ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf26b14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA sequence Length = 770 Score = 287 bits (145), Expect = 5e-74 Identities = 262/301 (87%) Strand = Plus / Plus Query: 642 agtcactcactgactgttgtggtggtgatggaacgacagctagggccattgtcaaggcct 701 |||||||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 25 agtcactcaccgactgctgtggtggtgatgggacgaccgcaagggccatcgtcaaggcct 84 Query: 702 tcccgcatatcaagtgtaatgtgttggaccttccgaaggtgatcgagaaagttccaagtg 761 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 85 tcccgcatatcaagtgcaatgtgttggaccttccaaaggtgatcgagaaagtcccaagtg 144 Query: 762 atggtatcgttaactatgtcgctggtgacctattccatgctattccacctgctcaagttc 821 ||||| | ||||||||||||||||||||||| |||||| | | ||||| ||||| | Sbjct: 145 atggtgttgttaactatgtcgctggtgacctcttccataccgtcccaccagctcaggccg 204 Query: 822 tcatgcttaagcttgttctgcacttctggagtgatgaagattgcatcaatattctggctc 881 ||||||| ||||||||||| ||||||||||| || || ||||||||||| || || |||| Sbjct: 205 tcatgctcaagcttgttctacacttctggagcgacgaggattgcatcaagatcctcgctc 264 Query: 882 aatgcaagaaggccattccgtcacgcgaaatggggggaaaggttattgtcatagatatag 941 |||||||||||||||| || || || |||||||| ||||| || || ||||||| |||| Sbjct: 265 aatgcaagaaggccataccttcccgagaaatgggaggaaaagtgatcatcatagacatag 324 Query: 942 t 942 | Sbjct: 325 t 325 Score = 143 bits (72), Expect = 2e-30 Identities = 126/144 (87%) Strand = Plus / Plus Query: 987 tggatatgctcatgttggtatgtacaagaggacgtcaacgagatgaaaatgactggagca 1046 |||| ||||| ||||| ||||||| |||||||| ||||| |||||||| || ||||||| Sbjct: 370 tggacatgctgatgttcatatgtaccagaggacggcaacgggatgaaaaggagtggagca 429 Query: 1047 caatctttacaaaagcaggatttagcggctataaaattgtcaagaaactgggacctcgag 1106 | |||||||| |||||||| |||||| |||||| |||||||||||||| || | ||||| Sbjct: 430 cgatctttacgaaagcagggtttagcaactataagattgtcaagaaacttggccatcgag 489 Query: 1107 gtgtcatcgaggtctatccataag 1130 |||||||||||||||||||||||| Sbjct: 490 gtgtcatcgaggtctatccataag 513
>emb|CT834734.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120J19, full insert sequence Length = 1398 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 108 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 167 Query: 152 tgcgccgtccagctcggcatccctactgcgattcatcgactcggcggca 200 ||||||||| ||||||||||||| || || || || || |||||||||| Sbjct: 168 tgcgccgtcaagctcggcatccccacagccatccaccgcctcggcggca 216
>emb|CT831313.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120C08, full insert sequence Length = 1394 Score = 81.8 bits (41), Expect = 6e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 108 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 167 Query: 152 tgcgccgtccagctcggcatccctactgcgattcatcgactcggcggca 200 ||||||||| ||||||||||||| || || || || || |||||||||| Sbjct: 168 tgcgccgtcaagctcggcatccccacagccatccaccgcctcggcggca 216
>ref|NM_001074279.1| Oryza sativa (japonica cultivar-group) Os11g0306300 (Os11g0306300) mRNA, complete cds Length = 1300 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 152 tgcgccgtccagctcggcatccc 174 ||||||||| ||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccc 200
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0005P21, complete sequence Length = 147381 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438 Query: 152 tgcgccgtccagctcggcatccc 174 ||||||||| ||||||||||||| Sbjct: 131437 tgcgccgtcaagctcggcatccc 131415 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 119539 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 119598 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 119599 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 119655 Score = 71.9 bits (36), Expect = 6e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 76 cgatgcccaactgattcaggcgcaggctgacctatggcgccacagcctatgccacctcac 135 ||||||| | ||||| || || ||||| ||||| |||||||||||||| | | ||||||| Sbjct: 63230 cgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcac 63289 Query: 136 ggccatggcactcaggtgcgccgtccagctcggcatccctactgcgattcatcgactcgg 195 | |||||| ||| | ||||||||| ||||||||||||| || |||| ||| | ||||| Sbjct: 63290 gtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcgg 63349 Query: 196 cggc 199 |||| Sbjct: 63350 cggc 63353 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1060 agcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgaggt 1119 ||||||||| || | |||||| ||||| |||||||| || |||||| |||| ||||||| Sbjct: 64409 agcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggt 64468 Query: 1120 ctatc 1124 ||||| Sbjct: 64469 ctatc 64473 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 118945 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 119004 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 119005 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 119049 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 123093 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 123152 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 123153 gtctatccctaagattg 123169
>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence Length = 128418 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187 Query: 152 tgcgccgtccagctcggcatccc 174 ||||||||| ||||||||||||| Sbjct: 17186 tgcgccgtcaagctcggcatccc 17164 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 5288 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 5347 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 5348 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 5404 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 4694 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 4753 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 4754 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 4798 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 8842 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 8901 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 8902 gtctatccctaagattg 8918
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350 Query: 152 tgcgccgtccagctcggcatccc 174 ||||||||| ||||||||||||| Sbjct: 11482351 tgcgccgtcaagctcggcatccc 11482373 Score = 75.8 bits (38), Expect = 4e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 98 caggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcgcc 157 ||||| |||||||||||||||||| | | | |||||||||||||||| ||| | |||||| Sbjct: 7138986 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 7138927 Query: 158 gtccagctcggcatccctactgcgattcatcgactcggcggc 199 | | ||||||||||||| || || || || || ||||||||| Sbjct: 7138926 gccaagctcggcatccccaccgccatccaccgcctcggcggc 7138885 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Minus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 11494249 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 11494190 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 11494189 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 11494133 Score = 71.9 bits (36), Expect = 6e-09 Identities = 102/124 (82%) Strand = Plus / Minus Query: 76 cgatgcccaactgattcaggcgcaggctgacctatggcgccacagcctatgccacctcac 135 ||||||| | ||||| || || ||||| ||||| |||||||||||||| | | ||||||| Sbjct: 11550558 cgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcac 11550499 Query: 136 ggccatggcactcaggtgcgccgtccagctcggcatccctactgcgattcatcgactcgg 195 | |||||| ||| | ||||||||| ||||||||||||| || |||| ||| | ||||| Sbjct: 11550498 gtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcgg 11550439 Query: 196 cggc 199 |||| Sbjct: 11550438 cggc 11550435 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| ||||| |||||||||||||| | | | ||||| ||||||| || |||| Sbjct: 11331643 gcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatggcgttccagtgc 11331584 Query: 155 gccgtccagctcggcatccc 174 |||||| ||||||||||||| Sbjct: 11331583 gccgtcaagctcggcatccc 11331564 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Minus Query: 96 cgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcg 155 ||||||| || || |||||||||| ||| | | ||||||| ||||| | ||| |||||| Sbjct: 11303034 cgcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcg 11302975 Query: 156 ccgtccagctcggcatccc 174 ||||||| ||||||||||| Sbjct: 11302974 ccgtccacctcggcatccc 11302956 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Minus Query: 1060 agcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgaggt 1119 ||||||||| || | |||||| ||||| |||||||| || |||||| |||| ||||||| Sbjct: 11549379 agcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggt 11549320 Query: 1120 ctatc 1124 ||||| Sbjct: 11549319 ctatc 11549315 Score = 48.1 bits (24), Expect = 0.084 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1082 attgtcaagaaactgggacctcgaggtgtcatcgaggtctatcc 1125 ||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 11294574 attgtgaagaaattgggacctcggtgtgtcattgaggtctatcc 11294531 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Minus Query: 701 ttcccgcatatcaagtgtaatgtgttggaccttccgaaggtgatcga 747 |||||||| |||||||| | ||| ||||||| |||||||||||||| Sbjct: 7138341 ttcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcga 7138295 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Minus Query: 1082 attgtcaagaaactgggacctcgaggtgtcatcgaggtctatccata 1128 ||||| |||||||||||| ||||||| ||| | |||||||| ||||| Sbjct: 11353932 attgtgaagaaactgggagctcgaggcgtctttgaggtctacccata 11353886 Score = 42.1 bits (21), Expect = 5.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 770 gttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 ||||||||||| || |||||| | || |||||| | ||||||||||||| Sbjct: 7138269 gttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaag 7138221 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Minus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 11490695 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 11490636 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 11490635 gtctatccctaagattg 11490619 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Minus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 11494843 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 11494784 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 11494783 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 11494739 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| ||||||||| ||||||||||||| Sbjct: 19031097 ccatggcgctcaagtgcgccgtggagctcggcatccc 19031061
>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full insert sequence Length = 1300 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| |||| |||||||||||||| | | ||||||| ||||||| ||| || Sbjct: 118 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 177 Query: 152 tgcgccgtccagctcggcatccc 174 ||||||||| ||||||||||||| Sbjct: 178 tgcgccgtcaagctcggcatccc 200
>ref|NM_001074098.1| Oryza sativa (japonica cultivar-group) Os11g0235500 (Os11g0235500) mRNA, complete cds Length = 1137 Score = 75.8 bits (38), Expect = 4e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 98 caggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcgcc 157 ||||| |||||||||||||||||| | | | |||||||||||||||| ||| | |||||| Sbjct: 58 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 117 Query: 158 gtccagctcggcatccctactgcgattcatcgactcggcggc 199 | | ||||||||||||| || || || || || ||||||||| Sbjct: 118 gccaagctcggcatccccaccgccatccaccgcctcggcggc 159 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Plus Query: 701 ttcccgcatatcaagtgtaatgtgttggaccttccgaaggtgatcga 747 |||||||| |||||||| | ||| ||||||| |||||||||||||| Sbjct: 703 ttcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcga 749 Score = 42.1 bits (21), Expect = 5.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 770 gttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 ||||||||||| || |||||| | || |||||| | ||||||||||||| Sbjct: 775 gttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaag 823
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 75.8 bits (38), Expect = 4e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 98 caggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcgcc 157 ||||| |||||||||||||||||| | | | |||||||||||||||| ||| | |||||| Sbjct: 43569 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 43628 Query: 158 gtccagctcggcatccctactgcgattcatcgactcggcggc 199 | | ||||||||||||| || || || || || ||||||||| Sbjct: 43629 gccaagctcggcatccccaccgccatccaccgcctcggcggc 43670 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Plus Query: 701 ttcccgcatatcaagtgtaatgtgttggaccttccgaaggtgatcga 747 |||||||| |||||||| | ||| ||||||| |||||||||||||| Sbjct: 44214 ttcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcga 44260 Score = 42.1 bits (21), Expect = 5.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 770 gttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 ||||||||||| || |||||| | || |||||| | ||||||||||||| Sbjct: 44286 gttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaag 44334
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 75.8 bits (38), Expect = 4e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 98 caggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcgcc 157 ||||| |||||||||||||||||| | | | |||||||||||||||| ||| | |||||| Sbjct: 52206 caggccgacctatggcgccacagcttctcctacctcacggccatggcgctccgctgcgcc 52147 Query: 158 gtccagctcggcatccctactgcgattcatcgactcggcggc 199 | | ||||||||||||| || || || || || ||||||||| Sbjct: 52146 gccaagctcggcatccccaccgccatccaccgcctcggcggc 52105 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Minus Query: 701 ttcccgcatatcaagtgtaatgtgttggaccttccgaaggtgatcga 747 |||||||| |||||||| | ||| ||||||| |||||||||||||| Sbjct: 51561 ttcccgcacatcaagtgcacggtgctggacctcccgaaggtgatcga 51515 Score = 42.1 bits (21), Expect = 5.2 Identities = 42/49 (85%) Strand = Plus / Minus Query: 770 gttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 ||||||||||| || |||||| | || |||||| | ||||||||||||| Sbjct: 51489 gttaactatgttgcaggtgacatgtttcatgctgtcccacctgctcaag 51441
>emb|CT831581.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA031O13, full insert sequence Length = 1498 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 703 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 762 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 763 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 819 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 109 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 168 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 169 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 213 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 1090 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 1149 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 1150 gtctatccctaagattg 1166
>ref|NM_001074280.1| Oryza sativa (japonica cultivar-group) Os11g0306400 (Os11g0306400) mRNA, complete cds Length = 1362 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 699 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 758 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 759 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 815 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 105 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 164 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 165 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 209 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 1086 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 1145 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 1146 gtctatccctaagattg 1162
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds Length = 1373 Score = 73.8 bits (37), Expect = 1e-09 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 |||||||| ||||||| ||| |||||||||||||||||||| | |||||||| |||||| Sbjct: 1068 aaagcagggtttagcgactacaaaattgtcaagaaactgggtgcacgaggtgttatcgag 1127 Query: 1118 gtcta 1122 ||||| Sbjct: 1128 gtcta 1132 Score = 60.0 bits (30), Expect = 2e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 98 caggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcgcc 157 ||||| ||||| |||||||||| ||| | | |||||||| |||||| ||| | |||||| Sbjct: 90 caggccgacctgtggcgccacaccctttactacctcacgtccatggggctccgctgcgcc 149 Query: 158 gtccagctcggcatccctactgcgat 183 ||| ||||||||||||| || ||||| Sbjct: 150 gtcaagctcggcatcccgacggcgat 175
>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full insert sequence Length = 1362 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 699 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 758 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 759 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 815 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 105 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 164 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 165 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 209 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 1086 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 1145 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 1146 gtctatccctaagattg 1162
>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full insert sequence Length = 1264 Score = 73.8 bits (37), Expect = 1e-09 Identities = 97/117 (82%) Strand = Plus / Plus Query: 674 acgacagctagggccattgtcaaggccttcccgcatatcaagtgtaatgtgttggacctt 733 ||||| || |||||||| | |||||||| ||| ||| ||||||| | |||| |||||||| Sbjct: 704 acgacggcgagggccatcgccaaggcctaccctcatgtcaagtgcactgtgctggacctt 763 Query: 734 ccgaaggtgatcgagaaagttccaagtgatggtatcgttaactatgtcgctggtgac 790 || ||||||||||| || | || | ||||||| ||||||||||||| || |||||| Sbjct: 764 cccaaggtgatcgacaaggcgcccaatgatggtgtcgttaactatgttgcaggtgac 820 Score = 42.1 bits (21), Expect = 5.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| || || |||||||||||||| | | ||||||| ||| || |||| | ||| Sbjct: 110 gcgcaggccgatctgtggcgccacagcctctactacctcacctccacgggactccgctgc 169 Query: 155 gccgtccagctcggcatccctactgcgattcatcgactcggcggc 199 ||| || |||| |||||||| || || || || || ||||||||| Sbjct: 170 gccatcaagctgggcatccccaccgccatccaccgcctcggcggc 214 Score = 42.1 bits (21), Expect = 5.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 1058 aaagcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgag 1117 ||||||||||| | | |||||| ||||| |||| || ||| ||||||| || ||||| Sbjct: 1091 aaagcaggattcaatgactataagattgtgaagatgcttggagctcgaggagttttcgag 1150 Query: 1118 gtctatccataagattg 1134 |||||||| |||||||| Sbjct: 1151 gtctatccctaagattg 1167
>dbj|AK240736.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043034A04, full insert sequence Length = 1528 Score = 71.9 bits (36), Expect = 6e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 76 cgatgcccaactgattcaggcgcaggctgacctatggcgccacagcctatgccacctcac 135 ||||||| | ||||| || || ||||| ||||| |||||||||||||| | | ||||||| Sbjct: 115 cgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcac 174 Query: 136 ggccatggcactcaggtgcgccgtccagctcggcatccctactgcgattcatcgactcgg 195 | |||||| ||| | ||||||||| ||||||||||||| || |||| ||| | ||||| Sbjct: 175 gtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcgg 234 Query: 196 cggc 199 |||| Sbjct: 235 cggc 238 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1060 agcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgaggt 1119 ||||||||| || | |||||| ||||| |||||||| || |||||| |||| ||||||| Sbjct: 1117 agcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggt 1176 Query: 1120 ctatc 1124 ||||| Sbjct: 1177 ctatc 1181
>ref|NM_001074281.1| Oryza sativa (japonica cultivar-group) Os11g0307300 (Os11g0307300) mRNA, complete cds Length = 1107 Score = 71.9 bits (36), Expect = 6e-09 Identities = 102/124 (82%) Strand = Plus / Plus Query: 76 cgatgcccaactgattcaggcgcaggctgacctatggcgccacagcctatgccacctcac 135 ||||||| | ||||| || || ||||| ||||| |||||||||||||| | | ||||||| Sbjct: 36 cgatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcac 95 Query: 136 ggccatggcactcaggtgcgccgtccagctcggcatccctactgcgattcatcgactcgg 195 | |||||| ||| | ||||||||| ||||||||||||| || |||| ||| | ||||| Sbjct: 96 gtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctcgg 155 Query: 196 cggc 199 |||| Sbjct: 156 cggc 159 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1060 agcaggatttagcggctataaaattgtcaagaaactgggacctcgaggtgtcatcgaggt 1119 ||||||||| || | |||||| ||||| |||||||| || |||||| |||| ||||||| Sbjct: 1038 agcaggattcagtgactataagattgtgaagaaacttggtgctcgagctgtcttcgaggt 1097 Query: 1120 ctatc 1124 ||||| Sbjct: 1098 ctatc 1102
>ref|NM_001074274.1| Oryza sativa (japonica cultivar-group) Os11g0303600 (Os11g0303600) mRNA, complete cds Length = 1253 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| ||||| |||||||||||||| | | | ||||| ||||||| || |||| Sbjct: 104 gcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatggcgttccagtgc 163 Query: 155 gccgtccagctcggcatccc 174 |||||| ||||||||||||| Sbjct: 164 gccgtcaagctcggcatccc 183 Score = 52.0 bits (26), Expect = 0.005 Identities = 86/106 (81%) Strand = Plus / Plus Query: 759 gtgatggtatcgttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 |||||||| | || |||||||| || |||||| | |||| || || ||||||||||||| Sbjct: 801 gtgatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaag 860 Query: 819 ttctcatgcttaagcttgttctgcacttctggagtgatgaagattg 864 | ||||||| |||||||| || ||| ||||||||| || ||||| Sbjct: 861 ctgtcatgctcaagcttgtgcttcaccactggagtgacgaggattg 906
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| ||||| |||||||||||||| | | | ||||| ||||||| || |||| Sbjct: 118001 gcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatggcgttccagtgc 117942 Query: 155 gccgtccagctcggcatccc 174 |||||| ||||||||||||| Sbjct: 117941 gccgtcaagctcggcatccc 117922 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Minus Query: 96 cgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcg 155 ||||||| || || |||||||||| ||| | | ||||||| ||||| | ||| |||||| Sbjct: 89392 cgcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcg 89333 Query: 156 ccgtccagctcggcatccc 174 ||||||| ||||||||||| Sbjct: 89332 ccgtccacctcggcatccc 89314 Score = 48.1 bits (24), Expect = 0.084 Identities = 39/44 (88%) Strand = Plus / Minus Query: 1082 attgtcaagaaactgggacctcgaggtgtcatcgaggtctatcc 1125 ||||| |||||| |||||||||| ||||||| ||||||||||| Sbjct: 80932 attgtgaagaaattgggacctcggtgtgtcattgaggtctatcc 80889 Score = 46.1 bits (23), Expect = 0.33 Identities = 41/47 (87%) Strand = Plus / Minus Query: 1082 attgtcaagaaactgggacctcgaggtgtcatcgaggtctatccata 1128 ||||| |||||||||||| ||||||| ||| | |||||||| ||||| Sbjct: 140290 attgtgaagaaactgggagctcgaggcgtctttgaggtctacccata 140244
>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full insert sequence Length = 1262 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 95 gcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgc 154 |||||||| ||||| |||||||||||||| | | | ||||| ||||||| || |||| Sbjct: 104 gcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccatggcgttccagtgc 163 Query: 155 gccgtccagctcggcatccc 174 |||||| ||||||||||||| Sbjct: 164 gccgtcaagctcggcatccc 183 Score = 52.0 bits (26), Expect = 0.005 Identities = 86/106 (81%) Strand = Plus / Plus Query: 759 gtgatggtatcgttaactatgtcgctggtgacctattccatgctattccacctgctcaag 818 |||||||| | || |||||||| || |||||| | |||| || || ||||||||||||| Sbjct: 801 gtgatggtgtggtgaactatgtagcgggtgacatgttccgcgccatcccacctgctcaag 860 Query: 819 ttctcatgcttaagcttgttctgcacttctggagtgatgaagattg 864 | ||||||| |||||||| || ||| ||||||||| || ||||| Sbjct: 861 ctgtcatgctcaagcttgtgcttcaccactggagtgacgaggattg 906
>ref|NM_001074271.1| Oryza sativa (japonica cultivar-group) Os11g0303300 (Os11g0303300) mRNA, complete cds Length = 936 Score = 54.0 bits (27), Expect = 0.001 Identities = 66/79 (83%) Strand = Plus / Plus Query: 96 cgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcaggtgcg 155 ||||||| || || |||||||||| ||| | | ||||||| ||||| | ||| |||||| Sbjct: 188 cgcaggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcg 247 Query: 156 ccgtccagctcggcatccc 174 ||||||| ||||||||||| Sbjct: 248 ccgtccacctcggcatccc 266
>ref|NM_001067621.1| Oryza sativa (japonica cultivar-group) Os08g0169300 (Os08g0169300) mRNA, complete cds Length = 1029 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 683 agggccattgtcaaggccttcccgcatatcaagtg 717 ||||||||||||||||||||||| || |||||||| Sbjct: 586 agggccattgtcaaggccttcccacacatcaagtg 620
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 683 agggccattgtcaaggccttcccgcatatcaagtg 717 ||||||||||||||||||||||| || |||||||| Sbjct: 4047573 agggccattgtcaaggccttcccacacatcaagtg 4047607 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 |||| ||||||||||||||||| |||| |||||||| Sbjct: 22272617 ccatagcactcaggtgcgccgtagagcttggcatccc 22272581
>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0462E11 Length = 166115 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 683 agggccattgtcaaggccttcccgcatatcaagtg 717 ||||||||||||||||||||||| || |||||||| Sbjct: 134870 agggccattgtcaaggccttcccacacatcaagtg 134904
>dbj|AP005501.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0458D06 Length = 166038 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 683 agggccattgtcaaggccttcccgcatatcaagtg 717 ||||||||||||||||||||||| || |||||||| Sbjct: 40686 agggccattgtcaaggccttcccacacatcaagtg 40720
>gb|AY107519.1| Zea mays PCO078033 mRNA sequence Length = 1299 Score = 50.1 bits (25), Expect = 0.021 Identities = 55/65 (84%) Strand = Plus / Plus Query: 92 caggcgcaggctgacctatggcgccacagcctatgccacctcacggccatggcactcagg 151 ||||||||||| ||||| |||||||||||||| | | |||| || ||||||| |||| | Sbjct: 84 caggcgcaggccgacctgtggcgccacagcctctactacctgacatccatggcgctcaag 143 Query: 152 tgcgc 156 ||||| Sbjct: 144 tgcgc 148 Score = 50.1 bits (25), Expect = 0.021 Identities = 40/45 (88%) Strand = Plus / Plus Query: 1083 ttgtcaagaaactgggacctcgaggtgtcatcgaggtctatccat 1127 ||||||||||| | ||| |||| ||||||||||||||||| |||| Sbjct: 1063 ttgtcaagaaaatcggagctcgtggtgtcatcgaggtctacccat 1107
>gb|AY103669.1| Zea mays PCO073521 mRNA sequence Length = 1503 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 108 tatggcgccacagcctatgccacctcacggccatggcactcaggtgcgccgtccagctcg 167 ||||||| | |||||| | | |||||||| || || |||| ||||||||||| |||| | Sbjct: 91 tatggcggctcagcctctcctacctcacgcccctgtcactgaggtgcgccgtggagcttg 150 Query: 168 gcatccctactgcgat 183 |||||||||| ||||| Sbjct: 151 gcatccctacggcgat 166
>gb|AF033496.1|AF033496 Zea mays herbicide safener binding protein (SBP1) mRNA, complete cds Length = 1438 Score = 48.1 bits (24), Expect = 0.084 Identities = 63/76 (82%) Strand = Plus / Plus Query: 108 tatggcgccacagcctatgccacctcacggccatggcactcaggtgcgccgtccagctcg 167 ||||||| | |||||| | | |||||||| || || |||| ||||||||||| |||| | Sbjct: 89 tatggcggctcagcctctcctacctcacgcccctgtcactgaggtgcgccgtggagcttg 148 Query: 168 gcatccctactgcgat 183 |||||||||| ||||| Sbjct: 149 gcatccctacggcgat 164
>emb|X68127.1|MARIREDM2 M.auratus mRNA for ribonucleotide reductase M2 subunit Length = 3481 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 862 ttgcatcaatattctggctcaa 883 |||||||||||||||||||||| Sbjct: 876 ttgcatcaatattctggctcaa 897
>ref|NM_001025740.1| Rattus norvegicus ribonucleotide reductase M2 (mapped) (Rrm2_mapped), mRNA gb|BC099082.1| Rattus norvegicus ribonucleotide reductase M2 (mapped), mRNA (cDNA clone MGC:116120 IMAGE:7443729), complete cds Length = 2563 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 862 ttgcatcaatattctggctcaa 883 |||||||||||||||||||||| Sbjct: 773 ttgcatcaatattctggctcaa 794
>ref|NM_001074566.1| Oryza sativa (japonica cultivar-group) Os11g0539500 (Os11g0539500) mRNA, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| ||||||||| ||||||||||||| Sbjct: 101 ccatggcgctcaagtgcgccgtggagctcggcatccc 137
>gb|AC118193.9| Mus musculus chromosome 8, clone RP23-241A10, complete sequence Length = 222682 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1249 agtataagtagctaagtgata 1269 ||||||||||||||||||||| Sbjct: 10259 agtataagtagctaagtgata 10279
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| ||||||||| ||||||||||||| Sbjct: 134295 ccatggcgctcaagtgcgccgtggagctcggcatccc 134259
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| ||||||||| ||||||||||||| Sbjct: 33915 ccatggcgctcaagtgcgccgtggagctcggcatccc 33879
>gb|AC121824.2| Mus musculus BAC clone RP23-467P15 from 18, complete sequence Length = 195027 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 573 tggctgcccatgaccatttggggat 597 ||||| ||||||||||||||||||| Sbjct: 28463 tggcttcccatgaccatttggggat 28439
>dbj|AB225018.1| Aspergillus oryzae cDNA, contig sequence: AoEST1869 Length = 1175 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 atatacaacgcaatggcaact 49 ||||||||||||||||||||| Sbjct: 262 atatacaacgcaatggcaact 282
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 atatacaacgcaatggcaact 49 ||||||||||||||||||||| Sbjct: 535278 atatacaacgcaatggcaact 535298
>dbj|AK161182.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832408G11 product:erythrocyte protein band 4.1-like 4a, full insert sequence Length = 3778 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 573 tggctgcccatgaccatttggggat 597 ||||| ||||||||||||||||||| Sbjct: 1864 tggcttcccatgaccatttggggat 1888
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 780 tcgctggtgacctattccatg 800 ||||||||||||||||||||| Sbjct: 2863338 tcgctggtgacctattccatg 2863358
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| |||||||| | ||||||||||||| Sbjct: 9845410 ccatggcgctcaagtgcgccgccgagctcggcatccc 9845374
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| |||||||| | ||||||||||||| Sbjct: 135652 ccatggcgctcaagtgcgccgccgagctcggcatccc 135616
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 ||||||| |||| |||||||| | ||||||||||||| Sbjct: 42045 ccatggcgctcaagtgcgccgccgagctcggcatccc 42009
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 138 ccatggcactcaggtgcgccgtccagctcggcatccc 174 |||| ||||||||||||||||| |||| |||||||| Sbjct: 88993 ccatagcactcaggtgcgccgtagagcttggcatccc 88957
>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19, complete sequence Length = 230267 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 caccatttgaagatgttcatg 503 ||||||||||||||||||||| Sbjct: 209463 caccatttgaagatgttcatg 209483
>gb|AC127366.4| Mus musculus BAC clone RP23-10E9 from 8, complete sequence Length = 177375 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1249 agtataagtagctaagtgata 1269 ||||||||||||||||||||| Sbjct: 54434 agtataagtagctaagtgata 54454 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 215,532,138 Number of extensions: 10563822 Number of successful extensions: 195364 Number of sequences better than 10.0: 46 Number of HSP's gapped: 195352 Number of HSP's successfully gapped: 92 Length of query: 1358 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1335 Effective length of database: 18,503,978,556 Effective search space: 24702811372260 Effective search space used: 24702811372260 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
