ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf28n11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q943F3:RL18A_ORYSJ 60S ribosomal protein L18a - Oryza sativa sub... 347 4e-95
2P51418:R18A2_ARATH 60S ribosomal protein L18a-2 - Arabidopsis th... 337 3e-92
3Q9LUD4:R18A3_ARATH 60S ribosomal protein L18a-3 - Arabidopsis th... 329 7e-90
4Q9ATF5:RL18A_CASSA 60S ribosomal protein L18a - Castanea sativa ... 328 1e-89
5Q02543:RL18A_HUMAN 60S ribosomal protein L18a - Homo sapiens (Hu... 187 3e-47
6Q3T003:RL18A_BOVIN 60S ribosomal protein L18a - Bos taurus (Bovine) 187 3e-47
7P62718:RL18A_RAT 60S ribosomal protein L18a - Rattus norvegicus ... 187 6e-47
8P62717:RL18A_MOUSE 60S ribosomal protein L18a - Mus musculus (Mo... 187 6e-47
9Q7ZWJ4:RL18A_DANRE 60S ribosomal protein L18a - Danio rerio (Zeb... 181 4e-45
10Q8WQI7:RL18A_SPOFR 60S ribosomal protein L18a - Spodoptera frugi... 180 5e-45
11O44480:RL18A_CAEEL 60S ribosomal protein L18a - Caenorhabditis e... 180 7e-45
12P41093:RL18A_DROME 60S ribosomal protein L18a - Drosophila melan... 177 6e-44
13Q90YU9:RL18A_ICTPU 60S ribosomal protein L18a - Ictalurus puncta... 175 2e-43
14P0C2I0:RL20_YEAST 60S ribosomal protein L20 - Saccharomyces cere... 169 2e-41
15O57561:RL18A_SALSA 60S ribosomal protein L18a - Salmo salar (Atl... 168 3e-41
16P05732:RL20_SCHPO 60S ribosomal protein L20 - Schizosaccharomyce... 164 3e-40
17Q6M157:RLX_METMP 50S ribosomal protein LX - Methanococcus maripa... 32 3.1
18Q494D6:HIS6_BLOPB Imidazole glycerol phosphate synthase subunit ... 32 3.1
19P25805:CYSP_PLAFA Trophozoite cysteine proteinase precursor - Pl... 32 4.0
20P60810:PRSA2_LACJO Foldase protein prsA 2 precursor - Lactobacil... 31 5.2
21Q4PFD9:PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase... 31 6.9
22O51798:MMLH_RALEJ Probable 4-methylmuconolactone transporter - R... 30 8.9
23P15283:MBHS_RHOCA Uptake hydrogenase small subunit precursor - R... 30 9.0

>Q943F3:RL18A_ORYSJ 60S ribosomal protein L18a - Oryza sativa subsp. japonica (Rice)|
          Length = 178
 Score =  347 bits (889), Expect = 4e-95
 Identities = 166/178 (93%), Positives = 171/178 (96%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           M AFRFHQYQVVGR LPTP DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQI 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTATV+FKLCKRDNTKQFH S IKFPLVY+KVRPPTRKLKTT+KA+RPNLFM
Sbjct: 121 PCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178



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>P51418:R18A2_ARATH 60S ribosomal protein L18a-2 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 178

 Score =  337 bits (864), Expect = 3e-92
 Identities = 162/178 (91%), Positives = 170/178 (95%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           M AFRFHQYQVVGRALPT  D QPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1   MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEI+EKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR 
Sbjct: 61  LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTATV  KLCKR++TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178



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>Q9LUD4:R18A3_ARATH 60S ribosomal protein L18a-3 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 178

 Score =  329 bits (844), Expect = 7e-90
 Identities = 158/178 (88%), Positives = 165/178 (92%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           M  FRFHQYQVVGRALPT  DE PKIYRMKLW  NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1   MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTATV  KLCKR+ TKQFHNSKIKFPLV++KVRPP+RKLKTTYKA++PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178



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>Q9ATF5:RL18A_CASSA 60S ribosomal protein L18a - Castanea sativa (Sweet chestnut)|
          Length = 178

 Score =  328 bits (842), Expect = 1e-89
 Identities = 157/178 (88%), Positives = 166/178 (93%)
 Frame = +3

Query: 69  MVAFRFHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 248
           MV FRFHQYQVVGR LP+  DE PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1   MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 249 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 428
           LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRF 120

Query: 429 PCIQIIKTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLFM 602
           PCIQIIKTAT+  KLCKR+++KQFHNSKIKFPLV +K+RPP+RKLKT YKA+RPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178



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>Q02543:RL18A_HUMAN 60S ribosomal protein L18a - Homo sapiens (Human)|
          Length = 176

 Score =  187 bits (476), Expect = 3e-47
 Identities = 88/170 (51%), Positives = 121/170 (71%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175



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>Q3T003:RL18A_BOVIN 60S ribosomal protein L18a - Bos taurus (Bovine)|
          Length = 176

 Score =  187 bits (476), Expect = 3e-47
 Identities = 88/170 (51%), Positives = 121/170 (71%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175



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>P62718:RL18A_RAT 60S ribosomal protein L18a - Rattus norvegicus (Rat)|
          Length = 176

 Score =  187 bits (474), Expect = 6e-47
 Identities = 88/170 (51%), Positives = 121/170 (71%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175



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>P62717:RL18A_MOUSE 60S ribosomal protein L18a - Mus musculus (Mouse)|
          Length = 176

 Score =  187 bits (474), Expect = 6e-47
 Identities = 88/170 (51%), Positives = 121/170 (71%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LPTP    P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++   ++F
Sbjct: 9   EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T  GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175



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>Q7ZWJ4:RL18A_DANRE 60S ribosomal protein L18a - Danio rerio (Zebrafish) (Brachydanio|
           rerio)
          Length = 176

 Score =  181 bits (458), Expect = 4e-45
 Identities = 84/170 (49%), Positives = 121/170 (71%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KK++G+++    +F
Sbjct: 9   EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVF 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  +KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RPN F
Sbjct: 129 VQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175



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>Q8WQI7:RL18A_SPOFR 60S ribosomal protein L18a - Spodoptera frugiperda (Fall armyworm)|
          Length = 177

 Score =  180 bits (457), Expect = 5e-45
 Identities = 82/170 (48%), Positives = 120/170 (70%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+V+GR LP+  + +P +Y+M++++ +++ AKS+FWYFLR+LKK KK+ G++++I EI 
Sbjct: 9   EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIP 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK+P  IKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R+  IQIIK
Sbjct: 69  EKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFHNS I+FPL     R    K   T+   RP+ +
Sbjct: 129 VEVIKASACRRPQVKQFHNSTIRFPL---PKRVHHHKRLNTFAYKRPSTY 175



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>O44480:RL18A_CAEEL 60S ribosomal protein L18a - Caenorhabditis elegans|
          Length = 180

 Score =  180 bits (456), Expect = 7e-45
 Identities = 84/169 (49%), Positives = 121/169 (71%)
 Frame = +3

Query: 87  HQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 266
           ++Y VVGR +PT  +    I++M+++ATN V AKS+FWYF+  L++VKK+NG++L+I ++
Sbjct: 11  NEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQV 70

Query: 267 FEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 446
           FEKNP T+KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++  I I+
Sbjct: 71  FEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHIL 130

Query: 447 KTATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPN 593
           K  TV  +  KR   K FH++KI+FPL +   R   RK  + +   R N
Sbjct: 131 KVQTVKAEDTKRAGIKMFHDAKIRFPLPH---RVTKRKNLSVFTTARQN 176



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>P41093:RL18A_DROME 60S ribosomal protein L18a - Drosophila melanogaster (Fruit fly)|
          Length = 177

 Score =  177 bits (448), Expect = 6e-44
 Identities = 81/158 (51%), Positives = 116/158 (73%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LP+  + Q  +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++
Sbjct: 9   EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVY 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           E +P  IKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+  IQIIK
Sbjct: 69  ETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKL 563
             ++     +R + KQFH+SKIKFPLV +      RKL
Sbjct: 129 VDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166



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>Q90YU9:RL18A_ICTPU 60S ribosomal protein L18a - Ictalurus punctatus (Channel catfish)|
          Length = 176

 Score =  175 bits (444), Expect = 2e-43
 Identities = 82/170 (48%), Positives = 118/170 (69%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ +    + 
Sbjct: 9   EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           E++P  +KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+  IQI+K
Sbjct: 69  EQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+ K  +   RP  F
Sbjct: 129 VQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175



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>P0C2I0:RL20_YEAST 60S ribosomal protein L20 - Saccharomyces cerevisiae (Baker's|
           yeast)
          Length = 172

 Score =  169 bits (427), Expect = 2e-41
 Identities = 82/173 (47%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
 Frame = +3

Query: 84  FHQYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 263
           F +YQV+GR LPT    +PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+
Sbjct: 4   FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63

Query: 264 IFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 443
           I E +PT +KN+G+W+RY SR+G HNMYKE RD +   AVE +Y +MA+RHR R   I I
Sbjct: 64  INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123

Query: 444 IKTATVNFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
           +K A +      KR   KQF    +KFPL ++      +K   T+   RP+ F
Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-----VQKSTKTFSYKRPSTF 171



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>O57561:RL18A_SALSA 60S ribosomal protein L18a - Salmo salar (Atlantic salmon)|
          Length = 176

 Score =  168 bits (425), Expect = 3e-41
 Identities = 79/170 (46%), Positives = 114/170 (67%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +Y+VVGR LP+  +  P +YRM+++A N V AKS+FWYF+ +L+K+KK+NG+ +    + 
Sbjct: 9   EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVH 68

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           EK P  +KN+G+WLR  SR+G HNMY+EYRD T + AV Q Y +M +RHR R+  I I+K
Sbjct: 69  EKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAVTQCYRDMGARHRARAHSIHIMK 128

Query: 450 TATVNFKLCKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              +    C+R   KQFH+SKIKFPL ++ +R   R+    +   RPN F
Sbjct: 129 VQEIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHNPRFTTKRPNTF 175



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>P05732:RL20_SCHPO 60S ribosomal protein L20 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 176

 Score =  164 bits (416), Expect = 3e-40
 Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 1/171 (0%)
 Frame = +3

Query: 90  QYQVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 269
           +YQVVGR +PT  +  PK++RM+L+A NE  AKS++WYFL+ + KVKK+ G+++AINEI 
Sbjct: 5   EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 64

Query: 270 EKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIK 449
           E  P   K +GIW+RY SR+G HNMYKE+RDTT  GAVE MY +MA+RHR R   I+I+K
Sbjct: 65  EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 124

Query: 450 TATVNFKL-CKRDNTKQFHNSKIKFPLVYQKVRPPTRKLKTTYKATRPNLF 599
              V  K   +R+  KQ  N  +KFPL +++        K  +   RP+ F
Sbjct: 125 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175



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>Q6M157:RLX_METMP 50S ribosomal protein LX - Methanococcus maripaludis|
          Length = 76

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +3

Query: 348 KEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATVN 464
           KEY     N A+E MY+E+ S+H V+   I++++ + ++
Sbjct: 22  KEYNVLKENDALETMYSEIGSKHAVKRANIKVVEISEIS 60



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>Q494D6:HIS6_BLOPB Imidazole glycerol phosphate synthase subunit hisF - Blochmannia|
           pennsylvanicus (strain BPEN)
          Length = 258

 Score = 32.0 bits (71), Expect = 3.1
 Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
 Frame = +3

Query: 96  QVVGRALPTPGDEQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFE- 272
           Q V  ++ T  + Q KIY++K +  +  RAK   W  L  +KKV++     + +N + + 
Sbjct: 123 QCVVVSIDTWHNPQKKIYQVKCYTGDSTRAKITTWQTLDWVKKVQEYGAGEIVLNMMNQD 182

Query: 273 --KNPTTI-------KNYGIWLRYQSRTG-YHNMYKEYRDTTLNGAV--EQMYTEMASRH 416
             KN   +       K+  + L      G Y +  + +RD  ++GA+     + ++   H
Sbjct: 183 GMKNGYDLDQLRNIRKHCQVPLIASGGAGTYQHFLEAFRDADVDGALAASVFHNQIIDIH 242

Query: 417 RVRSPCIQIIKTATVNFKLC 476
           +++    Q +    +  +LC
Sbjct: 243 KLK----QFLNKEGIKIRLC 258



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>P25805:CYSP_PLAFA Trophozoite cysteine proteinase precursor - Plasmodium falciparum|
          Length = 569

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 18/67 (26%), Positives = 34/67 (50%)
 Frame = +3

Query: 171 NEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYK 350
           N ++  SKF+ F+++  KV K+  + +   EIF+ N  +IKN+    +        N + 
Sbjct: 217 NNIKYASKFFKFMKEHNKVYKNIDEQMRKFEIFKINYISIKNHNKLNKNAMYKKKVNQFS 276

Query: 351 EYRDTTL 371
           +Y +  L
Sbjct: 277 DYSEEEL 283



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>P60810:PRSA2_LACJO Foldase protein prsA 2 precursor - Lactobacillus johnsonii|
          Length = 298

 Score = 31.2 bits (69), Expect = 5.2
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
 Frame = +3

Query: 180 RAKSKFWYFLRKLKKVKKSNGQMLAINEIF------EKNPTTIKNYGIWLRYQSRTGYHN 341
           R  S+F  FL++    KKS  QM+ +N +       +  PTT +    W  YQ +    +
Sbjct: 89  RYGSQFDSFLKENSYTKKSFKQMIELNHLSKIALKKQMKPTTSQLKEEWKDYQPKITVQH 148

Query: 342 MYKEYRDTTLNGAVEQM-----YTEMASRHRVRS 428
           +    RDT  N  +E++     +  +AS++ V S
Sbjct: 149 ISTTSRDTA-NTVIEKLNNGESFASLASKYSVDS 181



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>Q4PFD9:PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 - Ustilago|
           maydis (Smut fungus)
          Length = 1156

 Score = 30.8 bits (68), Expect = 6.9
 Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
 Frame = +2

Query: 245 DARHQRDL*EEPNHHQELWHLAALPEQDWVPQHVQGIP*H--HTEWCRGADVH*DGLSPP 418
           D RH RD   E +       + A P  D    HV+G P       W  GA        P 
Sbjct: 73  DRRHDRDRNRERDRRDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWDEGAPT-----PPT 127

Query: 419 CEIPLHSDHQDRDCQLQAMQERQYQAVPQLQD*VPPCVP 535
              P+H     R      +  R   A P +    PP +P
Sbjct: 128 AAAPVHVSDPTRSSLNTQLPSRPIVAPPGMAPGPPPSLP 166



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>O51798:MMLH_RALEJ Probable 4-methylmuconolactone transporter - Ralstonia eutropha|
           (strain JMP134) (Alcaligenes eutrophus)
          Length = 428

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 271 SKISLMASIWPLLFFTFFSFLRKYQNLLLART 176
           ++I ++A IW  LF     F + YQ LL+ART
Sbjct: 79  ARILVLAIIWFTLFGVLAGFAQSYQQLLIART 110



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>P15283:MBHS_RHOCA Uptake hydrogenase small subunit precursor - Rhodobacter capsulatus|
           (Rhodopseudomonas capsulata)
          Length = 358

 Score = 30.4 bits (67), Expect = 9.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 384 PRHHSVWCHGIPCTCC 337
           PR   VW HG+ CTCC
Sbjct: 50  PRTPVVWVHGLECTCC 65


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 145,542,316
Number of extensions: 3164033
Number of successful extensions: 8722
Number of sequences better than 10.0: 23
Number of HSP's gapped: 8706
Number of HSP's successfully gapped: 23
Length of query: 278
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 166
Effective length of database: 69,965,399
Effective search space: 11614256234
Effective search space used: 11614256234
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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