ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf31k09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9QY40:PLXB3_MOUSE Plexin-B3 precursor - Mus musculus (Mouse) 38 0.095
2P32870:CYA1_DROME Ca(2+)/calmodulin-responsive adenylate cyclase... 33 3.1
3Q5R1Q1:CD3E_FELCA T-cell surface glycoprotein CD3 epsilon chain ... 32 5.2
4P32298:GRK4_HUMAN G protein-coupled receptor kinase 4 - Homo sap... 32 6.8
5Q924A2:CIC_MOUSE Protein capicua homolog - Mus musculus (Mouse) 32 8.9

>Q9QY40:PLXB3_MOUSE Plexin-B3 precursor - Mus musculus (Mouse)|
          Length = 1892
 Score = 38.1 bits (87), Expect = 0.095
 Identities = 33/120 (27%), Positives = 49/120 (40%)
 Frame = +2

Query: 941  RLCINLHLTSGSGCSSIDTGCYAYGEITAHHQFYGDYNVLLFQCGQDDKAEVIDGRLPLL 1120
            RLC   + T G G S ++     YG +T+        +   + CG +     I GR PL 
Sbjct: 311  RLC---YTTGGQGPSGMEEATVEYG-VTSRCVTLPPDSPESYPCGDEHTPSPIAGRQPL- 365

Query: 1121 RTWAAVPIYLEPILIIKLNLCVFTNSGHVNDGHTISFQGDLTFNHDQHEKTICNADHGKV 1300
                      E   +++L   +   +    DGHTI+F GD      Q  K   N+ HG+V
Sbjct: 366  ----------EAQPLLQLGQSISAVAALQTDGHTIAFLGD---TQGQLHKVFLNSSHGQV 412



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>P32870:CYA1_DROME Ca(2+)/calmodulin-responsive adenylate cyclase - Drosophila|
            melanogaster (Fruit fly)
          Length = 2248

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 443  RHSYCNPHHHYCGRTQQAARYNHHLQQE 360
            RH   + HHH+  R QQ  RYNH  +QE
Sbjct: 1949 RHQRYHHHHHHQQRQQQQQRYNHVQEQE 1976



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>Q5R1Q1:CD3E_FELCA T-cell surface glycoprotein CD3 epsilon chain precursor - Felis|
           silvestris catus (Cat)
          Length = 202

 Score = 32.3 bits (72), Expect = 5.2
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = -3

Query: 964 EMKVDTQSGLYSTIHRHKNHVYITAISCWHCVDNDTVTCIRVHTE*VVCYVNPVIIL--W 791
           EM+       Y++    KN++Y+ A  C +CV+ DT+T + +    V   +  ++++  W
Sbjct: 87  EMENSGYYACYTSNSLEKNYLYLKARVCQNCVEVDTMTAVAIVVADVCITLGFLLLVYYW 146

Query: 790 DFNSNAEIVLKCR 752
             N  A  V   R
Sbjct: 147 SKNKKASSVTMMR 159



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>P32298:GRK4_HUMAN G protein-coupled receptor kinase 4 - Homo sapiens (Human)|
          Length = 578

 Score = 32.0 bits (71), Expect = 6.8
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 21  GHMPYKKTYQDYQRHRIDLGFNNLPRAAAPKLSRENRESCR*ALPPNPKEHVG 179
           GH P+KK  +  +   +D    N     + K S + +  CR  L  NP + +G
Sbjct: 382 GHSPFKKYKEKVKWEEVDQRIKNDTEEYSEKFSEDAKSICRMLLTKNPSKRLG 434



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>Q924A2:CIC_MOUSE Protein capicua homolog - Mus musculus (Mouse)|
          Length = 2510

 Score = 31.6 bits (70), Expect = 8.9
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 78   GFNNLPRAAAPKLSRENRESCR*ALPPNPKEHVGVPSSALCRPAS 212
            G  NL +      S+E+RE  R    P P    G P++ LCRPA+
Sbjct: 1529 GGGNLLQTLVLPPSKEDREGTRVPSAPAPPLAYGAPAAPLCRPAA 1573


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 254,474,553
Number of extensions: 5658511
Number of successful extensions: 14448
Number of sequences better than 10.0: 5
Number of HSP's gapped: 14436
Number of HSP's successfully gapped: 5
Length of query: 490
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 373
Effective length of database: 68,593,924
Effective search space: 25585533652
Effective search space used: 25585533652
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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