ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf34m06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os07g0671000:Os07g0671000 | 140 | 7e-34 | 2 | Os03g0346200:Os03g0346200 | 112 | 2e-25 | 3 | AY659938:Os01g0257300 | 98 | 4e-21 | 4 | AK070626:Os01g0257300 | 98 | 4e-21 | 5 | AK104536:Os02g0460200 | 87 | 9e-18 | 6 | AK065150:Os02g0460200 | 87 | 9e-18 | 7 | AK060911:Os02g0460200 | 87 | 9e-18 | 8 | AY304538:Os01g0933500 | 86 | 2e-17 | 9 | AK120187:Os04g0282400 | 82 | 3e-16 | 10 | AY341852:Os03g0758900 | 28 | 3.9 | 11 | AK059527: | 27 | 6.6 | 12 | Os02g0195700:Os02g0195700 | 27 | 6.7 | 13 | AK121288:Os03g0226600 | 27 | 6.7 | 14 | AK069173:Os03g0226600 | 27 | 6.7 | 15 | Os02g0138000:Os02g0138000 | 27 | 8.7 |
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>Os07g0671000:Os07g0671000 | Length = 106 Score = 140 bits (352), Expect = 7e-34 Identities = 68/108 (62%), Positives = 81/108 (75%) Frame = +3 Query: 33 MAGGGVWVFRKDGVMELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWE 212 MAGGGVWVFR +GVMEL LV+V +E +RS EALE+RLG+LGWE Sbjct: 1 MAGGGVWVFRNNGVMELEEQATSRKA--------LVHVATSEVIRSTEALERRLGALGWE 52 Query: 213 RYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKV 356 RYYE+R +QLHRRDG DLI++PRDF++FRSTHMYD+VVKNR HFKV Sbjct: 53 RYYEDRATLQLHRRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKV 100
>Os03g0346200:Os03g0346200 | Length = 101 Score = 112 bits (279), Expect = 2e-25 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = +3 Query: 162 MRSLEALEQRLGSLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNR 341 M SL+ALE+RL LGWERYYE+R +VQLHRRDGG DLI+LPRDFA+FRSTHMYD+V+KNR Sbjct: 1 MGSLQALERRLAGLGWERYYEDRAVVQLHRRDGGADLISLPRDFARFRSTHMYDVVLKNR 60 Query: 342 HHFK 353 HFK Sbjct: 61 DHFK 64
>AY659938:Os01g0257300 | Length = 109 Score = 97.8 bits (242), Expect = 4e-21 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Frame = +3 Query: 45 GVWVFRKDGVMELMSA--GVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWERY 218 GVWVF K+GV+ L+ LV+ P+ + + S ALE RL +LGWERY Sbjct: 3 GVWVF-KNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERY 61 Query: 219 YENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 YE+ + Q H+R G +DLI+LP DF+ F S HMYDIVVKNR F+VVD Sbjct: 62 YEDPSLFQFHKR-GSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
>AK070626:Os01g0257300 | Length = 109 Score = 97.8 bits (242), Expect = 4e-21 Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Frame = +3 Query: 45 GVWVFRKDGVMELMSA--GVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWERY 218 GVWVF K+GV+ L+ LV+ P+ + + S ALE RL +LGWERY Sbjct: 3 GVWVF-KNGVVRLVEKQQATAGTAVAGGRRKALVHTPSGQVVSSYAALEARLTALGWERY 61 Query: 219 YENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 YE+ + Q H+R G +DLI+LP DF+ F S HMYDIVVKNR F+VVD Sbjct: 62 YEDPSLFQFHKR-GSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 108
>AK104536:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 9e-18 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AK065150:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 9e-18 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AK060911:Os02g0460200 | Length = 122 Score = 86.7 bits (213), Expect = 9e-18 Identities = 53/115 (46%), Positives = 69/115 (60%), Gaps = 9/115 (7%) Frame = +3 Query: 45 GVWVFRKDGVM---------ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLG 197 GVWVF KDG++ E SAG LV+VP+ E + S E LE+RL Sbjct: 3 GVWVF-KDGIVRRVENPGSEESSSAG---DGGGGGRRKVLVHVPSGEVVASYEVLERRLR 58 Query: 198 SLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 LGWERY + ++Q H+R V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 59 ELGWERYLTDPCLLQFHQRST-VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 112
>AY304538:Os01g0933500 | Length = 127 Score = 85.9 bits (211), Expect = 2e-17 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 20/127 (15%) Frame = +3 Query: 45 GVWVFRKDGVMELMS------------AGVQXXXXXXXXXXXLVYVPANETMRSLEALEQ 188 GVWVFR +GV++L+ G L+++P E + S +LE+ Sbjct: 3 GVWVFR-NGVVKLVENPPASANSGGGGGGGGGGGGGGIRRKALLHMPTGEVVTSYASLER 61 Query: 189 RLGSLGWERYYENRD--------IVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRH 344 +L +LGWERYY ++Q H+R VDLI+LP+DF++F S HMYDIVVKNR Sbjct: 62 KLAALGWERYYSGGGGAAAAAAMMLQFHKRSS-VDLISLPKDFSQFGSVHMYDIVVKNRD 120 Query: 345 HFKVVDI 365 F+V+D+ Sbjct: 121 AFRVIDV 127
>AK120187:Os04g0282400 | Length = 118 Score = 81.6 bits (200), Expect = 3e-16 Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 5/111 (4%) Frame = +3 Query: 45 GVWVFRKDGVM-----ELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGW 209 GVWVF +DG++ E S G + LV+VP++E + S E LE+RL LGW Sbjct: 3 GVWVF-EDGMVRRADSEAPSRG-RGVGGGGGGGKVLVHVPSSEVVTSYEVLERRLRELGW 60 Query: 210 ERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 ERY + ++Q H+R V LI++PRDF++ + HMYD+VVK R+ F+V D Sbjct: 61 ERYLNDPCLLQFHQR-STVHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 110
>AY341852:Os03g0758900 | Length = 1002 Score = 28.1 bits (61), Expect = 3.9 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 Query: 546 FFFFYKNIIICYTETIS 496 FFFF+ ++C TET+S Sbjct: 96 FFFFFSGFVVCKTETLS 112
>AK059527: | Length = 371 Score = 27.3 bits (59), Expect = 6.6 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +3 Query: 210 ERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVV 359 ER + + + +H R G V +++PRD F++ +I+ + + FK V Sbjct: 273 ERSPDPKAGLYIHSRTGAVTKVSIPRDCLAFQTGEALEIITQGK--FKAV 320
>Os02g0195700:Os02g0195700 | Length = 131 Score = 27.3 bits (59), Expect = 6.7 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = -1 Query: 145 TYTSAFLLGAAAADGCTPALISSITPSFRNTHTPP 41 T T+ LG G TPA + P+ R PP Sbjct: 6 TGTTPAKLGTGTGKGTTPAWVGKAAPNLRRVRQPP 40
>AK121288:Os03g0226600 | Length = 1176 Score = 27.3 bits (59), Expect = 6.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 154 FAGTYTSAFLLGAAAADGCTPALISSITPSFRNTHTPPP 38 F Y++ A A P I TPSFR HT PP Sbjct: 1024 FPVQYSNVHHFPAPAFSYAPPEPIRKTTPSFRVMHTSPP 1062
>AK069173:Os03g0226600 | Length = 898 Score = 27.3 bits (59), Expect = 6.7 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = -1 Query: 154 FAGTYTSAFLLGAAAADGCTPALISSITPSFRNTHTPPP 38 F Y++ A A P I TPSFR HT PP Sbjct: 746 FPVQYSNVHHFPAPAFSYAPPEPIRKTTPSFRVMHTSPP 784
>Os02g0138000:Os02g0138000 | Length = 694 Score = 26.9 bits (58), Expect = 8.7 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = +3 Query: 387 PSYYFPRPRLQVCFANKRTWTMVCV 461 PS+ FP PRL+ +A + W + Sbjct: 45 PSWAFPNPRLRAAYAALQAWKQTAI 69 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 12,243,637 Number of extensions: 230846 Number of successful extensions: 806 Number of sequences better than 10.0: 15 Number of HSP's gapped: 798 Number of HSP's successfully gapped: 15 Length of query: 182 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 88 Effective length of database: 11,636,001 Effective search space: 1023968088 Effective search space used: 1023968088 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
