ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf34m06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q479J6:COAX_DECAR Type III pantothenate kinase - Dechloromonas a... 30 4.2

>Q479J6:COAX_DECAR Type III pantothenate kinase - Dechloromonas aromatica (strain RCB)|
          Length = 238
 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 296 EVPVHTHVRHRRQEQAPLQGCRHL 367
           ++ VH  VRHR  +  PL+G RHL
Sbjct: 211 QIAVHLVVRHRLADNLPLEGLRHL 234


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 72,072,466
Number of extensions: 1321368
Number of successful extensions: 3515
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3513
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 76
Effective length of database: 71,611,169
Effective search space: 5442448844
Effective search space used: 5442448844
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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