ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf28n11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102673:Os05g0565000 356 1e-98
2AK121755:Os01g0752300 347 8e-96
3Os01g0666900:Os01g0666900 340 5e-94
4AK110262: 273 1e-73
5D21301:Os05g0565000 221 6e-58
6AK106681:Os02g0616600 32 0.71
7AK122132:Os06g0128500 31 1.2
8AK058563:Os06g0128500 31 1.2
9AK122111:Os12g0440300 30 2.1

>AK102673:Os05g0565000 |
          Length = 178
 Score =  356 bits (913), Expect = 1e-98
 Identities = 169/178 (94%), Positives = 175/178 (98%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           MVA+RFHQYQVVGRALPTPGDE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1   MVAYRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEIFE+NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTATV+FKLCKRDNTKQFHNS IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHNSNIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178



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>AK121755:Os01g0752300 |
          Length = 178

 Score =  347 bits (889), Expect = 8e-96
 Identities = 166/178 (93%), Positives = 171/178 (96%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           M AFRFHQYQVVGR LPTP DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTATV+FKLCKRDNTKQFH S IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178



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>Os01g0666900:Os01g0666900 |
          Length = 195

 Score =  340 bits (873), Expect = 5e-94
 Identities = 169/195 (86%), Positives = 174/195 (89%), Gaps = 17/195 (8%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKF----------W------ 200
           MVAFRFHQYQVVGRALPTPGDE PKIYRMKLWATNEVRAKSKF          W      
Sbjct: 1   MVAFRFHQYQVVGRALPTPGDEHPKIYRMKLWATNEVRAKSKFCSSYLVRFADWGACPVC 60

Query: 201 -YFLRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG 377
            YFLRKLKKVKKSNGQMLAINEIFE+NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG
Sbjct: 61  RYFLRKLKKVKKSNGQMLAINEIFERNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG 120

Query: 378 AVEQMYTEMASRHRVRSPCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTR 557
           AVEQMYTEMASRHRVR PCIQIIKTATV+FKLCKRDNTKQFHN  IKFPLVY+KVRPPTR
Sbjct: 121 AVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHNGSIKFPLVYRKVRPPTR 180

Query: 558 KLKTTYKATRPNLFM 602
           KLKTT+KA+RPNLFM
Sbjct: 181 KLKTTFKASRPNLFM 195



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>AK110262: |
          Length = 182

 Score =  273 bits (698), Expect = 1e-73
 Identities = 125/175 (71%), Positives = 149/175 (85%)
 Frame = +3

Query: 78  FRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAI 257
           F+FHQYQVVGR LPT  D  P +YRMK+WA + VRAKSKFWYFLR+L++VKK+NGQ++A+
Sbjct: 7   FKFHQYQVVGRHLPTDNDPTPTVYRMKVWAQDAVRAKSKFWYFLRRLRRVKKANGQIIAV 66

Query: 258 NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCI 437
           NEIFE+ PTT+KN+GIW+RYQSRTGYHNMYKEYRDTTLNGAV+QMY+EMASRHRVR PCI
Sbjct: 67  NEIFERKPTTVKNFGIWVRYQSRTGYHNMYKEYRDTTLNGAVDQMYSEMASRHRVRFPCI 126

Query: 438 QIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           QIIKTATV    CKR NT QFH+SKIKFPL ++  RP   + ++ YKA RPN+ M
Sbjct: 127 QIIKTATVPASACKRSNTLQFHDSKIKFPLTHRLARPSAPEHRSLYKAHRPNVAM 181



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>D21301:Os05g0565000 |
          Length = 110

 Score =  221 bits (562), Expect = 6e-58
 Identities = 103/110 (93%), Positives = 108/110 (98%)
 Frame = +3

Query: 273 KNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKT 452
           +NPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQIIKT
Sbjct: 1   RNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKT 60

Query: 453 ATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           ATV+FKLCKRDNTKQFHNS IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM
Sbjct: 61  ATVHFKLCKRDNTKQFHNSNIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 110



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>AK106681:Os02g0616600 |
          Length = 107

 Score = 31.6 bits (70), Expect = 0.71
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 532 TRRSGHQPGS*RPPTRQPGRTCS 600
           TRRSGH P S R P   PG +CS
Sbjct: 60  TRRSGHLPHSLRQPPPSPGASCS 82



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>AK122132:Os06g0128500 |
          Length = 145

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +3

Query: 129 DEQPKIYRMKLWATNEVRAKS-----KFWYFLRKLKKVKKSNGQMLAINEIFEKNPTTI 290
           +++P  +  + W  +E+R KS     K WY L K K +  S  QML    +   NP  +
Sbjct: 50  EDKPPPHYGRSWKASELRLKSWDDLQKLWYVLLKEKNMLMSQRQMLHSENMRFPNPERV 108



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>AK058563:Os06g0128500 |
          Length = 145

 Score = 30.8 bits (68), Expect = 1.2
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
 Frame = +3

Query: 129 DEQPKIYRMKLWATNEVRAKS-----KFWYFLRKLKKVKKSNGQMLAINEIFEKNPTTI 290
           +++P  +  + W  +E+R KS     K WY L K K +  S  QML    +   NP  +
Sbjct: 50  EDKPPPHYGRSWKASELRLKSWDDLQKLWYVLLKEKNMLMSQRQMLHSENMRFPNPERV 108



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>AK122111:Os12g0440300 |
          Length = 92

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = +1

Query: 529 CTRRSGHQPGS*RPPTRQPGRTCS 600
           C RRSGH P S R P   PG  CS
Sbjct: 28  CYRRSGHLPLSLRLPPLSPGARCS 51


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,784,353
Number of extensions: 559132
Number of successful extensions: 1294
Number of sequences better than 10.0: 9
Number of HSP's gapped: 1293
Number of HSP's successfully gapped: 9
Length of query: 278
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 179
Effective length of database: 11,435,796
Effective search space: 2047007484
Effective search space used: 2047007484
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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