ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31k10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9Z213:ALEX_RAT Protein ALEX - Rattus norvegicus (Rat) 33 1.6
2O35181:NRG3_MOUSE Pro-neuregulin-3, membrane-bound isoform precu... 32 3.5
3P56975:NRG3_HUMAN Pro-neuregulin-3, membrane-bound isoform precu... 32 3.5

>Q9Z213:ALEX_RAT Protein ALEX - Rattus norvegicus (Rat)|
          Length = 738
 Score = 32.7 bits (73), Expect = 1.6
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = +2

Query: 173 LSVWDLQHFMVLLRPDPARTPTQLQLQEQESWLVFDFQPRNPEDALAAFSVLSRSKIP 346
           LS+W      V+ RP  +R P QL+   Q    + D QPR  E AL+A  +  R K P
Sbjct: 263 LSIWTAPQSQVMARPSKSREP-QLRASTQRDPHLSDKQPRQ-ETALSAAPLQRRQKSP 318



to top

>O35181:NRG3_MOUSE Pro-neuregulin-3, membrane-bound isoform precursor - Mus musculus|
           (Mouse)
          Length = 713

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 182 THSASTPKTSGPGPDPEGPSAARPPRTLRTS 90
           T +A+    +G GPD  G  AA PPR LR S
Sbjct: 25  TAAAAAAAAAGGGPDGGGEGAAEPPRELRCS 55



to top

>P56975:NRG3_HUMAN Pro-neuregulin-3, membrane-bound isoform precursor - Homo sapiens|
           (Human)
          Length = 720

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 182 THSASTPKTSGPGPDPEGPSAARPPRTLRTS 90
           T +A+    +G GPD  G  AA PPR LR S
Sbjct: 25  TAAAAAAAAAGGGPDGGGEGAAEPPRELRCS 55


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 113,095,513
Number of extensions: 2286410
Number of successful extensions: 9084
Number of sequences better than 10.0: 3
Number of HSP's gapped: 9070
Number of HSP's successfully gapped: 3
Length of query: 255
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 144
Effective length of database: 70,239,694
Effective search space: 10114515936
Effective search space used: 10114515936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top