcacgatgacaaggataagcagaaggcgatcaaa 283

                    
Query: 240 gccgtctcc 248
           |||||||||
Sbjct: 284 gccgtctcc 292
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>emb|CT829362.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA004J18, full
           insert sequence
          Length = 996

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 180 aagaagatcgtggtgaagctggagctccatgacaacaaggacaagcagaaggccatgaag 239
           |||||| | ||| |||||||||| || || ||  ||||||| ||||||||||| || || 
Sbjct: 229 aagaagcttgtgctgaagctggacctgcacgatgacaaggataagcagaaggcgatcaaa 288

                    
Query: 240 gccgtctcc 248
           |||||||||
Sbjct: 289 gccgtctcc 297
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>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence
          Length = 193749

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 830   gcgtgcgtgcgtgcgtcttga 850
             |||||||||||||||||||||
Sbjct: 42095 gcgtgcgtgcgtgcgtcttga 42115
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>gb|AC146040.2| Pan troglodytes BAC clone RP43-97N16 from 7, complete sequence
          Length = 175808

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     ctagctactcccattattctc 94
              |||||||||||||||||||||
Sbjct: 160962 ctagctactcccattattctc 160982
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>gb|AC007036.3| Homo sapiens BAC clone RP11-112E16 from 7, complete sequence
          Length = 167700

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     ctagctactcccattattctc 94
              |||||||||||||||||||||
Sbjct: 129881 ctagctactcccattattctc 129861
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>ref|NM_061808.1| Caenorhabditis elegans C33C12.9 (C33C12.9) mRNA, complete cds
          Length = 705

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1008 acatttgtatattttgaaatt 1028
            |||||||||||||||||||||
Sbjct: 633  acatttgtatattttgaaatt 653
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>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 164012

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 790   agaacccaaactcgtgcgccatctg 814
             |||||||||||||||| ||||||||
Sbjct: 79363 agaacccaaactcgtgggccatctg 79339
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>dbj|AB220607.1| Uncultured bacterium phaC gene for PHA synthase, partial cds,
           clone:M-28
          Length = 482

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 344 gcgcaagggctgggcggcctacatc 368
           |||||||||||||| ||||||||||
Sbjct: 117 gcgcaagggctgggaggcctacatc 141
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 823   gagtcgcgcgtgcgtgcgtgc 843
             |||||||||||||||||||||
Sbjct: 85536 gagtcgcgcgtgcgtgcgtgc 85516
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>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains the
             3' end of a novel gene and a CpG island, complete sequence
          Length = 103011

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 790   agaacccaaactcgtgcgccatctg 814
             |||||||||||||||| ||||||||
Sbjct: 42786 agaacccaaactcgtgggccatctg 42762
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>gb|AF016662.1| Caenorhabditis elegans cosmid C33C12, complete sequence
          Length = 39935

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1008  acatttgtatattttgaaatt 1028
             |||||||||||||||||||||
Sbjct: 26642 acatttgtatattttgaaatt 26622
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>gb|AC123621.10| Mus musculus chromosome 19, clone RP23-74D13, complete sequence
          Length = 197720

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 930   agaccaacaaagtttgcaagatgaa 954
             |||||||||||||||||||| ||||
Sbjct: 50542 agaccaacaaagtttgcaaggtgaa 50518
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>gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538, complete sequence
          Length = 42301

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 825   gtcgcgcgtgcgtgcgtgcgtcttg 849
             |||| ||||||||||||||||||||
Sbjct: 33044 gtcgtgcgtgcgtgcgtgcgtcttg 33020
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>gb|AF018955.1|AF018955 Ectothiorhodospira shaposhnikovii chlorin reductase subunit (bchZ)
            gene, partial cds; ORFQ' pseudogene, complete sequence;
            and B880 antenna beta-subunit (pufB), B880 antenna
            alpha-subunit (pufA), reaction center L subunit (pufL),
            reaction center M subunit (pufM), and reaction center
            four-heme cytochrome subunit (pufC) genes, complete cds
          Length = 4440

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  catcttccgatcgccttctcc 133
            |||||||||||||||||||||
Sbjct: 1657 catcttccgatcgccttctcc 1677


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 109,950,214
Number of extensions: 6358649
Number of successful extensions: 225697
Number of sequences better than 10.0: 37
Number of HSP's gapped: 225675
Number of HSP's successfully gapped: 70
Length of query: 1062
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1039
Effective length of database: 18,503,978,556
Effective search space: 19225633719684
Effective search space used: 19225633719684
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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