| Clone Name | FLbaf28n11 |
|---|---|
| Clone Library Name | barley_pub |
>Q943F3:RL18A_ORYSJ 60S ribosomal protein L18a - Oryza sativa subsp. japonica (Rice)| Length = 178 Score = 347 bits (889), Expect = 4e-95 Identities = 166/178 (93%), Positives = 171/178 (96%) Frame = +3 Query: 69 MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248 M AFRFHQYQVVGR LPTP DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+ Sbjct: 1 MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60 Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602 PCIQIIKTATV+FKLCKRDNTKQFH S IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178
>P51418:R18A2_ARATH 60S ribosomal protein L18a-2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 178 Score = 337 bits (864), Expect = 3e-92 Identities = 162/178 (91%), Positives = 170/178 (95%) Frame = +3 Query: 69 MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248 M AFRFHQYQVVGRALPT D QPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60 Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428 LAINEI+EKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120 Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602 PCIQIIKTATV KLCKR++TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA +PNLFM Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
>Q9LUD4:R18A3_ARATH 60S ribosomal protein L18a-3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 178 Score = 329 bits (844), Expect = 7e-90 Identities = 158/178 (88%), Positives = 165/178 (92%) Frame = +3 Query: 69 MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248 M FRFHQYQVVGRALPT DE PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60 Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120 Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602 PCIQIIKTATV KLCKR+ TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA++PNLFM Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
>Q9ATF5:RL18A_CASSA 60S ribosomal protein L18a - Castanea sativa (Sweet chestnut)| Length = 178 Score = 328 bits (842), Expect = 1e-89 Identities = 157/178 (88%), Positives = 166/178 (93%) Frame = +3 Query: 69 MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248 MV FRFHQYQVVGR LP+ DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM Sbjct: 1 MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60 Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428 LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR Sbjct: 61 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120 Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602 PCIQIIKTAT+ KLCKR+++KQFHNSKIKFPLV +K+RPP+RKLKT YKA+RPNLFM Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178
>Q02543:RL18A_HUMAN 60S ribosomal protein L18a - Homo sapiens (Human)| Length = 176 Score = 187 bits (476), Expect = 3e-47 Identities = 88/170 (51%), Positives = 121/170 (71%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P +KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RPN F Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>Q3T003:RL18A_BOVIN 60S ribosomal protein L18a - Bos taurus (Bovine)| Length = 176 Score = 187 bits (476), Expect = 3e-47 Identities = 88/170 (51%), Positives = 121/170 (71%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P +KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RPN F Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>P62718:RL18A_RAT 60S ribosomal protein L18a - Rattus norvegicus (Rat)| Length = 176 Score = 187 bits (474), Expect = 6e-47 Identities = 88/170 (51%), Positives = 121/170 (71%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P +KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RPN F Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>P62717:RL18A_MOUSE 60S ribosomal protein L18a - Mus musculus (Mouse)| Length = 176 Score = 187 bits (474), Expect = 6e-47 Identities = 88/170 (51%), Positives = 121/170 (71%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LPTP P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P +KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RPN F Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>Q7ZWJ4:RL18A_DANRE 60S ribosomal protein L18a - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 176 Score = 181 bits (458), Expect = 4e-45 Identities = 84/170 (49%), Positives = 121/170 (71%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK++G+++ +F Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVF 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P +KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RPN F Sbjct: 129 VQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>Q8WQI7:RL18A_SPOFR 60S ribosomal protein L18a - Spodoptera frugiperda (Fall armyworm)| Length = 177 Score = 180 bits (457), Expect = 5e-45 Identities = 82/170 (48%), Positives = 120/170 (70%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+V+GR LP+ + +P +Y+M++++ +++ AKS+FWYFLR+LKK KK+ G++++I EI Sbjct: 9 EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIP 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK+P IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R+ IQIIK Sbjct: 69 EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFHNS I+FPL R K T+ RP+ + Sbjct: 129 VEVIKASACRRPQVKQFHNSTIRFPL---PKRVHHHKRLNTFAYKRPSTY 175
>O44480:RL18A_CAEEL 60S ribosomal protein L18a - Caenorhabditis elegans| Length = 180 Score = 180 bits (456), Expect = 7e-45 Identities = 84/169 (49%), Positives = 121/169 (71%) Frame = +3 Query: 87 HQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 266 ++Y VVGR +PT + I++M+++ATN V AKS+FWYF+ L++VKK+NG++L+I ++ Sbjct: 11 NEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQV 70 Query: 267 FEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 446 FEKNP T+KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++ I I+ Sbjct: 71 FEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHIL 130 Query: 447 KTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPN 593 K TV + KR K FH++KI+FPL + R RK + + R N Sbjct: 131 KVQTVKAEDTKRAGIKMFHDAKIRFPLPH---RVTKRKNLSVFTTARQN 176
>P41093:RL18A_DROME 60S ribosomal protein L18a - Drosophila melanogaster (Fruit fly)| Length = 177 Score = 177 bits (448), Expect = 6e-44 Identities = 81/158 (51%), Positives = 116/158 (73%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LP+ + Q +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++ Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVY 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 E +P IKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+ IQIIK Sbjct: 69 ETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKL 563 ++ +R + KQFH+SKIKFPLV + RKL Sbjct: 129 VDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
>Q90YU9:RL18A_ICTPU 60S ribosomal protein L18a - Ictalurus punctatus (Channel catfish)| Length = 176 Score = 175 bits (444), Expect = 2e-43 Identities = 82/170 (48%), Positives = 118/170 (69%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + Sbjct: 9 EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 E++P +KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI+K Sbjct: 69 EQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ K + RP F Sbjct: 129 VQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175
>P0C2I0:RL20_YEAST 60S ribosomal protein L20 - Saccharomyces cerevisiae (Baker's| yeast) Length = 172 Score = 169 bits (427), Expect = 2e-41 Identities = 82/173 (47%), Positives = 119/173 (68%), Gaps = 1/173 (0%) Frame = +3 Query: 84 FHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 263 F +YQV+GR LPT +PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+ Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63 Query: 264 IFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 443 I E +PT +KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I I Sbjct: 64 INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123 Query: 444 IKTATVNFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 +K A + KR KQF +KFPL ++ +K T+ RP+ F Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-----VQKSTKTFSYKRPSTF 171
>O57561:RL18A_SALSA 60S ribosomal protein L18a - Salmo salar (Atlantic salmon)| Length = 176 Score = 168 bits (425), Expect = 3e-41 Identities = 79/170 (46%), Positives = 114/170 (67%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ + + Sbjct: 9 EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 EK P +KN+G+WLR SR+G HNMY+EYRD T + AV Q Y +M +RHR R+ I I+K Sbjct: 69 EKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMK 128 Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 + C+R KQFH+SKIKFPL ++ +R R+ + RPN F Sbjct: 129 VQEIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHNPRFTTKRPNTF 175
>P05732:RL20_SCHPO 60S ribosomal protein L20 - Schizosaccharomyces pombe (Fission| yeast) Length = 176 Score = 164 bits (416), Expect = 3e-40 Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 1/171 (0%) Frame = +3 Query: 90 QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269 +YQVVGR +PT + PK++RM+L+A NE AKS++WYFL+ + KVKK+ G+++AINEI Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 64 Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449 E P K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+I+K Sbjct: 65 EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 124 Query: 450 TATVNFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599 V K +R+ KQ N +KFPL +++ K + RP+ F Sbjct: 125 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175
>Q6M157:RLX_METMP 50S ribosomal protein LX - Methanococcus maripaludis| Length = 76 Score = 32.0 bits (71), Expect = 3.1 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = +3 Query: 348 KEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATVN 464 KEY N A+E MY+E+ S+H V+ I++++ + ++ Sbjct: 22 KEYNVLKENDALETMYSEIGSKHAVKRANIKVVEISEIS 60
>Q494D6:HIS6_BLOPB Imidazole glycerol phosphate synthase subunit hisF - Blochmannia| pennsylvanicus (strain BPEN) Length = 258 Score = 32.0 bits (71), Expect = 3.1 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%) Frame = +3 Query: 96 QVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFE- 272 Q V ++ T + Q KIY++K + + RAK W L +KKV++ + +N + + Sbjct: 123 QCVVVSIDTWHNPQKKIYQVKCYTGDSTRAKITTWQTLDWVKKVQEYGAGEIVLNMMNQD 182 Query: 273 --KNPTTI-------KNYGIWLRYQSRTG-YHNMYKEYRDTTLNGAV--EQMYTEMASRH 416 KN + K+ + L G Y + + +RD ++GA+ + ++ H Sbjct: 183 GMKNGYDLDQLRNIRKHCQVPLIASGGAGTYQHFLEAFRDADVDGALAASVFHNQIIDIH 242 Query: 417 RVRSPCIQIIKTATVNFKLC 476 +++ Q + + +LC Sbjct: 243 KLK----QFLNKEGIKIRLC 258
>P25805:CYSP_PLAFA Trophozoite cysteine proteinase precursor - Plasmodium falciparum| Length = 569 Score = 31.6 bits (70), Expect = 4.0 Identities = 18/67 (26%), Positives = 34/67 (50%) Frame = +3 Query: 171 NEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYK 350 N ++ SKF+ F+++ KV K+ + + EIF+ N +IKN+ + N + Sbjct: 217 NNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFS 276 Query: 351 EYRDTTL 371 +Y + L Sbjct: 277 DYSEEEL 283
>P60810:PRSA2_LACJO Foldase protein prsA 2 precursor - Lactobacillus johnsonii| Length = 298 Score = 31.2 bits (69), Expect = 5.2 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%) Frame = +3 Query: 180 RAKSKFWYFLRKLKKVKKSNGQMLAINEIF------EKNPTTIKNYGIWLRYQSRTGYHN 341 R S+F FL++ KKS QM+ +N + + PTT + W YQ + + Sbjct: 89 RYGSQFDSFLKENSYTKKSFKQMIELNHLSKIALKKQMKPTTSQLKEEWKDYQPKITVQH 148 Query: 342 MYKEYRDTTLNGAVEQM-----YTEMASRHRVRS 428 + RDT N +E++ + +AS++ V S Sbjct: 149 ISTTSRDTA-NTVIEKLNNGESFASLASKYSVDS 181
>Q4PFD9:PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 - Ustilago| maydis (Smut fungus) Length = 1156 Score = 30.8 bits (68), Expect = 6.9 Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 2/99 (2%) Frame = +2 Query: 245 DARHQRDL*EEPNHHQELWHLAALPEQDWVPQHVQGIP*H--HTEWCRGADVH*DGLSPP 418 D RH RD E + + A P D HV+G P W GA P Sbjct: 73 DRRHDRDRNRERDRRDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWDEGAPT-----PPT 127 Query: 419 CEIPLHSDHQDRDCQLQAMQERQYQAVPQLQD*VPPCVP 535 P+H R + R A P + PP +P Sbjct: 128 AAAPVHVSDPTRSSLNTQLPSRPIVAPPGMAPGPPPSLP 166
>O51798:MMLH_RALEJ Probable 4-methylmuconolactone transporter - Ralstonia eutropha| (strain JMP134) (Alcaligenes eutrophus) Length = 428 Score = 30.4 bits (67), Expect = 8.9 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 271 SKISLMASIWPLLFFTFFSFLRKYQNLLLART 176 ++I ++A IW LF F + YQ LL+ART Sbjct: 79 ARILVLAIIWFTLFGVLAGFAQSYQQLLIART 110
>P15283:MBHS_RHOCA Uptake hydrogenase small subunit precursor - Rhodobacter capsulatus| (Rhodopseudomonas capsulata) Length = 358 Score = 30.4 bits (67), Expect = 9.0 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -1 Query: 384 PRHHSVWCHGIPCTCC 337 PR VW HG+ CTCC Sbjct: 50 PRTPVVWVHGLECTCC 65 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 145,542,316 Number of extensions: 3164033 Number of successful extensions: 8722 Number of sequences better than 10.0: 23 Number of HSP's gapped: 8706 Number of HSP's successfully gapped: 23 Length of query: 278 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 166 Effective length of database: 69,965,399 Effective search space: 11614256234 Effective search space used: 11614256234 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)