ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf34m06 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g22510:12003.t02002:unspliced-genomic expressed protein| Length = 861 Score = 156 bits (336), Expect(2) = 6e-43 Identities = 61/76 (80%), Positives = 70/76 (92%) Frame = +3 / +2 Query: 135 LVYVPANETMRSLEALEQRLGSLGWERYYENRDIVQLHRRDGGVDLIALPRDFAKFRSTH 314 LVYVPANETM SL+ALE+RL LGWERYYE+R +VQLHRRDGG DLI+LPRDFA+FRSTH Sbjct: 104 LVYVPANETMGSLQALERRLAGLGWERYYEDRAVVQLHRRDGGADLISLPRDFARFRSTH 283 Query: 315 MYDIVVKNRHHFKVVD 362 MYD+V+KNR HFKV+D Sbjct: 284 MYDVVLKNRDHFKVLD 331 Score = 37.3 bits (75), Expect(2) = 6e-43 Identities = 13/17 (76%), Positives = 16/17 (94%) Frame = +3 / +1 Query: 33 MAGGGVWVFRKDGVMEL 83 MAG GVWVF++DGVM+L Sbjct: 10 MAGTGVWVFKRDGVMQL 60 Score = 74.4 bits (156), Expect(2) = 5e-18 Identities = 31/44 (70%), Positives = 33/44 (75%) Frame = -1 / -1 Query: 367 *MSTTLKWCLFLTTMSYMCVDRNFAKSRGSAMRSTPPSRRWSCT 236 *+S TLKW FL T SYM V+R AKSRG MRS PPSRRWSCT Sbjct: 336 *LSRTLKWSRFLRTTSYMWVERKRAKSRGREMRSAPPSRRWSCT 205 Score = 37.7 bits (76), Expect(2) = 5e-18 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = -3 / -1 Query: 83 QLHHPVLPEHPHASPRH 33 QLHHPV EHPH PRH Sbjct: 60 QLHHPVPLEHPHPRPRH 10 Score = 36.3 bits (73), Expect(3) = 4e-09 Identities = 18/30 (60%), Positives = 21/30 (70%) Frame = -3 / -3 Query: 308 GPELRKVSRERDEVDAAVAPVELHDVSVLV 219 G E +V+ E DEV AAVA VELH +VLV Sbjct: 277 GAEAGEVAGEGDEVGAAVAAVELHHGAVLV 188 Score = 33.1 bits (66), Expect(3) = 4e-09 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -1 / -2 Query: 82 SSITPSFRNTHTPPPAMDL 26 S ITPS NTHTP PA+ L Sbjct: 59 SCITPSLLNTHTPVPAIQL 3 Score = 29.9 bits (59), Expect(3) = 4e-09 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -2 / -2 Query: 354 P*SGACS*RRCRTCVWTGTSQS 289 P*SG S* R RTC W+G+ +S Sbjct: 323 P*SGRGS*GRRRTCGWSGSGRS 258 Score = 33.1 bits (66), Expect(2) = 0.001 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2 / +1 Query: 299 VPVHTHVRHRRQEQAPLQG 355 +P+H HVR R QE PLQG Sbjct: 268 LPLHPHVRRRPQEPRPLQG 324 Score = 30.4 bits (60), Expect(2) = 0.001 Identities = 11/16 (68%), Positives = 11/16 (68%) Frame = +1 / +2 Query: 34 WRGEACGCSGRTG*WS 81 WRG CGCS TG* S Sbjct: 11 WRGRGCGCSRGTG*CS 58
>LOC_Os07g47450:12007.t04381:unspliced-genomic flowering promoting factor-like 1, putative, expressed| Length = 452 Score = 150 bits (323), Expect = 5e-36 Identities = 63/106 (59%), Positives = 77/106 (72%) Frame = +3 / +1 Query: 69 GVMELMSAGVQXXXXXXXXXXXLVYVPANETMRSLEALEQRLGSLGWERYYENRDIVQLH 248 GV + GV LV+V +E +RS EALE+RLG+LGWERYYE+R +QLH Sbjct: 61 GVWVFRNNGVMELEEQATSRKALVHVATSEVIRSTEALERRLGALGWERYYEDRATLQLH 240 Query: 249 RRDGGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVDI*TCIIHL 386 RRDG DLI++PRDF++FRSTHMYD+VVKNR HFKVVD+ T I HL Sbjct: 241 RRDGSADLISIPRDFSRFRSTHMYDVVVKNRDHFKVVDLHT*IYHL 378 Score = 66.1 bits (138), Expect(2) = 2e-17 Identities = 28/41 (68%), Positives = 29/41 (70%) Frame = -1 / -1 Query: 361 STTLKWCLFLTTMSYMCVDRNFAKSRGSAMRSTPPSRRWSC 239 STTLKW FLTT SYM V+R KSRG MRS PSR WSC Sbjct: 353 STTLKWSRFLTTTSYMWVERKREKSRGMEMRSALPSRLWSC 231 Score = 42.8 bits (87), Expect(2) = 2e-17 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -3 / -3 Query: 83 QLHHPVLPEHPHASPRH 33 QLHHPV+PEHPH S RH Sbjct: 99 QLHHPVVPEHPHPSSRH 49 Score = 37.7 bits (76), Expect(3) = 2e-12 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -1 / -1 Query: 82 SSITPSFRNTHTPPPAM 32 SSITP F NTHTPPPA+ Sbjct: 98 SSITPLFLNTHTPPPAI 48 Score = 35.9 bits (72), Expect(3) = 2e-12 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = -2 / -2 Query: 360 RQP*SGACS*RRCRTCVWTGTSQS 289 R+P*SG S*RR RTC W+G+ +S Sbjct: 352 RRP*SGRGS*RRRRTCGWSGSGRS 281 Score = 35.0 bits (70), Expect(3) = 2e-12 Identities = 17/30 (56%), Positives = 21/30 (70%) Frame = -3 / -3 Query: 308 GPELRKVSRERDEVDAAVAPVELHDVSVLV 219 G E +V+ + DEV AAVAPVEL +VLV Sbjct: 300 GAEAGEVAGDGDEVGAAVAPVELQGGAVLV 211 Score = 40.5 bits (82), Expect(2) = 2e-08 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 / +1 Query: 33 MAGGGVWVFRKDGVMEL 83 MAGGGVWVFR +GVMEL Sbjct: 49 MAGGGVWVFRNNGVMEL 99 Score = 38.2 bits (77), Expect(2) = 2e-08 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +2 / +3 Query: 290 LCEVPVHTHVRHRRQEQAPLQGCR 361 L +P+H HVR RRQE PLQG R Sbjct: 282 LLPLPLHPHVRRRRQEPRPLQGRR 353 Score = 39.1 bits (79), Expect = 0.024 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = +1 / +2 Query: 34 WRGEACGCSGRTG*WS 81 WR E CGCSG TG*WS Sbjct: 50 WREEGCGCSGTTG*WS 97
>LOC_Os01g15340:12001.t01385:unspliced-genomic FPF1, putative, expressed| Length = 893 Score = 61.1 bits (127), Expect(2) = 2e-19 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +3 / +3 Query: 258 GGVDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 G +DLI+LP DF+ F S HMYDIVVKNR F+VVD Sbjct: 315 GSLDLISLPADFSAFSSVHMYDIVVKNRDSFRVVD 419 Score = 54.2 bits (112), Expect(2) = 2e-19 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = +3 / +3 Query: 135 LVYVPANETMRSLEALEQRLGSLGWERYYENRDIVQLHRR 254 LV+ P+ + + S ALE RL +LGWERYYE+ + Q H+R Sbjct: 195 LVHTPSGQVVSSYAALEARLTALGWERYYEDPSLFQFHKR 314 Score = 40.9 bits (83), Expect(2) = 0.001 Identities = 20/38 (52%), Positives = 22/38 (57%) Frame = -1 / -2 Query: 370 V*MSTTLKWCLFLTTMSYMCVDRNFAKSRGSAMRSTPP 257 +* STT K FLTTMSYM + KS G MRS P Sbjct: 427 I*ASTTRKESRFLTTMSYMWTEEKAEKSAGREMRSREP 314 Score = 22.1 bits (42), Expect(2) = 0.001 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -3 / -1 Query: 86 HQLHHPVL 63 HQ HHPVL Sbjct: 140 HQSHHPVL 117
>LOC_Os01g70730:12001.t06371:unspliced-genomic FLP1, putative, expressed| Length = 878 Score = 62.9 bits (131), Expect(2) = 2e-16 Identities = 24/36 (66%), Positives = 32/36 (88%) Frame = +3 / +3 Query: 264 VDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVDI*T 371 VDLI+LP+DF++F S HMYDIVVKNR F+V+D+*+ Sbjct: 435 VDLISLPKDFSQFGSVHMYDIVVKNRDAFRVIDV*S 542 Score = 41.8 bits (85), Expect(2) = 2e-16 Identities = 14/29 (48%), Positives = 22/29 (75%) Frame = +3 / +3 Query: 135 LVYVPANETMRSLEALEQRLGSLGWERYY 221 L+++P E + S +LE++L +LGWERYY Sbjct: 285 LLHMPTGEVVTSYASLERKLAALGWERYY 371 Score = 40.0 bits (81), Expect(2) = 2e-04 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = -1 / -2 Query: 361 STTLKWCLFLTTMSYMCVDRNFAKSRGSAMRST 263 S T K FLTTMSYM + N+ KS GS +RST Sbjct: 532 SMTRKASRFLTTMSYMWTEPNWEKSLGSEIRST 434 Score = 25.8 bits (50), Expect(2) = 2e-04 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 / -2 Query: 82 SSITPSFRNTHTP 44 +S T FRNTHTP Sbjct: 199 TSFTTPFRNTHTP 161
>LOC_Os02g26210:12002.t02315:unspliced-genomic flowering promoting factor-like 1, putative, expressed| Length = 1212 Score = 52.8 bits (109), Expect(2) = 3e-16 Identities = 21/33 (63%), Positives = 27/33 (81%) Frame = +3 / +3 Query: 264 VDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 V LI++PRDF+KF+ HMYDIVVK R+ F+V D Sbjct: 432 VHLISVPRDFSKFKLVHMYDIVVKTRNVFEVRD 530 Score = 51.5 bits (106), Expect(2) = 3e-16 Identities = 20/40 (50%), Positives = 28/40 (70%) Frame = +3 / +3 Query: 135 LVYVPANETMRSLEALEQRLGSLGWERYYENRDIVQLHRR 254 LV+VP+ E + S E LE+RL LGWERY + ++Q H+R Sbjct: 306 LVHVPSGEVVASYEVLERRLRELGWERYLTDPCLLQFHQR 425 Score = 37.3 bits (75), Expect = 0.086 Identities = 18/33 (54%), Positives = 19/33 (57%) Frame = -1 / -3 Query: 361 STTLKWCLFLTTMSYMCVDRNFAKSRGSAMRST 263 S T K LTTMSYM N KSRG+ MR T Sbjct: 529 SRTSKTLRVLTTMSYMWTSLNLEKSRGTEMRCT 431
>LOC_Os04g21350:12004.t01868:unspliced-genomic flowering promoting factor-like 1, putative, expressed| Length = 890 Score = 52.4 bits (108), Expect(2) = 4e-15 Identities = 20/40 (50%), Positives = 29/40 (72%) Frame = +3 / +2 Query: 135 LVYVPANETMRSLEALEQRLGSLGWERYYENRDIVQLHRR 254 LV+VP++E + S E LE+RL LGWERY + ++Q H+R Sbjct: 191 LVHVPSSEVVTSYEVLERRLRELGWERYLNDPCLLQFHQR 310 Score = 48.3 bits (99), Expect(2) = 4e-15 Identities = 18/33 (54%), Positives = 26/33 (78%) Frame = +3 / +2 Query: 264 VDLIALPRDFAKFRSTHMYDIVVKNRHHFKVVD 362 V LI++PRDF++ + HMYD+VVK R+ F+V D Sbjct: 317 VHLISVPRDFSRLKLVHMYDVVVKTRNVFEVRD 415
>LOC_Os11g04190:12011.t00310:unspliced-genomic auxin efflux carrier component 1b, putative, expressed| Length = 3300 Score = 34.5 bits (69), Expect(2) = 0.16 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -3 / +3 Query: 77 HHPVLPEHPHASPRHG 30 HHP+LP HP PRHG Sbjct: 522 HHPLLPLHPPQHPRHG 569 Score = 23.1 bits (44), Expect(2) = 0.16 Identities = 8/19 (42%), Positives = 12/19 (63%) Frame = -1 / +2 Query: 292 KSRGSAMRSTPPSRRWSCT 236 ++R S + P SR W+CT Sbjct: 188 RTRRSLLHRQP*SRWWTCT 244
>LOC_Os02g01300:12002.t00030:unspliced-genomic invertase inhibitor precursor, putative, expressed| Length = 1524 Score = 35.9 bits (72), Expect = 0.22 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 / +2 Query: 323 HRRQEQAPLQGCRHLDMHHTFT*LLLSPAKVASMF 427 H+ Q+QAPL RHL HH +L PA + F Sbjct: 1304 HQGQDQAPLPARRHLPRHHLLALAILLPATTTN*F 1408
>LOC_Os03g17370:12003.t01514:unspliced-genomic ATPase, coupled to transmembrane movement of substances, putative| Length = 2298 Score = 33.1 bits (66), Expect = 1.5 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -1 / +2 Query: 118 AAAADGCTPALISSITPSFRNTHTPPP 38 AA+A GC A SS TPS ++ +PPP Sbjct: 773 AASAGGCPSASTSSTTPSSCSSTSPPP 853
>LOC_Os09g39370:12009.t03402:unspliced-genomic conserved hypothetical protein| Length = 1988 Score = 25.4 bits (49), Expect(2) = 1.6 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 / -3 Query: 86 HQLHHPVLPEHPHASP 39 H LHH +PEH P Sbjct: 828 HHLHHRAVPEHRRPVP 781 Score = 24.9 bits (48), Expect(2) = 1.6 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -3 / -1 Query: 53 PHASPRHGSG*SC 15 PH+SPRH + SC Sbjct: 701 PHSSPRHTTATSC 663
>LOC_Os02g05080:12002.t00406:unspliced-genomic hypothetical protein| Length = 1972 Score = 27.2 bits (53), Expect(2) = 2.1 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -1 / -3 Query: 343 CLFLTTMSYMCVDRNFAKSRGSAMRSTPPSRRWSCT 236 C T + C+ R ++ G+ +T P+RR CT Sbjct: 1754 CARRATSTPRCIRRGRRRATGAPCDATAPARRSPCT 1647 Score = 22.6 bits (43), Expect(2) = 2.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -2 / -2 Query: 468 RTTRTPLSTCAYLQN 424 RTT TP+ST +L + Sbjct: 1884 RTTSTPVSTAKFLSS 1840
>LOC_Os06g41020:12006.t03797:unspliced-genomic expressed protein| Length = 5912 Score = 30.4 bits (60), Expect(2) = 2.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 / +3 Query: 121 GAAAADGCTPALISSITPSFRNTHTPP 41 G+ ADG P S+ T S R T TPP Sbjct: 570 GSRTADGRAPTSSSAATSSVRKTTTPP 650 Score = 24.0 bits (46), Expect(2) = 2.1 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -1 / +3 Query: 295 AKSRGSAMRSTPPSRR 248 A+S +A STPP+RR Sbjct: 228 ARSTSTATTSTPPTRR 275
>LOC_Os01g07790:12001.t00659:unspliced-genomic polygalacturonase precursor, putative| Length = 2793 Score = 32.2 bits (64), Expect = 2.8 Identities = 11/20 (55%), Positives = 11/20 (55%) Frame = -3 / -2 Query: 461 HAHHCPRALICKTYLQPWPG 402 H H ICK YL PWPG Sbjct: 2027 HKHAYSWLCICKLYLMPWPG 1968
>LOC_Os11g39920:12011.t03534:unspliced-genomic expressed protein| Length = 3825 Score = 32.2 bits (64), Expect = 2.8 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 / +3 Query: 10 RKQDHPDPWRGEACGCSG 63 R++ P PWR CGC G Sbjct: 1722 RRRSRPSPWRTTRCGCGG 1775
>LOC_Os05g33230:12005.t02918:unspliced-genomic cobalt ion transporter, putative, expressed| Length = 5708 Score = 32.2 bits (64), Expect = 2.8 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +1 / -2 Query: 28 DPWRGEACGCSGRTG*WS 81 D WRG CG S RTG W+ Sbjct: 403 DRWRGGRCGASRRTGRWA 350
>LOC_Os03g10880:12003.t00889:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 2965 Score = 32.2 bits (64), Expect = 2.8 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 / +3 Query: 308 HTHVRHRRQEQAPLQGCRHLDMHH 379 H RH R E LQG RH D HH Sbjct: 1158 HVPARHDRDEGEGLQGHRHGDTHH 1229
>LOC_Os07g12170:12007.t01089:unspliced-genomic ADP-ribosylation factor 1, putative, expressed| Length = 3417 Score = 24.4 bits (47), Expect(2) = 3.7 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 / +3 Query: 320 RHRRQEQAPLQGCRHLDMHH 379 R RR++ PLQ D HH Sbjct: 465 RRRRKDHHPLQAQARRDRHH 524 Score = 24.4 bits (47), Expect(2) = 3.7 Identities = 7/15 (46%), Positives = 11/15 (73%) Frame = +3 / +3 Query: 444 WTMVCVSFYMSVCLY 488 W+ CVSFY+ + L+ Sbjct: 537 WSATCVSFYIMLYLF 581
>LOC_Os05g15140:12005.t01286:unspliced-genomic expressed protein| Length = 4925 Score = 31.8 bits (63), Expect = 3.9 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 / -1 Query: 312 HMYDIVVKNRHHFKVVDI*TCIIHLPSYYFPRPRLQVCFAN 434 H+ IV+ + HF V + +C + Y+F RLQ C N Sbjct: 1790 HLLSIVLTSAKHFFVDPLSSC*CGMTQYHFHTQRLQ*CLYN 1668
>LOC_Os06g39880:12006.t03685:unspliced-genomic cytochrome P450 72A1, putative, expressed| Length = 2535 Score = 31.8 bits (63), Expect = 3.9 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +1 / +3 Query: 397 TFPGQGCKYVLQISARGQWCACRSI*VYVC 486 T P GC ++ +RG WC RS+ V VC Sbjct: 2370 THPLLGCFHLFSSPSRGFWCMYRSMHVPVC 2459
>LOC_Os01g22249:12001.t01959:unspliced-genomic peroxidase 1 precursor, putative, expressed| Length = 9664 Score = 31.8 bits (63), Expect = 3.9 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = +1 / -3 Query: 25 PDPWRGEACGCSGRTG*W 78 P PWR GC GR G W Sbjct: 8693 PSPWRWVGAGCRGRPGRW 8640
>LOC_Os06g21220:12006.t01939:unspliced-genomic glycine-rich cell wall structural protein precursor, putative| Length = 1589 Score = 25.4 bits (49), Expect(2) = 3.9 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -1 / -3 Query: 535 LQKHHHMLHRN 503 L HHH LHRN Sbjct: 1518 LHTHHHTLHRN 1486 Score = 23.5 bits (45), Expect(2) = 3.9 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = -3 / -3 Query: 482 TYTHIERHAHH 450 T+ HI RH HH Sbjct: 1467 THIHIHRHNHH 1435
>LOC_Os08g02350:12008.t04358:unspliced-genomic expressed protein| Length = 16855 Score = 26.3 bits (51), Expect(2) = 4.4 Identities = 8/22 (36%), Positives = 12/22 (54%) Frame = -1 / +3 Query: 346 WCLFLTTMSYMCVDRNFAKSRG 281 WC+F Y C +R K++G Sbjct: 9396 WCIFSCCNIYTCFNRTLWKNKG 9461 Score = 22.1 bits (42), Expect(2) = 4.4 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 / +3 Query: 448 VHVRLFAKHTCNLGRGK 398 +HVR F +TCN GK Sbjct: 9225 LHVRSFWAYTCN*TFGK 9275
>LOC_Os08g44820:12008.t04205:unspliced-genomic no apical meristem protein, expressed| Length = 4657 Score = 24.4 bits (47), Expect(2) = 4.8 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = -1 / +1 Query: 259 PSRRWSCT 236 PSRRW+CT Sbjct: 247 PSRRWTCT 270 Score = 24.0 bits (46), Expect(2) = 4.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = -1 / +1 Query: 148 GTYTSAFLLGAAAADGCTPALISSITPSFRNTHTPPPA 35 GT A AA G + A ++ TP+ PPPA Sbjct: 283 GTSPPAPASAAATPSGTSSAASTASTPTAPAPTAPPPA 396
>LOC_Os11g03700:12011.t00261:unspliced-genomic histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1,| putative Length = 2399 Score = 31.3 bits (62), Expect = 5.3 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -2 / -2 Query: 372 MSRCRQP*SGACS*RRCRTC 313 M CRQP S CS*+RC C Sbjct: 760 MK*CRQPESHLCS*KRCNQC 701
>LOC_Os02g57650:12002.t05336:unspliced-genomic NAC domain-containing protein 78, putative, expressed| Length = 4075 Score = 31.3 bits (62), Expect = 5.3 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -1 / +3 Query: 139 TSAFLLGAAAADGCTPALISSITPSFRNTHTPPPA 35 T++ +AAA G TP+ S+ T S R T P PA Sbjct: 381 TTSAAASSAAASGSTPSPRSTSTASSRGTSPPSPA 485
>LOC_Os07g34710:12007.t03146:unspliced-genomic peroxidase 27 precursor, putative, expressed| Length = 2171 Score = 25.4 bits (49), Expect(2) = 6.9 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = -2 / +2 Query: 327 RCRTCVWTGTSQS 289 RCRT WTG++ S Sbjct: 722 RCRTRAWTGSTSS 760 Score = 22.6 bits (43), Expect(2) = 6.9 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -1 / +2 Query: 268 STPPSRRW 245 STPP RRW Sbjct: 758 STPPRRRW 781
>LOC_Os11g18990:12011.t01669:unspliced-genomic expressed protein| Length = 6266 Score = 30.9 bits (61), Expect = 7.3 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +3 / -2 Query: 369 TCIIHLPSYYFPRPRL 416 TCI+H+ SYY RP+L Sbjct: 5482 TCILHIKSYYLCRPQL 5435
>LOC_Os08g20020:12008.t01820:unspliced-genomic cytoskeletal protein, putative, expressed| Length = 5102 Score = 30.9 bits (61), Expect = 7.3 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 / -1 Query: 303 RSTHMYDIVVKNRHHFKVVDI*TCIIHLPSY 395 R TH D+VV F + TCI HL +Y Sbjct: 3509 RHTHTQDVVVVEHECFNISYFGTCIPHLTNY 3417
>LOC_Os07g09060:12007.t00781:unspliced-genomic methylmalonate-semialdehyde dehydrogenase, putative, expressed| Length = 6829 Score = 30.9 bits (61), Expect = 7.3 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 / +2 Query: 423 CFANKRTWTMVCVSFYMSVC 482 C ANK +W+ +C+ S+C Sbjct: 6710 CHANKGSWSRICICLISSIC 6769
>LOC_Os12g06420:12012.t00527:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1692 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 / -1 Query: 100 CTPALISSITPSFRNTHTPPPAMDLDDLAS 11 CT A +SI P+ N P++ +DD+AS Sbjct: 426 CTTARYTSIRPNAANPFNSKPSIPIDDIAS 337
>LOC_Os12g03670:12012.t00259:unspliced-genomic D-mannose binding lectin family protein| Length = 2511 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -2 / +2 Query: 366 RCRQP*SGACS*RRCRTCVWT 304 RCR P SGA + RTC WT Sbjct: 1067 RCRTPTSGASTSTAARTCRWT 1129
>LOC_Os11g03860:12011.t00276:unspliced-genomic Ser/Thr protein kinase, putative, expressed| Length = 2711 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -2 / +3 Query: 366 RCRQP*SGACS*RRCRTCVWT 304 RCR P SGA + RTC WT Sbjct: 1113 RCRTPTSGASTSTAARTCRWT 1175
>LOC_Os09g16950:12009.t01482:unspliced-genomic protein kinase, putative, expressed| Length = 3209 Score = 30.9 bits (61), Expect = 7.3 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -1 / +1 Query: 289 SRGSAMRSTPPSRRWSC 239 S S+ RS+ PSRRWSC Sbjct: 2377 SASSSSRSSAPSRRWSC 2427
>LOC_Os09g08870:12009.t00681:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6111 Score = 30.9 bits (61), Expect = 7.3 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -1 / -2 Query: 343 CLFLTTMSYMCVDRNFAKSRGSAMRSTPPSRRWSCT 236 C + SY C R+ + R SA R SR W C+ Sbjct: 719 CCSRRSRSYSCT*RSSSSRRRSASRRASVSRAWRCS 612
>LOC_Os08g43000:12008.t04028:unspliced-genomic CC-NBS-LRR, putative, expressed| Length = 3633 Score = 30.9 bits (61), Expect = 7.3 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -1 / +2 Query: 361 STTLKWCLFLTTMSYMCVDRNFAKSRGSAMRSTPPSRRWSCT 236 +TT +W L +S M D F+ S GS +++ S RW T Sbjct: 515 TTTRRWWLSCCWISDMSRDCRFSLSSGSGVQARRRSPRWCTT 640
>LOC_Os08g38920:12008.t03626:unspliced-genomic caffeoyl-CoA O-methyltransferase 2, putative, expressed| Length = 1040 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 / -3 Query: 313 CVDRNFAKSRGSAMRSTPPSRRW 245 C R +S G+ RSTP SRRW Sbjct: 693 CARRRRPRSPGAPARSTPGSRRW 625
>LOC_Os08g24330:12008.t02203:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3573 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -2 / +1 Query: 534 YKNIIICYTETISSTSTNIHSYRTTRTPLSTCAYL 430 Y+ I +CYT + S +T +H + L+TC L Sbjct: 3172 YRRIHMCYTTWMISITTKLHPQLERKRLLTTCTQL 3276
>LOC_Os05g48220:12005.t04256:unspliced-genomic 60S ribosomal protein L33-B, putative, expressed| Length = 2115 Score = 30.9 bits (61), Expect = 7.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 / +2 Query: 121 GAAAADGCTPALISSITPSFRNTHTPPPAM 32 G A+A GCT A SS T R+ PPP + Sbjct: 107 GKASA*GCTSAAPSSATRGDRSLSPPPPCV 196
>LOC_Os04g32404:12004.t02919:unspliced-genomic expressed protein| Length = 5345 Score = 30.9 bits (61), Expect = 7.3 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +1 / -3 Query: 10 RKQDHPDPWRGEACGCSGRTG 72 R + P PWR GCSGR G Sbjct: 4902 RARRGPCPWRASRSGCSGRRG 4840
>LOC_Os03g63074:12003.t05528:unspliced-genomic Ser/Thr protein phosphatase family protein, expressed| Length = 7153 Score = 30.9 bits (61), Expect = 7.3 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -1 / +2 Query: 118 AAAADGCTPALISSITPSFRNTHTPPPA 35 ++AA TP+ +S TPS ++ TPPP+ Sbjct: 338 SSAAPPATPSCTASSTPSTASSTTPPPS 421
>LOC_Os03g55164:12003.t04780:unspliced-genomic OsWRKY4 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 7661 Score = 30.9 bits (61), Expect = 7.3 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = -2 / +2 Query: 546 FFFFYKNIIICYTETIS 496 FFFF+ ++C TET+S Sbjct: 380 FFFFFSGFVVCKTETLS 430
>LOC_Os02g39910:12002.t03627:unspliced-genomic protein binding protein, putative, expressed| Length = 1771 Score = 28.6 bits (56), Expect(2) = 7.8 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = -3 / -2 Query: 92 GAHQLHHPVLPEHPHASP 39 G H+L HP PHA+P Sbjct: 162 GGHRLEHPASDVEPHAAP 109 Score = 22.1 bits (42), Expect(2) = 7.8 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -2 / -1 Query: 366 RCRQP*SGACS*RR 325 RCR *+G CS RR Sbjct: 841 RCRTR*TGPCSSRR 800
>LOC_Os10g41749:12010.t03533:unspliced-genomic crcB-like protein, expressed| Length = 4008 Score = 30.4 bits (60), Expect = 10.0 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -3 / -1 Query: 77 HHPVLPEHPHASPRHGSG 24 H VLP +P PRHG G Sbjct: 2940 HREVLPSNPATEPRHGQG 2887
>LOC_Os04g41470:12004.t03706:unspliced-genomic protein ariadne-1, putative, expressed| Length = 7221 Score = 30.4 bits (60), Expect = 10.0 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -3 / -3 Query: 77 HHPVLPEHPHASPRHGS 27 +H + P HPHA P+H S Sbjct: 472 NHELRPHHPHAIPKHSS 422
>LOC_Os03g31230:12003.t02720:unspliced-genomic DNA binding protein, putative, expressed| Length = 3736 Score = 30.4 bits (60), Expect = 10.0 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = -3 / -3 Query: 473 HIERHAHHCPRALICKTYLQP 411 H E H HHCPRA+ + +P Sbjct: 2627 HQEPHHHHCPRAMAPICFAEP 2565
>LOC_Os01g40390:12001.t03564:unspliced-genomic conserved hypothetical protein| Length = 4519 Score = 30.4 bits (60), Expect = 10.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 / +3 Query: 86 HQLHHPVLPEHPHASPRHGSG 24 HQL HP+ + A PRHG G Sbjct: 456 HQLRHPLGRQPRQAPPRHGGG 518 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 187,082,854 Number of extensions: 2802906 Number of successful extensions: 16835 Number of sequences better than 10.0: 46 Length of query: 182 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 134 Effective length of database: 52,912,542 Effective search space: 7090280628 Effective search space used: 7090280628 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
