ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31l17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF099914.1| Caenorhabditis elegans cosmid C40A11, complete se... 46 0.092
2gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, c... 44 0.36
3emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.7
4gb|BC086300.1| Xenopus laevis cDNA clone IMAGE:3399754 40 5.7
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
6emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
7emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-1... 40 5.7
8emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-9... 40 5.7

>gb|AF099914.1| Caenorhabditis elegans cosmid C40A11, complete sequence
          Length = 29575
 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 80   catttcaagttacatttgcatgt 102
            |||||||||||||||||||||||
Sbjct: 1118 catttcaagttacatttgcatgt 1140



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>gb|AC055845.15| Homo sapiens chromosome 11, clone RP11-682B13, complete sequence
          Length = 155304

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 203    cctctaggtaaacctcgccaagggaa 228
              |||||||||||||||| |||||||||
Sbjct: 143629 cctctaggtaaacctccccaagggaa 143654



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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    catctttgaccacactagttaatt 54
             |||||||||||||||| |||||||
Sbjct: 47639 catctttgaccacacttgttaatt 47662



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>gb|BC086300.1| Xenopus laevis cDNA clone IMAGE:3399754
          Length = 1446

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  gatccatttcaagttacatttgca 99
           |||||||||||||| |||||||||
Sbjct: 752 gatccatttcaagtaacatttgca 775



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 31       catctttgaccacactagttaatt 54
                |||||||||||||||| |||||||
Sbjct: 35092550 catctttgaccacacttgttaatt 35092573



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>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
             complete sequence
          Length = 144670

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    catctttgaccacactagttaatt 54
             |||||||||||||||| |||||||
Sbjct: 29053 catctttgaccacacttgttaatt 29076



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>emb|AL355835.3|CNS05TCP Human chromosome 14 DNA sequence BAC R-196N22 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 172374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    catctttgaccacactagtt 50
             ||||||||||||||||||||
Sbjct: 57930 catctttgaccacactagtt 57911



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>emb|AL161751.3|CNS01RHG Human chromosome 14 DNA sequence BAC R-96D24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184692

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    catctttgaccacactagtt 50
             ||||||||||||||||||||
Sbjct: 94094 catctttgaccacactagtt 94075


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 45,873,734
Number of extensions: 2112349
Number of successful extensions: 135722
Number of sequences better than 10.0: 8
Number of HSP's gapped: 135722
Number of HSP's successfully gapped: 8
Length of query: 392
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 370
Effective length of database: 18,508,616,841
Effective search space: 6848188231170
Effective search space used: 6848188231170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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