| Clone Name | FLbaf31l17 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g15430:12002.t01336:unspliced-genomic conserved hypothetical protein| Length = 4525 Score = 32.2 bits (64), Expect = 1.8 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +1 / -2 Query: 238 HLQPRHVNSNPQTFLTCPFSN 300 H+ PRH+ +N + TCPF+N Sbjct: 3015 HVTPRHLRTNKVSCSTCPFTN 2953
>LOC_Os01g02180:12001.t00113:unspliced-genomic expressed protein| Length = 3682 Score = 31.3 bits (62), Expect = 3.3 Identities = 8/25 (32%), Positives = 15/25 (60%) Frame = +1 / -3 Query: 241 LQPRHVNSNPQTFLTCPFSNHMCFL 315 + P++ N + CPF+N +CF+ Sbjct: 2165 VNPKNKRKNSSNLIPCPFNNFLCFI 2091
>LOC_Os07g42440:12007.t03896:unspliced-genomic hydroxyacid oxidase 1, putative, expressed| Length = 5526 Score = 30.9 bits (61), Expect = 4.5 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -2 / -3 Query: 310 NTYDY*TDTLGTFEGSNL 257 NTY +* DTL FEGSNL Sbjct: 1144 NTYIF*VDTLVDFEGSNL 1091
>LOC_Os06g05950:12006.t00481:unspliced-genomic expressed protein| Length = 2413 Score = 30.9 bits (61), Expect = 4.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 / -3 Query: 250 RHVNSNPQTFLTCPFSNHM 306 R VN +P T+L+CPF N M Sbjct: 1319 RVVNPSPATYLSCPFGNCM 1263
>LOC_Os01g63290:12001.t05698:unspliced-genomic sialin, putative, expressed| Length = 8085 Score = 30.9 bits (61), Expect = 4.5 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -3 / +1 Query: 135 LDTHALASHVHTCKCNLKWIEL 70 L++H+L H+ CKC+ W+ L Sbjct: 7756 LNSHSLIGHLRLCKCHNMWMAL 7821
>LOC_Os02g47400:12002.t04324:unspliced-genomic carboxylic ester hydrolase, putative, expressed| Length = 3837 Score = 30.4 bits (60), Expect = 6.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +1 / -1 Query: 118 KCMSIQATCFPRVLKCFFFSKRVT*NVL 201 K + +ATCF +V KC SK V *N L Sbjct: 2316 KSTAFKATCF*QVFKCNLLSKFVL*NCL 2233
>LOC_Os05g48690:12005.t04303:unspliced-genomic 6b-interacting protein 1, putative, expressed| Length = 3446 Score = 26.3 bits (51), Expect(2) = 7.8 Identities = 9/27 (33%), Positives = 14/27 (51%) Frame = -3 / -2 Query: 96 KCNLKWIELGRSLDN*LVWSKMSSWSR 16 KCN+K + + L ++W SW R Sbjct: 1906 KCNVKLLTIEIQLHTGIIWGD*KSWPR 1826 Score = 24.0 bits (46), Expect(2) = 7.8 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -3 / -1 Query: 231 VFPWRGLPRGQNISSNPFRKKK 166 VFPW P + + N +KKK Sbjct: 3062 VFPWSARPSNELHTDNLHQKKK 2997
>LOC_Os12g03730:12012.t00265:unspliced-genomic metal ion binding protein, putative| Length = 6284 Score = 29.9 bits (59), Expect = 8.6 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 / -2 Query: 135 LDTHALASHVHTCKCNLKWIELGRSL 58 L AL H+H+C C+L +++ SL Sbjct: 2509 LKQKALVYHLHSCSCHLDYLQRNHSL 2432
>LOC_Os11g03910:12011.t00281:unspliced-genomic metal ion binding protein, putative, expressed| Length = 2895 Score = 29.9 bits (59), Expect = 8.6 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -3 / -2 Query: 135 LDTHALASHVHTCKCNLKWIELGRSL 58 L AL H+H+C C+L +++ SL Sbjct: 2501 LKQKALVYHLHSCSCHLDYLQRNHSL 2424
>LOC_Os05g48520:12005.t04286:unspliced-genomic glyoxal oxidase, putative, expressed| Length = 2734 Score = 29.9 bits (59), Expect = 8.6 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 / -1 Query: 96 CMYGRG*QVHEYPGYLFPSCLEMFFFF*TGYLKCF 200 C GRG +P F S L F+ * GYLK F Sbjct: 2500 CQTGRGVMFTLFPLCNFTSLLAQVFYL*NGYLK*F 2396
>LOC_Os05g48510:12005.t04285:unspliced-genomic phenylalanyl-tRNA synthetase beta chain, putative, expressed| Length = 6488 Score = 29.9 bits (59), Expect = 8.6 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 / +3 Query: 96 CMYGRG*QVHEYPGYLFPSCLEMFFFF*TGYLKCF 200 C GRG +P F S L F+ * GYLK F Sbjct: 6372 CQTGRGVMFTLFPLCNFTSLLAQVFYL*NGYLK*F 6476
>LOC_Os05g46030:12005.t04091:unspliced-genomic myosin head family protein, expressed| Length = 18780 Score = 29.9 bits (59), Expect = 8.6 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 / -2 Query: 141 SSLDTHALASHVHTCKCN 88 SSL H+L SH HTC N Sbjct: 4370 SSLSVHSLTSHDHTCSKN 4317
>LOC_Os02g49930:12002.t04577:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass| Length = 1157 Score = 29.9 bits (59), Expect = 8.6 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +1 / -3 Query: 226 ED*DHLQPRHVNSNPQTFLTCPFSNHM 306 ED +H P H+ + + L CP S+H+ Sbjct: 747 EDHNHRYPSHLMKSRHSLLICPHSSHL 667 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 123,837,111 Number of extensions: 1615547 Number of successful extensions: 5368 Number of sequences better than 10.0: 13 Length of query: 130 Length of database: 55,613,886 Length adjustment: 47 Effective length of query: 83 Effective length of database: 52,968,820 Effective search space: 4396412060 Effective search space used: 4396412060 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)