ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf26b08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104959:Os03g0118100 | 53 | 7e-07 | 2 | AK072029:Os03g0118100 | 53 | 7e-07 | 3 | AK106649:Os03g0260600 | 33 | 0.42 | 4 | AK063330:Os02g0143100 | 30 | 4.6 | 5 | Os05g0197700:Os05g0197700 | 29 | 7.9 |
|---|
>AK104959:Os03g0118100 | Length = 454 Score = 52.8 bits (125), Expect = 7e-07 Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 41/242 (16%) Frame = +3 Query: 540 LSPVSVMDFLSQXXXXXXXXXXXXXXXXXXXTASPTFQRSIANIRRASQELLQKIRQFEQ 719 LSPVSV+DF SP+FQ+ +A ++R+ ELL KIR+ E Sbjct: 206 LSPVSVLDF--------PFDDDDGEEGSDAGMCSPSFQQCLAELQRSKAELLHKIRRLEG 257 Query: 720 LGD----LDISXXXXXXXXXXXXSYNMAETESTADS----------------------DN 821 L +D+ N T S+ D+ + Sbjct: 258 LTQVVVPVDLEAQFTESDSSERTHLNANSTSSSDDTATTAPTTPRQCTDDQDVVNHGEEE 317 Query: 822 ASAQGILDLLEASSSGSIHCFQKLLVDFFCD---------DKTPRNLGRRKALLETAQAW 974 +L L S + + LL+DFF + P N ALL A W Sbjct: 318 EEEHSLLARLLESVVVTDEVSEWLLLDFFAEGVDRLRSSASSCPLNDCEEAALLRAAGDW 377 Query: 975 L--DGQNCSLGPI----WAVVKAEIEPIQRWRCFGDDEKKLLVADLESDIISLLVGELVD 1136 GQ +G + WA V A++E +RW C ++E+ D+ +++ L++ LVD Sbjct: 378 ARGAGQRWGVGDVVFSGWAAV-ADMERSRRWMCVAEEER-----DVGAEVDGLVMDALVD 431 Query: 1137 EL 1142 EL Sbjct: 432 EL 433
>AK072029:Os03g0118100 | Length = 454 Score = 52.8 bits (125), Expect = 7e-07 Identities = 61/242 (25%), Positives = 93/242 (38%), Gaps = 41/242 (16%) Frame = +3 Query: 540 LSPVSVMDFLSQXXXXXXXXXXXXXXXXXXXTASPTFQRSIANIRRASQELLQKIRQFEQ 719 LSPVSV+DF SP+FQ+ +A ++R+ ELL KIR+ E Sbjct: 206 LSPVSVLDF--------PFDDDDGEEGSDAGMCSPSFQQCLAELQRSKAELLHKIRRLEG 257 Query: 720 LGD----LDISXXXXXXXXXXXXSYNMAETESTADS----------------------DN 821 L +D+ N T S+ D+ + Sbjct: 258 LTQVVVPVDLEAQFTESDSSERTHLNANSTSSSDDTATTAPTTPRQCTDDQDVVNHGEEE 317 Query: 822 ASAQGILDLLEASSSGSIHCFQKLLVDFFCD---------DKTPRNLGRRKALLETAQAW 974 +L L S + + LL+DFF + P N ALL A W Sbjct: 318 EEEHSLLARLLESVVVTDEVSEWLLLDFFAEGVDRLRSSASSCPLNDCEEAALLRAAGDW 377 Query: 975 L--DGQNCSLGPI----WAVVKAEIEPIQRWRCFGDDEKKLLVADLESDIISLLVGELVD 1136 GQ +G + WA V A++E +RW C ++E+ D+ +++ L++ LVD Sbjct: 378 ARGAGQRWGVGDVVFSGWAAV-ADMERSRRWMCVAEEER-----DVGAEVDGLVMDALVD 431 Query: 1137 EL 1142 EL Sbjct: 432 EL 433
>AK106649:Os03g0260600 | Length = 409 Score = 33.5 bits (75), Expect = 0.42 Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 2/80 (2%) Frame = -2 Query: 1074 SFHHPRNISTVGSAQSPPSPLPKLVLMNNFAHPTMPGPSPTMPFFDLDFSGFYRRKRNQ- 898 + HH N+ G QSP PL P P P P PF F+ FY R+ Q Sbjct: 91 AIHHHHNLGGGGGQQSPFFPL---------LPPLPPQPPPPPPF----FADFYARRALQY 137 Query: 897 -LEASGSSGWTPRSLLLGGL 841 + SG + + L LGGL Sbjct: 138 AYDHSGGASSSSDPLGLGGL 157
>AK063330:Os02g0143100 | Length = 423 Score = 30.0 bits (66), Expect = 4.6 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%) Frame = +1 Query: 1048 GDVSGMMKRSY*LLILRVTSSRCWSENWLTSYIDRWQREDD-----FLKLLLNMEIDGPS 1212 GD G R++ + R+ S+C SE WL + + W+ E D L LN + + P Sbjct: 343 GDKQGKKYRAW---VDRLVVSQCGSEGWLVRF-NLWELEGDVWSCCLTSLALNAKPETPE 398 Query: 1213 NFVL 1224 FV+ Sbjct: 399 GFVV 402
>Os05g0197700:Os05g0197700 | Length = 1542 Score = 29.3 bits (64), Expect = 7.9 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 13/79 (16%) Frame = -2 Query: 1149 VNITRQPILRPTTR*CHSQDQQLVTSFHHP------RNISTVGSAQSP------PSPLPK 1006 + TR+P + PTT+ + +V P R +ST G SP PSP P Sbjct: 863 IGATRRPAVAPTTQ---TASSPMVHGLERPPPCSPTRPVSTPGGPSSPDSRLGPPSPTPA 919 Query: 1005 LV-LMNNFAHPTMPGPSPT 952 L+ + P GP+P+ Sbjct: 920 LIGPASTSPGPPSAGPAPS 938 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,427,915 Number of extensions: 923237 Number of successful extensions: 2717 Number of sequences better than 10.0: 5 Number of HSP's gapped: 2714 Number of HSP's successfully gapped: 5 Length of query: 515 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 410 Effective length of database: 11,195,550 Effective search space: 4590175500 Effective search space used: 4590175500 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
